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Search of human proteins with 50540545
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50540545 Barkor [Homo sapiens]
(492 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50540545 Barkor [Homo sapiens] 992 0.0
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 50 5e-06
gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 42 0.001
gi|38044112 restin isoform b [Homo sapiens] 42 0.001
gi|4506751 restin isoform a [Homo sapiens] 42 0.001
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 42 0.001
gi|31982906 cingulin-like 1 [Homo sapiens] 41 0.002
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 40 0.004
gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 40 0.004
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 40 0.005
gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 40 0.006
gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 40 0.006
gi|221219020 NYD-SP11 protein [Homo sapiens] 39 0.008
gi|16262452 cingulin [Homo sapiens] 39 0.008
gi|62243374 MAD1-like 1 protein [Homo sapiens] 39 0.008
gi|62243369 MAD1-like 1 protein [Homo sapiens] 39 0.008
gi|62243332 MAD1-like 1 protein [Homo sapiens] 39 0.008
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 39 0.008
gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 39 0.008
gi|239745153 PREDICTED: similar to Putative golgin subfamily A m... 39 0.011
gi|239745127 PREDICTED: similar to Putative golgin subfamily A m... 39 0.011
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 39 0.011
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 39 0.014
gi|148746195 trichohyalin [Homo sapiens] 39 0.014
gi|46049114 M-phase phosphoprotein 1 [Homo sapiens] 39 0.014
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 39 0.014
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 39 0.014
gi|9257222 forkhead box O1 [Homo sapiens] 38 0.018
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 38 0.018
gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo sa... 38 0.018
>gi|50540545 Barkor [Homo sapiens]
Length = 492
Score = 992 bits (2564), Expect = 0.0
Identities = 492/492 (100%), Positives = 492/492 (100%)
Query: 1 MASPSGKGARALEAPGCGPRPLARDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQ 60
MASPSGKGARALEAPGCGPRPLARDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQ
Sbjct: 1 MASPSGKGARALEAPGCGPRPLARDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQ 60
Query: 61 SGDFVYFDGRDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI 120
SGDFVYFDGRDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI
Sbjct: 61 SGDFVYFDGRDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI 120
Query: 121 EQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKT 180
EQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKT
Sbjct: 121 EQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKT 180
Query: 181 IDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSKLAEA 240
IDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSKLAEA
Sbjct: 181 IDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSKLAEA 240
Query: 241 RRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQSNPA 300
RRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQSNPA
Sbjct: 241 RRTTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQSNPA 300
Query: 301 YTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNANILYLCF 360
YTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNANILYLCF
Sbjct: 301 YTISAALCYATQLVNILSHILDVNLPKKLCNSEFCGENLSKQKFTRAVKKLNANILYLCF 360
Query: 361 SQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVAGESDESG 420
SQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVAGESDESG
Sbjct: 361 SQHVNLDQLQPLHTLRNLMYLVSPSSEHLGRSGPFEVRADLEESMEFVDPGVAGESDESG 420
Query: 421 DERVSDEETDLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASSSAGGMISSAAAS 480
DERVSDEETDLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASSSAGGMISSAAAS
Sbjct: 421 DERVSDEETDLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASSSAGGMISSAAAS 480
Query: 481 VTSWFKAYTGHR 492
VTSWFKAYTGHR
Sbjct: 481 VTSWFKAYTGHR 492
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 50.1 bits (118), Expect = 5e-06
Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 21/249 (8%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEV-LKAMEGKWITDQLRWKIMSCKMRIEQLKQTIC 128
R+R+ DK +SRL+ K++ + E + +T++++ K+ E+ +
Sbjct: 926 RNRQEITDKDHTVSRLEEANSMLTKDIEILRRENEELTEKMKKAEEEYKLEKEEEISNL- 984
Query: 129 KGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKT------ID 182
K E N+E LKT+ N+ A+ K KI R DL +K+ ++
Sbjct: 985 KAAFEKNINTERTLKTQAVNKL----AEIMNRKDFKIDRKKANTQDLRKKEKENRKLQLE 1040
Query: 183 LRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSKLAEARR 242
L E+ + H EL + + E + R+ + S + +KL +
Sbjct: 1041 LNQEREKFNQMVVKHQKELNDMQAQLVE-ECAHRNELQMQLASKESDIEQLRAKLLDLSD 1099
Query: 243 TTYLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAY-----YSWVEEKKT---TQGPDM 294
+T ++ D+ +G+ S W+S+PN G+ Y Y V KK D
Sbjct: 1100 STSVASFPSADETDGNLPESRIEGWLSVPNRGNIKRYGWKKQYVVVSSKKILFYNDEQDK 1159
Query: 295 EQSNPAYTI 303
EQSNP+ +
Sbjct: 1160 EQSNPSMVL 1168
>gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo
sapiens]
Length = 570
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/126 (24%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI--EQLKQTI 127
R++E+ I ++E R + + + Q+E + EGK + + + KMR E++++
Sbjct: 442 REQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEKMRRQEEKIREQE 501
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK---KTIDLR 184
K E+ EK E +E+ +K++ + ++ E++EK+Q K+ EK + + LR
Sbjct: 502 KKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMREQEVRLR 561
Query: 185 SHYERL 190
E++
Sbjct: 562 QQEEKM 567
Score = 37.0 bits (84), Expect = 0.041
Identities = 28/128 (21%), Positives = 66/128 (51%), Gaps = 5/128 (3%)
Query: 72 RERFIDKKERLSRLKSKQEEFQ---KEVLKAME-GKWITDQLRWKIMSCKMRIEQLKQTI 127
+E+ +E+L ++S++ E Q KE+ + +E K + Q + + + + ++L+
Sbjct: 208 KEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLG-KELQSVS 266
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHY 187
K ++E+N +++ +K++ + ++ QE++EKIQ K+ + EK +
Sbjct: 267 AKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEREEKIQEQEEKIREQEEKMRRQEEMMW 326
Query: 188 ERLANLRR 195
E+ +RR
Sbjct: 327 EKEEKMRR 334
Score = 36.6 bits (83), Expect = 0.053
Identities = 33/160 (20%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R E +K+E++ R + E ++E ++ +E K + K+R ++ K+ +
Sbjct: 320 RQEEMMWEKEEKMRRQEEMMWE-KEEKIRELEEKMHEQE--------KIREQEEKRQEEE 370
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
E EK E K + +K+ + ++ +E++E +Q K+G+ EK E+
Sbjct: 371 KIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQEQ 430
Query: 190 LANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM 229
+RR ++ I E + +R+ ++ E + M
Sbjct: 431 EEKMRRQE-EKIREQEKKIREQEEKIREQEEMMQEQEEKM 469
Score = 33.9 bits (76), Expect = 0.35
Identities = 27/160 (16%), Positives = 79/160 (49%), Gaps = 7/160 (4%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R++E+ ++E+ +++ ++E+ +++ K E + + + K+ + ++ + ++ + +
Sbjct: 373 REQEK---RQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQE 429
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
E+M + E K +E+ +K+ + ++ +E++E +Q K+G+ K E+
