Search of human proteins with 50593002

Search of human proteins with 50593002

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50593002 small nuclear ribonucleoprotein polypeptide A'
[Homo sapiens]
         (255 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50593002 small nuclear ribonucleoprotein polypeptide A' [Homo...   500   e-142
gi|239754500 PREDICTED: Leucine-rich repeat-containing protein E...    61   8e-10
gi|239749060 PREDICTED: Leucine-rich repeat-containing protein E...    61   8e-10
gi|239743086 PREDICTED: Leucine-rich repeat-containing protein E...    61   8e-10
gi|239508737 PREDICTED: Leucine-rich repeat-containing protein E...    61   8e-10
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  61   8e-10
gi|206725447 leucine rich repeat containing 23 isoform a [Homo s...    59   3e-09
gi|42542396 leucine rich repeat containing 23 isoform a [Homo sa...    59   3e-09
gi|194272228 leucine rich repeat containing 48 isoform b [Homo s...    58   7e-09
gi|194272226 leucine rich repeat containing 48 isoform b [Homo s...    58   7e-09
gi|194272224 leucine rich repeat containing 48 isoform a [Homo s...    58   7e-09
gi|194272222 leucine rich repeat containing 48 isoform a [Homo s...    58   7e-09
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami...    57   1e-08
gi|14042939 chromosome 10 open reading frame 11 [Homo sapiens]         57   1e-08
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    56   3e-08
gi|21389483 leucine-rich repeats and guanylate kinase domain con...    56   3e-08
gi|31377705 centrosomal protein 97kDa [Homo sapiens]                   56   3e-08
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    55   5e-08
gi|239752518 PREDICTED: similar to leucine rich repeat containin...    55   5e-08
gi|55743114 leucine rich repeat containing 49 [Homo sapiens]           55   5e-08
gi|31621309 leucine rich repeat containing 6 [Homo sapiens]            54   2e-07
gi|4506013 protein phosphatase 1, regulatory subunit 7 [Homo sap...    51   1e-06
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam...    50   2e-06
gi|157674358 leucine rich repeat containing 50 [Homo sapiens]          48   9e-06
gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear...    47   2e-05
gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear...    47   2e-05
gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens]           45   5e-05
gi|21687175 leucine rich transmembrane and 0-methyltransferase d...    45   5e-05
gi|218931217 leucine rich repeat containing 61 [Homo sapiens]          45   5e-05
gi|13027616 leucine rich repeat containing 61 [Homo sapiens]           45   5e-05

>gi|50593002 small nuclear ribonucleoprotein polypeptide A' [Homo
           sapiens]
          Length = 255

 Score =  500 bits (1287), Expect = e-142
 Identities = 255/255 (100%), Positives = 255/255 (100%)

Query: 1   MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
           MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF
Sbjct: 1   MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60

Query: 61  PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120
           PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI
Sbjct: 61  PLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSI 120

Query: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180
           LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT
Sbjct: 121 LRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKT 180

Query: 181 FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTD 240
           FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTD
Sbjct: 181 FNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGLLQSGQIPGRERRSGPTD 240

Query: 241 DGEEEMEEDTVTNGS 255
           DGEEEMEEDTVTNGS
Sbjct: 241 DGEEEMEEDTVTNGS 255


>gi|239754500 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 61.2 bits (147), Expect = 8e-10
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 41  LDQFDAIDFSDNEIRKLDGFPLLRR---LKTLLVNNNRICRIGEGLDQALPCLTELILTN 97
           L +F  + +      KL G   L R   L  L +NNN I  I EGL   LP L  L+L +
Sbjct: 112 LSRFKKLKYLWLHHNKLHGITFLTRNYCLTELYLNNNAIFEI-EGLHY-LPSLHILLLHH 169

Query: 98  NSLVEL-GDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQ 156
           N L  +   +  L  + +L  LS+ +NP+     YRLY+IY +P V +LD  +V  KER+
Sbjct: 170 NELTNIDATVKELKGMLNLKILSLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERR 229

