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Search of human proteins with 50428940
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50428940 mediator complex subunit 25 [Homo sapiens]
(747 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50428940 mediator complex subunit 25 [Homo sapiens] 1541 0.0
gi|33695090 prostate tumor overexpressed 1 [Homo sapiens] 267 2e-71
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 87 7e-17
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 84 5e-16
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 80 5e-15
gi|7706501 WW domain binding protein 11 [Homo sapiens] 78 3e-14
gi|160707881 formin 2 [Homo sapiens] 77 8e-14
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 74 6e-13
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 73 8e-13
gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3 pre... 73 1e-12
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 71 3e-12
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 71 4e-12
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 70 5e-12
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 70 5e-12
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 70 5e-12
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 70 5e-12
gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2 pre... 70 5e-12
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 70 7e-12
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 69 2e-11
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 68 3e-11
gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens] 68 3e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens] 68 4e-11
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 67 6e-11
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 67 8e-11
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 67 8e-11
gi|54860079 nadrin isoform 1 [Homo sapiens] 66 1e-10
gi|54860105 nadrin isoform 2 [Homo sapiens] 66 1e-10
gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 65 2e-10
gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens] 65 2e-10
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 64 4e-10
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 1541 bits (3990), Expect = 0.0
Identities = 747/747 (100%), Positives = 747/747 (100%)
Query: 1 MVPGSEGPARAGSVVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGD 60
MVPGSEGPARAGSVVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGD
Sbjct: 1 MVPGSEGPARAGSVVADVVFVIEGTANLGPYFEGLRKHYLLPAIEYFNGGPPAETDFGGD 60
Query: 61 YGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLST 120
YGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLST
Sbjct: 61 YGGTQYSLVVFNTVDCAPESYVQCHAPTSSAYEFVTWLDGIKFMGGGGESCSLIAEGLST 120
Query: 121 ALQLFDDFKKMREQIGQTHRVCLLICNSPPYLLPAVESTTYSGCTTENLVQQIGERGIHF 180
ALQLFDDFKKMREQIGQTHRVCLLICNSPPYLLPAVESTTYSGCTTENLVQQIGERGIHF
Sbjct: 121 ALQLFDDFKKMREQIGQTHRVCLLICNSPPYLLPAVESTTYSGCTTENLVQQIGERGIHF 180
Query: 181 SIVSPRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQ 240
SIVSPRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQ
Sbjct: 181 SIVSPRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQ 240
Query: 241 SKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLG 300
SKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLG
Sbjct: 241 SKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLG 300
Query: 301 PRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTA 360
PRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTA
Sbjct: 301 PRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTA 360
Query: 361 QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDAN 420
QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDAN
Sbjct: 361 QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDAN 420
Query: 421 TKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDL 480
TKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDL
Sbjct: 421 TKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDL 480
Query: 481 ESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQV 540
ESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQV
Sbjct: 481 ESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQV 540
Query: 541 ITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASG 600
ITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASG
Sbjct: 541 ITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASG 600
Query: 601 ATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGV 660
ATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGV
Sbjct: 601 ATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGV 660
Query: 661 PPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLL 720
PPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLL
Sbjct: 661 PPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLL 720
Query: 721 SGGPRGPVPQPGLQPSVMEDDILMDLI 747
SGGPRGPVPQPGLQPSVMEDDILMDLI
Sbjct: 721 SGGPRGPVPQPGLQPSVMEDDILMDLI 747
>gi|33695090 prostate tumor overexpressed 1 [Homo sapiens]
Length = 416
Score = 267 bits (683), Expect = 2e-71
Identities = 153/282 (54%), Positives = 181/282 (64%), Gaps = 25/282 (8%)
Query: 322 QAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPG------- 374
+AP GP G PP +P +V V S A P P + AP
Sbjct: 6 RAPYRSGAGGPLGGRGRPP--RPLVVRAVRSRSWPASPRGPQPPRIRARSAPPMEGARVF 63
Query: 375 GVSGPSPAQLGAPALGG----QQSVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSLPCQ 430
G GP LGG + +SNKLLAWSGVLEWQEK +P S D+ KL R+LPCQ
Sbjct: 64 GALGPIGPSSPGLTLGGLAVSEHRLSNKLLAWSGVLEWQEKRRPYS-DSTAKLKRTLPCQ 122
Query: 431 VYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDLESLKGLYRIM 490
YVN GENL+T+QWPQKLIMQLIPQQLLTTLGPLFRNS++ QFHFTN+D +SLKGL RIM
Sbjct: 123 AYVNQGENLETDQWPQKLIMQLIPQQLLTTLGPLFRNSQLAQFHFTNRDCDSLKGLCRIM 182
Query: 491 GNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQVITNHKQVQQQ 550
GNGFAGC+ FPH +PCEVRVLMLLYSSKKKIFMGLIPYDQSGFV+ IRQVIT KQ
Sbjct: 183 GNGFAGCMLFPHISPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVSAIRQVITTRKQAV-- 240
Query: 551 KLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQP 592
G GG + P I+ ++ +++ + P+P+P
Sbjct: 241 -------GPGGVNSGP--VQIVNNKFLAWSGVMEWQEPRPEP 273
Score = 237 bits (605), Expect = 3e-62
Identities = 128/193 (66%), Positives = 147/193 (76%), Gaps = 18/193 (9%)
Query: 371 VAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSLPCQ 430
V PGGV+ G Q V+NK LAWSGV+EWQE P+P + N++ R LP
Sbjct: 240 VGPGGVNS-----------GPVQIVNNKFLAWSGVMEWQE-PRP---EPNSRSKRWLPSH 284
Query: 431 VYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLFRNSRMVQFHFTNKDLESLKGLYRIM 490
VYVN GE L+TEQWP+KL MQLIPQQLLTTL PLFRNSR+VQFHFT KDLE+LK L RIM
Sbjct: 285 VYVNQGEILRTEQWPRKLYMQLIPQQLLTTLVPLFRNSRLVQFHFT-KDLETLKSLCRIM 343
Query: 491 GNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNGIRQVITNHKQVQQQ 550
NGFAGCVHF + A CE+RVLMLLYSS+KKIF+GLIP+DQ FVNGIR+VI N +QV Q+
Sbjct: 344 DNGFAGCVHFSYKASCEIRVLMLLYSSEKKIFIGLIPHDQGNFVNGIRRVIANQQQVLQR 403
Query: 551 KL--EQQQRGMGG 561
L EQQQRGMGG
Sbjct: 404 NLEQEQQQRGMGG 416
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 86.7 bits (213), Expect = 7e-17
Identities = 71/193 (36%), Positives = 82/193 (42%), Gaps = 27/193 (13%)
Query: 561 GQQAPPGL--GPILEDQARPSQNLLQLRPPQPQPQGTVGASGAT--GQPQ---PQGTAQP 613
G PPG GP + +P +P P PQG S + G+PQ PQG QP
Sbjct: 70 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 129
Query: 614 -----PPGAPQGPP----GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQ 664
PPG PQGPP GPPPPG +PQ P +S PP + PPPQ
Sbjct: 130 QGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGDNKSRSSRSPPGKPQGPPPQ 186
Query: 665 ASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLS--G 722
QP G P PPP + G P G PP P PP+ Q S G
Sbjct: 187 GG---NQPQGPP---PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPG 240
Query: 723 GPRGPVPQPGLQP 735
P+GP PQ G QP
Sbjct: 241 KPQGPPPQGGNQP 253
Score = 84.7 bits (208), Expect = 3e-16
Identities = 70/195 (35%), Positives = 82/195 (42%), Gaps = 30/195 (15%)
Query: 561 GQQAPPGL--GPILEDQARPSQNLLQLRPPQPQPQG---TVGASGATGQPQ---PQGTAQ 612
G PPG GP + +P +P P PQG + + G+PQ PQG Q
Sbjct: 131 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQ 190
Query: 613 P-----PPGAPQGPP----GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP 663
P PPG PQGPP GPPPPG +PQ P +S PP + PPP
Sbjct: 191 PQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGDNKSQSARSPPGKPQGPPP 247
Query: 664 QASLHHLQPPGAPAL-LPPPHQGLGQPQLGPPLLHP--PPAQSWPAQLPPRAPLPGQMLL 720
Q PP P PP QG +PQ PP P PP Q R+P
Sbjct: 248 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSP------- 300
Query: 721 SGGPRGPVPQPGLQP 735
G P+GP PQ G QP
Sbjct: 301 PGKPQGPPPQGGNQP 315
Score = 82.8 bits (203), Expect = 1e-15
Identities = 71/199 (35%), Positives = 82/199 (41%), Gaps = 27/199 (13%)
Query: 561 GQQAPPGL--GPILEDQARPSQNLLQLRPPQPQPQG---TVGASGATGQPQ---PQGTAQ 612
G PPG GP + +P +P P PQG + A G+PQ PQG Q
Sbjct: 193 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQ 252
Query: 613 P-----PPGAPQGPP----GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP 663
P PPG PQGPP GPPPPG +PQ P +S PP + PPP
Sbjct: 253 PQGPPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGGSKSRSSRSPPGKPQGPPP 309
Query: 664 QASLHHLQPPGAPAL-LPPPHQGLGQPQLGPPLLHP--PPAQ----SWPAQLPPRAPLPG 716
Q PP P PP QG +PQ PP P PP Q S A+ PP P
Sbjct: 310 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGP 369
Query: 717 QMLLSGGPRGPVPQPGLQP 735
P+GP P G P
Sbjct: 370 PQQEGNNPQGPPPPAGGNP 388
Score = 77.4 bits (189), Expect = 4e-14
Identities = 58/152 (38%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 590 PQPQGTVGASGATGQPQPQGTAQPPPGAPQGPP----GAASGPPPPGPILRPQNPGANPQ 645
P P G G QPQG PPPG PQGPP GPPPPG +PQ P
Sbjct: 51 PSPPGKPQGPPPQGGNQPQG-PPPPPGKPQGPPPQGGNKPQGPPPPG---KPQGPPPQGD 106
Query: 646 LRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWP 705
+S PP + PPPQ QP G P PPP + G P G PP P
Sbjct: 107 -KSRSPRSPPGKPQGPPPQGG---NQPQGPP---PPPGKPQGPPPQGGNKPQGPPPPGKP 159
Query: 706 AQLPPRAPLPGQMLLS--GGPRGPVPQPGLQP 735
PP+ + S G P+GP PQ G QP
Sbjct: 160 QGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQP 191
Score = 73.2 bits (178), Expect = 8e-13
Identities = 78/213 (36%), Positives = 82/213 (38%), Gaps = 55/213 (25%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQP--QPQGTVGASGATGQPQPQG----TAQP 613
G Q PP G AR Q PPQ QPQG G P PQG P
Sbjct: 219 GKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 278
Query: 614 PPGAPQGPP--------------GAASGPPPPG---------PILRPQNP----GANPQL 646
PPG PQGPP G GPPP G P +PQ P G PQ
Sbjct: 279 PPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 338
Query: 647 RSLLLNP--PPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSW 704
P PPPQ G A PPG P PP Q PQ GP PPPA
Sbjct: 339 PPPPGKPQGPPPQGGSKSRSAR----SPPGKPQ--GPPQQEGNNPQ-GP----PPPAGGN 387
Query: 705 PAQLPPRAPLPGQMLLSGGPRGPV-PQPGLQPS 736
P Q P+AP GQ P+GP P G +PS
Sbjct: 388 PQQ--PQAPPAGQ------PQGPPRPPQGGRPS 412
Score = 70.1 bits (170), Expect = 7e-12
Identities = 62/145 (42%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 603 GQPQ---PQGTAQP-----PPGAPQGPPGAASGPP--PPGPILRPQNPGANPQLRSLLLN 652
G PQ PQG +P PPG PQGPP P PP P +PQ P PQ +
Sbjct: 34 GNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP--PPQGGNKPQG 91
Query: 653 PPPP-QTGVPPPQA--SLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPA--QSWPAQ 707
PPPP + PPPQ S PPG P PP QG QPQ GPP PPP Q P Q
Sbjct: 92 PPPPGKPQGPPPQGDKSRSPRSPPGKPQ--GPPPQGGNQPQ-GPP---PPPGKPQGPPPQ 145
Query: 708 --LPPRAPLPGQMLLSGGPRGPVPQ 730
P+ P P G P+GP PQ
Sbjct: 146 GGNKPQGPPP-----PGKPQGPPPQ 165
Score = 63.2 bits (152), Expect = 9e-10
Identities = 56/149 (37%), Positives = 59/149 (39%), Gaps = 29/149 (19%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQP--QPQGTVGASGATGQPQPQG----TAQP 613
G Q PP G +R Q PPQ QPQG G P PQG P
Sbjct: 281 GKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPP 340
Query: 614 PPGAPQGPPG-------AASGPP--PPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQ 664
PPG PQGPP +A PP P GP PQ G NPQ PPP G P Q
Sbjct: 341 PPGKPQGPPPQGGSKSRSARSPPGKPQGP---PQQEGNNPQ-------GPPPPAGGNPQQ 390
Query: 665 ASLHHLQPPGAPALLPPPHQGLGQPQLGP 693
P G P P P QG G+P P
Sbjct: 391 P---QAPPAGQPQGPPRPPQG-GRPSRPP 415
Score = 51.2 bits (121), Expect = 3e-06
Identities = 48/164 (29%), Positives = 52/164 (31%), Gaps = 30/164 (18%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNA 288
P GG GP P PP P G Q PP PP Q
Sbjct: 41 PQGGNKPQGP-------PSPPGKPQGPPPQGGNQPQGPPPPPG------------KPQGP 81
Query: 289 VEAAKNQKAGLGPRFSPITPLQQ--------AAPG--VGPPFSQAPAPQLPPGPPGAPK- 337
N+ G P P P Q + PG GPP PQ PP PPG P+
Sbjct: 82 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 141
Query: 338 PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
PPP PG P Q S + PG GP P
Sbjct: 142 PPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPP 185
Score = 50.8 bits (120), Expect = 4e-06
Identities = 63/226 (27%), Positives = 75/226 (33%), Gaps = 46/226 (20%)
Query: 200 PPALLEPLQPPT--DVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPV--PLPPAAPSGA 255
PP +P PP D S+ PR P G P P QP P PP P G
Sbjct: 92 PPPPGKPQGPPPQGDKSRSPRS---------PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 142
Query: 256 TLSAA--PQQPLPPVPPQYQVP-GNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQA 312
PQ P PP PQ P G+ + + + G P+ P P
Sbjct: 143 PPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP---- 198
Query: 313 APGVGPPFSQAPAPQ-----LPPGPPGAPK--PPPASQPSLVSTVAPGSGLAPTAQPGAP 365
G P Q P PQ P PPG P+ PP S + PG P Q G
Sbjct: 199 ----GKP--QGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQ 252
Query: 366 SMAGTVAPGGVSGPSP-------------AQLGAPALGGQQSVSNK 398
PG GP P G P GG +S S++
Sbjct: 253 PQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSR 298
Score = 49.3 bits (116), Expect = 1e-05
Identities = 59/193 (30%), Positives = 64/193 (33%), Gaps = 26/193 (13%)
Query: 200 PPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPV--PLPPAAPSGATL 257
PP +P PP P+ R P G P P QP P PP P G
Sbjct: 153 PPPPGKPQGPP------PQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206
Query: 258 SAA--PQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPG 315
PQ P PP PQ P + +Q A K Q GP P Q P
Sbjct: 207 QGGNKPQGPPPPGKPQGPPPQGDNKSQSARS---PPGKPQ----GP--PPQGGNQPQGPP 257
Query: 316 VGPPFSQAPAPQ-----LPPGPPGAPK--PPPASQPSLVSTVAPGSGLAPTAQPGAPSMA 368
P Q P PQ P PPG P+ PP S S PG P Q G
Sbjct: 258 PPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQG 317
Query: 369 GTVAPGGVSGPSP 381
PG GP P
Sbjct: 318 PPPPPGKPQGPPP 330
Score = 48.9 bits (115), Expect = 2e-05
Identities = 51/172 (29%), Positives = 60/172 (34%), Gaps = 18/172 (10%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPA---------APSGATLSAAPQ---QPLPPVPPQYQVPG 276
P GG GP +P PP +P G PQ QP P PP + G
Sbjct: 206 PQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 265
Query: 277 NLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGV--GPPFSQAPAPQLPPGPPG 334
Q K Q G P+ + ++ PG GPP PQ PP PPG
Sbjct: 266 PPPQGGNKPQGPPPPGKPQ--GPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPG 323
Query: 335 -APKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLG 385
PPP PG P Q G+ S + PG GP P Q G
Sbjct: 324 KPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGP-PQQEG 374
Score = 48.1 bits (113), Expect = 3e-05
Identities = 48/164 (29%), Positives = 53/164 (32%), Gaps = 21/164 (12%)
Query: 229 PVGGGSAPGPLQSKQPV--PLPPAAPSGATLSAA--PQQPLPPVPPQYQVPGNLSAAQVA 284
P G P P QP P PP P G PQ P PP PQ P +
Sbjct: 53 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPR 112
Query: 285 AQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQ-----LPPGPPGAPK-- 337
+ + G P+ P P G P Q P PQ P PPG P+
Sbjct: 113 SPPGKPQGPPPQGGNQPQGPPPPP--------GKP--QGPPPQGGNKPQGPPPPGKPQGP 162
Query: 338 PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
PP S S PG P Q G PG GP P
Sbjct: 163 PPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 206
Score = 43.9 bits (102), Expect = 5e-04
Identities = 50/181 (27%), Positives = 57/181 (31%), Gaps = 34/181 (18%)
Query: 229 PVGGGSAPGPLQSKQPV--PLPPAAPSGATLSAA--PQQPLPPVPPQYQVPGNLSAAQVA 284
P G P P QP P PP P G PQ P PP PQ P
Sbjct: 238 PPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP--------- 288
Query: 285 AQNAVEAAKNQKAGLGPRFSPITPLQQAA-----PGVGPPFSQAPAPQ-----LPPGPPG 334
+ ++ P P P Q P P Q P PQ P PPG
Sbjct: 289 -----QGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 343
Query: 335 APK--PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQ 392
P+ PP S + PG P Q G P +G +P Q AP G
Sbjct: 344 KPQGPPPQGGSKSRSARSPPGKPQGPPQQEG----NNPQGPPPPAGGNPQQPQAPPAGQP 399
Query: 393 Q 393
Q
Sbjct: 400 Q 400
Score = 42.4 bits (98), Expect = 0.002
Identities = 50/171 (29%), Positives = 57/171 (33%), Gaps = 40/171 (23%)
Query: 200 PPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPV--PLPPAAPSGATL 257
PP +P PP P+ R P G P P QP P PP P G
Sbjct: 277 PPPPGKPQGPP------PQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 330
Query: 258 SAA--PQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPG 315
PQ P PP PQ P S ++ A R P P
Sbjct: 331 QGGNKPQGPPPPGKPQGPPPQGGSKSRSA-----------------RSPPGKPQ------ 367
Query: 316 VGPPFSQAPAPQLPPGPPGA----PKPPPASQPSLVSTVAPGSGLAPTAQP 362
GPP + PQ PP P G P+ PPA QP P G P+ P
Sbjct: 368 -GPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQ--GPPRPPQGGRPSRPP 415
Score = 36.6 bits (83), Expect = 0.087
Identities = 33/99 (33%), Positives = 39/99 (39%), Gaps = 12/99 (12%)
Query: 288 AVEAAKNQKAGLGPRFSP--ITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP---AS 342
A+ +A+N + SP I Q AP G PQ PP PPG P+ PP +
Sbjct: 12 ALSSAQNLNEDVSQEESPSLIAGNPQGAPPQG-----GNKPQGPPSPPGKPQGPPPQGGN 66
Query: 343 QPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
QP PG P Q G G PG GP P
Sbjct: 67 QPQ-GPPPPPGKPQGPPPQ-GGNKPQGPPPPGKPQGPPP 103
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 84.0 bits (206), Expect = 5e-16
Identities = 82/234 (35%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 516 SSKKKIFMGLIP----YDQSGFVNGIRQVITNHKQVQQQKLEQQQRGMG-GQQAPPGLGP 570
SSKK M L+P + Q+ V + + ++Q +K Q + G G+ PPG
Sbjct: 136 SSKK--LMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGS- 192
Query: 571 ILEDQARPSQNLLQLRPPQPQPQGT--VGASGATGQPQPQGTAQPPPGAPQGPPG--AAS 626
A P + R P P G G +G G P P Q PP P GPPG
Sbjct: 193 --SRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPP 250
Query: 627 GPPPPGPILRPQNPGANPQLRSLLLNPPPP-----QTGVPPPQASLHHLQPPGAPALLPP 681
GPPPPG +L P P A P R PPPP Q PP L PP P PP
Sbjct: 251 GPPPPGQVLPP--PLAGPPNRG--DRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPP 306
Query: 682 PHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
P G PQ GPP PPP P P PL + L+ P P P PG P
Sbjct: 307 P--GPPPPQQGPP---PPPG---PFPPRPPGPLGPPLTLAPPPHLPGPPPGAPP 352
Score = 62.4 bits (150), Expect = 1e-09
Identities = 55/163 (33%), Positives = 61/163 (37%), Gaps = 15/163 (9%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNA 288