Sbjct: 430 QEEKMRRQEE---KIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQ 486
Query: 190 LANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM 229
+RR ++ I E + +R+ ++ E + M
Sbjct: 487 EEKMRRQE-EKIREQEKKIREQEEKIREQEEMMQEQEEKM 525
Score = 32.3 bits (72), Expect = 1.0
Identities = 17/101 (16%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 68 DGRDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTI 127
+G+ E+ +E+ +++ ++E+ +++ K E + + + + ++ + ++ +
Sbjct: 473 EGKMCEQEAKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKM 532
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRH 168
C+ E+M++ E K + + +K+ + R ++++EK+Q H
Sbjct: 533 CEQEEKMQEQEE---KMRRQEEKMREQEVRLRQQEEKMQEH 570
Score = 30.0 bits (66), Expect = 5.0
Identities = 32/157 (20%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 76 IDKKERLSRLKSKQEEF---QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
+++ E +RL +QEE Q+E ++ E K + KI + ++ + ++ + + E
Sbjct: 273 VEENELWNRLNQQQEEKMWRQEEKIQEREEK--IQEQEEKIREQEEKMRRQEEMMWEKEE 330
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLAN 192
+M + E + + +EK ++L + H+++K + Q R+ E+K + E+ A
Sbjct: 331 KMRRQEEMMWEKEEKIREL--EEKMHEQEKIREQEEKRQ----EEEKIREQEKRQEQEAK 384
Query: 193 LRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM 229
+ R I E + +R+ ++ E + M
Sbjct: 385 MWRQE--------EKIREQEEKIREQEEMMQEQEEKM 413
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/165 (24%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 74 RFIDKKERLSRLKSKQEEFQKEVLKAMEGKW--------ITDQLRWKIMSCKMRIEQLKQ 125
+F +K ER +L +E+ + ++ + M+ + D+LR K + +E+L+
Sbjct: 862 KFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLK----ERDVEELQL 917
Query: 126 TICKGNEE---MEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK---- 178
+ K NE ++K+ E + E++Q+ A++H+E+K++++ RKL DL +K
Sbjct: 918 KLTKANENASFLQKSIEDMTVKAEQSQQ--EAAKKHEEEKKELE---RKLSDLEKKMETS 972
Query: 179 --KTIDLRSHYERLAN---LRRSHILE-LTSVIFPIEEVKTGVRD 217
+ +L++ YER + + IL+ L + E+ G R+
Sbjct: 973 HNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGARE 1017
Score = 33.1 bits (74), Expect = 0.59
Identities = 27/133 (20%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAME----GKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
D K+ ++L+++ + ++ LK +E K + K+ + IE LKQ + ++
Sbjct: 1065 DTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQ 1124
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLAN 192
++ E +K E+ + HQ+ +E+ N +L ++ ++++ ++ E A+
Sbjct: 1125 QLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKAS 1184
Query: 193 LRRSHILELTSVI 205
L++S + +TS +
Sbjct: 1185 LQKS--ISITSAL 1195
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 42.4 bits (98), Expect = 0.001
Identities = 40/165 (24%), Positives = 83/165 (50%), Gaps = 30/165 (18%)
Query: 74 RFIDKKERLSRLKSKQEEFQKEVLKAMEGKW--------ITDQLRWKIMSCKMRIEQLKQ 125
+F +K ER +L +E+ + ++ + M+ + D+LR K + +E+L+
Sbjct: 897 KFREKDEREEQLIKAKEKLENDIAEIMKMSGDNSSQLTKMNDELRLK----ERDVEELQL 952
Query: 126 TICKGNEE---MEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK---- 178
+ K NE ++K+ E + E++Q+ A++H+E+K++++ RKL DL +K
Sbjct: 953 KLTKANENASFLQKSIEDMTVKAEQSQQ--EAAKKHEEEKKELE---RKLSDLEKKMETS 1007
Query: 179 --KTIDLRSHYERLAN---LRRSHILE-LTSVIFPIEEVKTGVRD 217
+ +L++ YER + + IL+ L + E+ G R+
Sbjct: 1008 HNQCQELKARYERATSETKTKHEEILQNLQKTLLDTEDKLKGARE 1052
Score = 33.1 bits (74), Expect = 0.59
Identities = 27/133 (20%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAME----GKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
D K+ ++L+++ + ++ LK +E K + K+ + IE LKQ + ++
Sbjct: 1100 DTKQTNAKLQNELDTLKENNLKNVEELNKSKELLTVENQKMEEFRKEIETLKQAAAQKSQ 1159
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLAN 192
++ E +K E+ + HQ+ +E+ N +L ++ ++++ ++ E A+
Sbjct: 1160 QLSALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESKFIKDADEEKAS 1219
Query: 193 LRRSHILELTSVI 205
L++S + +TS +
Sbjct: 1220 LQKS--ISITSAL 1230
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 42.4 bits (98), Expect = 0.001
Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 21/223 (9%)
Query: 26 LVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSGDFVYFDGRDRERFIDKKERLSRL 85
L VDD EG ++ LC R AK GD + DK++ +L
Sbjct: 1031 LEQQVDDLEGSLEQEKK--LCMDLER----AKRKLEGDLKLAQESTMDTENDKQQLNEKL 1084
Query: 86 KSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTI-------CKGNEEMEKNS 138
K K+ E K + + + QL+ KI + RIE+L++ I K ++ S
Sbjct: 1085 KKKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLS 1144
Query: 139 EGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRSH- 197
L + E+ ++ E +K + +K+ +E+ T+ H A LR+ H
Sbjct: 1145 RELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEESTL---QHEATAAALRKKHA 1201
Query: 198 --ILELTSVIFPIEEVKTGV-RDPADVSSE-SDSAMTSSTVSK 236
+ EL I ++ VK + ++ +++ E +D A TVSK
Sbjct: 1202 DSVAELGEQIDSLQRVKQKLEKEKSELKMEINDLASNMETVSK 1244
Score = 32.0 bits (71), Expect = 1.3
Identities = 44/224 (19%), Positives = 94/224 (41%), Gaps = 32/224 (14%)
Query: 11 ALEAPGCGPRPLARDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSG-DFVYFDG 69
+LE G + ++L+D+ + + L+ + L NT ++ T +Q + + +
Sbjct: 1695 SLERTERGRKMAEQELLDASERVQLLHT--QNTSLINTKKKLETDISQIQGEMEDIVQEA 1752
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R+ E K+ ++ EE +KE + + + + + ++R+++ +Q K
Sbjct: 1753 RNAEE--KAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRLDEAEQLALK 1810
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
G K++ QKL +R + + + E Q+HN + LR H R
Sbjct: 1811 GG-------------KKQIQKLEARVRELESEVESEQKHN-------VEAVKGLRKHERR 1850
Query: 190 LANLR------RSHILELTSVIFPIE-EVKTGVRDPADVSSESD 226
+ L R +IL L ++ ++ +VK R + +S+
Sbjct: 1851 VKELTYQTEEDRKNILRLQDLVDKLQTKVKAYKRQAEEAEEQSN 1894
Score = 29.6 bits (65), Expect = 6.5
Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEG-KWITDQLRWKIMSCKMRIEQLKQTIC 128
R ++ F + E L R ++ + + + A++ + D LR + + +L++ +
Sbjct: 1307 RGKQAFTQQIEELKRQLEEETKAKSTLAHALQSARHDCDLLREQYEEEQEAKAELQRGMS 1366
Query: 129 KGNEEMEK-----NSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
K N E+ + ++ + +T+E + AQR Q+ +E ++ N K L + K
Sbjct: 1367 KANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTK 1422
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 41.2 bits (95), Expect = 0.002
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 13/178 (7%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEG----KWITDQLRWKIMSCKMRIEQLKQTI 127
R + +K E S L+ + EE + E+ K +E K +Q + +I + ++ ++ +
Sbjct: 655 RSQHNEKVEENSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIRDLQDQLSEMHDEL 714
Query: 128 --CKGNEEMEKNS--EGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDL 183
K +E+ EK + E LL+ K+ Q L + E+++ +++ R+L L ++
Sbjct: 715 DSAKRSEDREKGALIEELLQAKQDLQDLLIAKE---EQEDLLRKRERELTALKGALKEEV 771
Query: 184 RSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVS--SESDSAMTSSTVSKLAE 239
SH + + L+ + EL ++ +EE V A S SE D A T V L E
Sbjct: 772 SSHDQEMDKLKEQYDAELQALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQE 829
Score = 30.8 bits (68), Expect = 2.9
Identities = 29/153 (18%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEK 136
D E+ S+L + E Q+++ ++ + + R ++ + +E+L+ + NE++E+
Sbjct: 611 DLLEQKSKLTIEVAELQRQLQLEVKNQQNIKEERERM---RANLEELRS---QHNEKVEE 664
Query: 137 NSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRS 196
NS + +E +L + + K + ++H ++ DL ++ L ++ L + +RS