Query: 157 EAEKMFKGKRGAQLAKDIA 175
               +F  K+ A + + IA
Sbjct: 230 SMITIFNHKK-AHIVQSIA 247


>gi|239749060 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 61.2 bits (147), Expect = 8e-10
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 41  LDQFDAIDFSDNEIRKLDGFPLLRR---LKTLLVNNNRICRIGEGLDQALPCLTELILTN 97
           L +F  + +      KL G   L R   L  L +NNN I  I EGL   LP L  L+L +
Sbjct: 112 LSRFKKLKYLWLHHNKLHGITFLTRNYCLTELYLNNNAIFEI-EGLHY-LPSLHILLLHH 169

Query: 98  NSLVEL-GDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQ 156
           N L  +   +  L  + +L  LS+ +NP+     YRLY+IY +P V +LD  +V  KER+
Sbjct: 170 NELTNIDATVKELKGMLNLKILSLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERR 229

Query: 157 EAEKMFKGKRGAQLAKDIA 175
               +F  K+ A + + IA
Sbjct: 230 SMITIFNHKK-AHIVQSIA 247


>gi|239743086 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 61.2 bits (147), Expect = 8e-10
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 41  LDQFDAIDFSDNEIRKLDGFPLLRR---LKTLLVNNNRICRIGEGLDQALPCLTELILTN 97
           L +F  + +      KL G   L R   L  L +NNN I  I EGL   LP L  L+L +
Sbjct: 112 LSRFKKLKYLWLHHNKLHGITFLTRNYCLTELYLNNNAIFEI-EGLHY-LPSLHILLLHH 169

Query: 98  NSLVEL-GDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQ 156
           N L  +   +  L  + +L  LS+ +NP+     YRLY+IY +P V +LD  +V  KER+
Sbjct: 170 NELTNIDATVKELKGMLNLKILSLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERR 229

Query: 157 EAEKMFKGKRGAQLAKDIA 175
               +F  K+ A + + IA
Sbjct: 230 SMITIFNHKK-AHIVQSIA 247


>gi|239508737 PREDICTED: Leucine-rich repeat-containing protein
           ENSP00000371558 [Homo sapiens]
          Length = 336

 Score = 61.2 bits (147), Expect = 8e-10
 Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 7/139 (5%)

Query: 41  LDQFDAIDFSDNEIRKLDGFPLLRR---LKTLLVNNNRICRIGEGLDQALPCLTELILTN 97
           L +F  + +      KL G   L R   L  L +NNN I  I EGL   LP L  L+L +
Sbjct: 112 LSRFKKLKYLWLHHNKLHGITFLTRNYCLTELYLNNNAIFEI-EGLHY-LPSLHILLLHH 169

Query: 98  NSLVEL-GDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQ 156
           N L  +   +  L  + +L  LS+ +NP+     YRLY+IY +P V +LD  +V  KER+
Sbjct: 170 NELTNIDATVKELKGMLNLKILSLYQNPLCQYNLYRLYIIYHLPGVELLDRNQVTEKERR 229

Query: 157 EAEKMFKGKRGAQLAKDIA 175
               +F  K+ A + + IA
Sbjct: 230 SMITIFNHKK-AHIVQSIA 247


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 61.2 bits (147), Expect = 8e-10
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 1/154 (0%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           L+L    I  IE L   L +   ++ S N+I K++G   +  L+ L +  N I  I   L
Sbjct: 130 LNLSYNLIGKIEKLDKLL-KLRELNLSYNKISKIEGIENMCNLQKLNLAGNEIEHIPVWL 188

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVR 143
            + L  L  L L  N +  L D+  L  L+ L  L ++ NPV    HY  + I+ +  + 
Sbjct: 189 GKKLKSLRVLNLKGNKISSLQDISKLKPLQDLISLILVENPVVTLPHYLQFTIFHLRSLE 248

Query: 144 VLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARR 177
            L+ Q V  ++RQEA + F  +   +L +D+ ++
Sbjct: 249 SLEGQPVTTQDRQEAFERFSLEEVERLERDLEKK 282


>gi|206725447 leucine rich repeat containing 23 isoform a [Homo
           sapiens]
          Length = 343

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           ++LRG ++     LG  L +   +  + N ++K++G   L  L TL + +N+I  +  G 
Sbjct: 184 VELRGNQLE--STLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLS-GF 240

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVR 143
            + +  L  L L  N +  LG+L  L  L  L  L +L NP T++  YR   + ++P + 
Sbjct: 241 SREMKSLQYLNLRGNMVANLGELAKLRDLPKLRALVLLDNPCTDETSYRQEALVQMPYLE 300