P G G P P + Q P PP P G P P P PP +P L+
Sbjct: 220 PAGPGGPPPPFPAGQTPPRPPLGPPG------PPGPPGPPPPGQVLPPPLAGPPNRGDRP 273
Query: 289 VEAAKNQKAGLG-PRFSPITP-LQQAAPGVGPPFSQAPAPQLPPGPPG--APKPPPASQP 344
G P P+ P PG GPP P Q PP PPG P+PP P
Sbjct: 274 PPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGP 333
Query: 345 SLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAP 387
L T+AP L P PGAP A V P P P G P
Sbjct: 334 PL--TLAPPPHL-PGPPPGAPPPAPHVNPAFF--PPPTNSGMP 371
Score = 50.8 bits (120), Expect = 4e-06
Identities = 51/152 (33%), Positives = 54/152 (35%), Gaps = 38/152 (25%)
Query: 561 GQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPG--AP 618
GQ PP L RP +L P QP Q +G P P G P PG P
Sbjct: 256 GQVLPPPLAGPPNRGDRPPPPVLF--PGQPFGQPPLG-------PLPPGPPPPVPGYGPP 306
Query: 619 QGPPGAASGPPPP---------GPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHH 669
GPP GPPPP GP+ P P L P P G PPP
Sbjct: 307 PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHL-------PGPPPGAPPP------ 353
Query: 670 LQPPGAPALLPPPHQGLGQP---QLGPPLLHP 698
P PA PPP G P GPP P
Sbjct: 354 -APHVNPAFFPPPTNS-GMPTSDSRGPPPTDP 383
Score = 32.3 bits (72), Expect = 1.6
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 2/76 (2%)
Query: 562 QQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGP 621
Q PP GP P L L PP P GA P PPP P
Sbjct: 314 QGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNP--AFFPPPTNSGMP 371
Query: 622 PGAASGPPPPGPILRP 637
+ GPPP P RP
Sbjct: 372 TSDSRGPPPTDPYGRP 387
Score = 31.6 bits (70), Expect = 2.8
Identities = 30/105 (28%), Positives = 35/105 (33%), Gaps = 9/105 (8%)
Query: 281 AQVAAQNAVEAAKNQKAGLG----PRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAP 336
+Q Q+ Q +G G P S Q G G P PGP G
Sbjct: 165 SQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPG 224
Query: 337 KPPPASQPSLVSTVAPGSGLAPTAQPG--APSMAGTVAPGGVSGP 379
PPP P P L P PG P G V P ++GP
Sbjct: 225 GPPP---PFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGP 266
Score = 31.2 bits (69), Expect = 3.7
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 20/78 (25%)
Query: 314 PGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAP 373
PG P + P P GP G P P PA Q P L P PG P
Sbjct: 208 PGAVPGGDRFPGPA---GPGGPPPPFPAGQ------TPPRPPLGPPGPPGPPGP------ 252
Query: 374 GGVSGPSPAQLGAPALGG 391
P P Q+ P L G
Sbjct: 253 -----PPPGQVLPPPLAG 265
Score = 31.2 bits (69), Expect = 3.7
Identities = 29/103 (28%), Positives = 34/103 (33%), Gaps = 15/103 (14%)
Query: 561 GQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQG 620
G PPG P + P P P+P G +G T P P PP P
Sbjct: 302 GYGPPPGPPPPQQGPPPPPG------PFPPRPPGPLGPP-LTLAPPPHLPGPPPGAPPPA 354
Query: 621 PPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP 663
P + PPP P + P PP G PPP
Sbjct: 355 PHVNPAFFPPPTNSGMPTSDSRGP--------PPTDPYGRPPP 389
Score = 30.4 bits (67), Expect = 6.3
Identities = 17/49 (34%), Positives = 18/49 (36%)
Query: 334 GAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPA 382
G PP S + G G P A PG G PGG P PA
Sbjct: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPA 232
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 80.5 bits (197), Expect = 5e-15
Identities = 72/199 (36%), Positives = 82/199 (41%), Gaps = 29/199 (14%)
Query: 561 GQQAPPGL--GPILEDQARPSQNLLQLRPPQPQPQGTVGASGAT--GQPQ---------P 607
G PPG GP + RP +P P PQG S + G+PQ P
Sbjct: 110 GPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 169
Query: 608 QGTAQPPPGAPQGPPGAA----SGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP 663
QG PPPG PQGPP GPPPPG +PQ P +S PP + PPP
Sbjct: 170 QG-PPPPPGKPQGPPPQGGKKPQGPPPPG---KPQGPPPQGD-KSRSSQSPPGKPQGPPP 224
Query: 664 QASLHHLQPPGAPAL-LPPPHQGLGQPQLGPPLLHP--PPAQ----SWPAQLPPRAPLPG 716
Q PP P PP QG +PQ PP P PPAQ S A+ PP P
Sbjct: 225 QGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGP 284
Query: 717 QMLLSGGPRGPVPQPGLQP 735
P+GP P G P
Sbjct: 285 PQQEGNNPQGPPPPAGGNP 303
Score = 77.0 bits (188), Expect = 6e-14
Identities = 75/205 (36%), Positives = 84/205 (40%), Gaps = 53/205 (25%)
Query: 561 GQQAPPGLGPILEDQARPSQ--NLLQLRPPQPQPQGTVGASGATGQPQPQG----TAQPP 614
G PPG + Q P Q N Q PP +PQG P PQG + + P
Sbjct: 49 GPPPPPG-----KPQGPPPQGGNKPQGPPPPGKPQG----------PPPQGDKSRSPRSP 93
Query: 615 PGAPQGPPGAASGPP--PPGPILRPQNPGANPQLRSLLLNPPPP-QTGVPPPQA--SLHH 669
PG PQGPP P PP P +PQ P PQ + PPPP + PPPQ S
Sbjct: 94 PGKPQGPPPQGGNQPQGPPPPPGKPQGP--PPQGGNRPQGPPPPGKPQGPPPQGDKSRSP 151
Query: 670 LQPPGAPALLPPPHQGLGQPQLGPPLLHPPPA-------------QSWPAQLPPRAPLP- 715
PPG P PP QG QPQ GPP PPP Q P P+ P P
Sbjct: 152 RSPPGKPQ--GPPPQGGNQPQ-GPP---PPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQ 205
Query: 716 -----GQMLLSGGPRGPVPQPGLQP 735
G P+GP PQ G QP
Sbjct: 206 GDKSRSSQSPPGKPQGPPPQGGNQP 230
Score = 73.9 bits (180), Expect = 5e-13
Identities = 74/202 (36%), Positives = 83/202 (41%), Gaps = 31/202 (15%)
Query: 548 QQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQ--PQPQGTVGASGATGQP 605
Q K + G Q PP G P Q PPQ +PQG G P
Sbjct: 144 QGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPP 203
Query: 606 QPQG----TAQPPPGAPQGPPGAASGPP--PPGPILRPQNPGANPQLRSLLLNPPPPQTG 659
PQG ++Q PPG PQGPP P PP P +PQ P PQ + PPPP
Sbjct: 204 -PQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP--PQGGNKPQGPPPPGKP 260
Query: 660 VPPP----QASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLP 715
PP S PPG P PP Q PQ GP PPPA P Q P+AP
Sbjct: 261 QGPPAQGGSKSQSARSPPGKPQ--GPPQQEGNNPQ-GP----PPPAGGNPQQ--PQAPPA 311
Query: 716 GQMLLSGGPRGPV-PQPGLQPS 736
GQ P+GP P G +PS
Sbjct: 312 GQ------PQGPPRPPQGGRPS 327
Score = 63.2 bits (152), Expect = 9e-10
Identities = 59/152 (38%), Positives = 64/152 (42%), Gaps = 36/152 (23%)
Query: 560 GGQQAPPGLGPILEDQARPSQN---LLQLRPPQP--QPQGTVGASGATGQPQPQG----T 610
G Q PP G D++R SQ+ Q PPQ QPQG G P PQG
Sbjct: 197 GKPQGPPPQG----DKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ 252
Query: 611 AQPPPGAPQGPPG-------AASGPP--PPGPILRPQNPGANPQLRSLLLNPPPPQTGVP 661
PPPG PQGPP +A PP P GP PQ G NPQ PPP G
Sbjct: 253 GPPPPGKPQGPPAQGGSKSQSARSPPGKPQGP---PQQEGNNPQ-------GPPPPAGGN 302
Query: 662 PPQASLHHLQPPGAPALLPPPHQGLGQPQLGP 693
P Q P G P P P QG G+P P
Sbjct: 303 PQQP---QAPPAGQPQGPPRPPQG-GRPSRPP 330
Score = 62.8 bits (151), Expect = 1e-09
Identities = 66/179 (36%), Positives = 71/179 (39%), Gaps = 59/179 (32%)
Query: 579 SQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQ 638
S +L+ P P PQG +PQG PPP PPG GPPP G
Sbjct: 28 SPSLIAGNPQGPSPQGG---------NKPQG---PPP-----PPGKPQGPPPQG------ 64
Query: 639 NPGANPQLRSLLLNPPPPQTGV-PPPQA--SLHHLQPPGAPALLPPPHQGLGQPQLGPPL 695
G PQ PPPP PPPQ S PPG P PP QG QPQ GPP
Sbjct: 65 --GNKPQ------GPPPPGKPQGPPPQGDKSRSPRSPPGKPQ--GPPPQGGNQPQ-GPP- 112
Query: 696 LHPPPA-------------QSWPAQLPPRAPLP-GQMLLS-----GGPRGPVPQPGLQP 735
PPP Q P P+ P P G S G P+GP PQ G QP
Sbjct: 113 --PPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 169
Score = 60.1 bits (144), Expect = 7e-09
Identities = 62/216 (28%), Positives = 70/216 (32%), Gaps = 32/216 (14%)
Query: 200 PPALLEPLQPPT--DVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPV--PLPPAAPSGA 255
PP +P PP D S+ PR P G P P QP P PP P G
Sbjct: 71 PPPPGKPQGPPPQGDKSRSPRS---------PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 121
Query: 256 TLSAA--PQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAA 313
PQ P PP PQ P + + + G P+ P P +
Sbjct: 122 PPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQ- 180
Query: 314 PGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAP 373
GPP PQ PP P PPP S S PG P Q G P
Sbjct: 181 ---GPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPP 237
Query: 374 GGVSGPSP-------------AQLGAPALGGQQSVS 396
G GP P G PA GG +S S
Sbjct: 238 GKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQS 273
Score = 53.9 bits (128), Expect = 5e-07
Identities = 59/195 (30%), Positives = 68/195 (34%), Gaps = 46/195 (23%)
Query: 200 PPALLEPLQPPT--DVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPV--PLPPAAPSGA 255
PP +P PP D S+ PR P G P P QP P PP P G
Sbjct: 132 PPPPGKPQGPPPQGDKSRSPRS---------PPGKPQGPPPQGGNQPQGPPPPPGKPQGP 182
Query: 256 TLSAA--PQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAA 313
PQ P PP PQ P + K++ + Q+
Sbjct: 183 PPQGGKKPQGPPPPGKPQGPPP--------------QGDKSRSS-------------QSP 215
Query: 314 PGV--GPPFSQAPAPQLPPGPPG-APKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGT 370
PG GPP PQ PP PPG PPP PG P AQ G+ S +
Sbjct: 216 PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSAR 275
Query: 371 VAPGGVSGPSPAQLG 385
PG GP P Q G
Sbjct: 276 SPPGKPQGP-PQQEG 289
Score = 53.5 bits (127), Expect = 7e-07
Identities = 47/156 (30%), Positives = 52/156 (33%), Gaps = 15/156 (9%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAA--PQQPLPPVPPQYQVPGNLSAAQVAAQ 286
P GG GP P PP P G PQ P PP PQ P + +
Sbjct: 41 PQGGNKPQGP-------PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSP 93
Query: 287 NAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPK-PPPASQPS 345
+ G P+ P P GPP PQ PP PPG P+ PPP S
Sbjct: 94 PGKPQGPPPQGGNQPQGPPPPP----GKPQGPPPQGGNRPQGPP-PPGKPQGPPPQGDKS 148
Query: 346 LVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
PG P Q G PG GP P
Sbjct: 149 RSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP 184
Score = 52.0 bits (123), Expect = 2e-06
Identities = 47/164 (28%), Positives = 55/164 (33%), Gaps = 12/164 (7%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNA 288
P GG GP +P PP + + P +P P P P Q
Sbjct: 62 PQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGP 121
Query: 289 VEAAKNQKAGLGPRFSPITPLQQ--------AAPG--VGPPFSQAPAPQLPPGPPGAPK- 337
N+ G P P P Q + PG GPP PQ PP PPG P+
Sbjct: 122 PPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 181
Query: 338 PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
PPP PG P Q G S + PG GP P
Sbjct: 182 PPPQGGKKPQGPPPPGKPQGPPPQ-GDKSRSSQSPPGKPQGPPP 224
Score = 39.3 bits (90), Expect = 0.013
Identities = 41/125 (32%), Positives = 45/125 (36%), Gaps = 32/125 (25%)
Query: 548 QQQKLEQQQRGMGGQQAPPGLG---------PILEDQARPSQ--NLLQLRPPQPQPQGTV 596
Q K Q G Q PP G P + Q P Q N Q PP +PQG
Sbjct: 205 QGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP 264
Query: 597 GASGATGQP------QPQGTAQ--------PPPGA------PQGPP-GAASGPPPPGPIL 635
G+ Q +PQG Q PPP A PQ PP G GPP P
Sbjct: 265 AQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGG 324
Query: 636 RPQNP 640
RP P
Sbjct: 325 RPSRP 329
Score = 35.8 bits (81), Expect = 0.15
Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Query: 317 GPPFSQAPAPQLPPGPPGAPK-PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGG 375
GP PQ PP PPG P+ PPP PG P Q G S + PG
Sbjct: 38 GPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ-GDKSRSPRSPPGK 96
Query: 376 VSGPSP 381
GP P
Sbjct: 97 PQGPPP 102
Score = 32.7 bits (73), Expect = 1.3
Identities = 25/84 (29%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAG 369
Q+ +P + Q P+PQ P G P PP Q G P +P P G
Sbjct: 25 QEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 84
Query: 370 TVAPGGVSGPSPAQLGAPALGGQQ 393
+ S P Q G P GG Q
Sbjct: 85 DKSRSPRSPPGKPQ-GPPPQGGNQ 107
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 77.8 bits (190), Expect = 3e-14
Identities = 61/157 (38%), Positives = 68/157 (43%), Gaps = 24/157 (15%)
Query: 584 QLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPG--PILRPQN-P 640
Q PPQ P + A G P P G PP P GPP PPPG P LRP P
Sbjct: 390 QQAPPQSVPPSQIQAPPMPGPP-PLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPGMP 448
Query: 641 GANPQLRSLLLNPPPP----------QTGVPP---PQASLHHLQPPGAPALLPPPHQGLG 687
G L LL PPP G+PP P+ L PP AP +PPP G+
Sbjct: 449 GLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPP-APPGIPPPRPGMM 507
Query: 688 QPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGP 724
+P L PPL PP L P APLP +LS P
Sbjct: 508 RPPLVPPLGPAPPG------LFPPAPLPNPGVLSAPP 538
Score = 56.2 bits (134), Expect = 1e-07
Identities = 54/173 (31%), Positives = 63/173 (36%), Gaps = 35/173 (20%)
Query: 542 TNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQP-------QPQG 594
++ +Q Q + Q PP LGP RP L P P +P G
Sbjct: 387 SSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPPLRPPGPPTGLPPGPPPGAPPFLRPPG 446
Query: 595 TVGASGATGQPQPQGTAQPPPGAPQGPP-----GAASGPPP--PGPILRPQNPGANPQLR 647
G G + P G PPPG P GPP G GPPP P P L P P P R
Sbjct: 447 MPGLRGPLPRLLPPG---PPPGRPPGPPPGPPPGLPPGPPPRGPPPRLPPPAPPGIPPPR 503
Query: 648 SLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPP 700
++ PP VPP P P L PP P P +L PP
Sbjct: 504 PGMMRPPL----VPP--------LGPAPPGLFPP------APLPNPGVLSAPP 538
Score = 47.0 bits (110), Expect = 6e-05
Identities = 48/166 (28%), Positives = 58/166 (34%), Gaps = 30/166 (18%)
Query: 232 GGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEA 291
G S Q P +PP+ + P PP PP + PG
Sbjct: 382 GTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPP-LRPPG--------------- 425
Query: 292 AKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQL-PPGPP-GAPKPPPASQPSLVST 349
GL P P P PG+ P + P P+L PPGPP G P PP P +
Sbjct: 426 ---PPTGLPPGPPPGAPPFLRPPGM--PGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP 480
Query: 350 VAPGSGLAPTAQPGAPSMAGTVAPGGVS-------GPSPAQLGAPA 388
P G P P AP PG + GP+P L PA
Sbjct: 481 GPPPRGPPPRLPPPAPPGIPPPRPGMMRPPLVPPLGPAPPGLFPPA 526
Score = 45.8 bits (107), Expect = 1e-04
Identities = 53/196 (27%), Positives = 66/196 (33%), Gaps = 40/196 (20%)
Query: 157 ESTTYSGCTTENLVQQIGERGIHFSIVSPRKLPALRLLFEKAAPPALLEPLQPPTDVSQD 216
E + G +T + QQ + + S + +P L APP L P PPT +
Sbjct: 376 EESHSDGTSTASSQQQAPPQSVPPSQIQAPPMPGPPPLGPPPAPP--LRPPGPPTGLPPG 433
Query: 217 PRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPG 276
P + P G GPL P PP P G P LPP PP P
Sbjct: 434 PPPGA--PPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGP--PPGPPPGLPPGPPPRGPP- 488
Query: 277 NLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP---FSQAP-APQLPPGP 332
PR P P PG+ PP + P P L P P
Sbjct: 489 ------------------------PRLPPPAP-----PGIPPPRPGMMRPPLVPPLGPAP 519
Query: 333 PGAPKPPPASQPSLVS 348
PG P P P ++S
Sbjct: 520 PGLFPPAPLPNPGVLS 535
Score = 33.1 bits (74), Expect = 0.97
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 267 PVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAP 326
P+P P N+ + A + +K + P T P +G + P
Sbjct: 140 PLPDMPHAPSNILIQDIPLPGAQPPSILKKTSA---YGPPTRAVSILPLLGHGVPRLPPG 196
Query: 327 QLPPGPPGAPKPPPASQ 343
+ PPGPP P PP Q
Sbjct: 197 RKPPGPPPGPPPPQVVQ 213
Score = 32.7 bits (73), Expect = 1.3
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 570 PILEDQARPSQNLLQLRP-PQPQPQGTVGASGATGQPQPQGTAQP--PPGAPQGPPGAAS 626
P+ + PS L+Q P P QP + + A G P + P G P+ PPG
Sbjct: 140 PLPDMPHAPSNILIQDIPLPGAQPPSILKKTSAYGPPTRAVSILPLLGHGVPRLPPGRKP 199
Query: 627 GPPPPGP 633
PPPGP
Sbjct: 200 PGPPPGP 206
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 76.6 bits (187), Expect = 8e-14
Identities = 68/185 (36%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 564 APPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQP---QGTAQPPPGAPQG 620
+PP L + P ++ PP P P TV +T PQP QGT PP P
Sbjct: 857 SPPPLPCTESSSSMPGLGMVP-PPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPPPPP- 914
Query: 621 PPGAASGPPPP----GPILRPQNPGANPQLRSLLLNPPPPQTG--VPPPQASLHHLQPPG 674
PGA PPPP G + P PGA + PPPP G +PPP PG
Sbjct: 915 LPGAGIPPPPPLPGAGILPLPPLPGAG-------IPPPPPLPGAAIPPPPPL------PG 961
Query: 675 APALLPPPHQGLGQPQLGPPLLH----PPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQ 730
A LPPP G G P PP L PPP A +PP PLPG + P P+P
Sbjct: 962 AGIPLPPPLPGAGIPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI---PPPPPLPG 1016
Query: 731 PGLQP 735
G+ P
Sbjct: 1017 AGIPP 1021
Score = 69.3 bits (168), Expect = 1e-11
Identities = 65/195 (33%), Positives = 76/195 (38%), Gaps = 38/195 (19%)
Query: 563 QAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTV-------GASGATGQPQPQGTAQPPP 615
Q PP G + P + PP P P + GA P P PPP
Sbjct: 898 QPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPP 957
Query: 616 -----GAPQGPPGAASGPPPPGPILRPQNPGAN----PQLRSLLLNPPP--PQTGVPPPQ 664
G P PP +G PPP P+ PGA P L + PPP P G+PPP
Sbjct: 958 PLPGAGIPLPPPLPGAGIPPPPPL-----PGAGIPPPPPLPGAGIPPPPPLPGAGIPPPP 1012
Query: 665 ASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLH----PPPAQSWPAQLPPRAPLPGQMLL 720
PGA PPP G G P PP L PPP A +PP PLPG +
Sbjct: 1013 PL------PGAGIPPPPPLPGAGIPP--PPPLPGAGIPPPPPLPGAGIPPPPPLPGAGI- 1063
Query: 721 SGGPRGPVPQPGLQP 735
P P+P G+ P
Sbjct: 1064 --PPPPPLPGAGIPP 1076
Score = 69.3 bits (168), Expect = 1e-11
Identities = 63/174 (36%), Positives = 71/174 (40%), Gaps = 33/174 (18%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPI------L 635
PP P P GA P P PPP G P PP +G PPP P+
Sbjct: 1021 PPPPLP----GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPP 1076
Query: 636 RPQNPGAN----PQLRSLLLNPPPPQTGV---PPPQASLHHLQP----PGAPALLPPPHQ 684
P PGA P L + PPPP GV PPP + P PGA PPP
Sbjct: 1077 PPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLP 1136
Query: 685 GLGQPQLGPPLLH---PPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
G G P PPL PPP A +PP PLPG + P P+P G+ P
Sbjct: 1137 GAGIPP-PPPLPRVGIPPPPPLPGAGIPPPPPLPGAGI---PPPPPLPGVGIPP 1186
Score = 68.9 bits (167), Expect = 2e-11
Identities = 60/164 (36%), Positives = 68/164 (41%), Gaps = 35/164 (21%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPILRPQNPG 641
PP P P GA P P PPP G P PP +G PPP P+ PG
Sbjct: 977 PPPPLP----GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL-----PG 1027
Query: 642 AN----PQLRSLLLNPPP--PQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPL 695
A P L + PPP P G+PPP PGA PPP G G P PP
Sbjct: 1028 AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL------PGAGIPPPPPLPGAGIPP--PPP 1079
Query: 696 LH----PPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
L PPP A +PP PLPG + P P+P G+ P
Sbjct: 1080 LPGAGIPPPPPLPGAGIPPPPPLPG---VGIPPPPPLPGAGIPP 1120
Score = 68.6 bits (166), Expect = 2e-11
Identities = 56/155 (36%), Positives = 63/155 (40%), Gaps = 32/155 (20%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPILRPQNPG 641
PP P P G P P PPP G P PP +G PPP P+ R P
Sbjct: 1098 PPPPLP----GVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPP 1153
Query: 642 ANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLH---- 697
PP P G+PPP PGA PPP G+G P PP L
Sbjct: 1154 P----------PPLPGAGIPPPPPL------PGAGIPPPPPLPGVGIPP--PPPLPGVGI 1195
Query: 698 PPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPG 732
PPP A +PP PLPG M + P P+P PG
Sbjct: 1196 PPPPPLPGAGIPPPPPLPG-MGIPPAPAPPLPPPG 1229
Score = 67.4 bits (163), Expect = 5e-11
Identities = 58/161 (36%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 590 PQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPILRPQNPGAN- 643
P P GA P P PPP G P PP +G PPP P+ PGA
Sbjct: 965 PLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL-----PGAGI 1019
Query: 644 ---PQLRSLLLNPPP--PQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLH- 697
P L + PPP P G+PPP PGA PPP G G P PP L
Sbjct: 1020 PPPPPLPGAGIPPPPPLPGAGIPPPPPL------PGAGIPPPPPLPGAGIPP--PPPLPG 1071
