Guide to the Human Genome
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Name: KIAA0831 Sequence: fasta or formatted (492aa) NCBI GI: 50540545
Description:

Barkor

Referenced in:

Additional Membrane Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         31           3
 C cysteine            2.6         13           1
 D aspartate           5.9         29           2
 E glutamate           8.3         41           2
 F phenylalanine       2.4         12           1
 G glycine             5.5         27           2
 H histidine           2.0         10           1
 I isoleucine          4.1         20           1
 K lysine              7.1         35           2
 L leucine             8.9         44           2
 M methionine          2.0         10           1
 N asparagine          3.9         19           2
 P proline             4.3         21           2
 Q glutamine           4.3         21           1
 R arginine            6.7         33           3
 S serine             10.8         53           3
 T threonine           5.3         26           2
 V valine              5.5         27           1
 W tryptophan          1.4          7           1
 Y tyrosine            2.6         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Barkor 
ROCK1                 0.026   Rho-associated, coiled-coil containing protein kinase...
LOC645202             0.018   PREDICTED: hypothetical protein LOC645202 
CLIP1                 0.018   restin isoform b 
CLIP1                 0.018   restin isoform a 
MYH4                  0.018   myosin, heavy polypeptide 4, skeletal muscle 
CGNL1                 0.017   cingulin-like 1 
SFPQ                  0.016   splicing factor proline/glutamine rich (polypyrimidin...
GOLGA6                0.016   golgi autoantigen, golgin subfamily a, 6 
MYH8                  0.016   myosin, heavy chain 8, skeletal muscle, perinatal [...
GOLGA6D               0.016   golgi autoantigen, golgin subfamily a, 6D 
GOLGA6C               0.016   PREDICTED: golgi autoantigen, golgin subfamily a, 6C...
WDR87                 0.014   NYD-SP11 protein 
CGN                   0.014   cingulin 
MAD1L1                0.014   MAD1-like 1 protein 
MAD1L1                0.014   MAD1-like 1 protein 
MAD1L1                0.014   MAD1-like 1 protein 
MYH1                  0.014   myosin, heavy chain 1, skeletal muscle, adult [Homo...
GOLGA6B               0.014   golgi autoantigen, golgin subfamily a, 6B 
LOC400352             0.014   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.014   PREDICTED: similar to Putative golgin subfamily A m...
MYH10                 0.014   myosin, heavy polypeptide 10, non-muscle 
LOC283685             0.014   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.014   trichohyalin 
KIF20B                0.014   M-phase phosphoprotein 1 
LRRIQ1                0.014   leucine-rich repeats and IQ motif containing 1 isof...
LRRIQ1                0.014   leucine-rich repeats and IQ motif containing 1 isof...
FOXO1                 0.013   forkhead box O1 
LOC440243             0.013   PREDICTED: Putative golgin subfamily A member 6-lik...
CCDC88A               0.013   coiled-coil domain containing 88A isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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