Sbjct: 665 NSTLQQRLEESEGELRKNLEELFQVKMEREQHQTEIRDLQDQ----LSEMHDELDSAKRS 720
Query: 197 HILELTSVIFPIEEVKTGVRDPADVSSESDSAM 229
E ++I + + K ++D E + +
Sbjct: 721 EDREKGALIEELLQAKQDLQDLLIAKEEQEDLL 753
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 40.4 bits (93), Expect = 0.004
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 19 PRPLARDLVDSVDDAEGLYVAV-ERCPLCNTTRRRLTCAKCVQSGDFVYFDGRDRERFID 77
PRP+ + ++ +DD +GL + ++ P+ + R T + Q G F Y + R + +D
Sbjct: 442 PRPVIVEPLEQLDDEDGLPEKLAQKNPMYQ--KERETPPRFAQHGTFEY-EYSQRWKSLD 498
Query: 78 KKERLSR--LKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEME 135
+ E+ R ++ ++ + ++ ME + Q R E+L++ N+EM+
Sbjct: 499 EMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQ 558
Query: 136 KNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRK 171
K E L+ +E+ ++ Q + E+ R R+
Sbjct: 559 KRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQRE 594
>gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo
sapiens]
Length = 693
Score = 40.4 bits (93), Expect = 0.004
Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 76 IDKKERLSRLKSKQEEF---QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
++ + LS L +Q++ Q+E+L+ E + + +Q R +C+ NE
Sbjct: 322 VENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQER----------------LCEQNE 365
Query: 133 EMEKNSEGLL----KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVE---KKTIDLRS 185
+ + + L + +++ Q+L + +R ++++E++Q+ ++L D E KK L+
Sbjct: 366 RLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQK 425
Query: 186 HYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM-TSSTVSKLAEARRTT 244
ERLA L ++H L+ +++ D+++E SA+ V +L E
Sbjct: 426 QEERLA-LSQNHKLD--------KQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEE 476
Query: 245 YLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQ 296
+L + +T +S+ ++LP GD + EE+ P++ +
Sbjct: 477 HLEAA-SHQNQQLETQLSL----VALPGEGDGGQHLDSEEEEAPRPTPNIPE 523
Score = 29.6 bits (65), Expect = 6.5
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
RD R + + LS LK++ E A+ + +QL+ + + +E L+ +
Sbjct: 263 RDIHRIQELERSLSELKNQMAEPPSLAPPAVTS--VVEQLQDEAKHLRQEVEGLEGKL-- 318
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
++E N L +KE+ Q+L + + +E++ + R +L + E+ ++ E+
Sbjct: 319 -QSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQ 377
Query: 190 LANLRR 195
LR+
Sbjct: 378 GERLRK 383
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 40.0 bits (92), Expect = 0.005
Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 22/227 (9%)
Query: 26 LVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSGDFVYFDGRDRERFIDKKERLSRL 85
L VDD EG ++ R L AK GD + DK++ +L
Sbjct: 1030 LEQQVDDLEGSLEQEKKL------RMDLERAKRKLEGDLKLAQESTMDMENDKQQLDEKL 1083
Query: 86 KSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTI-------CKGNEEMEKNS 138
+ K+ E + K + + + QL+ KI + RIE+L + I K ++ S
Sbjct: 1084 EKKEFEISNLISKIEDEQAVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLS 1143
Query: 139 EGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRSH- 197
L + E+ ++ E +K + +KL +E+ T+ H +A LR+ H
Sbjct: 1144 RELEEISERLEEAGGATSAQVELNKKREAEFQKLRRDLEEATL---QHEAMVAALRKKHA 1200
Query: 198 --ILELTSVIFPIEEVKTGV-RDPADVSSESDSAMTSSTVSKLAEAR 241
+ EL I ++ VK + ++ +++ E+D SS +++A+
Sbjct: 1201 DSMAELGEQIDNLQRVKQKLEKEKSELKMETDD--LSSNAEAISKAK 1245
Score = 32.0 bits (71), Expect = 1.3
Identities = 34/185 (18%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGN 131
+E F K+ L++ ++K++E +++++ ++ K +++++ ++
Sbjct: 856 KEEFQKTKDELAKSEAKRKELEEKMVTLLKEK----------NDLQLQVQSEADSLADAE 905
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVE--KKTIDLRSHYER 189
E E+ + ++ + K +++ RA+ +E ++ RKL D KK ID
Sbjct: 906 ERCEQLIKNKIQLEAKIKEVTERAEEEEEINAELTAKKRKLEDECSELKKDID------- 958
Query: 190 LANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSKLAEARRTTYLSGR 249
LELT + +E+ K + +E + A T++KL++ ++ + +
Sbjct: 959 --------DLELT--LAKVEKEKHATENKVKNLTE-EMAGLDETIAKLSKEKKALQETHQ 1007
Query: 250 WVCDD 254
DD
Sbjct: 1008 QTLDD 1012
>gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo
sapiens]
Length = 693
Score = 39.7 bits (91), Expect = 0.006
Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 76 IDKKERLSRLKSKQEEF---QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
++ + LS L +Q++ Q+E+L+ E + + +Q R +C+ NE
Sbjct: 322 VENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQER----------------LCEQNE 365
Query: 133 EMEKNSEGLL----KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVE---KKTIDLRS 185
+ + + L + +++ Q+L + +R ++++E++Q+ ++L D E KK L+
Sbjct: 366 RLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQK 425
Query: 186 HYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM-TSSTVSKLAEARRTT 244
ERLA L ++H L+ +++ D+++E SA+ V +L E
Sbjct: 426 QEERLA-LSQNHKLD--------KQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEE 476
Query: 245 YLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQ 296
+L + +T +S+ ++LP GD + EE+ P++ +
Sbjct: 477 HLEAA-SQRNQQLETQLSL----VALPGEGDGGQHLDSEEEEAPRPTPNIPE 523
Score = 29.6 bits (65), Expect = 6.5
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
RD R + + LS LK++ E A+ + +QL+ + + +E L+ +
Sbjct: 263 RDIHRIQELERSLSELKNQMAEPPSLAPPAVTS--VVEQLQDEAKHLRQEVEGLEGKL-- 318
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
++E N L +KE+ Q+L + + +E++ + R +L + E+ ++ E+
Sbjct: 319 -QSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQ 377
Query: 190 LANLRR 195
LR+
Sbjct: 378 GERLRK 383
>gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C
isoform 1 [Homo sapiens]
Length = 693
Score = 39.7 bits (91), Expect = 0.006
Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 76 IDKKERLSRLKSKQEEF---QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
++ + LS L +Q++ Q+E+L+ E + + +Q R +C+ NE
Sbjct: 322 VENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQER----------------LCEQNE 365
Query: 133 EMEKNSEGLL----KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVE---KKTIDLRS 185
+ + + L + +++ Q+L + +R ++++E++Q+ ++L D E KK L+
Sbjct: 366 RLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQK 425
Query: 186 HYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM-TSSTVSKLAEARRTT 244
ERLA L ++H L+ +++ D+++E SA+ V +L E
Sbjct: 426 QEERLA-LSQNHKLD--------KQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEE 476
Query: 245 YLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQ 296
+L + +T +S+ ++LP GD + EE+ P++ +
Sbjct: 477 HLEAA-SQRNQQLETQLSL----VALPGEGDGGQHLDSEEEEAPRPTPNIPE 523
Score = 29.6 bits (65), Expect = 6.5
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 5/126 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
RD R + + LS LK++ E A+ + +QL+ + + +E L+ +
Sbjct: 263 RDIHRIQELERSLSELKNQMAEPPSLAPPAVTS--VVEQLQDEAKHLRQEVEGLEGKL-- 318
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
++E N L +KE+ Q+L + + +E++ + R +L + E+ ++ E+
Sbjct: 319 -QSQVENNQALSLLSKEQKQRLQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQ 377
Query: 190 LANLRR 195
LR+
Sbjct: 378 GERLRK 383
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 39.3 bits (90), Expect = 0.008
Identities = 42/185 (22%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 69 GRDRERFIDKKERLSRLKSK----QEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLK 124
GR RE+ I+KK +L++ + + EE K + + K + + + + K ++ Q K
Sbjct: 1799 GRKREQLIEKKMKLAQKRERWINSMEELTKNKMILYQKKNLAQEKK-NLAQEKEKLAQRK 1857