Query: 698 ---PPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
PPP A +PP PLPG + P P+P G+ P
Sbjct: 1072 AGIPPPPPLPGAGIPPPPPLPGAGI---PPPPPLPGVGIPP 1109
Score = 67.4 bits (163), Expect = 5e-11
Identities = 59/158 (37%), Positives = 65/158 (41%), Gaps = 33/158 (20%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPILRPQNPG 641
PP P P GA P P PPP G P PP +G PPP P+ PG
Sbjct: 1120 PPPPLP----GAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPL-----PG 1170
Query: 642 AN----PQLRSLLLNPPPPQTGV---PPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPP 694
A P L + + PPPP GV PPP PGA PPP G+G P P
Sbjct: 1171 AGIPPPPPLPGVGIPPPPPLPGVGIPPPPPL-------PGAGIPPPPPLPGMGIPPAPAP 1223
Query: 695 LLHPPPAQSWPAQLPPRAPLPGQMLLS--GGPRGPVPQ 730
L PPP P PP P+ G LL G P PQ
Sbjct: 1224 PL-PPPGTGIPP--PPLLPVSGPPLLPQVGSSTLPTPQ 1258
Score = 65.5 bits (158), Expect = 2e-10
Identities = 57/167 (34%), Positives = 67/167 (40%), Gaps = 30/167 (17%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPILRPQNPG 641
PP P P GA P P PPP G P PP +G PPP P+ PG
Sbjct: 1043 PPPPLP----GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL-----PG 1093
Query: 642 AN----PQLRSLLLNPPPPQTGV----PPPQASLHHLQPPGAPAL-LPP----PHQGLGQ 688
A P L + + PPPP G PPP PP P +PP P G+
Sbjct: 1094 AGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPP 1153
Query: 689 PQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
P P PPP A +PP PLPG + P P+P G+ P
Sbjct: 1154 PPPLPGAGIPPPPPLPGAGIPPPPPLPG---VGIPPPPPLPGVGIPP 1197
Score = 55.8 bits (133), Expect = 1e-07
Identities = 52/149 (34%), Positives = 60/149 (40%), Gaps = 31/149 (20%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPP-----GAPQGPPGAASGPPPPGPILR----- 636
PP P P GA P P+ PPP G P PP +G PPP P+
Sbjct: 1131 PPPPLP----GAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPP 1186
Query: 637 -PQNPGAN----PQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQL 691
P PG P L + PPPP G+ P A L PPG + PPP P
Sbjct: 1187 PPPLPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGT-GIPPPPL----LPVS 1241
Query: 692 GPPLLHPPPAQSWPAQ-----LPPRAPLP 715
GPPLL + + P LPP PLP
Sbjct: 1242 GPPLLPQVGSSTLPTPQVCGFLPP--PLP 1268
Score = 49.7 bits (117), Expect = 1e-05
Identities = 49/165 (29%), Positives = 57/165 (34%), Gaps = 22/165 (13%)
Query: 228 LPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQN 287
LP P PLQ + +P PP GA + P P + P +PG
Sbjct: 891 LPSTAIPQPPPLQGTEMLPPPPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPG 950
Query: 288 AVEAAKNQKAGLGPRFSPITPLQQAAPGVG-PPFSQAPAPQLPPGPP----GAPKPPPAS 342
A G G PL PG G PP P +PP PP G P PPP
Sbjct: 951 AAIPPPPPLPGAG------IPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP-- 1002
Query: 343 QPSLVSTVAPGSGLAPTAQ-PGAPSMAGTVAPGGVSGPSPAQLGA 386
PG+G+ P PGA PG P P GA
Sbjct: 1003 --------LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1039
Score = 45.4 bits (106), Expect = 2e-04
Identities = 61/220 (27%), Positives = 72/220 (32%), Gaps = 27/220 (12%)
Query: 182 IVSPRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPV---GGGSAPGP 238
I P LP +L P A + P P + P + G+ LP G G P P
Sbjct: 920 IPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPP 979
Query: 239 LQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG 298
+P PP P GA + P P +PP +PG A G
Sbjct: 980 PLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPG 1038
Query: 299 LGPRFSPITPLQQAA-------PGVG----PPFSQAPAPQLPPGPPGAPKPPPASQPSLV 347
G P PL A PG G PP A P PP P PPP
Sbjct: 1039 AG--IPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPP------ 1090
Query: 348 STVAPGSGLAPTAQ-PGAPSMAGTVAPGGVSGPSPAQLGA 386
PG+G+ P PG PG P P GA
Sbjct: 1091 ---LPGAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGA 1127
Score = 44.3 bits (103), Expect = 4e-04
Identities = 52/177 (29%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 205 EPLQPPTDVSQDP-RHMVLVRGLVLPVGG-GSAPGPLQSKQPVPLPPAAPSGATLSAAPQ 262
EP PPT VS P + L R L+ P GG G APG ++Q + P +L+A P+
Sbjct: 231 EPAAPPTAVSPQPGAFLGLDRFLLGPSGGAGEAPGSPDTEQALSALSDLPE--SLAAEPR 288
Query: 263 QP-LPPVP---PQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGP 318
+P PP P P + P +L AAQ AA+++ + GP + A
Sbjct: 289 EPQQPPSPGGLPVSEAP-SLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRGAGDTDE 347
Query: 319 PFSQAPAPQLPPGPPGAPKPPPASQ--PSLVSTVAPGSGLAPTAQPGAPSMAGTVAP 373
+ P G PG P + P + P A P A S+ G+ AP
Sbjct: 348 EGEEDAFEDAPRGSPGEEWAPEVGEDAPQRLGEEPEEEAQGPDA-PAAASLPGSPAP 403
Score = 43.9 bits (102), Expect = 5e-04
Identities = 67/236 (28%), Positives = 83/236 (35%), Gaps = 48/236 (20%)
Query: 182 IVSPRKLPA-------LRLLFEKAAPPALL------EP-LQPPTDVSQD--PRHMVLVRG 225
IVSPR++ + + + PP+LL +P QPP +S + H V
Sbjct: 788 IVSPRRISVQLDSHQPTQSISQPPPPPSLLWSAGQGQPGSQPPHSISTEFQTSHEHSVSS 847
Query: 226 LVLPVGGGSAPGPL-----QSKQP----VPLPPAAPSGATLSAAPQQPLPPVPPQYQVPG 276
+P PL S P VP PP G T+ P +P PP Q
Sbjct: 848 AFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPLPGMTVPTLPSTAIPQ-PPPLQGTE 906
Query: 277 NLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVG-PPFSQAPAPQLPPGPP-- 333
L A G G P+ PL PG G PP P +PP PP
Sbjct: 907 MLPPPPPPLPGAGIPPPPPLPGAG--ILPLPPL----PGAGIPPPPPLPGAAIPPPPPLP 960
Query: 334 --GAPKPPPASQPSLVSTVAPGSGLAPTAQ-PGAPSMAGTVAPGGVSGPSPAQLGA 386
G P PPP PG+G+ P PGA PG P P GA
Sbjct: 961 GAGIPLPPP----------LPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGA 1006
Score = 43.5 bits (101), Expect = 7e-04
Identities = 54/191 (28%), Positives = 63/191 (32%), Gaps = 80/191 (41%)
Query: 615 PGAPQGPPGAASGP--------------------------------PPPGPIL----RPQ 638
PG P PPGA SGP PPP P L
Sbjct: 764 PGRPPCPPGAESGPQTKFCSEISLIVSPRRISVQLDSHQPTQSISQPPPPPSLLWSAGQG 823
Query: 639 NPGANP--------------QLRSLLLN------PPP----------PQTG-VPPPQASL 667
PG+ P + S N PPP P G VPPP L
Sbjct: 824 QPGSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPPLPCTESSSSMPGLGMVPPPPPPL 883
Query: 668 HHLQPPGAPALL---PPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGP 724
+ P P+ PPP Q G +L PPP A +PP PLPG +L P
Sbjct: 884 PGMTVPTLPSTAIPQPPPLQ-------GTEMLPPPPPPLPGAGIPPPPPLPGAGIL---P 933
Query: 725 RGPVPQPGLQP 735
P+P G+ P
Sbjct: 934 LPPLPGAGIPP 944
Score = 43.5 bits (101), Expect = 7e-04
Identities = 48/152 (31%), Positives = 57/152 (37%), Gaps = 22/152 (14%)
Query: 231 GGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVE 290
G G P P + +P PP P GA + P P +PP +PG
Sbjct: 1137 GAGIPPPPPLPRVGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGVGI 1195
Query: 291 AAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPP----PASQPSL 346
G G P PL PG+G P PAP P PPG PP P S P L
Sbjct: 1196 PPPPPLPGAG--IPPPPPL----PGMGIP----PAPAPPLPPPGTGIPPPPLLPVSGPPL 1245
Query: 347 VSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSG 378
+ V GS PT P + G + P SG
Sbjct: 1246 LPQV--GSSTLPT-----PQVCGFLPPPLPSG 1270
Score = 40.4 bits (93), Expect = 0.006
Identities = 43/153 (28%), Positives = 51/153 (33%), Gaps = 14/153 (9%)
Query: 231 GGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVE 290
G G P P +P PP P GA + P P +PP +PG A
Sbjct: 1060 GAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGAGIPPPPPLPGVGIPPPPPLPGAGI 1118
Query: 291 AAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTV 350
G G P PL A PP + P PP P PPP
Sbjct: 1119 PPPPPLPGAG--IPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPP--------- 1167
Query: 351 APGSGLAPTAQ-PGAPSMAGTVAPG-GVSGPSP 381
PG+G+ P PG PG G+ P P
Sbjct: 1168 LPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPP 1200
Score = 40.4 bits (93), Expect = 0.006
Identities = 46/164 (28%), Positives = 58/164 (35%), Gaps = 17/164 (10%)
Query: 231 GGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVE 290
G G P P +P PP P GA + P P +PP +PG A
Sbjct: 1115 GAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGI 1173
Query: 291 AAKNQKAGLGPRFSPITPLQQAAPGVG-PPFSQAPAPQLPPGPP---------GAPKPPP 340
G+G P PL PGVG PP P +PP PP AP PP
Sbjct: 1174 PPPPPLPGVG--IPPPPPL----PGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPP 1227
Query: 341 ASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQL 384
+ P SG Q G+ ++ G + P P+ L
Sbjct: 1228 PGTGIPPPPLLPVSGPPLLPQVGSSTLPTPQVCGFLPPPLPSGL 1271
Score = 40.0 bits (92), Expect = 0.008
Identities = 52/177 (29%), Positives = 63/177 (35%), Gaps = 19/177 (10%)
Query: 231 GGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGN-------LSAAQV 283
G G P P +P PP P GA + P P +PP +PG L A +
Sbjct: 1071 GAGIPPPPPLPGAGIPPPPPLP-GAGIPPPPPLPGVGIPPPPPLPGAGIPPPPPLPGAGI 1129
Query: 284 AAQNAVEAAKNQKAGLGPRFS--PITPLQQAAPGVGPPFSQAPAPQLPPGPPGA-PKPPP 340
+ A PR P PL A PP A P PP P P PPP
Sbjct: 1130 PPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGVGIPPPPP 1189
Query: 341 ASQPSL-VSTVAPGSGLAPTAQ-PG---APSMAGTVAPGGVSGPSPAQL---GAPAL 389
+ PG+G+ P PG P+ A + P G P P L G P L
Sbjct: 1190 LPGVGIPPPPPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLL 1246
Score = 39.7 bits (91), Expect = 0.010
Identities = 30/80 (37%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQL 646
PP P P GA P P P P P PPG +G PPP P+L P PQ+
Sbjct: 1197 PPPPLP----GAGIPPPPPLPGMGIPPAPAPPLPPPG--TGIPPP-PLLPVSGPPLLPQV 1249
Query: 647 RSLLLNPPPPQTGVPPPQAS 666
S L P +PPP S
Sbjct: 1250 GSSTLPTPQVCGFLPPPLPS 1269
Score = 30.4 bits (67), Expect = 6.3
Identities = 44/173 (25%), Positives = 60/173 (34%), Gaps = 18/173 (10%)
Query: 546 QVQQQKLEQQQRGMGGQQAPP-GLGPILEDQARPSQNLLQLRPPQPQPQGTVG-ASGATG 603
Q+QQQ+ +QQ +G APP + P +P L L P G G A G+
Sbjct: 216 QLQQQQQQQQLQGAEEPAAPPTAVSP------QPGA-FLGLDRFLLGPSGGAGEAPGSPD 268
Query: 604 QPQPQGTAQPPPGAPQGPPGAASGPPPPG--PILR-PQNPGANPQLRSLLLNPPPPQTGV 660
Q P + P PP PG P+ P P A P + P T
Sbjct: 269 TEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKD-----SPSSTAF 323
Query: 661 PPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAP 713
P P+A + GAP G+ P + W ++ AP
Sbjct: 324 PFPEAGPGE-EAAGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDAP 375
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 73.6 bits (179), Expect = 6e-13
Identities = 71/212 (33%), Positives = 81/212 (38%), Gaps = 41/212 (19%)
Query: 557 RGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQP------------QPQGTVGASGATGQ 604
+G Q PP E Q N Q PP+P Q QG G
Sbjct: 84 QGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEG 143
Query: 605 PQPQGTAQ-----PPPGAPQGPP----GAASGPPP-PGPILRPQNPGANPQLRSLLLNPP 654
P PQG Q P PG P+GPP + GPPP PG P G N P
Sbjct: 144 PPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQS------QGP 197
Query: 655 PPQTGVP---PPQASLHHLQPPGAPALLP-PPHQGLGQPQLGPPLLHPPPAQSWPAQ--- 707
PP+ G P PPQ PP P PP QG +PQ PP HP Q P Q
Sbjct: 198 PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPP--HPGKPQGPPPQEGN 255
Query: 708 LPPRAPLPGQML----LSGGPRGPVPQPGLQP 735
P R P PG+ G P+ P+P P +P
Sbjct: 256 KPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKP 287
Score = 68.2 bits (165), Expect = 3e-11
Identities = 69/198 (34%), Positives = 77/198 (38%), Gaps = 44/198 (22%)
Query: 556 QRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQ--- 612
Q G Q+ PP G + + RP Q Q + P P+P G P PQG Q
Sbjct: 42 QGGNQPQRTPPPPG---KPEGRPPQGGNQSQGPPPRP-------GKPEGPPPQGGNQSQG 91
Query: 613 --PPPGAPQGPP--GAAS--GPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGV---PPP 663
P PG P+G P G GPPP RP P P PPP+ G PPP
Sbjct: 92 PPPRPGKPEGQPPQGGNQSQGPPP-----RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPP 146
Query: 664 QASLHHLQPPGAPALLP-PPHQGLGQPQLGPPLLH------PPPAQSWPAQLPPRAPLPG 716
Q PP P PP QG Q Q PP H PPP +Q PP P
Sbjct: 147 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPP--HPGKPEGPPPQGGNQSQGPPPRP--- 201
Query: 717 QMLLSGGPRGPVPQPGLQ 734
G P GP PQ G Q
Sbjct: 202 -----GKPEGPPPQGGNQ 214
Score = 67.8 bits (164), Expect = 4e-11
Identities = 61/186 (32%), Positives = 72/186 (38%), Gaps = 31/186 (16%)
Query: 562 QQAPPGLGPILEDQARPSQNLLQLRPPQP-QPQGTVGASGATGQPQPQGTAQPPPGAPQG 620
+++P + E + N Q PP P +P+G G Q P P PG P+G
Sbjct: 26 EESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPP-----PRPGKPEG 80
Query: 621 PP----GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGV---PPPQASLHHLQPP 673
PP + GPPP RP P P PPP+ G PPPQ PP
Sbjct: 81 PPPQGGNQSQGPPP-----RPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 135
Query: 674 GAPALLP-PPHQGLGQPQLGPPL----LHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPV 728
P PP QG Q Q PP PPP +Q PP P G P GP
Sbjct: 136 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHP--------GKPEGPP 187
Query: 729 PQPGLQ 734
PQ G Q
Sbjct: 188 PQGGNQ 193
Score = 63.9 bits (154), Expect = 5e-10
Identities = 56/152 (36%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQP--QPQGTVGASGATGQPQPQGTAQ----- 612
G + PP G P + PPQ Q QG G P PQG Q
Sbjct: 160 GKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPP 219
Query: 613 PPPGAPQGPPGAASGPPPPGPILRPQNP-GANPQLRSLLLNPPPP--QTGVPPPQASLHH 669
P PG P+GPP + G P GP P P G PQ + PPPP G PPP +
Sbjct: 220 PRPGKPEGPP-SQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQ 278
Query: 670 LQPP--GAPALLPPPHQGLGQPQLGPPLLHPP 699
PP G P PPP QG G+P PP PP
Sbjct: 279 PLPPPAGKPQGPPPPPQG-GRPH-RPPQGQPP 308
Score = 62.8 bits (151), Expect = 1e-09
Identities = 60/177 (33%), Positives = 68/177 (38%), Gaps = 28/177 (15%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQP--QPQGTVGASGATGQPQPQGTAQ----- 612
G + PP G P + PPQ Q QG G P PQG Q
Sbjct: 139 GKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPP 198
Query: 613 PPPGAPQGPP----GAASGPPP-PGPILRPQNPGAN-PQLRSLLLNPPP----PQTGVPP 662
P PG P+GPP + GPPP PG P + G N PQ PPP PQ G PP
Sbjct: 199 PRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQ------GPPPHPGKPQ-GPPP 251
Query: 663 PQASLHHLQPPGAPALLPPPHQGLGQ----PQLGPPLLHPPPAQSWPAQLPPRAPLP 715
+ + PP PPP G Q P G P PPP Q PP+ P
Sbjct: 252 QEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHRPPQGQPP 308
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/175 (29%), Positives = 55/175 (31%), Gaps = 31/175 (17%)
Query: 233 GSAPGPLQSKQPVPLPPAAPSGATLSAAPQ-QPLPPVPPQYQVP----GNLSAAQVAAQN 287
G P Q P PP P G Q Q PP P + + P GN S
Sbjct: 38 GRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPG 97
Query: 288 AVEAAK----NQKAGLGPRFSPITPLQQAAPGV--GPPFSQAPAPQLPPGPPGAPK--PP 339
E NQ G PR PG GPP Q PP PG P+ PP
Sbjct: 98 KPEGQPPQGGNQSQGPPPR-----------PGKPEGPPPQGGNQSQGPPPRPGKPEGPPP 146
Query: 340 PASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQS 394
S PG P Q G S PG GP P GG QS
Sbjct: 147 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQ-------GGNQS 194
Score = 42.0 bits (97), Expect = 0.002
Identities = 45/163 (27%), Positives = 52/163 (31%), Gaps = 13/163 (7%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVP----GNLSAAQVA 284
P GG + GP PP P G S P PP P + + P GN S
Sbjct: 104 PQGGNQSQGPPPRPGKPEGPP--PQGGNQSQGP----PPRPGKPEGPPPQGGNQSQGPPP 157
Query: 285 AQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQP 344
E Q P + P G SQ P P+ PG P P PP
Sbjct: 158 RPGKPEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPR--PGKPEGP-PPQGGNQ 214
Query: 345 SLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAP 387
S PG P +Q G PG GP P + P
Sbjct: 215 SQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKP 257
Score = 41.6 bits (96), Expect = 0.003
Identities = 49/168 (29%), Positives = 53/168 (31%), Gaps = 28/168 (16%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVP----GNLSAAQVA 284
P GG + GP PP P G S P PP P + + P GN S
Sbjct: 146 PQGGNQSQGPPPRPGKPEGPP--PQGGNQSQGP----PPHPGKPEGPPPQGGNQSQGPPP 199
Query: 285 AQNAVEAAK----NQKAGLGPRFSPITPLQQAAPGV--GPPFSQAPAPQLPPGPPGAPK- 337
E NQ G PR PG GPP PQ PP PG P+
Sbjct: 200 RPGKPEGPPPQGGNQSQGPPPR-----------PGKPEGPPSQGGNKPQGPPPHPGKPQG 248
Query: 338 PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLG 385
PPP PG P G P G GP P G
Sbjct: 249 PPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQG 296
Score = 36.6 bits (83), Expect = 0.087
Identities = 42/144 (29%), Positives = 49/144 (34%), Gaps = 18/144 (12%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVP----GNLSAAQVA 284
P GG + GP PP P G S P PP P + + P GN S
Sbjct: 167 PQGGNQSQGPPPHPGKPEGPP--PQGGNQSQGP----PPRPGKPEGPPPQGGNQSQGPPP 220
Query: 285 AQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGP---PGAPKPPPA 341
E +Q G P+ P P + GPP + PQ PP P G P P
Sbjct: 221 RPGKPEGPPSQ-GGNKPQGPPPHPGKPQ----GPPPQEGNKPQRPPPPGRPQGPPPPGGN 275
Query: 342 SQPSLVSTVAPGSGLAPTAQPGAP 365
Q L G P Q G P
Sbjct: 276 PQQPLPPPAGKPQGPPPPPQGGRP 299
Score = 33.5 bits (75), Expect = 0.74
Identities = 37/126 (29%), Positives = 42/126 (33%), Gaps = 16/126 (12%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVP----GNLSAAQVA 284
P GG + GP PP P G S P PP P + + P GN
Sbjct: 188 PQGGNQSQGPPPRPGKPEGPP--PQGGNQSQGP----PPRPGKPEGPPSQGGNKPQGPPP 241
Query: 285 AQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAP----QLPPGPP--GAPKP 338
+ Q+ R P Q P G P P P Q PP PP G P
Sbjct: 242 HPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGRPHR 301
Query: 339 PPASQP 344
PP QP
Sbjct: 302 PPQGQP 307
Score = 31.2 bits (69), Expect = 3.7
Identities = 27/91 (29%), Positives = 34/91 (37%), Gaps = 11/91 (12%)
Query: 310 QQAAPGV--GPPFSQAPA----PQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPG 363
Q+ +P V G P + P PQ P PPG P +P + G P G
Sbjct: 25 QEESPSVISGKPEGRRPQGGNQPQRTPPPPGKP----EGRPPQGGNQSQGPPPRPGKPEG 80
Query: 364 APSMAGTVAPGGVSGPSPAQLGAPALGGQQS 394
P G + G P + G P GG QS
Sbjct: 81 PPPQGGNQSQGPPPRPGKPE-GQPPQGGNQS 110
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 73.2 bits (178), Expect = 8e-13
Identities = 54/154 (35%), Positives = 62/154 (40%), Gaps = 24/154 (15%)
Query: 587 PPQPQPQGTVGASGATGQPQPQGTAQPPPG-----------APQGPPGAASGPPPPGPIL 635
PP P P+ GA A P T PPP AP+ AA+ PP PGP
Sbjct: 108 PPAP-PRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPA- 165
Query: 636 RPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPL 695
PG Q R+ L PPP PP A PP P PPP +P L PP
Sbjct: 166 ---QPGPRAQ-RAAPLAAPPPAPAAPPAVA------PPAGPRRAPPPAVAAREPPLPPPP 215
Query: 696 LHP-PPAQSWPAQLPPRAPLPGQMLLSGGPRGPV 728
P PP Q P P+ P G + +GG PV
Sbjct: 216 QPPAPPQQQQPPPPQPQPPPEGGAVRAGGAARPV 249
Score = 58.9 bits (141), Expect = 2e-08
Identities = 61/197 (30%), Positives = 72/197 (36%), Gaps = 31/197 (15%)
Query: 207 LQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLP--PAAPSGATLSAAPQQP 264
+QPP + P RG +AP P + P P P AAP+ A +AA
Sbjct: 99 VQPPRRGATPPAPPRAPRGAPA-AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAAT 157
Query: 265 LPPVP-PQYQVPGNLSAAQVAAQNAVEAAKNQKA-GLGPRFSPITPLQQAAPGVGPPFSQ 322
PP P P P AA +AA AA A GPR +P PP
Sbjct: 158 APPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAP------------PPAVA 205
Query: 323 APAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPA 382
A P LPP PP P PP QP P QP P G V GG + P
Sbjct: 206 AREPPLPP-PPQPPAPPQQQQP-------------PPPQPQPPPEGGAVRAGGAARPVSL 251
Query: 383 QLGAPALGGQQSVSNKL 399
+ LGG +L
Sbjct: 252 REVVRYLGGSGGAGGRL 268
Score = 55.5 bits (132), Expect = 2e-07
Identities = 51/150 (34%), Positives = 60/150 (40%), Gaps = 36/150 (24%)