Query: 144 VLDFQKVKLKERQEAE 159
            LD +  + +ER EA+
Sbjct: 301 RLDKEFYEEEERAEAD 316


>gi|42542396 leucine rich repeat containing 23 isoform a [Homo
           sapiens]
          Length = 343

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           ++LRG ++     LG  L +   +  + N ++K++G   L  L TL + +N+I  +  G 
Sbjct: 184 VELRGNQLE--STLGINLPKLKNLYLAQNMLKKVEGLEDLSNLTTLHLRDNQIDTLS-GF 240

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVR 143
            + +  L  L L  N +  LG+L  L  L  L  L +L NP T++  YR   + ++P + 
Sbjct: 241 SREMKSLQYLNLRGNMVANLGELAKLRDLPKLRALVLLDNPCTDETSYRQEALVQMPYLE 300

Query: 144 VLDFQKVKLKERQEAE 159
            LD +  + +ER EA+
Sbjct: 301 RLDKEFYEEEERAEAD 316


>gi|194272228 leucine rich repeat containing 48 isoform b [Homo
           sapiens]
          Length = 457

 Score = 58.2 bits (139), Expect = 7e-09
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 22  RELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGE 81
           R+L L    I  IE L   L     +D S N I  ++G   L  L+ L + NNRI +I +
Sbjct: 68  RKLQLDNNIIEKIEGL-ENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKI-D 125

Query: 82  GLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQ 141
            LD AL  L  L L NN +  + ++  L   K L  LS+ RNP++  + Y++++   +P 
Sbjct: 126 SLD-ALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFICAYLPD 184

Query: 142 VRVLDFQKVKLKERQEAE 159
           +  LD++++    ++ AE
Sbjct: 185 LMYLDYRRIDDHTKKLAE 202


>gi|194272226 leucine rich repeat containing 48 isoform b [Homo
           sapiens]
          Length = 457

 Score = 58.2 bits (139), Expect = 7e-09
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 22  RELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGE 81
           R+L L    I  IE L   L     +D S N I  ++G   L  L+ L + NNRI +I +
Sbjct: 68  RKLQLDNNIIEKIEGL-ENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKI-D 125

Query: 82  GLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQ 141
            LD AL  L  L L NN +  + ++  L   K L  LS+ RNP++  + Y++++   +P 
Sbjct: 126 SLD-ALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFICAYLPD 184

Query: 142 VRVLDFQKVKLKERQEAE 159
           +  LD++++    ++ AE
Sbjct: 185 LMYLDYRRIDDHTKKLAE 202


>gi|194272224 leucine rich repeat containing 48 isoform a [Homo
           sapiens]
          Length = 523

 Score = 58.2 bits (139), Expect = 7e-09
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 22  RELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGE 81
           R+L L    I  IE L   L     +D S N I  ++G   L  L+ L + NNRI +I +
Sbjct: 68  RKLQLDNNIIEKIEGL-ENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKI-D 125

Query: 82  GLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQ 141
            LD AL  L  L L NN +  + ++  L   K L  LS+ RNP++  + Y++++   +P 
Sbjct: 126 SLD-ALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFICAYLPD 184

Query: 142 VRVLDFQKVKLKERQEAE 159
           +  LD++++    ++ AE
Sbjct: 185 LMYLDYRRIDDHTKKLAE 202


>gi|194272222 leucine rich repeat containing 48 isoform a [Homo
           sapiens]
          Length = 523

 Score = 58.2 bits (139), Expect = 7e-09
 Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 22  RELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGE 81
           R+L L    I  IE L   L     +D S N I  ++G   L  L+ L + NNRI +I +
Sbjct: 68  RKLQLDNNIIEKIEGL-ENLAHLVWLDLSFNNIETIEGLDTLVNLEDLSLFNNRISKI-D 125

Query: 82  GLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQ 141
            LD AL  L  L L NN +  + ++  L   K L  LS+ RNP++  + Y++++   +P 
Sbjct: 126 SLD-ALVKLQVLSLGNNRIDNMMNIIYLRRFKCLRTLSLSRNPISEAEDYKMFICAYLPD 184

Query: 142 VRVLDFQKVKLKERQEAE 159
           +  LD++++    ++ AE
Sbjct: 185 LMYLDYRRIDDHTKKLAE 202


>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member E isoform 1 [Homo sapiens]
          Length = 268