Query: 125 QTICKGNEEMEKNSEGLLKTKEK----NQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKT 180
+ + E + + + L++ K K N+ L ++ ++KE + + KL + EKK
Sbjct: 1858 ENLLYNKERLTHSKKQLVQVKNKLGMFNKILAQVEEKLTQEKETVIKKKEKLAE-TEKKL 1916
Query: 181 I----DLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSK 236
+ L E+LA + LE V + K +R D++ E + + + +
Sbjct: 1917 VQVEDSLAKKQEKLAQEKMKLALEKAMV-----QGKKRLRGELDIAKEEKA--LNLEMKR 1969
Query: 237 LAEAR 241
LAE +
Sbjct: 1970 LAEEK 1974
Score = 32.7 bits (73), Expect = 0.77
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 13/127 (10%)
Query: 78 KKERLSRLKSKQEEFQKEVLKAMEG-KWITDQLRWKIMSCKM---RIEQLKQTICKGNEE 133
K E L + + + +KE+ + +E +W ++L WK ++ + K+ + + E
Sbjct: 1696 KVEELPQREQNLDWQEKELAQELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEA 1755
Query: 134 M----EKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLG----DLVEKKTIDLRS 185
+ EK SE K ++ + L ++ + KEK+ +LG L+EKK + L
Sbjct: 1756 LAWQREKLSEEETKLAQEEELLIQEKEKLAQHKEKMPEEEERLGRKREQLIEKK-MKLAQ 1814
Query: 186 HYERLAN 192
ER N
Sbjct: 1815 KRERWIN 1821
Score = 32.3 bits (72), Expect = 1.0
Identities = 52/238 (21%), Positives = 94/238 (39%), Gaps = 18/238 (7%)
Query: 26 LVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSGDFVYFDGRDRE---RFIDKKERL 82
L + V EG V +ER P ++ K V + E R + ++E+L
Sbjct: 1437 LEEKVVKQEGKLVMIERTPSWQDWKKAWDEWKQVHGETRKSWKAWKEEWEKRLLQEEEKL 1496
Query: 83 SRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGLL 142
+ K ++ + + + KW WK + M + K+ K EE+ E
Sbjct: 1497 HQAGEKLSPEEEMLQEDKKLKWE----EWKQVWENMLSSKSKEQQYKDEEEVTLEEEVSR 1552
Query: 143 KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTID---LRSHYERLANLRRSHIL 199
+ +EK Q++ + QRH +++ K R +RK +K+ + L E+LA R
Sbjct: 1553 EGEEKEQQV-TEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQ 1611
Query: 200 ELTSVIFPIEEVKTGVRDPAD-----VSSESDSAMTSSTVSKLAE--ARRTTYLSGRW 250
E + ++ R+ A E A +S+ AE A++ L+ +W
Sbjct: 1612 EERKLAQAYVKITQDDREMAQAEGKFAQKEETLAQRGEKLSQEAEKLAQKRKKLAKKW 1669
Score = 32.3 bits (72), Expect = 1.0
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 14/103 (13%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
++ E I +KE+L++ K K E ++ + + E +++ KM++ Q ++
Sbjct: 1772 QEEELLIQEKEKLAQHKEKMPEEEERLGRKRE----------QLIEKKMKLAQKRERWIN 1821
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKL 172
EE+ KN L + K Q+ + AQ +KEK+ + L
Sbjct: 1822 SMEELTKNKMILYQKKNLAQEKKNLAQ----EKEKLAQRKENL 1860
Score = 30.0 bits (66), Expect = 5.0
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 12/117 (10%)
Query: 76 IDKKERLSRLKSKQEE---FQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
I +K + K QEE Q+E A E + + + R K+ ++I Q + + +
Sbjct: 1577 IHRKRARAEKKRAQEERKLAQEEEKLAQEERQLAQEER-KLAQAYVKITQDDREMAQAEG 1635
Query: 133 EMEKNSEGLLKTKEK----NQKLYSRAQRHQEKKEKIQRHNRKL----GDLVEKKTI 181
+ + E L + EK +KL + ++ +K EK+ R KL G L E K I
Sbjct: 1636 KFAQKEETLAQRGEKLSQEAEKLAQKRKKLAKKWEKVAREEEKLAKKGGKLAEVKNI 1692
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 39.3 bits (90), Expect = 0.008
Identities = 33/151 (21%), Positives = 71/151 (47%), Gaps = 17/151 (11%)
Query: 79 KERLSRLKSKQEEFQKEVL----KAMEGKWITDQLRWKIMSCKMRIEQLK---------- 124
+E++SRL+++ +E + V + G+ DQLR ++M + + L+
Sbjct: 968 EEKVSRLETELDEEKNTVELLTDRVNRGRDQVDQLRTELMQERSARQDLECDKISLERQN 1027
Query: 125 ---QTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTI 181
+T +E +K S L + + +NQ L R Q + +K +Q NRKL V++ +I
Sbjct: 1028 KDLKTRLASSEGFQKPSASLSQLESQNQLLQERLQAEEREKTVLQSTNRKLERKVKELSI 1087
Query: 182 DLRSHYERLANLRRSHILELTSVIFPIEEVK 212
+ + + + + L + ++ ++E +
Sbjct: 1088 QIEDERQHVNDQKDQLSLRVKALKRQVDEAE 1118
>gi|62243374 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 39.3 bits (90), Expect = 0.008
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 84 RLKSKQEEFQK--EVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGL 141
RL+ K++ + E + A++G+ +L+W +M +MR+++L+ + E+++ +
Sbjct: 144 RLREKEDSLAQAGETINALKGR--ISELQWSVMDQEMRVKRLESEKQELQEQLDLQHK-- 199
Query: 142 LKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTI---------DLRSHYERLAN 192
K +E NQK+ Q Q +E H +++ DL +K ++ +++S RL
Sbjct: 200 -KCQEANQKI----QELQASQEARADHEQQIKDLEQKLSLQEQDAAIVKNMKSELVRLPR 254
Query: 193 LRR 195
L R
Sbjct: 255 LER 257
>gi|62243369 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 39.3 bits (90), Expect = 0.008
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 84 RLKSKQEEFQK--EVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGL 141
RL+ K++ + E + A++G+ +L+W +M +MR+++L+ + E+++ +
Sbjct: 144 RLREKEDSLAQAGETINALKGR--ISELQWSVMDQEMRVKRLESEKQELQEQLDLQHK-- 199
Query: 142 LKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTI---------DLRSHYERLAN 192
K +E NQK+ Q Q +E H +++ DL +K ++ +++S RL
Sbjct: 200 -KCQEANQKI----QELQASQEARADHEQQIKDLEQKLSLQEQDAAIVKNMKSELVRLPR 254
Query: 193 LRR 195
L R
Sbjct: 255 LER 257
>gi|62243332 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 39.3 bits (90), Expect = 0.008
Identities = 30/123 (24%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 84 RLKSKQEEFQK--EVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGL 141
RL+ K++ + E + A++G+ +L+W +M +MR+++L+ + E+++ +
Sbjct: 144 RLREKEDSLAQAGETINALKGR--ISELQWSVMDQEMRVKRLESEKQELQEQLDLQHK-- 199
Query: 142 LKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTI---------DLRSHYERLAN 192
K +E NQK+ Q Q +E H +++ DL +K ++ +++S RL
Sbjct: 200 -KCQEANQKI----QELQASQEARADHEQQIKDLEQKLSLQEQDAAIVKNMKSELVRLPR 254
Query: 193 LRR 195
L R
Sbjct: 255 LER 257
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 39.3 bits (90), Expect = 0.008
Identities = 54/223 (24%), Positives = 92/223 (41%), Gaps = 21/223 (9%)
Query: 26 LVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSGDFVYFDGRDRERFIDKKERLSRL 85
L VDD EG ++ R L AK GD + DK++ +L
Sbjct: 1031 LEQQVDDLEGSLEQEKKI------RMDLERAKRKLEGDLKLAQESTMDIENDKQQLDEKL 1084
Query: 86 KSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTI-------CKGNEEMEKNS 138
K K+ E K + + + QL+ KI + RIE+L++ I K ++ S
Sbjct: 1085 KKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLS 1144
Query: 139 EGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRSH- 197
L + E+ ++ E +K + +K+ +E+ T+ H A LR+ H
Sbjct: 1145 RELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATL---QHEATAATLRKKHA 1201
Query: 198 --ILELTSVIFPIEEVKTGV-RDPADVSSE-SDSAMTSSTVSK 236
+ EL I ++ VK + ++ +++ E D A TVSK
Sbjct: 1202 DSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMETVSK 1244
Score = 32.3 bits (72), Expect = 1.0
Identities = 38/205 (18%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 24 RDLVDSVDDAEGLYVAVERCPLCNTTRRRLTCAKCVQSG-DFVYFDGRDRERFIDKKERL 82
++L+D+ + + L+ + L NT ++ T +Q + + + R+ E K+ +
Sbjct: 1708 QELLDASERVQLLHT--QNTSLINTKKKLETDISQIQGEMEDIIQEARNAEE--KAKKAI 1763
Query: 83 SRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGLL 142
+ EE +KE + + + L + + R+++ +Q KG ++ + E
Sbjct: 1764 TDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEA-- 1821
Query: 143 KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRSHILELT 202
+ +E ++ S +R+ E + +++H RK+ +L + D R +IL L
Sbjct: 1822 RVRELEGEVESEQKRNVEAVKGLRKHERKVKELTYQTEED------------RKNILRLQ 1869
Query: 203 SVIFPIE-EVKTGVRDPADVSSESD 226
++ ++ +VK+ R + +S+
Sbjct: 1870 DLVDKLQAKVKSYKRQAEEAEEQSN 1894
Score = 29.6 bits (65), Expect = 6.5