Query: 599 SGATGQPQPQGTAQP-PPGAPQGPPGAASGP-PPPGPILRPQNPGANPQLRSLLLNPPPP 656
+ A QP +G P PP AP+G P AA+ PPP P PPPP
Sbjct: 95 NAARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPA------------------PPPP 136
Query: 657 QTGVPPPQASLHHLQPP--GAPALLPPPHQGLGQP----QLGPPLLHPPPAQSWPAQLPP 710
P P A+ + P A A PP G QP Q PL PPPA + P + P
Sbjct: 137 ----PAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAP 192
Query: 711 -----RAPLPGQMLLSGGPRGPVPQPGLQP 735
RAP P + P P PQP P
Sbjct: 193 PAGPRRAPPPA-VAAREPPLPPPPQPPAPP 221
Score = 37.4 bits (85), Expect = 0.051
Identities = 30/82 (36%), Positives = 32/82 (39%), Gaps = 12/82 (14%)
Query: 313 APGVGPPFSQAPAPQLPPGPPGAP------KPPPASQPSLVSTVAPGSGLAPTAQPGAPS 366
A V PP A P P P GAP PPP P AP + AP P A +
Sbjct: 96 AARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPP--PPPAPVAAAAPARAPRAAA 153
Query: 367 MAGTVAPGGVSGPSPAQLGAPA 388
A T P P PAQ G A
Sbjct: 154 AAATAPP----SPGPAQPGPRA 171
Score = 32.7 bits (73), Expect = 1.3
Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 17/87 (19%)
Query: 564 APPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPG 623
APP + P + P + PP P P PQP P P Q PP
Sbjct: 186 APPAVAPPAGPRRAPPPAVAAREPPLPPP------------PQP-----PAPPQQQQPPP 228
Query: 624 AASGPPPPGPILRPQNPGANPQLRSLL 650
PPP G +R LR ++
Sbjct: 229 PQPQPPPEGGAVRAGGAARPVSLREVV 255
>gi|41349486 proline-rich protein BstNI subfamily 1 isoform 3
preproprotein [Homo sapiens]
Length = 178
Score = 72.8 bits (177), Expect = 1e-12
Identities = 68/172 (39%), Positives = 76/172 (44%), Gaps = 39/172 (22%)
Query: 579 SQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPP----GAPQGPP--GAASGPPPPG 632
S +L+ P P PQG + G P P G Q PP PQGPP G GPPP G
Sbjct: 28 SPSLIAGNPQGPSPQG---GNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 84
Query: 633 PILR-PQNPGANPQLRSLLLNPPPPQTGVP--PP----QASLHHLQPPGAPALLPPPHQG 685
R P++P PQ PPPQ G P PP S PPG P PP Q
Sbjct: 85 DKSRSPRSPPGKPQ-------GPPPQGGKPQGPPAQGGSKSQSARSPPGKPQ--GPPQQE 135
Query: 686 LGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPV-PQPGLQPS 736
PQ GP PPPA P Q P+AP GQ P+GP P G +PS
Sbjct: 136 GNNPQ-GP----PPPAGGNPQQ--PQAPPAGQ------PQGPPRPPQGGRPS 174
Score = 56.6 bits (135), Expect = 8e-08
Identities = 53/146 (36%), Positives = 60/146 (41%), Gaps = 30/146 (20%)
Query: 561 GQQAPPGL--GPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPP--G 616
G PPG GP + +P +P P PQG S + +PQG PPP G
Sbjct: 49 GPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQG---PPPQGG 105
Query: 617 APQGPPG-------AASGPP--PPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASL 667
PQGPP +A PP P GP PQ G NPQ PPP G P Q
Sbjct: 106 KPQGPPAQGGSKSQSARSPPGKPQGP---PQQEGNNPQ-------GPPPPAGGNPQQP-- 153
Query: 668 HHLQPPGAPALLPPPHQGLGQPQLGP 693
P G P P P QG G+P P
Sbjct: 154 -QAPPAGQPQGPPRPPQG-GRPSRPP 177
Score = 47.0 bits (110), Expect = 6e-05
Identities = 45/162 (27%), Positives = 52/162 (32%), Gaps = 30/162 (18%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAA--PQQPLPPVPPQYQVPGNLSAAQVAAQ 286
P GG GP P PP P G PQ P PP PQ P
Sbjct: 41 PQGGNKPQGP-------PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP----------- 82
Query: 287 NAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSL 346
++ P P P Q GPP Q PPG P+ PP + +
Sbjct: 83 ----QGDKSRSPRSPPGKPQGPPPQGGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNN 138
Query: 347 VSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPA 388
P +G P QP AP P P P Q G P+
Sbjct: 139 PQGPPPPAGGNP-QQPQAPPAGQPQGP-----PRPPQGGRPS 174
Score = 41.6 bits (96), Expect = 0.003
Identities = 31/84 (36%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Query: 317 GPPFSQAPAPQLPPGPPGAPK-PPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGG 375
GP PQ PP PPG P+ PPP PG P Q G S + PG
Sbjct: 38 GPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQ-GDKSRSPRSPPGK 96
Query: 376 VSGPSP---AQLGAPALGGQQSVS 396
GP P G PA GG +S S
Sbjct: 97 PQGPPPQGGKPQGPPAQGGSKSQS 120
Score = 35.4 bits (80), Expect = 0.19
Identities = 26/81 (32%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Query: 317 GPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGV 376
GPP PQ PP P PPP S PG P Q G P G A GG
Sbjct: 59 GPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQ--GPPAQGGS 116
Query: 377 SGPSPAQLGAPALGGQQSVSN 397
S G Q N
Sbjct: 117 KSQSARSPPGKPQGPPQQEGN 137
Score = 31.2 bits (69), Expect = 3.7
Identities = 26/74 (35%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQPQ---PQGTVGASGATGQP-------QPQG 609
G Q PP G AR Q PPQ + PQG +G Q QPQG
Sbjct: 105 GKPQGPPAQGGSKSQSARSPPGKPQ-GPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQG 163
Query: 610 TAQPPPGA-PQGPP 622
+PP G P PP
Sbjct: 164 PPRPPQGGRPSRPP 177
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 71.2 bits (173), Expect = 3e-12
Identities = 62/172 (36%), Positives = 71/172 (41%), Gaps = 30/172 (17%)
Query: 577 RPSQNLLQLRPPQP--QPQGTVGASGATGQPQPQGTAQPPPGAPQGPP----GAASGPPP 630
RP RPP P +PQG G Q P PPPG P+G P + GPPP
Sbjct: 40 RPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPP-----PPPGKPEGRPPQGGNQSQGPPP 94
Query: 631 -PGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLP-PPHQGLGQ 688
PG RP G N +S PPP + PPPQ +PP P PP QG Q
Sbjct: 95 HPGKPERPPPQGGN---QSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQ 151
Query: 689 PQLGPPLLHP-----PPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
Q PP HP PP Q R+P G P+GP Q G +P
Sbjct: 152 SQGPPP--HPGKPEGPPPQEGNKSRSARSP-------PGKPQGPPQQEGNKP 194
Score = 70.9 bits (172), Expect = 4e-12
Identities = 64/197 (32%), Positives = 76/197 (38%), Gaps = 25/197 (12%)
Query: 556 QRGMGGQQAPPGLGPILEDQARPSQ--NLLQLRPPQP-QPQGTVGASGATGQPQPQGTAQ 612
+R GG Q P + Q P Q N Q PP P +P+G G Q P +
Sbjct: 39 RRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGK 98
Query: 613 PPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQP 672
P PQG + PPPPG RP G N R PPP + PPPQ P
Sbjct: 99 PERPPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRP---PPPPGKPERPPPQGGNQSQGP 155
Query: 673 PGAPALL--PPPHQG---------LGQPQLGPPLLHPPPAQSWPAQLPPRAPLPG----- 716
P P PPP +G G+PQ GPP Q P P+ P P
Sbjct: 156 PPHPGKPEGPPPQEGNKSRSARSPPGKPQ-GPPQQEGNKPQGPPPPGKPQGPPPAGGNPQ 214
Query: 717 --QMLLSGGPRGPVPQP 731
Q +G P+GP P P
Sbjct: 215 QPQAPPAGKPQGPPPPP 231
Score = 66.2 bits (160), Expect = 1e-10
Identities = 57/153 (37%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 602 TGQPQ---PQGTAQP-----PPGAPQGPP----GAASGPPPPGPILRPQNPGANPQLRSL 649
+G+P+ PQG QP PPG PQGPP + GPPPP P P P
Sbjct: 33 SGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPP-----PGKPEGRPPQGGN 87
Query: 650 LLNPPPPQTGV---PPPQA---SLHHLQPPGAPALLPPPHQGLGQPQLGPP----LLHPP 699
PPP G PPPQ S PPG P PP QG Q PP PP
Sbjct: 88 QSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPE--RPPPQGGNQSHRPPPPPGKPERPP 145
Query: 700 PAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPG 732
P +Q PP P G P GP PQ G
Sbjct: 146 PQGGNQSQGPPPHP--------GKPEGPPPQEG 170
Score = 62.8 bits (151), Expect = 1e-09
Identities = 60/188 (31%), Positives = 72/188 (38%), Gaps = 34/188 (18%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQPQP--------------QGTVGASGATGQP 605
GG Q+ P + + RP Q Q + P P P QGT G +P
Sbjct: 64 GGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPGKPERP 123
Query: 606 QPQGTAQ-----PPPGAPQGPP----GAASGPPP-PGPILRPQNPGANPQLRSLLLNPPP 655
PQG Q PPPG P+ PP + GPPP PG +P+ P +S PP
Sbjct: 124 PPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPG---KPEGPPPQEGNKSRSARSPP 180
Query: 656 PQTGVPPPQASLHHL--QPPGAPALLPPPHQGLGQ----PQLGPPLLHPPPAQSWPAQLP 709
+ PP Q PPG P PPP G Q P G P PPP Q P
Sbjct: 181 GKPQGPPQQEGNKPQGPPPPGKP-QGPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRP 239
Query: 710 PRAPLPGQ 717
+ P Q
Sbjct: 240 AQGQQPPQ 247
Score = 44.7 bits (104), Expect = 3e-04
Identities = 56/181 (30%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 212 DVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPP- 270
DVSQ+ + L+ G G G Q ++P P PP P G Q PP PP
Sbjct: 22 DVSQE-ESLFLISG---KPEGRRPQGGNQPQRPPP-PPGKPQGPPPQGGNQSQGPPPPPG 76
Query: 271 --QYQVP--GNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPF--SQAP 324
+ + P GN S E Q G S TP P PP +Q+
Sbjct: 77 KPEGRPPQGGNQSQGPPPHPGKPERPPPQ----GGNQSQGTPPPPGKPERPPPQGGNQSH 132
Query: 325 APQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQL 384
P PPG P P PP S PG P Q G S + PG GP P Q
Sbjct: 133 RPPPPPGKPERP-PPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGP-PQQE 190
Query: 385 G 385
G
Sbjct: 191 G 191
Score = 36.6 bits (83), Expect = 0.087
Identities = 46/157 (29%), Positives = 58/157 (36%), Gaps = 21/157 (13%)
Query: 200 PPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPL---QSKQPVPLP-----PAA 251
PP +P +PP P+ +G P G P P QS +P P P P
Sbjct: 93 PPHPGKPERPP------PQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPERPPP 146
Query: 252 PSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQ 311
G P P P P Q GN S + + + Q+ G P+ P Q
Sbjct: 147 QGGNQSQGPPPHPGKPEGPPPQ-EGNKSRSARSPPGKPQGPPQQE-GNKPQGPPPPGKPQ 204
Query: 312 AAPGVG--PPFSQAPA---PQLPPGPPGAPKPPPASQ 343
P G P QAP PQ PP PP +PP +Q
Sbjct: 205 GPPPAGGNPQQPQAPPAGKPQGPPPPPQGGRPPRPAQ 241
Score = 35.8 bits (81), Expect = 0.15
Identities = 27/80 (33%), Positives = 28/80 (35%), Gaps = 9/80 (11%)
Query: 317 GPPFSQAPAPQLPPGPPGAP--KPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPG 374
GPP Q PP PPG P +PP S PG P Q G S PG
Sbjct: 59 GPPPQGGNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGTPPPPG 118
Query: 375 GVSGPSPAQLGAPALGGQQS 394
P P GG QS
Sbjct: 119 KPERPPPQ-------GGNQS 131
Score = 34.7 bits (78), Expect = 0.33
Identities = 45/164 (27%), Positives = 52/164 (31%), Gaps = 29/164 (17%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVP--GNLSAAQVAAQ 286
P GG + G PP P G S P P PP P+ P GN S
Sbjct: 104 PQGGNQSQGTPPPPGKPERPP--PQGGNQSHRP--PPPPGKPERPPPQGGNQSQGPPPHP 159
Query: 287 NAVEAAKNQ-----KAGLGPRFSPITPLQQAA--PGVGPPFSQAPAPQLPPGPPGAPKPP 339
E Q ++ P P P QQ P PP + P G P P+ P
Sbjct: 160 GKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQGPPPAGGNPQQPQAP 219
Query: 340 PASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQ 383
PA +P G P Q G P P G P Q
Sbjct: 220 PAGKP---------QGPPPPPQGGRP-------PRPAQGQQPPQ 247
Score = 32.7 bits (73), Expect = 1.3
Identities = 22/69 (31%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 326 PQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLG 385
PQ PP PPG P+ PP + G P G P G + G P +
Sbjct: 47 PQRPPPPPGKPQGPPPQG----GNQSQGPPPPPGKPEGRPPQGGNQSQGPPPHPGKPE-R 101
Query: 386 APALGGQQS 394
P GG QS
Sbjct: 102 PPPQGGNQS 110
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 70.9 bits (172), Expect = 4e-12
Identities = 59/185 (31%), Positives = 66/185 (35%), Gaps = 32/185 (17%)
Query: 232 GGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAA-----Q 286
G PGP QS P+PP P PQQP P PP +Q P + Q Q
Sbjct: 45 GPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQ 104
Query: 287 NAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAP-------APQLPPG----PPGA 335
++ + Q G P P +AP PP S AP P PP PPGA
Sbjct: 105 DSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGA 164
Query: 336 PKPPPASQ-----------PSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQL 384
P P P S P PG G P PG G PG GP P
Sbjct: 165 PPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPG---GPKPG-- 219
Query: 385 GAPAL 389
G P L
Sbjct: 220 GGPGL 224
Score = 65.5 bits (158), Expect = 2e-10
Identities = 59/188 (31%), Positives = 70/188 (37%), Gaps = 34/188 (18%)
Query: 554 QQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQP 613
QQQ+ QQ PP P + P + Q PP PQ + G P
Sbjct: 67 QQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPG---------P 117
Query: 614 PPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPP 673
PG PP ++S PP P GA P P T PPP + PP
Sbjct: 118 APGVGSAPPASSSAPPAT-----PPTSGAPP-------GSGPGPTPTPPPAVTS---APP 162
Query: 674 GAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPV----P 729
GAP PP G P P PPP PA +P P P Q GGP+G P
Sbjct: 163 GAP---PPTPPSSGVPTTPPQAGGPPPP---PAAVPGPGPGPKQGPGPGGPKGGKMPGGP 216
Query: 730 QPGLQPSV 737
+PG P +
Sbjct: 217 KPGGGPGL 224
Score = 64.3 bits (155), Expect = 4e-10
Identities = 66/201 (32%), Positives = 77/201 (38%), Gaps = 53/201 (26%)
Query: 544 HKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQ-------PQGTV 596
H+Q QQ QQ PP P + P + Q PP PQ QG
Sbjct: 66 HQQQQQPP---------PQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPG 116
Query: 597 GASGATGQPQPQGTAQP-PPGAPQGPPGAASGP-PPPGPILRPQNPGANPQLRSLLLNPP 654
A G P +A P P PPG+ GP P P P + PGA P P
Sbjct: 117 PAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPP--------PT 168
Query: 655 PPQTGVP--PPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRA 712
PP +GVP PPQA PP PA +P P G P+ GP P
Sbjct: 169 PPSSGVPTTPPQAG----GPPPPPAAVPGPGPG---PKQGP---------------GPGG 206
Query: 713 PLPGQMLLSGGPRGPVPQPGL 733
P G+M GGP+ P PGL
Sbjct: 207 PKGGKM--PGGPK-PGGGPGL 224
Score = 57.4 bits (137), Expect = 5e-08
Identities = 54/169 (31%), Positives = 65/169 (38%), Gaps = 17/169 (10%)
Query: 578 PSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRP 637
P L Q R P G G P P Q PP PQ PP P P P +P
Sbjct: 36 PGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPP--PQQPPPQQPPPHQPPPHPQP 93
Query: 638 ---QNPGANPQ--LRSLLLNPPPPQTGV---PPPQASLHHLQPPGAPALLPPPHQGLGQP 689
Q P PQ + ++ P P GV PP +S PP + A PP G G
Sbjct: 94 HQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGA---PPGSGPGPT 150
Query: 690 QLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGP---VPQPGLQP 735
PP + P + P PP + +P +GGP P VP PG P
Sbjct: 151 PTPPPAVTSAPPGA-PPPTPPSSGVPTTPPQAGGPPPPPAAVPGPGPGP 198
Score = 53.9 bits (128), Expect = 5e-07
Identities = 45/136 (33%), Positives = 51/136 (37%), Gaps = 21/136 (15%)
Query: 564 APPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGP-P 622
APPG GP P+ P P P +SG P G PPP A GP P
Sbjct: 141 APPGSGPGPTPTPPPAVTSAPPGAPPPTPP----SSGVPTTPPQAGGPPPPPAAVPGPGP 196
Query: 623 GAASGPPPPGP----ILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPAL 678
G GP P GP + PG P L + +P PP G P+ H
Sbjct: 197 GPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGEPRGGRQH--------- 247
Query: 679 LPPPHQGLGQPQLGPP 694
PP HQ Q GPP
Sbjct: 248 HPPYHQ---QHHQGPP 260
Score = 50.4 bits (119), Expect = 6e-06
Identities = 42/137 (30%), Positives = 47/137 (34%), Gaps = 19/137 (13%)
Query: 613 PPPG-------APQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQA 665
PPPG P GP SGP PP P P P + PPP P PQ
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQP 93
Query: 666 SLHHLQPPGAP--------ALLPPPHQGLGQ---PQLGPPLLHPPPAQSWPAQLPPRAPL 714
QPP P A P P G+G P PP + + P P P
Sbjct: 94 H-QQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPT 152
Query: 715 PGQMLLSGGPRGPVPQP 731
P + S P P P P
Sbjct: 153 PPPAVTSAPPGAPPPTP 169
Score = 47.4 bits (111), Expect = 5e-05
Identities = 61/209 (29%), Positives = 71/209 (33%), Gaps = 64/209 (30%)
Query: 200 PPALLEP--LQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATL 257
PP +P Q P QD V+ +G G GSAP P S P PP SGA
Sbjct: 87 PPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAP-PASSSAPPATPPT--SGAPP 143
Query: 258 SAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVG 317
+ P P P PP + A PG
Sbjct: 144 GSGP-GPTPTPPP-------------------------------------AVTSAPPGAP 165
Query: 318 PPFSQAPAPQLPPGPP--GAPKPPPASQPSLVSTVAPGSGLAPTAQPGAP---SMAGTVA 372
PP P+ +P PP G P PPPA+ P PG G PG P M G
Sbjct: 166 PP--TPPSSGVPTTPPQAGGPPPPPAAVP------GPGPGPKQGPGPGGPKGGKMPGGPK 217
Query: 373 PGGVSGPS--------PAQLGAPALGGQQ 393
PGG G S P + G GG+Q
Sbjct: 218 PGGGPGLSTPGGHPKPPHRGGGEPRGGRQ 246
Score = 37.7 bits (86), Expect = 0.039
Identities = 45/155 (29%), Positives = 51/155 (32%), Gaps = 56/155 (36%)
Query: 198 AAPPALLE--PLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGP-----LQSKQPVPLPPA 250
+APPA P PPT + P G G P P + S P PP
Sbjct: 123 SAPPASSSAPPATPPTSGA--------------PPGSGPGPTPTPPPAVTSAPPGAPPPT 168
Query: 251 APSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQ 310
PS + PQ PP PP VPG G GP+ P
Sbjct: 169 PPSSGVPTTPPQAGGPP-PPPAAVPG--------------------PGPGPKQGP----- 202
Query: 311 QAAPGVGPPFSQAPAPQLPPGPPGA------PKPP 339
PG GP + P P G PG PKPP
Sbjct: 203 --GPG-GPKGGKMPGGPKPGGGPGLSTPGGHPKPP 234
Score = 33.9 bits (76), Expect = 0.57
Identities = 35/121 (28%), Positives = 41/121 (33%), Gaps = 43/121 (35%)
Query: 309 LQQAAPGVGP-PFSQAPAPQLPPGPP-----------------------------GAPKP 338
L Q +GP P P P +PP PP +P
Sbjct: 40 LNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQP 99
Query: 339 PPASQPSLVSTVAPGSGLAP----------TAQPGAPSMAGTVAPGGVSGPSPAQLGAPA 388
PP Q S VA G G AP +A P P +G AP G SGP P PA
Sbjct: 100 PPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSG--APPG-SGPGPTPTPPPA 156
Query: 389 L 389
+
Sbjct: 157 V 157
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 70.5 bits (171), Expect = 5e-12
Identities = 69/216 (31%), Positives = 80/216 (37%), Gaps = 47/216 (21%)
Query: 564 APPGLGPILEDQARPSQNLLQLR------PPQPQPQGTVGASGATGQPQ-PQGTAQPP-- 614
+PP P+ PSQ L PP P P + AT PQ P A PP
Sbjct: 678 SPPASPPVSPSATPPSQAPPSLAAPPLQVPPSP-PASPPMSPSATPPPQAPPPLAAPPLQ 736
Query: 615 --PGAPQGPPGAASGPPPPG--------PILRPQNPGANPQLRSLLLNPP--------PP 656
P P PP + S PPP P+ P +P A+ + L PP PP
Sbjct: 737 VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPP 796
Query: 657 QTGVPPPQASLHHLQP-------PGAPALLPPPHQGLGQPQLGPPLLHPPPA--QSWPAQ 707
+P P AS P P +P PPP P L PLL PP+ S Q
Sbjct: 797 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ---APPVLAAPLLQVPPSPPASPTLQ 853
Query: 708 LPPRAPLPGQMLLSGGPR-------GPVPQPGLQPS 736
P R P PG GPR GP P P PS
Sbjct: 854 APRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS 889
Score = 63.9 bits (154), Expect = 5e-10
Identities = 60/181 (33%), Positives = 69/181 (38%), Gaps = 29/181 (16%)
Query: 563 QAPPGLG-PILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGT------AQPPP 615
QAPP L P L Q PS L L P PQ + P P + A P P
Sbjct: 593 QAPPALASPPL--QGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSP 650
Query: 616 GAPQGPP----GAASGPPPPGPILRPQNPGANPQLRSLLLNPP---PPQTGVPPPQASLH 668
AP A PPP P+ P +P A+P + S PP PP PP
Sbjct: 651 QAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPV-SPSATPPSQAPPSLAAPP------ 703
Query: 669 HLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPV 728
LQ P +P PP P PP PPP + P Q+PP P M S P V
Sbjct: 704 -LQVPPSPPASPPM-----SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRV 757
Query: 729 P 729
P
Sbjct: 758 P 758
Score = 63.9 bits (154), Expect = 5e-10
Identities = 60/178 (33%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 563 QAPPGLG-PILEDQARP--SQNLLQLRPPQPQPQGTVGAS--GATGQPQPQGTAQPPPGA 617
QAPP L P L+ P S L L P PQ + A P P Q P
Sbjct: 620 QAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 679
Query: 618 PQGPPGAASGPPPPG--------PILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHH 669
P PP + S PP P+ P +P A+P + PPPQ PPP A+
Sbjct: 680 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSAT--PPPQA--PPPLAA-PP 734