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 12/250 (4%)

Query: 3   KLTAELIEQAAQ-YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFP 61
           K+  EL  ++ +  T  V D  L + G     IE L  T  + + +  ++ E+  L   P
Sbjct: 6   KINLELRNRSPEEVTELVLDNCLCVNGE----IEGLNDTFKELEFLSMANVELSSLARLP 61

Query: 62  LLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSIL 121
            L +L+ L +++N I    E L +  P LT L L+ N + +L  ++ L +LK+L  L + 
Sbjct: 62  SLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLDLF 121

Query: 122 RNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAKDIARRSKTF 181
              +TN + YR  +   + Q+  LD    +  E  ++E+    + G +   D        
Sbjct: 122 NCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEE-DDEDGDE--DDEEEEENEA 178

Query: 182 NPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGL--LQSGQIPGRERRSGPT 239
            P  G   ++++      D +  ++     S L E E   GL  L   +I   E      
Sbjct: 179 GPPEGYEEEEEEEEEEDEDEDEDEDEA--GSELGEGEEEVGLSYLMKEEIQDEEDDDDYV 236

Query: 240 DDGEEEMEED 249
           ++GEEE EE+
Sbjct: 237 EEGEEEEEEE 246


>gi|14042939 chromosome 10 open reading frame 11 [Homo sapiens]
          Length = 198

 Score = 57.4 bits (137), Expect = 1e-08
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 18/119 (15%)

Query: 55  RKLDGFPLLRRLKTLLVNNNRICRIGEGLD-QALPCLTELILTNNSLVELGDL-DPLASL 112
           R L+G    R L+ L+++NN++   G+ L    LP L  L L  N + +L +L D LA +
Sbjct: 16  RSLEGLSAFRSLEELILDNNQL---GDDLVLPGLPRLHTLTLNKNRITDLENLLDHLAEV 72

Query: 113 K-SLTYLSILRNPVT------------NKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158
             +L YLS+L N               + K YR +V+YK+P ++ LD QKV  +ER+EA
Sbjct: 73  TPALEYLSLLGNVACPNELVSLEKDEEDYKRYRCFVLYKLPNLKFLDAQKVTRQEREEA 131


>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member B [Homo sapiens]
          Length = 251

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 42/129 (32%), Positives = 61/129 (47%)

Query: 18  AVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRIC 77
           AVR+  LD        IE L A     + +   +  +  +   P L +LK L ++ NRI 
Sbjct: 18  AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISVSNLPKLPKLKKLELSENRIF 77

Query: 78  RIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIY 137
              + L + LP LT L L+ N L ++  L+PL  L+ L  L +    VTN   YR  V  
Sbjct: 78  GGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFK 137

Query: 138 KVPQVRVLD 146
            +PQ+  LD
Sbjct: 138 LLPQLTYLD 146


>gi|21389483 leucine-rich repeats and guanylate kinase domain
           containing [Homo sapiens]
          Length = 825

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 38/135 (28%), Positives = 72/135 (53%), Gaps = 4/135 (2%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           L L   KI  I  L         +  S+N+I  + G   L+ L+ L +++N+I  + +GL
Sbjct: 242 LSLANNKITTINGLNKL--PIKILCLSNNQIEMITGLEDLKALQNLDLSHNQISSL-QGL 298

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVR 143
           +     L  + L +N + EL +++ + +L  L  L++L NP+  K  Y  +VI+ + ++ 
Sbjct: 299 ENH-DLLEVINLEDNKIAELREIEYIKNLPILRVLNLLENPIQEKSEYWFFVIFMLLRLT 357

Query: 144 VLDFQKVKLKERQEA 158
            LD +K+K++E+  A
Sbjct: 358 ELDQKKIKVEEKVSA 372


>gi|31377705 centrosomal protein 97kDa [Homo sapiens]
          Length = 865

 Score = 56.2 bits (134), Expect = 3e-08
 Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 7/150 (4%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           L+L G  +  +E + +       +D SDN I ++     L  LKTLL++ N I  +    
Sbjct: 107 LNLAGNNLKAMEQINSCT-ALQHLDLSDNNISQIGDLSKLVSLKTLLLHGNIITSLRMAP 165