Identities = 24/116 (20%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEG-KWITDQLRWKIMSCKMRIEQLKQTIC 128
R ++ F + E L R ++ + + + A++ + D LR + + +L++ +
Sbjct: 1307 RGKQAFTQQIEELKRQLEEEIKAKSALAHALQSSRHDCDLLREQYEEEQEAKAELQRAMS 1366
Query: 129 KGNEEMEK-----NSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
K N E+ + ++ + +T+E + AQR Q+ +E ++ N K L + K
Sbjct: 1367 KANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTK 1422
>gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo
sapiens]
Length = 693
Score = 39.3 bits (90), Expect = 0.008
Identities = 49/232 (21%), Positives = 106/232 (45%), Gaps = 41/232 (17%)
Query: 76 IDKKERLSRLKSKQEEF---QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
++ + LS L +Q++ Q+E+L+ E + + +Q R +C+ NE
Sbjct: 322 VENNQALSLLSKEQKQRLQEQEEMLREQEVQRVREQER----------------LCEQNE 365
Query: 133 EMEKNSEGLL----KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVE---KKTIDLRS 185
+ + + L + +++ Q+L + +R ++++E++Q+ ++L D E KK L+
Sbjct: 366 RLREQQKTLQEQGERLRKQEQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQK 425
Query: 186 HYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM-TSSTVSKLAEARRTT 244
ERLA L ++H L+ +++ D+++E SA+ V +L E
Sbjct: 426 QEERLA-LSQNHKLD--------KQLAEPQCSFEDLNNEKKSALQLEQQVKELQEKLDEE 476
Query: 245 YLSGRWVCDDHNGDTSISITGPWISLPNNGDYSAYYSWVEEKKTTQGPDMEQ 296
+L + +T +S+ ++LP GD + EE+ P++ +
Sbjct: 477 HLEAA-SQQNQQLETQLSL----VALPGEGDGGQHLDSEEEEAPRPTPNIPE 523
>gi|239745153 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 38.9 bits (89), Expect = 0.011
Identities = 26/114 (22%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 71 DRERFIDKKERLSRLKSKQEEF------QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLK 124
+ E+ +++E++ R + K +E Q+++LK E W ++ W+ E+
Sbjct: 460 EEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKM 519
Query: 125 QTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
Q + E+M++ E K +E+ +L+ + ++ QE++ ++Q +LG L +K
Sbjct: 520 Q---EQEEKMQRQEE---KMREQEVRLWQQEEKMQEQEVRLQELEERLGKLGQK 567
Score = 36.2 bits (82), Expect = 0.070
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGN 131
RE+ ++E++ R + K E +++ + E W ++ +I +L
Sbjct: 398 REQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEE----------KIREL-------- 439
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
EEM ++ E K +E +K+ ++ QE++EKIQR K+ + EK
Sbjct: 440 EEMMQDQEE--KLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEK 484
Score = 34.7 bits (78), Expect = 0.20
Identities = 31/165 (18%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
E+ + +E++ + K +E ++++ + E ++ W+ + ++ + ++ I + E
Sbjct: 448 EKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWR----QEKLLKQEEKIWEQEE 503
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEK-----------KEKIQRHNRKLGDLVEKKTI 181
+M + E + + +EK Q+ + QR +EK +EK+Q +L +L E++
Sbjct: 504 KMWRQEEKMWEQEEKMQEQEEKMQRQEEKMREQEVRLWQQEEKMQEQEVRLQEL-EERLG 562
Query: 182 DLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESD 226
L E L R + + PI +V+ ++ + + D
Sbjct: 563 KLGQKAELLGGAGRESGSQRLPTLTPILQVELKSQEAQSLQQQQD 607
Score = 33.9 bits (76), Expect = 0.35
Identities = 22/107 (20%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
E+ ++++++ R + K E ++++ + E W ++ +I + + I + E
Sbjct: 339 EKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEE----------KIREQDEKIQEQEE 388
Query: 133 EMEKNSEGLLKTKEKNQ-KLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
EM + E + + +EK Q K++ + ++ +E+ EKI+ ++ EK
Sbjct: 389 EMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEK 435
Score = 32.3 bits (72), Expect = 1.0
Identities = 22/111 (19%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 72 RERFIDKKERLSRLKSKQEEFQ---KEVLKAME-GKWITDQLRWKIMSCKMRIEQLKQTI 127
+E+ + +E+L ++S++ E Q K++ + +E + + Q + ++ + ++ ++L+
Sbjct: 217 KEKNAELQEKLRLVESEKSEIQLNVKDLKRKLERAQLLLPQQQLQVEADRLG-KELQSVS 275
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
K ++E+N L +++ +K++ + ++ QE++EK+ K+ + EK
Sbjct: 276 AKLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQEEK 326
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/114 (17%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
+ E+ ++E++ + K E + ++ + E W ++ K+ + +I + + + +
Sbjct: 294 QQEEKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEE---KMHEQEEKIREQEDKMWR 350
Query: 130 GNEEMEKNSEGLLKTKEK----NQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
E++ + E + + +EK +K+ + ++ QE++E++ R K+ + EK+
Sbjct: 351 QEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKR 404
Score = 31.6 bits (70), Expect = 1.7
Identities = 22/111 (19%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQ-LRWKIMSCKMRIEQLKQTICKGN 131
E+ +++E++ R + K E +++ + E W ++ +R + + ++ + ++ + + +
Sbjct: 360 EKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQD 419
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEK----KEKIQRHNRKLGDLVEK 178
E++ + E + + +EK ++L Q +EK +EK+Q K+ + EK
Sbjct: 420 EKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEK 470
Score = 29.3 bits (64), Expect = 8.5
Identities = 19/100 (19%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 80 ERLSR-LKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNS 138
+RL + L+S + Q +V + + Q K+ + +I++ ++ +C+ ++ +
Sbjct: 265 DRLGKELQSVSAKLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQE 324
Query: 139 EGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
E + + +E K++ + ++ +E+++K+ R K+ + EK
Sbjct: 325 EKMWRQEE---KMHEQEEKIREQEDKMWRQEEKIREQEEK 361
>gi|239745127 PREDICTED: similar to Putative golgin subfamily A
member 6-like protein 6 [Homo sapiens]
Length = 655
Score = 38.9 bits (89), Expect = 0.011
Identities = 26/114 (22%), Positives = 59/114 (51%), Gaps = 12/114 (10%)
Query: 71 DRERFIDKKERLSRLKSKQEEF------QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLK 124
+ E+ +++E++ R + K +E Q+++LK E W ++ W+ E+
Sbjct: 460 EEEKMQEQEEKIQRQEEKIQEQEEKTWRQEKLLKQEEKIWEQEEKMWRQEEKMWEQEEKM 519
Query: 125 QTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
Q + E+M++ E K +E+ +L+ + ++ QE++ ++Q +LG L +K
Sbjct: 520 Q---EQEEKMQRQEE---KMREQEVRLWQQEEKMQEQEVRLQELEERLGKLGQK 567
Score = 36.2 bits (82), Expect = 0.070
Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 20/107 (18%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGN 131
RE+ ++E++ R + K E +++ + E W ++ +I +L
Sbjct: 398 REQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEE----------KIREL-------- 439
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
EEM ++ E K +E +K+ ++ QE++EKIQR K+ + EK
Sbjct: 440 EEMMQDQEE--KLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEK 484
Score = 34.7 bits (78), Expect = 0.20
Identities = 31/165 (18%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
E+ + +E++ + K +E ++++ + E ++ W+ + ++ + ++ I + E
Sbjct: 448 EKLREVEEKMQEEEEKMQEQEEKIQRQEEKIQEQEEKTWR----QEKLLKQEEKIWEQEE 503
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEK-----------KEKIQRHNRKLGDLVEKKTI 181
+M + E + + +EK Q+ + QR +EK +EK+Q +L +L E++
Sbjct: 504 KMWRQEEKMWEQEEKMQEQEEKMQRQEEKMREQEVRLWQQEEKMQEQEVRLQEL-EERLG 562
Query: 182 DLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESD 226
L E L R + + PI +V+ ++ + + D
Sbjct: 563 KLGQKAELLGGAGRESGSQRLPTLTPILQVELKSQEAQSLQQQQD 607
Score = 33.9 bits (76), Expect = 0.35
Identities = 22/107 (20%), Positives = 55/107 (51%), Gaps = 11/107 (10%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