Query: 670 LQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGP 727
LQ P +P PP P PPLL PP Q P+ P A LP L P+ P
Sbjct: 735 LQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPS---PPASLPMSPLAKPPPQAP 789
Score = 63.9 bits (154), Expect = 5e-10
Identities = 66/208 (31%), Positives = 75/208 (36%), Gaps = 49/208 (23%)
Query: 563 QAPPG--LGPILEDQARPSQ--------NLLQLR---PPQPQPQGT--------VGASGA 601
QAPP P L A PS +LLQ PP P Q V S
Sbjct: 631 QAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSAT 690
Query: 602 TGQPQPQGTAQPP----PGAPQGPPGAASGPPPPG--------PILRPQNPGANPQLRSL 649
P A PP P P PP + S PPP P+ P +P A+P +
Sbjct: 691 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750
Query: 650 LLNPP--PPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPP------PA 701
PP PP PP Q PP PA LP PQ P L PP P
Sbjct: 751 ATPPPRVPPLLAAPPLQV------PPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 702 QSWPAQLP--PRAPLPGQMLLSGGPRGP 727
S+P Q P P A LP L + P+ P
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAP 832
Score = 62.0 bits (149), Expect = 2e-09
Identities = 60/183 (32%), Positives = 70/183 (38%), Gaps = 22/183 (12%)
Query: 570 PILEDQARPSQNLLQLRP-PQPQPQGTVGASGATGQPQ-PQGTAQPP-PGAPQGPPGAAS 626
P LE P+ LQ P P P +S AT PQ P A PP G P P +
Sbjct: 556 PHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLA 615
Query: 627 GPPPPGP-------ILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQ-----PPG 674
PPP P + P +P A+P L L P PQ P ++H LQ PP
Sbjct: 616 TPPPQAPPXLALPPLQAPPSPPASPPLSPLAT--PSPQA---PNALAVHLLQAPFSPPPS 670
Query: 675 APALLP--PPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPG 732
P P PP P PP PP + P Q+PP P M S P P P
Sbjct: 671 PPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPL 730
Query: 733 LQP 735
P
Sbjct: 731 AAP 733
Score = 61.2 bits (147), Expect = 3e-09
Identities = 67/237 (28%), Positives = 93/237 (39%), Gaps = 50/237 (21%)
Query: 197 KAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGP----LQSKQPVPLPPAAP 252
+A PP PLQ P P P+ + P P L + P+ +PP+ P
Sbjct: 725 QAPPPLAAPPLQVPPSPPASP-----------PMSPSATPPPRVPPLLAAPPLQVPPSPP 773
Query: 253 SGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFS-PITPLQQ 311
+ + P PL PPQ P L+ + A + A+ +A P S P++PL
Sbjct: 774 A-----SLPMSPLAKPPPQ--APPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLAT 826
Query: 312 AAPGVGPPFSQAPAPQLPPGPPG-----APKPPP-------ASQPSLVSTVAPGSGLAPT 359
P PP AP Q+PP PP AP+ PP S P L +APG P+
Sbjct: 827 PPPQA-PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPS 885
Query: 360 AQPGA----PSMAG-----TVAP----GGVSGPSPAQLGAPALGGQQSVSNKLLAWS 403
P + P +AG T P G SGP +P + + + AWS
Sbjct: 886 RSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHP-AAWS 941
Score = 57.4 bits (137), Expect = 5e-08
Identities = 49/185 (26%), Positives = 71/185 (38%), Gaps = 10/185 (5%)
Query: 206 PLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPL 265
P Q P ++ P ++GL P A P Q+ + LPP + ++ P PL
Sbjct: 591 PPQAPPALASPP-----LQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPL 645
Query: 266 PPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPA 325
P Q P L+ + A + + +A P SP P PP AP
Sbjct: 646 --ATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPP 703
Query: 326 PQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPS-PAQL 384
Q+PP PP +P P++ P P P P +P + ++P P P L
Sbjct: 704 LQVPPSPPASPPMSPSATPP--PQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLL 761
Query: 385 GAPAL 389
AP L
Sbjct: 762 AAPPL 766
Score = 55.5 bits (132), Expect = 2e-07
Identities = 56/168 (33%), Positives = 63/168 (37%), Gaps = 38/168 (22%)
Query: 578 PSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPP----GAPQGPPGAASGP-PPPG 632
P + L PP Q T AS T + + PPP AP P + P P P
Sbjct: 511 PLETQSSLAPPSLQ---TPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPC 567
Query: 633 PILRPQNPGANPQLRSLLLNPPPPQT----GVPPPQASLHHLQPPGAPALLPPPHQGLGQ 688
P+ P +P L PPP+T PPPQA PAL PP QGL
Sbjct: 568 PLQAPPSP----------LTTPPPETPSSIATPPPQAP---------PALASPPLQGLPS 608
Query: 689 PQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPS 736
P L PL PPP Q PP LP P P P PS
Sbjct: 609 PPLS-PLATPPP------QAPPXLALPPLQAPPSPPASPPLSPLATPS 649
Score = 53.1 bits (126), Expect = 9e-07
Identities = 70/276 (25%), Positives = 93/276 (33%), Gaps = 53/276 (19%)
Query: 145 ICNSPPYLLPAVESTTYSGCTTENLVQQIGERGIHFSIVSPRKLPALRLLFEKAAP-PAL 203
I PP PA+ S G + L + P+ P L L +A P P
Sbjct: 587 IATPPPQAPPALASPPLQGLPSPPLSP--------LATPPPQAPPXLALPPLQAPPSPPA 638
Query: 204 LEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAP-- 261
PL P S + + V L P +P P PP +PS S AP
Sbjct: 639 SPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPS 698
Query: 262 -----------------QQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFS 304
P PPQ P + A Q P
Sbjct: 699 LAAPPLQVPPSPPASPPMSPSATPPPQAPPP-------------LAAPPLQVPPSPPASP 745
Query: 305 PITPLQQAAPGVGPPFSQAPAPQLPPGPPGA------PKPPPASQPSLVSTVAPGSGLAP 358
P++P P V PP AP Q+PP PP + KPPP + P+L + P
Sbjct: 746 PMSPSATPPPRV-PPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPP 804
Query: 359 TAQPG----APSMAGTVAPGGVSGP-SPAQLGAPAL 389
+ PG +PS + ++P P +P L AP L
Sbjct: 805 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLL 840
Score = 52.8 bits (125), Expect = 1e-06
Identities = 53/152 (34%), Positives = 60/152 (39%), Gaps = 31/152 (20%)
Query: 576 ARPSQ----NLLQLRPPQPQPQGTVGA-------SGATGQPQPQGTAQ---PPPGAPQGP 621
A PSQ L LRPPQ P A S P P GT PPP P
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATP 326
Query: 622 PGAASGPPPP--GPI-LRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPAL 678
A P PP P+ L P +P A P L++L P PP T PP QA P++
Sbjct: 327 LPATLPPSPPLATPLPLAPPSPSAPPSLQTL---PSPPAT--PPSQA---------PPSM 372
Query: 679 LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPP 710
PP Q Q PP+ P S Q PP
Sbjct: 373 TTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPP 404
Score = 48.5 bits (114), Expect = 2e-05
Identities = 42/133 (31%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 590 PQPQGTVGASGATGQPQPQG--TAQPPPGAPQ--------GPPGAA--SGPPPPGPILRP 637
P +GT A QP+P+G +PP P GP ++ + P P G RP
Sbjct: 257 PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP 316
Query: 638 QNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLH 697
P N PP P P P L PP A PP Q L P PP
Sbjct: 317 VPPPDNAATPLPATLPPSPPLATPLP------LAPPSPSA--PPSLQTLPSPPATPPSQA 368
Query: 698 PPPAQSWPAQLPP 710
PP + P Q PP
Sbjct: 369 PPSMTTPPMQAPP 381
Score = 47.8 bits (112), Expect = 4e-05
Identities = 50/157 (31%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 235 APGPLQSKQ-PVPLP----PAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAV 289
AP PLQ+ P+ P P P+ L A P PL PP+ P +++ A A+
Sbjct: 542 APPPLQTASAPLTTPHLETPPCPAPCPLQAPPS-PLTTPPPE--TPSSIATPPPQAPPAL 598
Query: 290 EAAKNQKAGL-GPRFSPI-TPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLV 347
+ Q GL P SP+ TP QA PP P Q PP PP +P P + PS
Sbjct: 599 ASPPLQ--GLPSPPLSPLATPPPQA-----PPXLALPPLQAPPSPPASPPLSPLATPSPQ 651
Query: 348 STVAPGSGL--APTAQPGAPSMAGTVAPGGVSGPSPA 382
+ A L AP + P +P + +P SP+
Sbjct: 652 APNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS 688
Score = 45.8 bits (107), Expect = 1e-04
Identities = 48/172 (27%), Positives = 61/172 (35%), Gaps = 38/172 (22%)
Query: 586 RPPQPQPQGTVGASG--ATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGAN 643
RPP P+ +V ++ +T +P P +P G P + S P+ P G
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG-- 256
Query: 644 PQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPP---PHQGLGQPQLGP----PLL 696
P G P A +P G AL PP P + P LGP PL
Sbjct: 257 -----------PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 305
Query: 697 HPPP--------------AQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQ 734
P P A PA LPP PL + L+ P P P LQ
Sbjct: 306 TPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLA--PPSPSAPPSLQ 355
Score = 43.5 bits (101), Expect = 7e-04
Identities = 41/130 (31%), Positives = 49/130 (37%), Gaps = 21/130 (16%)
Query: 592 PQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLL 651
P + SG + + P+ A P P+G A PP P + P P S L
Sbjct: 248 PLSSPARSGPSARGTPRAPAHPSQPKPKGLQ--ALRPPQVTPPRKDAAPALGPLSSSPLA 305
Query: 652 NPPPPQTG---VPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQL 708
P P T VPPP + L PA LPP P L PL PP+ S P L
Sbjct: 306 TPSPSGTKARPVPPPDNAATPL-----PATLPP------SPPLATPLPLAPPSPSAPPSL 354
Query: 709 -----PPRAP 713
PP P
Sbjct: 355 QTLPSPPATP 364
Score = 43.1 bits (100), Expect = 0.001
Identities = 49/164 (29%), Positives = 62/164 (37%), Gaps = 33/164 (20%)
Query: 229 PVGGGSAPGPLQ---SKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAA 285
P GG P S PL A SG + P+ P P P+ P L A +
Sbjct: 228 PSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPK---PKGLQALRP-- 282
Query: 286 QNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP--ASQ 343
P+ +P P + AAP +GP S A P G P PPP A+
Sbjct: 283 ---------------PQVTP--PRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAAT 325
Query: 344 PSLVSTVAPGSGLA---PTA--QPGAPSMAGTVAPGGVSGPSPA 382
P L +T+ P LA P A P AP T+ + PS A
Sbjct: 326 P-LPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQA 368
Score = 42.0 bits (97), Expect = 0.002
Identities = 62/263 (23%), Positives = 93/263 (35%), Gaps = 33/263 (12%)
Query: 150 PYLLPAVESTTYSGCTTENLVQQIGERGIHFSIVSPRKLPA-LRLLFEKAAPPALLEPLQ 208
P L ++++TT G T F +SPR+ A L A+ P PLQ
Sbjct: 406 PLALSSLQATTSLGSPTLQATHS-------FLTMSPRQTQASLTSPSRPASTPPDSPPLQ 458
Query: 209 PPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPL-PPAAPSGATLSAAPQQPLPP 267
P + P + V P+ PLQ+ + P AP + + +
Sbjct: 459 APLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSL 518
Query: 268 VPPQYQVP-GNLSAAQVAAQNAVEAAKNQKAGLG---------------PRFSPITPLQQ 311
PP Q P +L+ + ++ Q A P +P +PL
Sbjct: 519 APPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTT 578
Query: 312 AAPGVGPPFSQAPAPQLPPG---PP--GAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPS 366
P P P PQ PP PP G P PP + + P L P P +P
Sbjct: 579 PPPET-PSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPP 637
Query: 367 MAGTVAPGGVSGPSPAQLGAPAL 389
+ ++P ++ PSP A A+
Sbjct: 638 ASPPLSP--LATPSPQAPNALAV 658
Score = 41.2 bits (95), Expect = 0.004
Identities = 52/193 (26%), Positives = 63/193 (32%), Gaps = 34/193 (17%)
Query: 564 APPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQ-PQGTAQPPPGAPQGPP 622
A P L L P + L + P Q +S A+ PQ P + PP Q
Sbjct: 465 ASPPLQTSLSPAVSPLSSPLTIHPLQAL------SSLASHSPQAPLSSLIMPPLETQSSL 518
Query: 623 GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLH----------HLQP 672
S PP + P L +L PPP P + H LQ
Sbjct: 519 APPSLQTPPASL-------TTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQA 571
Query: 673 PGAPALLPPPHQGLG---QPQLGPPLLHPPPAQSWP-------AQLPPRAPLPGQMLLSG 722
P +P PPP P PP L PP Q P A PP+AP +
Sbjct: 572 PPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQ 631
Query: 723 GPRGPVPQPGLQP 735
P P P L P
Sbjct: 632 APPSPPASPPLSP 644
Score = 37.7 bits (86), Expect = 0.039
Identities = 55/196 (28%), Positives = 73/196 (37%), Gaps = 46/196 (23%)
Query: 578 PSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAP--------QGPPGAASGPP 629
P L L PP P ++ Q P A PP AP Q PP + PP
Sbjct: 336 PLATPLPLAPPSPSAPPSL-------QTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPP 388
Query: 630 --------------PPGPI----LRPQNPGANPQLRS----LLLNPPPPQTGVPPPQ--A 665
PP P+ L+ +P L++ L ++P Q + P A
Sbjct: 389 IQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPA 448
Query: 666 SLHHLQPP-GAPALLP--PPHQGLGQPQLGP---PL-LHPPPAQSWPAQLPPRAPLPGQM 718
S PP AP LP PP Q P + P PL +HP A S A P+APL +
Sbjct: 449 STPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLI 508
Query: 719 LLSGGPRGPVPQPGLQ 734
+ + + P LQ
Sbjct: 509 MPPLETQSSLAPPSLQ 524
Score = 36.2 bits (82), Expect = 0.11
Identities = 54/220 (24%), Positives = 79/220 (35%), Gaps = 37/220 (16%)
Query: 179 HFSIVSPRKLPALR----LLFEKAAPPAL----LEPLQPPTDVSQDPRHMVLVRGLVLPV 230
H S P+ L ALR K A PAL PL P+ R + P+
Sbjct: 268 HPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPL 327
Query: 231 GGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVE 290
P P + PLP A PS + + P PP P Q P +++ + A +++
Sbjct: 328 PATLPPSPPLA---TPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQ 384
Query: 291 A---AKNQKAGLGPRF-SPITPLQ----QAAPGVGPPFSQAPAPQLPPGP---------P 333
+ + P +P +PL QA +G P QA L P P
Sbjct: 385 TIPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSP 444
Query: 334 GAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAP 373
P P P L AP + P +P + +++P
Sbjct: 445 SRPASTPPDSPPL---------QAPLSLPASPPLQTSLSP 475
Score = 35.0 bits (79), Expect = 0.25
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 311 QAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTV--APGSGLAPTAQ------- 361
+A P ++AP L P PPG+P+PPP P+ + + A G P A+
Sbjct: 9 KAGAAARTPAARAPG-LLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG 67
Query: 362 ---PGAPSMAGTVAPGGVSGPSPA 382
P + AG G S +PA
Sbjct: 68 ATIPESAPRAGPTRSAGTSSRNPA 91
Score = 34.7 bits (78), Expect = 0.33
Identities = 60/218 (27%), Positives = 73/218 (33%), Gaps = 52/218 (23%)
Query: 563 QAPPGLG-PILE-DQARPSQNLLQL--RPPQPQPQGTVGASGAT-----GQPQPQG---- 609
QAPP L P+L+ + P+ LQ RPP P P +V T G P P
Sbjct: 830 QAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS 889
Query: 610 -----------------TAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLN 652
T + G GP G A+ PPP L +P A +
Sbjct: 890 STLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSR------G 943
Query: 653 PPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLG--QPQLGPPLLHPPPAQSWPAQLP- 709
P PP P A L P PA P GL GP P P P P
Sbjct: 944 PAPPLAFRGAPGAPL-----PWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG 998
Query: 710 ----PRAPLPGQMLLSGGPR----GPVPQPGLQPSVME 739
A G S P+ G +P LQ SV++
Sbjct: 999 TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 1036
Score = 33.9 bits (76), Expect = 0.57
Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 25/173 (14%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQ-- 286
P G + S+ P PPA+ G A PV + G + +
Sbjct: 75 PRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 287 --NAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGP-PGAPKPPPASQ 343
+A E KA P+ S ++ A A + GP PG P P A +
Sbjct: 135 RISAEETVARGKATEAPKRSALS---------------AGARRDTSGPTPGTPSPAMARR 179
Query: 344 PSLVSTVAPGSGLAPTAQPGAPS-----MAGTVAPGGVSGPSPAQLGAPALGG 391
T AP+A+P P+ + + + PSPA P+ GG
Sbjct: 180 SRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG 232
Score = 30.0 bits (66), Expect = 8.2
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 22/113 (19%)
Query: 569 GPILEDQARPSQNLLQLRPP---QPQPQGT------VGASGATGQ-PQPQ-----GTAQP 613
G A + LL RPP +P P T +GA+GA G+ P + G A
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 614 PPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQAS 666
P AP+ P ++G P RP G + PP + P P +S
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGER-------APPAKNTSPGPVSS 116
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 70.5 bits (171), Expect = 5e-12
Identities = 66/182 (36%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 573 EDQARPSQNLLQLRPPQPQ-PQGTVGA--SGATGQPQ-------PQGTAQPPPGAP---Q 619
+ + Q +LQ +PP Q P G A S G PQ P TA PP G+P Q
Sbjct: 170 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 229
Query: 620 GP--PGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPA 677
P P A + P P I Q P +PQ R +PPP + PP Q P AP+
Sbjct: 230 APNQPQAPTAPVPHTHI--QQAPALHPQ-RPPSPHPPPHPSPHPPLQPLTGSAGQPSAPS 286
Query: 678 LLPPPHQGLGQP-----QLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPG 732
PP G G P Q GP L HP P Q P LPP+A GQ L P P
Sbjct: 287 HAQPPLHGQGPPGPHSLQAGPLLQHPGPPQ--PFGLPPQAS-QGQAPLGTSPAAAYPHTS 343
Query: 733 LQ 734
LQ
Sbjct: 344 LQ 345
Score = 56.2 bits (134), Expect = 1e-07
Identities = 55/177 (31%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 570 PILEDQARPSQNLLQLRPPQPQPQGTVGA-SGATGQPQPQGTAQPPPGAPQGPPGAAS-- 626
P L Q PS + PP P P + +G+ GQP AQPP QGPPG S
Sbjct: 250 PALHPQRPPSPH----PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG-QGPPGPHSLQ 304
Query: 627 --------GPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPAL 678
GPP P + + G P S P +P Q++L QPP L
Sbjct: 305 AGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL 364
Query: 679 LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
P P L P + PP P P P L G S P P P L+P
Sbjct: 365 PPAP---LAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLP-PPPALKP 417
Score = 55.8 bits (133), Expect = 1e-07
Identities = 54/185 (29%), Positives = 72/185 (38%), Gaps = 29/185 (15%)
Query: 200 PPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSA 259
PP P P + P H+ S P P +P PPA ++LS
Sbjct: 377 PPTTPIPQLPAPQAHKHPPHL-------------SGPSPFSMNANLPPPPALKPLSSLST 423
Query: 260 APQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP 319
P PP Q+ + ++Q P P T L Q AP PP
Sbjct: 424 --HHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ--PP 479
Query: 320 FSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQP---GAPSMAGTVAPGGV 376
F+Q P +P GPP P + P+ ST P +G +AQP GA + G++A GG
Sbjct: 480 FAQHPF--VPGGPP------PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIA-GGS 530
Query: 377 SGPSP 381
S P P
Sbjct: 531 SCPLP 535
Score = 49.7 bits (117), Expect = 1e-05
Identities = 74/268 (27%), Positives = 88/268 (32%), Gaps = 70/268 (26%)
Query: 185 PRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQP 244
P P L+ L A P+ QPP P L G +L PGP QP
Sbjct: 266 PSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL-----QHPGP---PQP 317
Query: 245 VPLPPAAPSG-ATLSAAP-------------------------QQPLPPVP---PQYQVP 275
LPP A G A L +P +QPLPP P P + P
Sbjct: 318 FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP 377
Query: 276 GNLSAAQVAAQNAVE----------AAKNQKAGLGPRFSPITPLQ-QAAPGVGPPFSQ-- 322
Q+ A A + + N P P++ L P PP Q
Sbjct: 378 PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM 437
Query: 323 ---APAPQLPPGPPGAPK-----PPPASQPSL-VSTVAP----------GSGLAPTAQPG 363
P P P PPG + PPPAS P + VAP G P P
Sbjct: 438 PQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPT 497
Query: 364 APSMAGTVAPGGVSGPSPAQLGAPALGG 391
PS + A G S P GA A GG
Sbjct: 498 CPSTSTPPAGPGTSAQPPCS-GAAASGG 524
Score = 45.8 bits (107), Expect = 1e-04
Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 19/140 (13%)
Query: 248 PPAAPSGATLSAAPQQPLPPVPPQYQVPGNL-SAAQVAAQNAVEAAKNQKAGLGPRFSPI 306
PPA + ++ AP PP PQ PG SA V Q + A++ +P
Sbjct: 184 PPALQAPTGVTPAPSSA-PPGTPQLPTPGPTPSATAVPPQGSPTASQ----------APN 232
Query: 307 TPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPS 366
P AP QAPA L P P +P PPP PS + P +G A QP APS
Sbjct: 233 QPQAPTAPVPHTHIQQAPA--LHPQRPPSPHPPP--HPSPHPPLQPLTGSA--GQPSAPS 286
Query: 367 MAGTVAPG-GVSGPSPAQLG 385
A G G GP Q G
Sbjct: 287 HAQPPLHGQGPPGPHSLQAG 306
Score = 44.3 bits (103), Expect = 4e-04
Identities = 56/228 (24%), Positives = 75/228 (32%), Gaps = 59/228 (25%)