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKK------HYRLYVIY 137
                 L  L L  N + +L ++  LASL  L  LSI+ NP            YR Y++ 
Sbjct: 166 AYLPRSLAILSLAENEIRDLNEISFLASLTELEQLSIMNNPCVMATPSIPGFDYRPYIVS 225

Query: 138 KVPQVRVLDFQKVKLKERQEAEKMFKGKRG 167
               +RVLD   +  KE  +AE ++   +G
Sbjct: 226 WCLNLRVLDGYVISQKESLKAEWLYSQGKG 255


>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member A [Homo sapiens]
          Length = 249

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 42  DQFDAIDFSDN---EIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNN 98
           D+F+ ++F       +  +   P L +LK L +++NR+    E L +  P LT L L+ N
Sbjct: 39  DEFEELEFLSTINVGLTSIANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGN 98

Query: 99  SLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLD 146
            + +L  ++PL  L++L  L +    VTN   YR  V   +PQ+  LD
Sbjct: 99  KIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLD 146


>gi|239752518 PREDICTED: similar to leucine rich repeat containing
           50, partial [Homo sapiens]
          Length = 489

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 3/140 (2%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           LDL G +I  IEN+   L +   ++ + N +  +D    L  L  L + +N+I  + + +
Sbjct: 8   LDLHGNQITKIENINH-LCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRD-V 65

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVR 143
           D  LPCL  L L+ N++     +  LA   SL+ ++   NP+  +  Y+  V+  + Q+R
Sbjct: 66  DN-LPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHTVLQNMMQLR 124

Query: 144 VLDFQKVKLKERQEAEKMFK 163
            LD +++  +ER+ A  + K
Sbjct: 125 QLDMKRITEEERRMASVLAK 144


>gi|55743114 leucine rich repeat containing 49 [Homo sapiens]
          Length = 686

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 40/140 (28%), Positives = 73/140 (52%), Gaps = 3/140 (2%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           LDL G +I  IEN+   L +   ++ + N +  +D    L  L  L + +N+I  + + +
Sbjct: 183 LDLHGNQITKIENINH-LCELRVLNLARNFLSHVDNLNGLDSLTELNLRHNQITFVRD-V 240

Query: 84  DQALPCLTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVR 143
           D  LPCL  L L+ N++     +  LA   SL+ ++   NP+  +  Y+  V+  + Q+R
Sbjct: 241 DN-LPCLQHLFLSFNNISSFDSVSCLADSSSLSDITFDGNPIAQESWYKHTVLQNMMQLR 299

Query: 144 VLDFQKVKLKERQEAEKMFK 163
            LD +++  +ER+ A  + K
Sbjct: 300 QLDMKRITEEERRMASVLAK 319


>gi|31621309 leucine rich repeat containing 6 [Homo sapiens]
          Length = 466

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)

Query: 4   LTAELIEQAAQYTNAV--RDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFP 61
           +T +LI + A++ + V     EL L   +I  +E++         +   +N I K++   
Sbjct: 4   ITEDLIRRNAEHNDCVIFSLEELSLHQQEIERLEHIDKWCRDLKILYLQNNLIGKIENVS 63

Query: 62  LLRRLKTLLVNNNRICRIG--EGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTYLS 119
            L++L+ L +  N I +I   EG ++    L +L LT N + EL  +  L     L  L 
Sbjct: 64  KLKKLEYLNLALNNIEKIENLEGCEE----LAKLDLTVNFIGELSSIKNLQHNIHLKELF 119

Query: 120 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEA 158
           ++ NP  +  HYR +V+  +PQ++ LD ++++  ER +A
Sbjct: 120 LMGNPCASFDHYREFVVATLPQLKWLDGKEIEPSERIKA 158


>gi|4506013 protein phosphatase 1, regulatory subunit 7 [Homo
           sapiens]
          Length = 360

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 22  RELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGE 81
           RELDL   +I  IENL A L + + +D S N +R ++G   L RLK L + NN+I +I E
Sbjct: 123 RELDLYDNQIKKIENLEA-LTELEILDISFNLLRNIEGVDKLTRLKKLFLVNNKISKI-E 180

Query: 82  GLDQALPCLTELILTNNSLVELGDLDPLASLKSL 115
            L   L  L  L L +N +  + ++D L +L+SL
Sbjct: 181 NLSN-LHQLQMLELGSNRIRAIENIDTLTNLESL 213



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 43/167 (25%), Positives = 67/167 (40%), Gaps = 23/167 (13%)

Query: 1   MVKLTAELIEQAAQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGF 60
           M++L +  I              L L   KI  ++NL A L     +    N + K++G 
Sbjct: 190 MLELGSNRIRAIENIDTLTNLESLFLGKNKITKLQNLDA-LTNLTVLSMQSNRLTKIEGL 248

Query: 61  PLLRRLKTLLVNNNRICRIGEGLDQA---------------------LPCLTELILTNNS 99
             L  L+ L +++N I  + EGL+                       L  L E  + +N 
Sbjct: 249 QNLVNLRELYLSHNGI-EVIEGLENNNKLTMLDIASNRIKKIENISHLTELQEFWMNDNL 307

Query: 100 LVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLD 146
           L    DLD L   +SL  + + RNP+     YR  V+  +P VR +D
Sbjct: 308 LESWSDLDELKGARSLETVYLERNPLQKDPQYRRKVMLALPSVRQID 354



 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 4   LTAELIEQAAQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKLDGFPL 62
           + A+L EQ+ +     R  E     +++PV +E +    D  D +D +   I K++GF +
Sbjct: 39  IVADLSEQSLK-DGEERGEEDPEEEHELPVDMETINLDRDAED-VDLNHYRIGKIEGFEV 96

Query: 63  LRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASLKSLTY-LSIL 121
           L+++KTL +  N I  I E L++ L  L EL L +N + ++ +L+ L  L+ L    ++L
Sbjct: 97  LKKVKTLCLRQNLIKCI-ENLEE-LQSLRELDLYDNQIKKIENLEALTELEILDISFNLL 154

Query: 122 RNPVTNKKHYRLYVIYKV 139
           RN     K  RL  ++ V
Sbjct: 155 RNIEGVDKLTRLKKLFLV 172


>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
           family, member E isoform 3 [Homo sapiens]
          Length = 220

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 7/199 (3%)

Query: 53  EIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTELILTNNSLVELGDLDPLASL 112
           E+  L   P L +L+ L +++N I    E L +  P LT L L+ N + +L  ++ L +L
Sbjct: 5   ELSSLARLPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNL 64

Query: 113 KSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGKRGAQLAK 172
           K+L  L +    +TN + YR  +   + Q+  LD    +  E  ++E+    + G +   
Sbjct: 65  KNLKSLDLFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEE-DDEDGDE--D 121

Query: 173 DIARRSKTFNPGAGLPTDKKKGGPSPGDVEAIKNAIANASTLAEVERLKGL--LQSGQIP 230
           D         P  G   ++++      D +  ++     S L E E   GL  L   +I 
Sbjct: 122 DEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEA--GSELGEGEEEVGLSYLMKEEIQ 179

Query: 231 GRERRSGPTDDGEEEMEED 249
             E      ++GEEE EE+
Sbjct: 180 DEEDDDDYVEEGEEEEEEE 198


>gi|157674358 leucine rich repeat containing 50 [Homo sapiens]
          Length = 725

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)

Query: 34  IENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPC--LT 91
           IENL   L + DA++ S+N I+ ++    L  L TL + +N +  + E +     C  L 
Sbjct: 166 IENL-EPLQKLDALNLSNNYIKTIENLSCLPVLNTLQMAHNHLETV-EDIQHLQECLRLC 223

Query: 92  ELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKV 150
            L L++N L +   L  L S+  L  L+++ NPV  +  +YR  V  ++  +  LD + V
Sbjct: 224 VLDLSHNKLSDPEILSILESMPDLRVLNLMGNPVIRQIPNYRRTVTVRLKHLTYLDDRPV 283

Query: 151 KLKERQEAEKMFKGKRGAQ 169
             K+R  AE   +G   A+
Sbjct: 284 FPKDRACAEAWARGGYAAE 302


>gi|239756368 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 34/131 (25%), Positives = 59/131 (45%)

Query: 34  IENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTEL 93
           IE+L A     + +   +  +  +   P L +LK  +++ NRI        + LP LT L
Sbjct: 54  IESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHL 113

Query: 94  ILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153
            L+   L ++  L+PL  L+ L  L +    V N   Y+  V   +PQ+  LD    + +
Sbjct: 114 NLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQ 173