E+ ++++++ R + K E ++++ + E W ++ +I + + I + E
Sbjct: 339 EKIREQEDKMWRQEEKIREQEEKIREQEEKMWRQEE----------KIREQDEKIQEQEE 388
Query: 133 EMEKNSEGLLKTKEKNQ-KLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
EM + E + + +EK Q K++ + ++ +E+ EKI+ ++ EK
Sbjct: 389 EMWRQEEKIREQEEKRQEKMWRQEKKMREQDEKIREQEEEMWRQEEK 435
Score = 32.3 bits (72), Expect = 1.0
Identities = 22/111 (19%), Positives = 63/111 (56%), Gaps = 5/111 (4%)
Query: 72 RERFIDKKERLSRLKSKQEEFQ---KEVLKAME-GKWITDQLRWKIMSCKMRIEQLKQTI 127
+E+ + +E+L ++S++ E Q K++ + +E + + Q + ++ + ++ ++L+
Sbjct: 217 KEKNAELQEKLRLVESEKSEIQLNVKDLKRKLERAQLLLPQQQLQVEADRLG-KELQSVS 275
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
K ++E+N L +++ +K++ + ++ QE++EK+ K+ + EK
Sbjct: 276 AKLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQEEK 326
Score = 32.0 bits (71), Expect = 1.3
Identities = 20/114 (17%), Positives = 58/114 (50%), Gaps = 7/114 (6%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
+ E+ ++E++ + K E + ++ + E W ++ K+ + +I + + + +
Sbjct: 294 QQEEKMWRQEEKIQEQEEKMCEQELKIREQEEKMWRQEE---KMHEQEEKIREQEDKMWR 350
Query: 130 GNEEMEKNSEGLLKTKEK----NQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
E++ + E + + +EK +K+ + ++ QE++E++ R K+ + EK+
Sbjct: 351 QEEKIREQEEKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKR 404
Score = 31.6 bits (70), Expect = 1.7
Identities = 22/111 (19%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQ-LRWKIMSCKMRIEQLKQTICKGN 131
E+ +++E++ R + K E +++ + E W ++ +R + + ++ + ++ + + +
Sbjct: 360 EKIREQEEKMWRQEEKIREQDEKIQEQEEEMWRQEEKIREQEEKRQEKMWRQEKKMREQD 419
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEK----KEKIQRHNRKLGDLVEK 178
E++ + E + + +EK ++L Q +EK +EK+Q K+ + EK
Sbjct: 420 EKIREQEEEMWRQEEKIRELEEMMQDQEEKLREVEEKMQEEEEKMQEQEEK 470
Score = 29.3 bits (64), Expect = 8.5
Identities = 19/100 (19%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 80 ERLSR-LKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNS 138
+RL + L+S + Q +V + + Q K+ + +I++ ++ +C+ ++ +
Sbjct: 265 DRLGKELQSVSAKLQAQVEENELWNLLNQQQEEKMWRQEEKIQEQEEKMCEQELKIREQE 324
Query: 139 EGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
E + + +E K++ + ++ +E+++K+ R K+ + EK
Sbjct: 325 EKMWRQEE---KMHEQEEKIREQEDKMWRQEEKIREQEEK 361
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 38.9 bits (89), Expect = 0.011
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGN 131
R+ F K+++LS LK Q LK +W W++ + +++ L Q + +
Sbjct: 803 RKAFAKKQQQLSALKVLQRNCAA-YLKLRHWQW------WRVFT---KVKPLLQ-VTRQE 851
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLA 191
EE++ E LLK KEK K+ + + K +++ L + ++ +T +L + E +
Sbjct: 852 EELQAKDEELLKVKEKQTKVEGELEEMERKHQQLLEEKNILAEQLQAET-ELFAEAEEMR 910
Query: 192 NLRRSHILELTSVIFPIE 209
+ EL ++ +E
Sbjct: 911 ARLAAKKQELEEILHDLE 928
Score = 33.1 bits (74), Expect = 0.59
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEME- 135
D +ERL + + ++E +K K ++G+ T L+ +I + +I++LK + K EE++
Sbjct: 1038 DLEERLKKEEKTRQELEKAKRK-LDGE--TTDLQDQIAELQAQIDELKLQLAKKEEELQG 1094
Query: 136 KNSEGLLKTKEKNQ-------------KLYSRAQRHQEKKEKIQRHNRKLGDLVE----- 177
+ G +T KN +L + + + K ++ R L + +E
Sbjct: 1095 ALARGDDETLHKNNALKVVRELQAQIAELQEDFESEKASRNKAEKQKRDLSEELEALKTE 1154
Query: 178 -KKTIDLRSHYERLANLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAMTSSTVSK 236
+ T+D + + L R + EL + EE K D+ +A+ + +
Sbjct: 1155 LEDTLDTTAAQQELRTKREQEVAELKKAL--EEETKNHEAQIQDMRQRHATALEELS-EQ 1211
Query: 237 LAEARR 242
L +A+R
Sbjct: 1212 LEQAKR 1217
Score = 30.8 bits (68), Expect = 2.9
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 5/124 (4%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEV-LKAMEGK--WITDQLRWKIMSCKMRIEQLKQT 126
+D E +D++E +R K + E+ E +K ME + + DQ I K+ +++ +
Sbjct: 953 QDLEEQLDEEEG-ARQKLQLEKVTAEAKIKKMEEEILLLEDQNSKFIKEKKLMEDRIAEC 1011
Query: 127 ICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSH 186
+ EE EK ++ L K + K + + S + +K+EK ++ K ++ +T DL+
Sbjct: 1012 SSQLAEEEEK-AKNLAKIRNKQEVMISDLEERLKKEEKTRQELEKAKRKLDGETTDLQDQ 1070
Query: 187 YERL 190
L
Sbjct: 1071 IAEL 1074
Score = 29.3 bits (64), Expect = 8.5
Identities = 19/93 (20%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 79 KERLSRLKSK----QEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEM 134
K +S L++K +E+ ++E + + + K+ M++E ++ + E+M
Sbjct: 1813 KATISALEAKIGQLEEQLEQEAKERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQM 1872
Query: 135 EKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQR 167
EK + + + K + ++ A R + K+QR
Sbjct: 1873 EKANARMKQLKRQLEEAEEEATRANASRRKLQR 1905
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 38.5 bits (88), Expect = 0.014
Identities = 24/113 (21%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R+RE+ + ++E + R + ++ + Q+E ++ E K + + + KM ++ K +
Sbjct: 563 REREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQE 622
Query: 130 GNEEMEKNSEGLLKTKEKNQ----KLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
++M++ E + + +EK Q K++ + ++ +E++EK++ K+ EK
Sbjct: 623 EEDKMQEQEEMMWEQEEKMQEQEEKMWEQEEKMREQEEKMREQEEKMQGQEEK 675
Score = 37.4 bits (85), Expect = 0.031
Identities = 20/106 (18%), Positives = 59/106 (55%), Gaps = 4/106 (3%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
E+ +++E++ + K E ++++ + E W ++ W+ + ++++ ++ + + E
Sbjct: 581 EKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWE-QEEEDKMQEQEEMMWEQEE 639
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
+M++ E K E+ +K+ + ++ +E++EK+Q K+ + EK
Sbjct: 640 KMQEQEE---KMWEQEEKMREQEEKMREQEEKMQGQEEKMREQEEK 682
Score = 33.5 bits (75), Expect = 0.45
Identities = 26/120 (21%), Positives = 60/120 (50%), Gaps = 9/120 (7%)
Query: 72 RERFIDKKERLSRLKSKQEEFQK-----EVLKAMEGKWITDQLRWKIMSCKMRIEQLKQT 126
++R ++KE+L + QE+ +K E ++ E W ++ W+ + + +Q+ +
Sbjct: 432 QQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQ 491
Query: 127 ICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNR----KLGDLVEKKTID 182
K ++ +K + + E++++L + +R +E+K+ Q+ + K EKKT D
Sbjct: 492 EEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWD 551
Score = 32.7 bits (73), Expect = 0.77
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 79 KERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNS 138
+E + R + + E +K++ K E W ++ R + KMR ++ K + E+ +
Sbjct: 233 QEEMWRQEEELREQEKKIRKQEEKMWRQEE-RLREQEGKMREQEEKM---RRQEKRLREQ 288
Query: 139 EGLLKTKEKN----QKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
E L+ +EK +KL + ++ QE++EK+ K+ + EK
Sbjct: 289 EKELREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEK 332
Score = 32.3 bits (72), Expect = 1.0
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 15/116 (12%)
Query: 70 RDRERFI-DKKERL----SRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLK 124
RD+E+ + D++ER+ RL+ K+E +++ + W ++ K+ K EQ K
Sbjct: 496 RDQEQKMWDQEERMWEQDERLREKEERMREQ-----KKMWQQEE---KMREEKKTQEQEK 547
Query: 125 QTICKGNE--EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
+T + + E E+ E K +E+ + + + ++ QE++EK++ K+ + EK
Sbjct: 548 KTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEKMWEQEEK 603
Score = 31.2 bits (69), Expect = 2.2
Identities = 22/108 (20%), Positives = 58/108 (53%), Gaps = 15/108 (13%)
Query: 72 RERFIDKKERLSRLKSKQEEFQ---KEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTIC 128
+++ + +E+L +S++ E Q KE+ + +E R K + +++ L++ +
Sbjct: 186 KKKNAELQEKLRLAESEKSEIQLNVKELKRKLE--------RAKFLLPQVQTNTLQEEMW 237