Query: 563 QAPPGLGPILED-----QARPSQNLLQLRPP---QPQPQGTVGASGATGQPQPQGTAQPP 614
QAP G P Q SQ+ LQ + P QP P + P P
Sbjct: 328 QAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPA 387
Query: 615 PGAPQGPPGAASGPP-------PPGPILRPQN-------PGANPQLRSLL---------- 650
P A + PP + P PP P L+P + P A+P L+
Sbjct: 388 PQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSP 447
Query: 651 -----------LNPPP---PQTGV----PPPQASLHHLQPPGAPALLPPPHQGLGQPQLG 692
L PPP P TG+ P P + H P G P + PP P G
Sbjct: 448 AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAG 507
Query: 693 PPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMED 740
P PP A ++GG P+P ++ ++D
Sbjct: 508 PGTSAQPPCSGAAA---------SGGSIAGGSSCPLPTVQIKEEALDD 546
Score = 41.2 bits (95), Expect = 0.004
Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 31/163 (19%)
Query: 200 PPALLEPLQ------PPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPS 253
PP L+PL PP+ + P ++ + LP PG QS+ P P + P
Sbjct: 411 PPPALKPLSSLSTHHPPS--AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPP 468
Query: 254 GATLSAAPQQPL--------------PPVPPQYQVP--GNLSAAQVAAQNAVEAAKNQKA 297
APQ P PP P P G ++AQ A A+ A
Sbjct: 469 TGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAA-ASGGSIA 527
Query: 298 GLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP 340
G P +++ A A P+ PP PP +P P P
Sbjct: 528 GGSSCPLPTVQIKEEA------LDDAEEPESPPPPPRSPSPEP 564
Score = 40.8 bits (94), Expect = 0.005
Identities = 64/243 (26%), Positives = 82/243 (33%), Gaps = 44/243 (18%)
Query: 197 KAAPPALLEPL-------QPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPP 249
+A PPAL P P Q P +P G ++ P P
Sbjct: 181 QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 240
Query: 250 AAPSGATLSAA--PQQPLPPVPPQYQVPG------NLSAAQVAAQNAVEAAKNQKAGLGP 301
+ + A PQ+P P PP + P SA Q +A + + + + GP
Sbjct: 241 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP 300
Query: 302 RFSPITPLQQAAPGVGPPFS---QAPAPQLPPGPPGAPKPP------PASQPSLVSTVAP 352
PL Q PG PF QA Q P G A P PASQ +L S P
Sbjct: 301 HSLQAGPLLQ-HPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 359
Query: 353 GSGLAPTAQ--------------PGAPSMAGTVAPGGVSGPSPAQLGA-----PALGGQQ 393
P A P P+ P +SGPSP + A PAL
Sbjct: 360 REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 419
Query: 394 SVS 396
S+S
Sbjct: 420 SLS 422
Score = 37.7 bits (86), Expect = 0.039
Identities = 39/144 (27%), Positives = 49/144 (34%), Gaps = 18/144 (12%)
Query: 550 QKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQP---- 605
Q + Q Q PPGL SQNL PP P G QP
Sbjct: 435 QLMPQSQPLPSSPAQPPGL--------TQSQNL----PPPPASHPPTGLHQVAPQPPFAQ 482
Query: 606 QPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQA 665
P PPP P P ++ P PG +P GA S+ P V +
Sbjct: 483 HPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE 542
Query: 666 SLHHLQPPGAPALLPPPHQGLGQP 689
+L + P +P PPP +P
Sbjct: 543 ALDDAEEPESPP--PPPRSPSPEP 564
Score = 32.7 bits (73), Expect = 1.3
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 583 LQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRP---QN 639
L L P QG+ G P G P A P PPG + P Q
Sbjct: 882 LHLHQQDPLHQGSAGPVHPLVDPLTAG------------PHLARFPYPPGTLPNPLLGQP 929
Query: 640 PGANPQLRSLLLNPPPPQT---GVPPPQASLHHLQ 671
P + LR + P P+ +PPP ++ H LQ
Sbjct: 930 PHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQ 964
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 70.5 bits (171), Expect = 5e-12
Identities = 66/182 (36%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 573 EDQARPSQNLLQLRPPQPQ-PQGTVGA--SGATGQPQ-------PQGTAQPPPGAP---Q 619
+ + Q +LQ +PP Q P G A S G PQ P TA PP G+P Q
Sbjct: 724 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 783
Query: 620 GP--PGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPA 677
P P A + P P I Q P +PQ R +PPP + PP Q P AP+
Sbjct: 784 APNQPQAPTAPVPHTHI--QQAPALHPQ-RPPSPHPPPHPSPHPPLQPLTGSAGQPSAPS 840
Query: 678 LLPPPHQGLGQP-----QLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPG 732
PP G G P Q GP L HP P Q P LPP+A GQ L P P
Sbjct: 841 HAQPPLHGQGPPGPHSLQAGPLLQHPGPPQ--PFGLPPQAS-QGQAPLGTSPAAAYPHTS 897
Query: 733 LQ 734
LQ
Sbjct: 898 LQ 899
Score = 56.2 bits (134), Expect = 1e-07
Identities = 55/177 (31%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 570 PILEDQARPSQNLLQLRPPQPQPQGTVGA-SGATGQPQPQGTAQPPPGAPQGPPGAAS-- 626
P L Q PS + PP P P + +G+ GQP AQPP QGPPG S
Sbjct: 804 PALHPQRPPSPH----PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG-QGPPGPHSLQ 858
Query: 627 --------GPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPAL 678
GPP P + + G P S P +P Q++L QPP L
Sbjct: 859 AGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL 918
Query: 679 LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
P P L P + PP P P P L G S P P P L+P
Sbjct: 919 PPAP---LAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLP-PPPALKP 971
Score = 55.8 bits (133), Expect = 1e-07
Identities = 54/185 (29%), Positives = 72/185 (38%), Gaps = 29/185 (15%)
Query: 200 PPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSA 259
PP P P + P H+ S P P +P PPA ++LS
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHL-------------SGPSPFSMNANLPPPPALKPLSSLST 977
Query: 260 APQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP 319
P PP Q+ + ++Q P P T L Q AP PP
Sbjct: 978 --HHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ--PP 1033
Query: 320 FSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQP---GAPSMAGTVAPGGV 376
F+Q P +P GPP P + P+ ST P +G +AQP GA + G++A GG
Sbjct: 1034 FAQHPF--VPGGPP------PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIA-GGS 1084
Query: 377 SGPSP 381
S P P
Sbjct: 1085 SCPLP 1089
Score = 49.7 bits (117), Expect = 1e-05
Identities = 74/268 (27%), Positives = 88/268 (32%), Gaps = 70/268 (26%)
Query: 185 PRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQP 244
P P L+ L A P+ QPP P L G +L PGP QP
Sbjct: 820 PSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL-----QHPGP---PQP 871
Query: 245 VPLPPAAPSG-ATLSAAP-------------------------QQPLPPVP---PQYQVP 275
LPP A G A L +P +QPLPP P P + P
Sbjct: 872 FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP 931
Query: 276 GNLSAAQVAAQNAVE----------AAKNQKAGLGPRFSPITPLQ-QAAPGVGPPFSQ-- 322
Q+ A A + + N P P++ L P PP Q
Sbjct: 932 PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM 991
Query: 323 ---APAPQLPPGPPGAPK-----PPPASQPSL-VSTVAP----------GSGLAPTAQPG 363
P P P PPG + PPPAS P + VAP G P P
Sbjct: 992 PQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPT 1051
Query: 364 APSMAGTVAPGGVSGPSPAQLGAPALGG 391
PS + A G S P GA A GG
Sbjct: 1052 CPSTSTPPAGPGTSAQPPCS-GAAASGG 1078
Score = 45.8 bits (107), Expect = 1e-04
Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 19/140 (13%)
Query: 248 PPAAPSGATLSAAPQQPLPPVPPQYQVPGNL-SAAQVAAQNAVEAAKNQKAGLGPRFSPI 306
PPA + ++ AP PP PQ PG SA V Q + A++ +P
Sbjct: 738 PPALQAPTGVTPAPSSA-PPGTPQLPTPGPTPSATAVPPQGSPTASQ----------APN 786
Query: 307 TPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPS 366
P AP QAPA L P P +P PPP PS + P +G A QP APS
Sbjct: 787 QPQAPTAPVPHTHIQQAPA--LHPQRPPSPHPPP--HPSPHPPLQPLTGSA--GQPSAPS 840
Query: 367 MAGTVAPG-GVSGPSPAQLG 385
A G G GP Q G
Sbjct: 841 HAQPPLHGQGPPGPHSLQAG 860
Score = 44.3 bits (103), Expect = 4e-04
Identities = 56/228 (24%), Positives = 75/228 (32%), Gaps = 59/228 (25%)
Query: 563 QAPPGLGPILED-----QARPSQNLLQLRPP---QPQPQGTVGASGATGQPQPQGTAQPP 614
QAP G P Q SQ+ LQ + P QP P + P P
Sbjct: 882 QAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPA 941
Query: 615 PGAPQGPPGAASGPP-------PPGPILRPQN-------PGANPQLRSLL---------- 650
P A + PP + P PP P L+P + P A+P L+
Sbjct: 942 PQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSP 1001
Query: 651 -----------LNPPP---PQTGV----PPPQASLHHLQPPGAPALLPPPHQGLGQPQLG 692
L PPP P TG+ P P + H P G P + PP P G
Sbjct: 1002 AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAG 1061
Query: 693 PPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMED 740
P PP A ++GG P+P ++ ++D
Sbjct: 1062 PGTSAQPPCSGAAA---------SGGSIAGGSSCPLPTVQIKEEALDD 1100
Score = 41.2 bits (95), Expect = 0.004
Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 31/163 (19%)
Query: 200 PPALLEPLQ------PPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPS 253
PP L+PL PP+ + P ++ + LP PG QS+ P P + P
Sbjct: 965 PPPALKPLSSLSTHHPPS--AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPP 1022
Query: 254 GATLSAAPQQPL--------------PPVPPQYQVP--GNLSAAQVAAQNAVEAAKNQKA 297
APQ P PP P P G ++AQ A A+ A
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAA-ASGGSIA 1081
Query: 298 GLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP 340
G P +++ A A P+ PP PP +P P P
Sbjct: 1082 GGSSCPLPTVQIKEEA------LDDAEEPESPPPPPRSPSPEP 1118
Score = 40.8 bits (94), Expect = 0.005
Identities = 64/243 (26%), Positives = 82/243 (33%), Gaps = 44/243 (18%)
Query: 197 KAAPPALLEPL-------QPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPP 249
+A PPAL P P Q P +P G ++ P P
Sbjct: 735 QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794
Query: 250 AAPSGATLSAA--PQQPLPPVPPQYQVPG------NLSAAQVAAQNAVEAAKNQKAGLGP 301
+ + A PQ+P P PP + P SA Q +A + + + + GP
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP 854
Query: 302 RFSPITPLQQAAPGVGPPFS---QAPAPQLPPGPPGAPKPP------PASQPSLVSTVAP 352
PL Q PG PF QA Q P G A P PASQ +L S P
Sbjct: 855 HSLQAGPLLQ-HPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 913
Query: 353 GSGLAPTAQ--------------PGAPSMAGTVAPGGVSGPSPAQLGA-----PALGGQQ 393
P A P P+ P +SGPSP + A PAL
Sbjct: 914 REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 973
Query: 394 SVS 396
S+S
Sbjct: 974 SLS 976
Score = 37.7 bits (86), Expect = 0.039
Identities = 39/144 (27%), Positives = 49/144 (34%), Gaps = 18/144 (12%)
Query: 550 QKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQP---- 605
Q + Q Q PPGL SQNL PP P G QP
Sbjct: 989 QLMPQSQPLPSSPAQPPGL--------TQSQNL----PPPPASHPPTGLHQVAPQPPFAQ 1036
Query: 606 QPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQA 665
P PPP P P ++ P PG +P GA S+ P V +
Sbjct: 1037 HPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE 1096
Query: 666 SLHHLQPPGAPALLPPPHQGLGQP 689
+L + P +P PPP +P
Sbjct: 1097 ALDDAEEPESPP--PPPRSPSPEP 1118
Score = 32.7 bits (73), Expect = 1.3
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 583 LQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRP---QN 639
L L P QG+ G P G P A P PPG + P Q
Sbjct: 1436 LHLHQQDPLHQGSAGPVHPLVDPLTAG------------PHLARFPYPPGTLPNPLLGQP 1483
Query: 640 PGANPQLRSLLLNPPPPQT---GVPPPQASLHHLQ 671
P + LR + P P+ +PPP ++ H LQ
Sbjct: 1484 PHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQ 1518
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 70.5 bits (171), Expect = 5e-12
Identities = 66/182 (36%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 573 EDQARPSQNLLQLRPPQPQ-PQGTVGA--SGATGQPQ-------PQGTAQPPPGAP---Q 619
+ + Q +LQ +PP Q P G A S G PQ P TA PP G+P Q
Sbjct: 724 DSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQ 783
Query: 620 GP--PGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPA 677
P P A + P P I Q P +PQ R +PPP + PP Q P AP+
Sbjct: 784 APNQPQAPTAPVPHTHI--QQAPALHPQ-RPPSPHPPPHPSPHPPLQPLTGSAGQPSAPS 840
Query: 678 LLPPPHQGLGQP-----QLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPG 732
PP G G P Q GP L HP P Q P LPP+A GQ L P P
Sbjct: 841 HAQPPLHGQGPPGPHSLQAGPLLQHPGPPQ--PFGLPPQAS-QGQAPLGTSPAAAYPHTS 897
Query: 733 LQ 734
LQ
Sbjct: 898 LQ 899
Score = 56.2 bits (134), Expect = 1e-07
Identities = 55/177 (31%), Positives = 66/177 (37%), Gaps = 20/177 (11%)
Query: 570 PILEDQARPSQNLLQLRPPQPQPQGTVGA-SGATGQPQPQGTAQPPPGAPQGPPGAAS-- 626
P L Q PS + PP P P + +G+ GQP AQPP QGPPG S
Sbjct: 804 PALHPQRPPSPH----PPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHG-QGPPGPHSLQ 858
Query: 627 --------GPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPAL 678
GPP P + + G P S P +P Q++L QPP L
Sbjct: 859 AGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPL 918
Query: 679 LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
P P L P + PP P P P L G S P P P L+P
Sbjct: 919 PPAP---LAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLP-PPPALKP 971
Score = 55.8 bits (133), Expect = 1e-07
Identities = 54/185 (29%), Positives = 72/185 (38%), Gaps = 29/185 (15%)
Query: 200 PPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSA 259
PP P P + P H+ S P P +P PPA ++LS
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHL-------------SGPSPFSMNANLPPPPALKPLSSLST 977
Query: 260 APQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP 319
P PP Q+ + ++Q P P T L Q AP PP
Sbjct: 978 --HHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQ--PP 1033
Query: 320 FSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQP---GAPSMAGTVAPGGV 376
F+Q P +P GPP P + P+ ST P +G +AQP GA + G++A GG
Sbjct: 1034 FAQHPF--VPGGPP------PITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIA-GGS 1084
Query: 377 SGPSP 381
S P P
Sbjct: 1085 SCPLP 1089
Score = 49.7 bits (117), Expect = 1e-05
Identities = 74/268 (27%), Positives = 88/268 (32%), Gaps = 70/268 (26%)
Query: 185 PRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQP 244
P P L+ L A P+ QPP P L G +L PGP QP
Sbjct: 820 PSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLL-----QHPGP---PQP 871
Query: 245 VPLPPAAPSG-ATLSAAP-------------------------QQPLPPVP---PQYQVP 275
LPP A G A L +P +QPLPP P P + P
Sbjct: 872 FGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPP 931
Query: 276 GNLSAAQVAAQNAVE----------AAKNQKAGLGPRFSPITPLQ-QAAPGVGPPFSQ-- 322
Q+ A A + + N P P++ L P PP Q
Sbjct: 932 PTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLM 991
Query: 323 ---APAPQLPPGPPGAPK-----PPPASQPSL-VSTVAP----------GSGLAPTAQPG 363
P P P PPG + PPPAS P + VAP G P P
Sbjct: 992 PQSQPLPSSPAQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPT 1051
Query: 364 APSMAGTVAPGGVSGPSPAQLGAPALGG 391
PS + A G S P GA A GG
Sbjct: 1052 CPSTSTPPAGPGTSAQPPCS-GAAASGG 1078
Score = 45.8 bits (107), Expect = 1e-04
Identities = 48/140 (34%), Positives = 58/140 (41%), Gaps = 19/140 (13%)
Query: 248 PPAAPSGATLSAAPQQPLPPVPPQYQVPGNL-SAAQVAAQNAVEAAKNQKAGLGPRFSPI 306
PPA + ++ AP PP PQ PG SA V Q + A++ +P
Sbjct: 738 PPALQAPTGVTPAPSSA-PPGTPQLPTPGPTPSATAVPPQGSPTASQ----------APN 786
Query: 307 TPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPS 366
P AP QAPA L P P +P PPP PS + P +G A QP APS
Sbjct: 787 QPQAPTAPVPHTHIQQAPA--LHPQRPPSPHPPP--HPSPHPPLQPLTGSA--GQPSAPS 840
Query: 367 MAGTVAPG-GVSGPSPAQLG 385
A G G GP Q G
Sbjct: 841 HAQPPLHGQGPPGPHSLQAG 860
Score = 44.3 bits (103), Expect = 4e-04
Identities = 56/228 (24%), Positives = 75/228 (32%), Gaps = 59/228 (25%)
Query: 563 QAPPGLGPILED-----QARPSQNLLQLRPP---QPQPQGTVGASGATGQPQPQGTAQPP 614
QAP G P Q SQ+ LQ + P QP P + P P
Sbjct: 882 QAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPA 941
Query: 615 PGAPQGPPGAASGPP-------PPGPILRPQN-------PGANPQLRSLL---------- 650
P A + PP + P PP P L+P + P A+P L+
Sbjct: 942 PQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSP 1001
Query: 651 -----------LNPPP---PQTGV----PPPQASLHHLQPPGAPALLPPPHQGLGQPQLG 692
L PPP P TG+ P P + H P G P + PP P G
Sbjct: 1002 AQPPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAG 1061
Query: 693 PPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMED 740
P PP A ++GG P+P ++ ++D
Sbjct: 1062 PGTSAQPPCSGAAA---------SGGSIAGGSSCPLPTVQIKEEALDD 1100
Score = 41.2 bits (95), Expect = 0.004
Identities = 43/163 (26%), Positives = 59/163 (36%), Gaps = 31/163 (19%)
Query: 200 PPALLEPLQ------PPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPS 253
PP L+PL PP+ + P ++ + LP PG QS+ P P + P
Sbjct: 965 PPPALKPLSSLSTHHPPS--AHPPPLQLMPQSQPLPSSPAQPPGLTQSQNLPPPPASHPP 1022
Query: 254 GATLSAAPQQPL--------------PPVPPQYQVP--GNLSAAQVAAQNAVEAAKNQKA 297
APQ P PP P P G ++AQ A A+ A
Sbjct: 1023 TGLHQVAPQPPFAQHPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAA-ASGGSIA 1081
Query: 298 GLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP 340
G P +++ A A P+ PP PP +P P P
Sbjct: 1082 GGSSCPLPTVQIKEEA------LDDAEEPESPPPPPRSPSPEP 1118
Score = 40.8 bits (94), Expect = 0.005
Identities = 64/243 (26%), Positives = 82/243 (33%), Gaps = 44/243 (18%)
Query: 197 KAAPPALLEPL-------QPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPP 249
+A PPAL P P Q P +P G ++ P P
Sbjct: 735 QAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAP 794
Query: 250 AAPSGATLSAA--PQQPLPPVPPQYQVPG------NLSAAQVAAQNAVEAAKNQKAGLGP 301
+ + A PQ+P P PP + P SA Q +A + + + + GP
Sbjct: 795 VPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAGQPSAPSHAQPPLHGQGPPGP 854
Query: 302 RFSPITPLQQAAPGVGPPFS---QAPAPQLPPGPPGAPKPP------PASQPSLVSTVAP 352
PL Q PG PF QA Q P G A P PASQ +L S P
Sbjct: 855 HSLQAGPLLQ-HPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPP 913
Query: 353 GSGLAPTAQ--------------PGAPSMAGTVAPGGVSGPSPAQLGA-----PALGGQQ 393
P A P P+ P +SGPSP + A PAL
Sbjct: 914 REQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLS 973
Query: 394 SVS 396
S+S
Sbjct: 974 SLS 976
Score = 37.7 bits (86), Expect = 0.039
Identities = 39/144 (27%), Positives = 49/144 (34%), Gaps = 18/144 (12%)
Query: 550 QKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQP---- 605
Q + Q Q PPGL SQNL PP P G QP
Sbjct: 989 QLMPQSQPLPSSPAQPPGL--------TQSQNL----PPPPASHPPTGLHQVAPQPPFAQ 1036
Query: 606 QPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQA 665
P PPP P P ++ P PG +P GA S+ P V +
Sbjct: 1037 HPFVPGGPPPITPPTCPSTSTPPAGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEE 1096
Query: 666 SLHHLQPPGAPALLPPPHQGLGQP 689
+L + P +P PPP +P
Sbjct: 1097 ALDDAEEPESPP--PPPRSPSPEP 1118
Score = 32.7 bits (73), Expect = 1.3
Identities = 27/95 (28%), Positives = 35/95 (36%), Gaps = 18/95 (18%)
Query: 583 LQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRP---QN 639
L L P QG+ G P G P A P PPG + P Q
Sbjct: 1436 LHLHQQDPLHQGSAGPVHPLVDPLTAG------------PHLARFPYPPGTLPNPLLGQP 1483
Query: 640 PGANPQLRSLLLNPPPPQT---GVPPPQASLHHLQ 671
P + LR + P P+ +PPP ++ H LQ
Sbjct: 1484 PHEHEMLRHPVFGTPYPRDLPGAIPPPMSAAHQLQ 1518
>gi|41349484 proline-rich protein BstNI subfamily 1 isoform 2
preproprotein [Homo sapiens]
Length = 198
Score = 70.5 bits (171), Expect = 5e-12
Identities = 70/186 (37%), Positives = 78/186 (41%), Gaps = 47/186 (25%)
Query: 579 SQNLLQLRPPQPQPQG---TVGASGATGQPQ---PQG----TAQPPPGAPQGPP------ 622
S +L+ P P PQG G G+PQ PQG PPPG PQGPP
Sbjct: 28 SPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKS 87
Query: 623 -------GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP----QASLHHLQ 671
G GPPP G +PQ P PQ + PPPP PP S
Sbjct: 88 RSPRSPPGKPQGPPPQGG--KPQGPP--PQGGNKPQGPPPPGKPQGPPAQGGSKSQSARS 143
Query: 672 PPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPV-PQ 730
PPG P PP Q PQ GP PPPA P Q P+AP GQ P+GP P
Sbjct: 144 PPGKPQ--GPPQQEGNNPQ-GP----PPPAGGNPQQ--PQAPPAGQ------PQGPPRPP 188
Query: 731 PGLQPS 736
G +PS
Sbjct: 189 QGGRPS 194
Score = 61.6 bits (148), Expect = 3e-09
Identities = 54/148 (36%), Positives = 58/148 (39%), Gaps = 29/148 (19%)