Query: 154 ERQEAEKMFKG 164
           E  +++    G
Sbjct: 174 EAPDSDAQVDG 184


>gi|239750893 PREDICTED: similar to acidic (leucine-rich) nuclear
           phosphoprotein 32 family, member B [Homo sapiens]
          Length = 272

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 34/131 (25%), Positives = 59/131 (45%)

Query: 34  IENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTEL 93
           IE+L A     + +   +  +  +   P L +LK  +++ NRI        + LP LT L
Sbjct: 54  IESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHL 113

Query: 94  ILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153
            L+   L ++  L+PL  L+ L  L +    V N   Y+  V   +PQ+  LD    + +
Sbjct: 114 NLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLDTYDPEDQ 173

Query: 154 ERQEAEKMFKG 164
           E  +++    G
Sbjct: 174 EAPDSDAQVDG 184


>gi|239745256 PREDICTED: similar to hCG1791241 [Homo sapiens]
          Length = 450

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 32/113 (28%), Positives = 52/113 (46%)

Query: 34  IENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGLDQALPCLTEL 93
           IE+L A     + +   +  +  +   P L +LK  +++ NRI        + LP LT L
Sbjct: 54  IESLTAEFVNLEFLRLINVGLISISNLPKLPKLKKFVLSENRIFGGLNMSAEKLPNLTHL 113

Query: 94  ILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLD 146
            L+   L ++  L+PL  L+ L  L +    V N   Y+  V   +PQ+  LD
Sbjct: 114 NLSGKKLKDISTLEPLKKLECLKSLDLFNCEVINLNDYQESVFKLLPQLTCLD 166


>gi|21687175 leucine rich transmembrane and 0-methyltransferase
           domain containing isoform 1 [Homo sapiens]
          Length = 192

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 25/70 (35%), Positives = 39/70 (55%)

Query: 90  LTELILTNNSLVELGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQK 149
           L+ L L  NS+  LG+++ LA L  L  L++  NP+  +K YR YV+  + ++   DF  
Sbjct: 104 LSVLYLHGNSIQRLGEVNKLAVLPRLRSLTLHGNPMEEEKGYRQYVLCTLSRITTFDFSG 163

Query: 150 VKLKERQEAE 159
           V   +R  AE
Sbjct: 164 VTKADRTTAE 173


>gi|218931217 leucine rich repeat containing 61 [Homo sapiens]
          Length = 259

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           L LRG  +  +  LG  L   + +D S N +  L     LR+L  L V+NNR+     GL
Sbjct: 36  LKLRGLGLADLGCLGECLG-LEWLDLSGNALTHLGPLASLRQLAVLNVSNNRL----TGL 90

Query: 84  DQALPC--LTELILTNNSLVELGDLDPLASLKSLTYLSI------LRNPVTNKKHYRLYV 135
           +    C  L  L    N L   G L  LA L  L YL +      L NP+     Y   V
Sbjct: 91  EPLATCENLQSLNAAGNLLATPGQLQCLAGLPCLEYLRLRDPLARLSNPLCANPSYWAAV 150

Query: 136 IYKVPQVRVLDFQKV 150
              +P ++V+D ++V
Sbjct: 151 RELLPGLKVIDGERV 165


>gi|13027616 leucine rich repeat containing 61 [Homo sapiens]
          Length = 259

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 13/135 (9%)

Query: 24  LDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVNNNRICRIGEGL 83
           L LRG  +  +  LG  L   + +D S N +  L     LR+L  L V+NNR+     GL
Sbjct: 36  LKLRGLGLADLGCLGECLG-LEWLDLSGNALTHLGPLASLRQLAVLNVSNNRL----TGL 90

Query: 84  DQALPC--LTELILTNNSLVELGDLDPLASLKSLTYLSI------LRNPVTNKKHYRLYV 135
           +    C  L  L    N L   G L  LA L  L YL +      L NP+     Y   V
Sbjct: 91  EPLATCENLQSLNAAGNLLATPGQLQCLAGLPCLEYLRLRDPLARLSNPLCANPSYWAAV 150

Query: 136 IYKVPQVRVLDFQKV 150
              +P ++V+D ++V
Sbjct: 151 RELLPGLKVIDGERV 165


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.136    0.375 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,289,565
Number of Sequences: 37866
Number of extensions: 413569
Number of successful extensions: 1404
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 1185
Number of HSP's gapped (non-prelim): 296
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.