Query: 129 KGNEEMEKNSEGLLKTKEK----NQKLYSRAQRHQEKKEKIQRHNRKL 172
+ EE+ + + + K +EK ++L + + +E++EK++R ++L
Sbjct: 238 RQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEKMRRQEKRL 285
Score = 31.2 bits (69), Expect = 2.2
Identities = 23/111 (20%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 68 DGRDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTI 127
+G+ RE+ + + RL+ +++E +++ + E K + +Q EQ++
Sbjct: 268 EGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQ-----------EEQMQ--- 313
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
E+ EK E K +E+ +K++ + +R E++++++ +K+ D E+
Sbjct: 314 ----EQEEKMWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEER 360
Score = 29.3 bits (64), Expect = 8.5
Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
E+ ++ERL + + E ++++ E W D+ R + +MR EQ K
Sbjct: 331 EKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDE-RLREKEERMR-EQEKMW------ 382
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
E E+ + + +E+ +K+ + +E++EK+Q+ + + EK+
Sbjct: 383 EQEEKMQEEERIREREKKMREEEETMREQEEKMQKQEENMWEQEEKE 429
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.5 bits (88), Expect = 0.014
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R+ E+ ++++ R RLK +QEE + ++LK E + Q R K + R+EQ +
Sbjct: 552 REEEKRLEQERREQRLKREQEERRDQLLKREEER---RQQRLK-REQEERLEQRLKREEV 607
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
E E+ E LK +E ++ + + +E++E+ Q+ R+ ++ + ER
Sbjct: 608 ERLEQEERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEER 667
Query: 190 L-ANLRRSH 197
L L+R H
Sbjct: 668 LEQRLKREH 676
Score = 35.8 bits (81), Expect = 0.091
Identities = 25/124 (20%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEK 136
+++ER +L ++EE +++ LK + + + +L+ + + ++ E+ ++ K E E+
Sbjct: 570 EQEERRDQLLKREEERRQQRLKREQEERLEQRLKREEVE-RLEQEERREQRLKREEPEEE 628
Query: 137 NSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLRRS 196
+ LLK++E+ ++ ++ Q ++E+ +R ++L E++ ++ R E R
Sbjct: 629 RRQQLLKSEEQEER-----RQQQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQ 683
Query: 197 HILE 200
+ E
Sbjct: 684 ELAE 687
Score = 35.8 bits (81), Expect = 0.091
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 73 ERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
ER +++ L R K+EE Q+E +QL + + R E+ +Q C+ E
Sbjct: 1067 ERETRRRQELERQYRKEEELQQE----------EEQLLREEPEKRRRQERERQ--CREEE 1114
Query: 133 EMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
E+++ E LL+ + + ++ ++++E++E Q + L + EK+
Sbjct: 1115 ELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKR 1161
Score = 35.4 bits (80), Expect = 0.12
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEK 136
+++ R +LK QEE ++E RW + + R EQ ++ + E E+
Sbjct: 468 EQERRKQQLKRDQEEERRE--------------RWLKLEEEERREQQERREQQLRREQEE 513
Query: 137 NSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERL 190
E LK +E+ ++L R + Q+ + + + +L E+K ++ +RL
Sbjct: 514 RREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRL 567
Score = 35.4 bits (80), Expect = 0.12
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 7/122 (5%)
Query: 70 RDRERFIDKKERL---SRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQT 126
R+ E ++E+L R K +++E +++ + E + +QL + + R E +Q
Sbjct: 1111 REEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQY 1170
Query: 127 ICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSH 186
+ EE+++ E LL+ E+ +K +R ++E++QR RK E + DL+
Sbjct: 1171 --REEEELQQEEEQLLR--EEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQ 1226
Query: 187 YE 188
+E
Sbjct: 1227 WE 1228
Score = 33.9 bits (76), Expect = 0.35
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
+ R+R ++E+L R +Q+E ++ K+ E K + + R + K R ++ + +
Sbjct: 1287 QQRDRHFPEEEQLER--EEQKEAKRRDRKSQEEKQLLREEREE----KRRRQETDRKFRE 1340
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKL 172
+ +++ E L+ +E+++K RHQE+ K ++L
Sbjct: 1341 EEQLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEEQRL 1383
Score = 32.7 bits (73), Expect = 0.77
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 8/106 (7%)
Query: 77 DKKERLSRLKSK---QEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEE 133
++K R L +K QE+ +KE E + ++L+ + + R EQ +Q + E+
Sbjct: 881 ERKRRRHTLYAKPALQEQLRKEQQLLQEEE---EELQREEREKRRRQEQERQY--REEEQ 935
Query: 134 MEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
+++ E LL+ + + ++ R +++++ K+ Q+ + LG+ EK+
Sbjct: 936 LQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKR 981
Score = 31.2 bits (69), Expect = 2.2
Identities = 31/142 (21%), Positives = 60/142 (42%), Gaps = 28/142 (19%)
Query: 77 DKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEK 136
++ E+ RL+ + + + E L +W + R R E+ + CKG+E E
Sbjct: 153 EQSEKQERLEQRDRQRRDEELWRQRQEWQEREER--------RAEEEQLQSCKGHETEEF 204
Query: 137 NSEGLLKTKE--------KNQKLYSRAQRH----QEKKEK--------IQRHNRKLGDLV 176
E L+ +E + +K R +R QE++EK +++ KL +
Sbjct: 205 PDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEE 264
Query: 177 EKKTIDLRSHYERLANLRRSHI 198
++ +L+ E+L L R +
Sbjct: 265 PQRQRELQEEEEQLRKLERQEL 286
>gi|46049114 M-phase phosphoprotein 1 [Homo sapiens]
Length = 1780
Score = 38.5 bits (88), Expect = 0.014
Identities = 41/187 (21%), Positives = 82/187 (43%), Gaps = 11/187 (5%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R + + + L +L + Q+E Q+ E K+ D+ +W + M I Q K+
Sbjct: 1386 RSNKEHENNTDVLGKLTNLQDELQES-----EQKYNADRKKW-LEEKMMLITQAKEAENI 1439
Query: 130 GNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYER 189
N+EM+K +E + ++ ++ + EK +Q+ + LV I L++
Sbjct: 1440 RNKEMKKYAEDRERFFKQQNEMEILTAQLTEKDSDLQKWREERDQLVAALEIQLKALIS- 1498
Query: 190 LANLRRSHILE-LTSVIFPIEEVKTGVRD--PADVSSESDSAMTSSTVSKLAEARRTTYL 246
+N+++ + +E L +I +++T + D P +SS + + +S E R
Sbjct: 1499 -SNVQKDNEIEQLKRIISETSKIETQIMDIKPKRISSADPDKLQTEPLSTSFEISRNKIE 1557
Query: 247 SGRWVCD 253
G V D
Sbjct: 1558 DGSVVLD 1564
Score = 34.3 bits (77), Expect = 0.27
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 14/102 (13%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R E + D KE+L+ K + ++ QKEV + K++ K+ + K+ C
Sbjct: 1240 RKEEDYADLKEKLTDAKKQIKQVQKEVSVMRDED--------KLLRIKINELEKKKNQCS 1291
Query: 130 GNEEMEKNSEGLLKTKEKNQKL------YSRAQRHQEKKEKI 165
+M++ + LK + NQK+ Y RA + KEKI
Sbjct: 1292 QELDMKQRTIQQLKEQLNNQKVEEAIQQYERACKDLNVKEKI 1333
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 38.5 bits (88), Expect = 0.014
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI-----EQLKQT 126
R + +E +R K +QE+ + +LK + Q ++K + EQ++
Sbjct: 255 RNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQAKYKAFVAYQKYGPIIKEQIESK 314
Query: 127 ICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQE--KKEKIQRHNRKLGDLVEKKTI 181
K E EK ++ + + +E+N+K QR +E KK+K + R+ + EKK I
Sbjct: 315 KRKAQEWKEKEAK-IRQKEEENRKRLEEEQRIKEERKKQKEEERKRREKEYEEKKNI 370
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 38.5 bits (88), Expect = 0.014
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI-----EQLKQT 126
R + +E +R K +QE+ + +LK + Q ++K + EQ++
Sbjct: 255 RNLHLQMEEERTRFKDQQEKEKNSLLKQQNNAAVKIQAKYKAFVAYQKYGPIIKEQIESK 314
Query: 127 ICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQE--KKEKIQRHNRKLGDLVEKKTI 181
K E EK ++ + + +E+N+K QR +E KK+K + R+ + EKK I
Sbjct: 315 KRKAQEWKEKEAK-IRQKEEENRKRLEEEQRIKEERKKQKEEERKRREKEYEEKKNI 370
>gi|9257222 forkhead box O1 [Homo sapiens]
Length = 655
Score = 38.1 bits (87), Expect = 0.018