Query: 561 GQQAPPGLGPILEDQARPSQNLLQLRPPQP--QPQGTVGASGATGQPQPQG----TAQPP 614
G P G P + Q P Q P P +PQG G P PQG PP
Sbjct: 64 GGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPP 123
Query: 615 PGAPQGPPG-------AASGPP--PPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQA 665
PG PQGPP +A PP P GP PQ G NPQ PPP G P Q
Sbjct: 124 PGKPQGPPAQGGSKSQSARSPPGKPQGP---PQQEGNNPQ-------GPPPPAGGNPQQP 173
Query: 666 SLHHLQPPGAPALLPPPHQGLGQPQLGP 693
P G P P P QG G+P P
Sbjct: 174 ---QAPPAGQPQGPPRPPQG-GRPSRPP 197
Score = 50.1 bits (118), Expect = 8e-06
Identities = 50/169 (29%), Positives = 56/169 (33%), Gaps = 31/169 (18%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAA--PQQPLPPVPPQYQVPGNLSAAQVAAQ 286
P GG GP P PP P G PQ P PP PQ P
Sbjct: 41 PQGGNKPQGP-------PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPP----------- 82
Query: 287 NAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPA--SQP 344
++ P P P Q GPP PQ PP PPG P+ PPA
Sbjct: 83 ----QGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPP-PPGKPQGPPAQGGSK 137
Query: 345 SLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQ 393
S + PG P Q G P +G +P Q AP G Q
Sbjct: 138 SQSARSPPGKPQGPPQQEG----NNPQGPPPPAGGNPQQPQAPPAGQPQ 182
Score = 40.8 bits (94), Expect = 0.005
Identities = 30/83 (36%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 317 GPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQ---PGAPSMAGTVAP 373
GPP PQ PP P PPP S PG P Q P P G P
Sbjct: 59 GPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKP 118
Query: 374 GGVSGPSPAQLGAPALGGQQSVS 396
G P Q G PA GG +S S
Sbjct: 119 QGPPPPGKPQ-GPPAQGGSKSQS 140
Score = 39.3 bits (90), Expect = 0.013
Identities = 36/114 (31%), Positives = 41/114 (35%), Gaps = 21/114 (18%)
Query: 548 QQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQP-- 605
Q K + G Q PP G + N Q PP +PQG G+ Q
Sbjct: 83 QGDKSRSPRSPPGKPQGPPPQGGKPQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSAR 142
Query: 606 ----QPQGTAQ--------PPPGA------PQGPP-GAASGPPPPGPILRPQNP 640
+PQG Q PPP A PQ PP G GPP P RP P
Sbjct: 143 SPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 196
Score = 31.2 bits (69), Expect = 3.7
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 1/83 (1%)
Query: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAG 369
Q+ +P + Q P+PQ P G P PP Q G P +P P G
Sbjct: 25 QEESPSLIAGNPQGPSPQGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQG 84
Query: 370 TVAPGGVSGPSPAQLGAPALGGQ 392
+ S P Q G P GG+
Sbjct: 85 DKSRSPRSPPGKPQ-GPPPQGGK 106
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 70.1 bits (170), Expect = 7e-12
Identities = 63/204 (30%), Positives = 82/204 (40%), Gaps = 52/204 (25%)
Query: 564 APPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPG------- 616
APP L RP L+ PP+P P P+ PPPG
Sbjct: 219 APPSLPAGPPGVKRPPPPLMNGLPPRP--------------PLPESLPPPPPGGLPLPPM 264
Query: 617 -----APQGPPGAASGPP------PPGPILRPQNPGANPQLRSLLLNPP-----PPQTGV 660
AP GPPG PP PP P++ P G +P ++PP PP GV
Sbjct: 265 PPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPG--VHPPAPGVHPPAPGV 322
Query: 661 PPPQASLHHLQP---PGAPALLPP-PHQGLGQPQLGPPL--LHPPPAQSWPAQLPPRAPL 714
PP + +H P P AP + PP P P + PP +HPPP+ A + P+AP
Sbjct: 323 HPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPS----AGVHPQAPG 378
Query: 715 PGQMLLSGGPRGP---VPQPGLQP 735
+ P+ P P PG+ P
Sbjct: 379 VHPAAPAVHPQAPGVHPPAPGMHP 402
Score = 61.2 bits (147), Expect = 3e-09
Identities = 48/152 (31%), Positives = 59/152 (38%), Gaps = 27/152 (17%)
Query: 585 LRPPQP---QPQGTVGASGATGQPQPQGTAQPPPG----APQGPPGAASGPPPPGPILRP 637
+ PP P P V P G P PG AP P A PPP + P
Sbjct: 315 VHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPSAGVHP 374
Query: 638 QNPGANPQLRSLLLNPPPPQTGVPPPQASLH------HLQPPG----APALLPPP----- 682
Q PG +P ++ P GV PP +H H QPPG AP + P P
Sbjct: 375 QAPGVHPAAPAV----HPQAPGVHPPAPGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHP 430
Query: 683 -HQGLGQPQLGPPLLHPPPAQSWPAQLPPRAP 713
+ G+ P PP+L PP P +PP P
Sbjct: 431 SNPGVHPPTPMPPMLRPPLPSEGPGNIPPPPP 462
Score = 59.3 bits (142), Expect = 1e-08
Identities = 63/214 (29%), Positives = 75/214 (35%), Gaps = 37/214 (17%)
Query: 179 HFSIVSPRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGP 238
HF + P P+L A PP + P PP ++ P L L P GG
Sbjct: 211 HFKMEKPPAPPSL-----PAGPPGVKRP--PPPLMNGLPPRPPLPESLPPPPPGG----- 258
Query: 239 LQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG 298
+PLPP P+G S P P P P PG A V A G
Sbjct: 259 ------LPLPPMPPTGPAPSGPPGPPQLPPP----APGVHPPAPVVHPPA-SGVHPPAPG 307
Query: 299 LGPRFSPITPLQQAAPGVGPPFS--QAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGL 356
+ P P + APGV PP S PAP + P PG P P P P G+
Sbjct: 308 VHP---PAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGV 364
Query: 357 APTAQPGAPSMAGTVAPG---------GVSGPSP 381
P G A V P GV P+P
Sbjct: 365 HPPPSAGVHPQAPGVHPAAPAVHPQAPGVHPPAP 398
Score = 46.6 bits (109), Expect = 8e-05
Identities = 41/146 (28%), Positives = 52/146 (35%), Gaps = 29/146 (19%)
Query: 246 PLPPAAPSGATLSAAPQQPLPP-VPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFS 304
P PP+ P+G P PL +PP+ +P +L P
Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPP------------------PGGL 259
Query: 305 PITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGA 364
P+ P+ PP PAP PPGPP P P P P P SG+ P A
Sbjct: 260 PLPPM--------PP--TGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVH 309
Query: 365 PSMAGTVAPGGVSGPSPAQLGAPALG 390
P G P P + + PA G
Sbjct: 310 PPAPGVHPPAPGVHPPTSGVHPPAPG 335
Score = 43.9 bits (102), Expect = 5e-04
Identities = 37/110 (33%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 630 PPGPILRPQNPGANPQLRSLLLNPPPPQT-GVPPPQASLHHLQPPGAPALLPPPHQGLGQ 688
PP P P P P ++ PPPP G+PP +PP +L PPP GL
Sbjct: 217 PPAP---PSLPAGPPGVK----RPPPPLMNGLPP--------RPPLPESLPPPPPGGLPL 261
Query: 689 PQLGPPLLHPPPAQSWPAQLPPRAP---LPGQMLLSGGPRGPVPQPGLQP 735
P + PP P P QLPP AP P ++ P PG+ P
Sbjct: 262 PPM-PPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHP 310
Score = 40.8 bits (94), Expect = 0.005
Identities = 53/200 (26%), Positives = 64/200 (32%), Gaps = 32/200 (16%)
Query: 200 PPALLEP---LQPPTDVSQDPRHMVL--VRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSG 254
PP L P + PP V P V G+ P G P P + P AP
Sbjct: 277 PPQLPPPAPGVHPPAPVVHPPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGV 336
Query: 255 ATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAP 314
+ P P V P PG A Q G+ P + P AP
Sbjct: 337 HPPAPGVHPPAPGVHPP--APGVHPPAPGVHPPPSAGVHPQAPGVHPAAPAVHP---QAP 391
Query: 315 GVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVST-------------VAPGSGLAPTAQ 361
GV PP AP + P PG PP PS V P + + P +
Sbjct: 392 GVHPP-----APGMHPQAPGVHPQPPGVHPSAPGVHPQPPGVHPSNPGVHPPTPMPPMLR 446
Query: 362 PGAPSMAGTVAPGGVSGPSP 381
P PS PG + P P
Sbjct: 447 PPLPS----EGPGNIPPPPP 462
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 68.6 bits (166), Expect = 2e-11
Identities = 74/232 (31%), Positives = 90/232 (38%), Gaps = 67/232 (28%)
Query: 557 RGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQ----PQGTVGASGATGQPQPQGTAQ 612
+G G Q PPG P ++ PP PQ PQG G G G P P+G
Sbjct: 702 QGHMGPQGPPG----------PQGHIGPQGPPGPQGHLGPQGPPGTQGMQGPPGPRGMQG 751
Query: 613 PP-PGAPQGPPGA--ASGPPPPGPI--LRP----------QNPGANPQLRSLLLNPPPPQ 657
PP P QG PG+ GP GP+ L P +N G PQ ++ +PP
Sbjct: 752 PPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQ-GMIMGHPPQEM 810
Query: 658 TGVPPPQASLHH--------------LQPPGAPALLPPPHQGLGQP----QLGPP--LLH 697
G PP L H PP ++L PP + G P Q GPP L
Sbjct: 811 RGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLG 870
Query: 698 PPP-----------AQSWPAQ--LPPRAPLPGQM----LLSGGPRGPVPQPG 732
PPP Q PA+ P + P+P Q LL GPR P Q G
Sbjct: 871 PPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEG 922
Score = 56.2 bits (134), Expect = 1e-07
Identities = 68/203 (33%), Positives = 81/203 (39%), Gaps = 41/203 (20%)
Query: 548 QQQKLEQQQRGMGGQQAPPG--LGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQP 605
Q+ + Q+ RGM G P G LGP E + P + Q PQG++G P
Sbjct: 825 QEMRGPQEIRGMQGPP-PQGSMLGPPQELRGPPGS-----QSQQGPPQGSLG-------P 871
Query: 606 QPQGTAQPPPGAPQGPPGAASGPPP---PGPILRPQNP--GANPQLRSLLLNPPPPQTGV 660
PQG Q PPG PQG A GP P P P + + P G P+ N TG
Sbjct: 872 PPQGGMQGPPG-PQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAP---FNQEGQSTGP 927
Query: 661 PPPQASLHHLQPPGAPALLPP--PHQGLGQPQ---LGPPLLHPPPAQS-------WPAQL 708
PP + L GA +PP P QG G + GPP H P P
Sbjct: 928 PP---LIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGGPEHG 984
Query: 709 PPRAPLPGQMLLSGGP--RGPVP 729
P R P G G P RGP P
Sbjct: 985 PERGPFRGGQDCRGPPDRRGPHP 1007
Score = 55.8 bits (133), Expect = 1e-07
Identities = 59/191 (30%), Positives = 71/191 (37%), Gaps = 35/191 (18%)
Query: 561 GQQAPPGLGPILEDQARPSQNLLQLRPPQ----PQPQGTVGASGATGQ-----------P 605
G Q PPG E+Q Q ++ PPQ P P G + G P
Sbjct: 783 GMQGPPGPR---ENQGPAPQGMIMGHPPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGP 839
Query: 606 QPQGTAQPPPGAPQGPPGAAS---------GPPPPGPILRPQNPGANPQLRSLLLNPPPP 656
PQG+ PP +GPPG+ S GPPP G + P PG PQ + P P
Sbjct: 840 PPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGP--PG--PQGQQNPARGPHP 895
Query: 657 QTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPG 716
G P Q L G A P GQ PPL+ Q ++PP P G
Sbjct: 896 SQGPIPFQQQKTPLLGDGPRA----PFNQEGQSTGPPPLIPGLGQQGAQGRIPPLNPGQG 951
Query: 717 QMLLSGGPRGP 727
G RGP
Sbjct: 952 PGPNKGDSRGP 962
Score = 53.9 bits (128), Expect = 5e-07
Identities = 133/529 (25%), Positives = 169/529 (31%), Gaps = 88/529 (16%)
Query: 239 LQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG 298
L KQ + P SG L QP P P Q+P + Q + A+ G
Sbjct: 564 LAQKQVEQIQPPPSSGTPLLGP--QPFPGQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPG 621
Query: 299 LGPRFSPITPLQQAAPGVGPPFSQA-------PAPQLPPGPP-GAPKPPPASQP-SLVST 349
+F P P Q P GPP Q PQ P GPP G P+P P +
Sbjct: 622 PQGQFRPPGPQGQMGP-QGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQRH 680
Query: 350 VAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQ-----LGAPALGGQQSVSNKLLAWSG 404
P L P PG +G G GP Q G P G G
Sbjct: 681 PGPHGPLGPQGPPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGP----PG 736
Query: 405 VLEWQEKPKPASVDANTKLTRSLPCQVYVNHGENLKTEQWP--QKLIMQLIPQQLLTTLG 462
Q P P + + P + G + Q P Q +M L P+ + G
Sbjct: 737 TQGMQGPPGPRGM-------QGPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPG 789
Query: 463 PLFRNSRMVQFHFTNKDLESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIF 522
P Q + ++G + G G P E+R
Sbjct: 790 PRENQGPAPQGMIMGHPPQEMRGPH--PPGGLLGHGPQEMRGPQEIR------------- 834
Query: 523 MGLIPYDQSGFVNGIRQVITNHKQVQQQKLEQQ----QRGMGGQQAPPGLGPILEDQARP 578
G+ G + G Q + Q Q+ Q GG Q PPG + Q P
Sbjct: 835 -GMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPG----PQGQQNP 889
Query: 579 SQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPIL--- 635
+ R P P QG + Q Q P AP G ++GPPP P L
Sbjct: 890 A------RGPHPS-QGPI-----PFQQQKTPLLGDGPRAPFNQEGQSTGPPPLIPGLGQQ 937
Query: 636 ------RPQNPGANP-QLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPP--PHQGL 686
P NPG P + PP G P + H Q G P P P +G
Sbjct: 938 GAQGRIPPLNPGQGPGPNKGDSRGPPNHHMG---PMSERRHEQ-SGGPEHGPERGPFRG- 992
Query: 687 GQPQLGPPLL---HP--PPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQ 730
GQ GPP HP P S P P ++ G GP+PQ
Sbjct: 993 GQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFGHRLREFEGRGGPLPQ 1041
Score = 53.5 bits (127), Expect = 7e-07
Identities = 65/210 (30%), Positives = 82/210 (39%), Gaps = 31/210 (14%)
Query: 545 KQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQ 604
K+ Q ++EQ+ + Q P L L+ + + + Q++PP +G GQ
Sbjct: 534 KKKTQAEIEQEMATL--QYTNPQLLEQLKIERLAQKQVEQIQPPPSSGTPLLGPQPFPGQ 591
Query: 605 PQ----PQGTAQPPPG-------APQGPPGAASGPPPPGP--ILRPQNP-----GANPQL 646
PQG QP P A GPPG PPGP + PQ P G PQ
Sbjct: 592 GPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQG 651
Query: 647 RSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWP- 705
P P G+P PQ + P P PH LG PQ GPP P S P
Sbjct: 652 FMGPQGPQGPPQGLPRPQ----DMHGPQGMQRHPGPHGPLG-PQ-GPP---GPQGSSGPQ 702
Query: 706 AQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
+ P+ P PG G P PQ L P
Sbjct: 703 GHMGPQGP-PGPQGHIGPQGPPGPQGHLGP 731
Score = 45.8 bits (107), Expect = 1e-04
Identities = 48/170 (28%), Positives = 57/170 (33%), Gaps = 32/170 (18%)
Query: 236 PGPL-QSKQPVPLPPAAPSGATL---SAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEA 291
PGP Q + P P P G L PQ + P PQ G + ++
Sbjct: 620 PGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQGMQR 679
Query: 292 AKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAP----APQLPPGPPG--APKPPPASQPS 345
LGP+ P GP S P PQ PPGP G P+ PP
Sbjct: 680 HPGPHGPLGPQGPP-----------GPQGSSGPQGHMGPQGPPGPQGHIGPQGPPG---- 724
Query: 346 LVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSV 395
P L P PG M G P G+ GP P G G Q +
Sbjct: 725 ------PQGHLGPQGPPGTQGMQGPPGPRGMQGP-PHPHGIQGGPGSQGI 767
Score = 39.7 bits (91), Expect = 0.010
Identities = 57/194 (29%), Positives = 73/194 (37%), Gaps = 41/194 (21%)
Query: 213 VSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQY 272
VSQ P + RG+ P PGP +++ P AP G + PQ+ P PP
Sbjct: 771 VSQGPLMGLNPRGMQGP------PGPRENQGP------APQGMIMGHPPQEMRGPHPPGG 818
Query: 273 QV---PGNLSAAQVAAQNAVEAAKNQKAGLGP----RFSPITPLQQAAP--GVGPPFSQA 323
+ P + Q ++ Q + LGP R P + QQ P +GPP
Sbjct: 819 LLGHGPQEMRGPQEI--RGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPP--PQ 874
Query: 324 PAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMA-GTVAP----GGVSG 378
Q PPGP G P PS G P Q P + G AP G +G
Sbjct: 875 GGMQGPPGPQGQQNPARGPHPS--------QGPIPFQQQKTPLLGDGPRAPFNQEGQSTG 926
Query: 379 PSPAQLGAPALGGQ 392
P P P LG Q
Sbjct: 927 PPPL---IPGLGQQ 937
Score = 30.0 bits (66), Expect = 8.2
Identities = 43/161 (26%), Positives = 61/161 (37%), Gaps = 17/161 (10%)
Query: 200 PPALLEPLQPPTDV----SQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPA--APS 253
PP + PP + Q+ R +RG+ P GS GP Q + P + P
Sbjct: 806 PPQEMRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPP 865
Query: 254 GATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAV--EAAKNQKAGLGPRFSPITPLQQ 311
+L PQ + PP Q N + +Q + + K G GPR +P Q
Sbjct: 866 QGSLGPPPQGGMQG-PPGPQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPR-APFNQEGQ 923
Query: 312 AA------PGVGPPFSQAPAPQLPPGP-PGAPKPPPASQPS 345
+ PG+G +Q P L PG PG K P+
Sbjct: 924 STGPPPLIPGLGQQGAQGRIPPLNPGQGPGPNKGDSRGPPN 964
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 68.2 bits (165), Expect = 3e-11
Identities = 48/139 (34%), Positives = 56/139 (40%), Gaps = 14/139 (10%)
Query: 580 QNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRP-- 637
+N L+ + P P P G P P + PPP PP G PPP P P
Sbjct: 269 KNELRRQAPPPPPP---SRGGPPPPPPPPHNSGPPP-----PPARGRGAPPPPPSRAPTA 320
Query: 638 QNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLH 697
P P S+ + PPPP PPP +L P G P PPP LG + PP
Sbjct: 321 APPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPP---PPPPSVLGVGPVAPPPPP 377
Query: 698 PPPAQSWPAQLPPRAPLPG 716
PPP P PP P G
Sbjct: 378 PPPPPPGPPP-PPGLPSDG 395
Score = 67.0 bits (162), Expect = 6e-11
Identities = 42/119 (35%), Positives = 49/119 (41%), Gaps = 13/119 (10%)
Query: 617 APQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAP 676
AP PP + GPPPP P P N G P PP G PPP S P AP
Sbjct: 276 APPPPPPSRGGPPPPPP--PPHNSGPPP--------PPARGRGAPPPPPSR---APTAAP 322
Query: 677 ALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
PP + P P ++PPP + P+ P P P +L GP P P P P
Sbjct: 323 PPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPPPPPP 381
Score = 48.9 bits (115), Expect = 2e-05
Identities = 39/105 (37%), Positives = 45/105 (42%), Gaps = 20/105 (19%)
Query: 645 QLRSLLLNPPPPQT-GVPPPQASLHHLQPPGAPALLPPPHQGLG----QPQLGPPLLHPP 699
+LR PPPP G PPP H+ PP PPP +G G P P PP
Sbjct: 271 ELRRQAPPPPPPSRGGPPPPPPPPHNSGPP------PPPARGRGAPPPPPSRAPTAAPPP 324
Query: 700 PAQSWPA-QLPP-----RAPLPGQMLLSGGPRGPVPQPGLQPSVM 738
P S P+ +PP P P L S P GP P P PSV+
Sbjct: 325 PPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPP---PSVL 366
Score = 47.4 bits (111), Expect = 5e-05
Identities = 37/110 (33%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 289 VEAAKNQKAGLGPRFSPITPLQQAAP--------GVGPPFSQAPAPQLPPGPPG-----A 335
VEA KN+ P P P + P GPP A PP PP A
Sbjct: 265 VEAVKNELRRQAP---PPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAA 321
Query: 336 PKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLG 385
P PPP S+PS+ P + + P P PS AP G P P+ LG
Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPPALPSS----APSGPPPPPPSVLG 367
Score = 47.0 bits (110), Expect = 6e-05
Identities = 37/112 (33%), Positives = 43/112 (38%), Gaps = 25/112 (22%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNA 288
P G AP P S+ P PP P + P +PP PP P A +A +
Sbjct: 303 PARGRGAPPPPPSRAPTAAPPPPP-----PSRPSVAVPPPPPNRMYPPPPPALPSSAPS- 356
Query: 289 VEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPP 340
GP P + L GVGP AP P PP PP P PPP
Sbjct: 357 -----------GPPPPPPSVL-----GVGP---VAPPPPPPPPPPPGPPPPP 389
Score = 42.7 bits (99), Expect = 0.001
Identities = 44/188 (23%), Positives = 65/188 (34%), Gaps = 30/188 (15%)
Query: 236 PGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQ 295
P P + P P PP SG A + PP PP S A AA
Sbjct: 280 PPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPP--------SRAPTAAP--------- 322
Query: 296 KAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSG 355
P P + + V PP P PP PP P P+ P +V
Sbjct: 323 ---------PPPPPSRPSVAVPPP---PPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGP 370
Query: 356 LAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEKPKPA 415
+AP P P G P G+ Q+ A G + ++ +++ + + + ++ +P
Sbjct: 371 VAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTA-GNKAALLDQIREGAQLKKVEQNSRPV 429
Query: 416 SVDANTKL 423
S L
Sbjct: 430 SCSGRDAL 437
Score = 40.4 bits (93), Expect = 0.006
Identities = 42/151 (27%), Positives = 50/151 (33%), Gaps = 26/151 (17%)
Query: 239 LQSKQPVPLPPAAPSGATLSAAPQQPLPPVPP---QYQVPGNLSAAQVAAQNAVEAAKNQ 295
L+ + P P PP+ P PP PP + P S A AA
Sbjct: 272 LRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAA---------- 321
Query: 296 KAGLGPRFSPITPLQQAAPGVGPP----FSQAPAPQLPPGPPGAPKPPPASQPSLVSTVA 351
P P + + V PP P P LP P P PPP S V VA
Sbjct: 322 --------PPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLG-VGPVA 372
Query: 352 PGSGLAPTAQPGAPSMAGTVAPGGVSGPSPA 382
P P PG P G + G P+ A
Sbjct: 373 PPPPPPPPPPPGPPPPPGLPSDGDHQVPTTA 403
Score = 39.3 bits (90), Expect = 0.013
Identities = 28/87 (32%), Positives = 34/87 (39%), Gaps = 15/87 (17%)
Query: 557 RGMGGQQAPPGLGPILEDQARP-SQNLLQLRPPQPQ-----PQGTVGASGATGQPQPQ-- 608
RG G PP P P S+ + + PP P P + +S +G P P
Sbjct: 305 RGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPS 364
Query: 609 ----GTAQPPPGAPQGPPGAASGPPPP 631
G PPP P PP GPPPP
Sbjct: 365 VLGVGPVAPPPPPPPPPP---PGPPPP 388
>gi|154800441 proline-rich protein HaeIII subfamily 1 [Homo sapiens]
Length = 166
Score = 68.2 bits (165), Expect = 3e-11