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 430 DLGTDWENLPSPRFCDIPSQSVEVSQSQSTQASPPIASS------SAGGMISSAAASVTS 483
++ D+E LP PR C P E SQS S +SP + S +A G+ S++AA+V++
Sbjct: 9 EIDPDFEPLPRPRSCTWPLPRPEFSQSNSATSSPAPSGSAAANPDAAAGLPSASAAAVSA 68
Query: 484 WF 485
F
Sbjct: 69 DF 70
>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
protein 6 [Homo sapiens]
Length = 724
Score = 38.1 bits (87), Expect = 0.018
Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 5/126 (3%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRI--EQLKQTI 127
R++E I ++E R + + + Q+E + E K + + + KMR E++++
Sbjct: 588 REQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQE 647
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK---KTIDLR 184
K E+ EK E +E+ +K++ + ++ E++EK+Q K+ EK + + LR
Sbjct: 648 KKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKMWEQEVRLR 707
Query: 185 SHYERL 190
E++
Sbjct: 708 QQEEKM 713
Score = 37.7 bits (86), Expect = 0.024
Identities = 31/158 (19%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 72 RERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGN 131
+E I ++E + R K K E ++++ K E W ++ ++ ++ I +
Sbjct: 528 QEEKIREQEEIWRQKEKIHEQEEKIRKQEEKMWRQEE----------KMHDQEEKIREQE 577
Query: 132 EEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLA 191
E++ + E K +E+ +K+ + ++ +E++E Q K+G+ EK E+
Sbjct: 578 EKVWRQEE---KIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEE 634
Query: 192 NLRRSHILELTSVIFPIEEVKTGVRDPADVSSESDSAM 229
+RR ++ I E + +R+ ++ E + M
Sbjct: 635 KMRRQE-EKIREQEKKIREQEEKIREQEEMMQEQEEKM 671
Score = 35.8 bits (81), Expect = 0.091
Identities = 18/108 (16%), Positives = 58/108 (53%), Gaps = 7/108 (6%)
Query: 69 GRDRERFIDKKERLS----RLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLK 124
G E+ +++E++ +++ ++E+ +++ K E + + + + ++ + +
Sbjct: 616 GEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQE 675
Query: 125 QTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKL 172
+ +C+ E+M++ E K + + +K++ + R ++++EK+Q H L
Sbjct: 676 EKMCEQEEKMQEQEE---KMRRQEEKMWEQEVRLRQQEEKMQEHQEHL 720
Score = 33.1 bits (74), Expect = 0.59
Identities = 21/113 (18%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R++E + ++E +++ ++E+ +++ K E + +T + K+ + ++ + ++ + +
Sbjct: 574 REQEEKVWRQEE--KIREQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQE 631
Query: 130 GNEEMEKNSEGLL----KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
E+M + E + K +E+ +K+ + + QE++EK+ K+ + EK
Sbjct: 632 QEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEK 684
Score = 32.7 bits (73), Expect = 0.77
Identities = 25/111 (22%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 72 RERFIDKKERLSRLKSKQEEFQ---KEVLKAME-GKWITDQLRWKIMSCKMRIEQLKQTI 127
+E+ +E+L ++S++ E Q KE+ + +E K + Q + + + + ++L+
Sbjct: 281 KEKNAKLQEKLQLVESEKSEIQLNVKELKRKLERAKLLLPQQQLQAEADHLG-KELQSVS 339
Query: 128 CKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
K ++E+N +++ +K++ + ++ QE +EKIQ K+ + EK
Sbjct: 340 AKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEK 390
Score = 32.3 bits (72), Expect = 1.0
Identities = 23/113 (20%), Positives = 57/113 (50%), Gaps = 10/113 (8%)
Query: 70 RDRERFIDKKERLSRLKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICK 129
R E +K+E++ R + E ++++ + E W ++ KI + ++ + ++
Sbjct: 400 RQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEE---KIRELEEKMHEQEKI--- 453
Query: 130 GNEEMEKNSEGLLKTKEKNQ----KLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
+E ++ E ++ +EK Q K++ + ++ +E++EKI+ K+ EK
Sbjct: 454 REQEEKRQEEEKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEKMWRQEEK 506
Score = 30.8 bits (68), Expect = 2.9
Identities = 25/137 (18%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 70 RDRERFIDKKERLSRLKSKQEEF--QKEVLKAMEGKWITDQLRWK-----IMSCKMRIEQ 122
R E+ D++E++ + ++E+ Q+E ++ E K + + + + ++ +
Sbjct: 561 RQEEKMHDQEEKI---REQEEKVWRQEEKIREQEEKIREQEEKIREQEEMTQEQEEKMGE 617
Query: 123 LKQTICKGNEEMEKNSEGLL----KTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEK 178
++ +C+ E+M++ E + K +E+ +K+ + ++ +E++E +Q K+ + EK
Sbjct: 618 QEEKMCEQEEKMQEQEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMWEQEEK 677
Query: 179 KTIDLRSHYERLANLRR 195
E+ +RR
Sbjct: 678 MCEQEEKMQEQEEKMRR 694
Score = 30.0 bits (66), Expect = 5.0
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 76 IDKKERLSRLKSKQEEF---QKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNE 132
+++ E +RL +QEE Q+E ++ E K + KI + +I + ++ + + E
Sbjct: 346 VEENELWNRLNQQQEEKMWRQEEKIQEWEEK--IQEQEEKIREQEEKIREQEEKMRRQEE 403
Query: 133 EMEKNSEGLLKTKE----KNQKLYSRAQRHQEKKEKIQRHNRKL 172
M + E + + +E K +K+ + + EK+EKI+ K+
Sbjct: 404 MMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKM 447
Score = 29.6 bits (65), Expect = 6.5
Identities = 22/110 (20%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Query: 85 LKSKQEEFQKEVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEMEKNSEGLLKT 144
L+S + Q +V + + Q K+ + +I++ ++ I + E++ + E K
Sbjct: 335 LQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEE---KI 391
Query: 145 KEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKKTIDLRSHYERLANLR 194
+E+ +K+ + + EK+EK++R + + EK +E+ +R
Sbjct: 392 REQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIR 441
>gi|50897852 coiled-coil domain containing 88A isoform 2 [Homo
sapiens]
Length = 1843
Score = 38.1 bits (87), Expect = 0.018
Identities = 18/78 (23%), Positives = 44/78 (56%)
Query: 120 IEQLKQTICKGNEEMEKNSEGLLKTKEKNQKLYSRAQRHQEKKEKIQRHNRKLGDLVEKK 179
+E QT+ K EE++ +S+ L + +++N+ L + ++ K+++++ N++L E K
Sbjct: 789 LEMENQTLQKNLEELKISSKRLEQLEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIK 848
Query: 180 TIDLRSHYERLANLRRSH 197
L + ++ NL + +
Sbjct: 849 DTTLEENNVKIGNLEKEN 866
Score = 30.8 bits (68), Expect = 2.9
Identities = 33/154 (21%), Positives = 70/154 (45%), Gaps = 15/154 (9%)
Query: 80 ERLSRLKSKQEEFQK----EVLKAMEGKWITDQLRWKIMSCKMRIEQLKQTICKGNEEME 135
E++SR E QK EV + + + +L + S +E+L+ T+ + +E
Sbjct: 434 EQISRTSELSEAPQKSLGHEVNELTSSRLL--KLEMENQSLTKTVEELRTTV----DSVE 487
Query: 136 KNSEGLLKTKEKNQKLYSRAQRHQ----EKKEKIQRHNRKLGDLVEKKTIDLRSHYERLA 191
N+ +LK +++NQ+L + + + ++K+ +Q DL+++K L E L
Sbjct: 488 GNASKILKMEKENQRLSKKVEILENEIVQEKQSLQNCQNLSKDLMKEKA-QLEKTIETLR 546
Query: 192 NLRRSHILELTSVIFPIEEVKTGVRDPADVSSES 225
I L + + + +R + +S+E+
Sbjct: 547 ENSERQIKILEQENEHLNQTVSSLRQRSQISAEA 580
Score = 30.4 bits (67), Expect = 3.8
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 71 DRERFIDKKERLSRLKSKQEEFQKEVLKAME-------GKWITDQLRWKIMSCKMRIEQL 123
++ ++IDK L R K K EE + K + G WIT ++R K++ K I +
Sbjct: 1355 EQRQYIDKLNELRRQKEKLEEKIMDQYKFYDPSPPRRRGNWITLKMR-KLIKSKKDINRE 1413
Query: 124 KQTICKGNEEMEKNSEGLLKTKEKNQK 150
+Q +SEG L+ ++ +
Sbjct: 1414 RQKSLTLTPTRSDSSEGFLQLPHQDSQ 1440
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,348,689
Number of Sequences: 37866
Number of extensions: 895490
Number of successful extensions: 4767
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 298
Number of HSP's that attempted gapping in prelim test: 3942
Number of HSP's gapped (non-prelim): 969
length of query: 492
length of database: 18,247,518
effective HSP length: 106
effective length of query: 386
effective length of database: 14,233,722
effective search space: 5494216692
effective search space used: 5494216692
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.