Identities = 58/152 (38%), Positives = 69/152 (45%), Gaps = 36/152 (23%)
Query: 549 QQKLEQQQRG--MGGQQAPPGLGPILED----QARPSQNLLQLRPPQPQPQGTVGASGAT 602
+Q L+++++G +GGQQ+ P G +D Q P Q Q + P P PQG
Sbjct: 39 EQFLDEERQGPPLGGQQSQPSAGDGNQDDGPQQGPPQQGGQQQQGPPP-PQGK-----PQ 92
Query: 603 GQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPP 662
G PQ G PP G PQGPP P PP RPQ P PQ PPPP
Sbjct: 93 GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRG--RPQGP---PQQGGHQQGPPPP------ 141
Query: 663 PQASLHHLQPPGAPALLPPPHQGLGQPQLGPP 694
PPG P PP QG G+PQ GPP
Sbjct: 142 ---------PPGKPQ--GPPPQG-GRPQ-GPP 160
Score = 56.6 bits (135), Expect = 8e-08
Identities = 47/123 (38%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 613 PPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVP-PPQASLHHLQ 671
PP G Q P A G GP P G Q PPPPQ PPQ H
Sbjct: 49 PPLGGQQSQPSAGDGNQDDGPQQGPPQQGGQQQQ-----GPPPPQGKPQGPPQQGGHPPP 103
Query: 672 PPGAPALLPPPHQGLGQPQLGPPLLHP--PPAQSWPAQLPPRAPLPGQMLLSGGPRGPVP 729
P G P PP QG G P+ PP P PP Q Q PP P G P+GP P
Sbjct: 104 PQGRPQ--GPPQQG-GHPR--PPRGRPQGPPQQGGHQQGPPPPP-------PGKPQGPPP 151
Query: 730 QPG 732
Q G
Sbjct: 152 QGG 154
Score = 37.4 bits (85), Expect = 0.051
Identities = 34/106 (32%), Positives = 38/106 (35%), Gaps = 23/106 (21%)
Query: 240 QSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG- 298
Q +Q P P P G PQQ P PPQ + G Q+ G
Sbjct: 79 QQQQGPPPPQGKPQGP-----PQQGGHPPPPQGRPQG----------------PPQQGGH 117
Query: 299 -LGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQ 343
PR P P QQ GPP PQ PP G P+ PP Q
Sbjct: 118 PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAPK---------PPPASQPSLVSTVAPGSGLAPTA 360
Q P GPP Q PP P G P+ PPP +P G P
Sbjct: 65 QDDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQ-GPPQQGGHPRPPRG 123
Query: 361 QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQ 392
+P P G G P G P GG+
Sbjct: 124 RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGR 155
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 67.8 bits (164), Expect = 4e-11
Identities = 75/234 (32%), Positives = 92/234 (39%), Gaps = 39/234 (16%)
Query: 196 EKAAPPALLEPL-----QPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPA 250
++ PP+ PL PP + P +P A GP +P P PA
Sbjct: 103 QRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGP----EPAPAGPA 158
Query: 251 APSGATLSAAPQQPLP---------PVPPQYQVPG-----NLSAAQV----AAQNAVEAA 292
P+G AA P P P P + PG N SAA + AA AV
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLV 218
Query: 293 KNQKAGLGPRFSPITP--LQQAAPGVG---PPFSQAPAPQLPPGPPG---APKPPPASQP 344
N A L P P P + Q P VG PP AP+P P P AP PPP +
Sbjct: 219 NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPA 278
Query: 345 SLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNK 398
+L +G PTA P P A GG +G +PA APA GG VS +
Sbjct: 279 TLARPPGHPAG-PPTAAPAVPPPA-AAQNGGSAGAAPAP--APAAGGPAGVSGQ 328
Score = 59.3 bits (142), Expect = 1e-08
Identities = 65/213 (30%), Positives = 79/213 (37%), Gaps = 48/213 (22%)
Query: 558 GMGGQQAPPGLGPILEDQ--ARPSQNLLQLRP------PQPQPQGTVGAS----GATGQP 605
G G Q G +L A P+ +L+ P P+P GTV + GA P
Sbjct: 191 GPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP 250
Query: 606 QPQGTAQPPPGAPQ-GPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQ 664
P A PP AP P AA PPPP P + PG +P PP VPPP
Sbjct: 251 AP--AAPSPPAAPAPAAPAAAPPPPPPAPATLARPPG-HPA------GPPTAAPAVPPPA 301
Query: 665 ASLHHLQPPGAPALLPPPHQGLGQP-----QLGPPLLHPPPAQSWPAQLPPR----APLP 715
A+ Q G+ P P G P Q GP PA A+ P R AP
Sbjct: 302 AA----QNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPA 357
Query: 716 GQMLLSGGP-------------RGPVPQPGLQP 735
Q L + GP +G +P P P
Sbjct: 358 AQTLAASGPASTAASMVIGPTMQGALPSPAAVP 390
Score = 48.5 bits (114), Expect = 2e-05
Identities = 67/223 (30%), Positives = 83/223 (37%), Gaps = 54/223 (24%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASG-----ATGQPQPQGTA--- 611
G PP G +ARP Q RP P P+ + +G A +P P+G+A
Sbjct: 84 GAAPEPPPAG-----RARPGGGGPQ-RPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSC 137
Query: 612 -------------QPPPGAPQGP-----------PGAASGP---PPPGPILRPQNPGANP 644
+P P P P PG GP P PGP +P PGA
Sbjct: 138 APVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGP-GKPAGPGAAQ 196
Query: 645 QLR--SLLLN----PPPPQTGVPPPQASLHHLQPPGAP--ALLPPPHQGLGQPQLGPPLL 696
L + LLN P + V A+L L P AP + PP G P P
Sbjct: 197 TLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPP-APAAP 255
Query: 697 HPP--PAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSV 737
PP PA + PA PP P P L+ P P P P+V
Sbjct: 256 SPPAAPAPAAPAAAPPPPP-PAPATLARPPGHPAGPPTAAPAV 297
Score = 47.8 bits (112), Expect = 4e-05
Identities = 62/206 (30%), Positives = 75/206 (36%), Gaps = 48/206 (23%)
Query: 558 GMGGQQAPPGLGPILE-DQARPSQNLLQLRPPQPQPQGTVG---------ASGATGQPQP 607
G GG Q P P A P+ +LRPP P+G+ G A A +P P
Sbjct: 98 GGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPP---PEGSAGSCAPVPAAAAVAAGPEPAP 154
Query: 608 QGTAQPPP----GAPQGP-PGAASGPPP-PGPILRPQNPGANPQLR--SLLLNPPPPQTG 659
G A+P A GP PG GP P PGP +P PGA L + LLN
Sbjct: 155 AGPAKPAGPAALAARAGPGPGPGPGPGPGPGPG-KPAGPGAAQTLNGSAALLNS------ 207
Query: 660 VPPPQASLHHLQPP-------GAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRA 712
HH P G ALLP P +P ++ PP A P A
Sbjct: 208 --------HHAAAPAVSLVNNGPAALLPLP-----KPAAPGTVIQTPPFVGAAAPPAPAA 254
Query: 713 PLPGQMLLSGGPRGPVPQPGLQPSVM 738
P P P P P P+ +
Sbjct: 255 PSPPAAPAPAAPAAAPPPPPPAPATL 280
Score = 45.4 bits (106), Expect = 2e-04
Identities = 47/144 (32%), Positives = 55/144 (38%), Gaps = 28/144 (19%)
Query: 592 PQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLL 651
P G GA A G A PP A + PG GP PGP +P+ +
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPG-GGGPQRPGP--------PSPRRPLVPA 117
Query: 652 NPPPPQTGV-PPPQASLHHLQP-PGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLP 709
P PP + PPP+ S P P A A+ P P P + PA L
Sbjct: 118 GPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPE----------PAPAGPAKPAGPAALA 167
Query: 710 PRA-PLPGQMLLSGGPRGPVPQPG 732
RA P PG GP GP P PG
Sbjct: 168 ARAGPGPGP-----GP-GPGPGPG 185
Score = 45.1 bits (105), Expect = 2e-04
Identities = 48/158 (30%), Positives = 54/158 (34%), Gaps = 54/158 (34%)
Query: 245 VPLP-PAAPS---------GATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKN 294
+PLP PAAP GA AP P PP P
Sbjct: 226 LPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAP------------------------ 261
Query: 295 QKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGS 354
AAP PP PAP PPG P PP + P++ A +
Sbjct: 262 ---------------APAAPAAAPP-PPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQN 305
Query: 355 GLAPTAQPGAPSMAGTVAPGGVSG-PSP-AQLGAPALG 390
G + A P AG P GVSG P P A APA G
Sbjct: 306 GGSAGAAPAPAPAAG--GPAGVSGQPGPGAAAAAPAPG 341
Score = 42.4 bits (98), Expect = 0.002
Identities = 47/172 (27%), Positives = 61/172 (35%), Gaps = 42/172 (24%)
Query: 597 GASGATGQPQPQGTAQPPPGAPQ----------------GPPGAASGPPPPG------PI 634
GA GA +P P G A+P G PQ PP A PPP G P+
Sbjct: 81 GAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPV 140
Query: 635 LRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPG-APALLPPPHQGLGQPQLGP 693
A P+ P P P A+L PG P P P G G+P
Sbjct: 141 PAAAAVAAGPE-------PAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKP---- 189
Query: 694 PLLHPPPAQSWPAQL----PPRAPLPGQMLLSGGPRG--PVPQPGLQPSVME 739
P AQ+ A P L++ GP P+P+P +V++
Sbjct: 190 --AGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQ 239
Score = 40.8 bits (94), Expect = 0.005
Identities = 51/193 (26%), Positives = 66/193 (34%), Gaps = 22/193 (11%)
Query: 556 QRGMGGQQAPPGLGPILED-----QARP--SQNLLQLRPPQPQPQGTVGASGATGQPQPQ 608
Q G G A P G E QA P +Q L P +G + P P
Sbjct: 328 QPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPA 387
Query: 609 GTAQPPPGAPQGPPGAASGPPPPGPILRP--QNPGANPQLRSLLLNPPPPQTGVPPPQAS 666
P PG P G P A+G P G L +L P PQ PPQ
Sbjct: 388 AVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQ----PPQ-- 441
Query: 667 LHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRG 726
P PP L + + G L+ P A AQ+ +A Q ++ P
Sbjct: 442 ----NPTNIQNFQLPPGMVLVRSENGQLLMIPQQAL---AQMQAQAHAQPQTTMAPRPAT 494
Query: 727 PVPQPGLQPSVME 739
P P +Q S ++
Sbjct: 495 PTSAPPVQISTVQ 507
Score = 40.4 bits (93), Expect = 0.006
Identities = 52/197 (26%), Positives = 68/197 (34%), Gaps = 31/197 (15%)
Query: 258 SAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAP--- 314
SAA L P P+ + +AA + V + AG GP +P AAP
Sbjct: 36 SAAHHHHLAPRTPEVRA----AAAGALGNHVVSGSPAGAAGAGPA-APAEGAPGAAPEPP 90
Query: 315 --------GVGPPFSQAPAPQLP-----PGPPGAP-KPPPASQPS------LVSTVAPGS 354
G GP P+P+ P P PP A +PPP + VA G
Sbjct: 91 PAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGP 150
Query: 355 GLAPT--AQPGAPS-MAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGVLEWQEK 411
AP A+P P+ +A PG GP P P + L + +L
Sbjct: 151 EPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHA 210
Query: 412 PKPASVDANTKLTRSLP 428
PA N LP
Sbjct: 211 AAPAVSLVNNGPAALLP 227
Score = 40.0 bits (92), Expect = 0.008
Identities = 76/292 (26%), Positives = 106/292 (36%), Gaps = 31/292 (10%)
Query: 189 PALRLLFEKAAPPALL---EPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQ-SKQP 244
PA+ L+ P ALL +P P T + P +AP P + P
Sbjct: 213 PAVSLV--NNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 245 VPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEA---AKNQKAGLGP 301
P PPA ATL+ P P P VP +A + A A A AG+
Sbjct: 271 PPPPPAP---ATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSG 327
Query: 302 RFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQ 361
+ P APGV +++P + PP A + AS P ++ A + PT Q
Sbjct: 328 QPGPGAAAAAPAPGVK---AESPKRVVQAAPPAA-QTLAASGP---ASTAASMVIGPTMQ 380
Query: 362 PGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGV-------LEWQEKPKP 414
PS A V P P+ GA Q SG+ + P+P
Sbjct: 381 GALPSPA-AVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQP 439
Query: 415 ASVDANTKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQ---QLLTTLGP 463
N + + P V V EN + PQ+ + Q+ Q Q TT+ P
Sbjct: 440 PQNPTNIQNFQLPPGMVLV-RSENGQLLMIPQQALAQMQAQAHAQPQTTMAP 490
Score = 35.8 bits (81), Expect = 0.15
Identities = 102/446 (22%), Positives = 158/446 (35%), Gaps = 68/446 (15%)
Query: 233 GSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAA 292
G+A QS P + ATL+ P P PPQ P N+ Q+ + +
Sbjct: 403 GAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQN--PTNIQNFQLPPGMVLVRS 460
Query: 293 KNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTV-A 351
+N + + P+ + QA P + AP P P P P +STV A
Sbjct: 461 ENGQLLMIPQQA--LAQMQAQAHAQPQTTMAPRPATPTSAP----------PVQISTVQA 508
Query: 352 PGSGL-----APTAQPGAPSMAGT-VAPGGVSGPSPAQLGAPALGGQQSVSNKLLAWSGV 405
PG+ + PT S A T V P SP LGG ++ A +
Sbjct: 509 PGTPIIARQVTPTTIIKQVSQAQTTVQPSATLQRSPGVQPQLVLGGAAQTASLGTATAVQ 568
Query: 406 LEWQEKPKPASVDANTKLTRSLPCQVYVNHGENLKTEQWPQKLIMQLIPQQLLTTLGPLF 465
++ P + ++ T ++ EN+K + L+TL L
Sbjct: 569 TGTPQRTVPGATTTSSAATETM---------ENVKK------------CKNFLSTLIKLA 607
Query: 466 RNSRMVQFHFTNKDLESLKGLYRIMGNGFAGCVHFPHTAPCEVRVLMLLYSSKKKIFMGL 525
+ + + + ++K L + + +G F R+ L SS + L
Sbjct: 608 SSGKQ-----STETAANVKELVQNLLDGKIEAEDFTS------RLYRELNSSPQPY---L 653
Query: 526 IPYDQSGFVNGIRQVITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQA-------RP 578
+P+ + + +RQ+ + QQ QQQ QA L ++ +
Sbjct: 654 VPFLKRS-LPALRQLTPDSAAFIQQS--QQQPPPPTSQATTALTAVVLSSSVQRTAGKTA 710
Query: 579 SQNLLQLRPPQPQ-PQGTVGASGATGQPQPQGTAQPP-PGAPQGPPGAASGPPPPGPILR 636
+ L+PP Q T G GQP P QPP PGA PP P + +
Sbjct: 711 ATVTSALQPPVLSLTQPTQVGVGKQGQPTPLVIQQPPKPGALIRPPQVTLTQTPMVALRQ 770
Query: 637 PQNPGANPQLRSLLLNPPPPQTGVPP 662
P N + + LNP P V P
Sbjct: 771 PHNRIMLTTPQQIQLNPLQPVPVVKP 796
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 67.0 bits (162), Expect = 6e-11
Identities = 62/197 (31%), Positives = 78/197 (39%), Gaps = 42/197 (21%)
Query: 184 SPRKLPAL--RLLFEKAAPPALLEPLQPPTD--VSQDPRHMVLVRGLVLPVGGGSA---- 235
+P PAL L+ + PP L P PP V PR + + PV GS
Sbjct: 226 APALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAPV 285
Query: 236 -PGPLQSKQP-----VPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAV 289
PGP + P P+PP P + P P+PP PP +VP A+V
Sbjct: 286 PPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMARVPPGPPMARVPP---- 341
Query: 290 EAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPP-PASQPSLVS 348
GP +P+ P GPP + LPPGPP AP PP P P
Sbjct: 342 ----------GPPMAPLPP--------GPPMA-----PLPPGPPMAPLPPGPPMAPLPPR 378
Query: 349 TVAPGSGLAPTAQPGAP 365
+ P +GLAP AP
Sbjct: 379 SHVPHTGLAPVHITWAP 395
Score = 66.6 bits (161), Expect = 8e-11
Identities = 60/182 (32%), Positives = 71/182 (39%), Gaps = 20/182 (10%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQ 619
G A P L P L P + P P P P A PP AP
Sbjct: 221 GAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPP----RPPMVPMPPRPPIAPMPPMAPV 276
Query: 620 GPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVP--PPQASLHHLQPPGAPA 677
PPG+ P PPGP + P P P + + P PP VP PP A + PPG P
Sbjct: 277 -PPGSRMAPVPPGPRMAPVPPW--PPMAP--VPPWPPMAPVPTGPPMAPV----PPGPPM 327
Query: 678 LLPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPL----PGQMLLSGGPRGPVPQPGL 733
PP + + GPP+ PP A LPP P+ PG + PR VP GL
Sbjct: 328 ARVPPGPPMARVPPGPPMAPLPPGPPM-APLPPGPPMAPLPPGPPMAPLPPRSHVPHTGL 386
Query: 734 QP 735
P
Sbjct: 387 AP 388
Score = 41.6 bits (96), Expect = 0.003
Identities = 44/144 (30%), Positives = 53/144 (36%), Gaps = 32/144 (22%)
Query: 249 PAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITP 308
PA + PQ P PPV P +P + + PR PI P
Sbjct: 227 PALDPALCVHLVPQLPRPPVLPVPPMP----------------PRPPMVPMPPR-PPIAP 269
Query: 309 LQQAAPGVGPPFSQAPAP------QLPPGPPGAPKPP-----PASQPSLVSTVAPGSGLA 357
+ AP V P AP P +PP PP AP PP P ++ V PG +A
Sbjct: 270 MPPMAP-VPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGPPMA 328
Query: 358 PTAQPGAPSMAGTVAPGGVSGPSP 381
P P MA V PG P P
Sbjct: 329 RV--PPGPPMA-RVPPGPPMAPLP 349
Score = 35.4 bits (80), Expect = 0.19
Identities = 29/83 (34%), Positives = 34/83 (40%), Gaps = 16/83 (19%)
Query: 312 AAPGVGPPFSQAPAPQLP-----PGPPGAPKPPPASQPSL--------VSTVAPGSGLAP 358
AAP + P PQLP P PP P+PP P ++ V PGS +AP
Sbjct: 225 AAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIAPMPPMAPVPPGSRMAP 284
Query: 359 TAQPGAPSMAGTVAPGGVSGPSP 381
P P MA V P P P
Sbjct: 285 V--PPGPRMA-PVPPWPPMAPVP 304
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 66.6 bits (161), Expect = 8e-11
Identities = 58/199 (29%), Positives = 78/199 (39%), Gaps = 40/199 (20%)
Query: 545 KQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQ 604
K+++ K E PP + PS+ + PP P GT+
Sbjct: 544 KELEDAKKEMASLSAAAITVPPSV---------PSRAPVPPAPPLPGDSGTI----IPPP 590
Query: 605 PQPQGTAQPPPGAPQGPPGAASGPPPPGPIL---RPQNPGANPQLRSLLLNPPPPQTG-- 659
P P + PPP P PP PP PG + P PG ++PPPP +G
Sbjct: 591 PAPGDSTTPPPPPPPPPPP----PPLPGGVCISSPPSLPGGTA------ISPPPPLSGDA 640
Query: 660 -VPPPQASLHHLQPPGAPAL-----LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAP 713
+PPP + P +L +PPP G ++ PP PPP PP P
Sbjct: 641 TIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPP---PPPLPGSAGIPPPPPP 697
Query: 714 LPGQMLLSGGPRGPVPQPG 732
LPG+ +G P P P PG
Sbjct: 698 LPGE---AGMPPPPPPLPG 713
Score = 59.7 bits (143), Expect = 1e-08
Identities = 54/163 (33%), Positives = 67/163 (41%), Gaps = 36/163 (22%)
Query: 564 APPGL-GPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPP 622
+PP L G P + PP P P+G VG + P GTA PPP P
Sbjct: 620 SPPSLPGGTAISPPPPLSGDATIPPPPPLPEG-VGIPSPSSLPG--GTAIPPPPPL---P 673
Query: 623 GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPP---QTGVPPPQASLHHLQPPGAPAL- 678
G+A PPPP P+ P + G P PPPP + G+PPP L PG P +
Sbjct: 674 GSARIPPPPPPL--PGSAGIPP--------PPPPLPGEAGMPPPPPPL-----PGGPGIP 718
Query: 679 ----------LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPR 711
+PPP G+G P P P A P L P+
Sbjct: 719 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPK 761
Score = 53.1 bits (126), Expect = 9e-07
Identities = 50/196 (25%), Positives = 70/196 (35%), Gaps = 28/196 (14%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQP----------------LPPVPPQY 272
P G + P P P PP P G +S+ P P +PP PP
Sbjct: 590 PPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLP 649
Query: 273 QVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP-------FSQAPA 325
+ G S + + A+ R P P + G+ PP P
Sbjct: 650 EGVGIPSPSSLPGGTAIPPPPPLPGSA--RIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP 707
Query: 326 PQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLG 385
P PG PG P PPP + PG G+ P G A V P G+ +P +L
Sbjct: 708 PPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGL---TPKKLY 764
Query: 386 APALGGQQSVSNKLLA 401
P + ++ +KL+A
Sbjct: 765 KPEVQLRRPNWSKLVA 780
Score = 48.9 bits (115), Expect = 2e-05
Identities = 47/162 (29%), Positives = 58/162 (35%), Gaps = 18/162 (11%)
Query: 236 PGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQ 295
P P S +P PP AP +T P P PP PP +PG + + + A
Sbjct: 578 PLPGDSGTIIP-PPPAPGDSTTPPPPPPPPPPPPP---LPGGVCISSPPSLPGGTAISPP 633
Query: 296 KAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGP--PGAPKPPPASQPSLVSTVAPG 353
G P P G+ P S +PP P PG+ + PP P PG
Sbjct: 634 PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP------LPG 687
Query: 354 SGLAPTAQPGAPSMAG-----TVAPGGVSGPSPAQL-GAPAL 389
S P P P AG PGG P P G P +
Sbjct: 688 SAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGI 729
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/106 (34%), Positives = 40/106 (37%), Gaps = 28/106 (26%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQ 619
GG PP P L AR PP P P G+ G P P G P
Sbjct: 662 GGTAIPPP--PPLPGSARI--------PPPPPP-----LPGSAGIPPPPPPLPGEAGMPP 706
Query: 620 GPPGAASGP--PPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP 663
PP GP PPP P P PG + PPPP G+PPP
Sbjct: 707 PPPPLPGGPGIPPPPPF--PGGPG---------IPPPPPGMGMPPP 741
Score = 39.3 bits (90), Expect = 0.013
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 305 PITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGA 364
P PL + + PP AP P PP P PPP P V +P S TA
Sbjct: 575 PAPPLPGDSGTIIPP-PPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP 633
Query: 365 PSMAGTVA-------PGGVSGPSPAQL 384
P ++G P GV PSP+ L
Sbjct: 634 PPLSGDATIPPPPPLPEGVGIPSPSSL 660
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 66.6 bits (161), Expect = 8e-11
Identities = 58/199 (29%), Positives = 78/199 (39%), Gaps = 40/199 (20%)
Query: 545 KQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQ 604
K+++ K E PP + PS+ + PP P GT+
Sbjct: 553 KELEDAKKEMASLSAAAITVPPSV---------PSRAPVPPAPPLPGDSGTI----IPPP 599
Query: 605 PQPQGTAQPPPGAPQGPPGAASGPPPPGPIL---RPQNPGANPQLRSLLLNPPPPQTG-- 659
P P + PPP P PP PP PG + P PG ++PPPP +G
Sbjct: 600 PAPGDSTTPPPPPPPPPPP----PPLPGGVCISSPPSLPGGTA------ISPPPPLSGDA 649
Query: 660 -VPPPQASLHHLQPPGAPAL-----LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAP 713
+PPP + P +L +PPP G ++ PP PPP PP P
Sbjct: 650 TIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPP---PPPLPGSAGIPPPPPP 706
Query: 714 LPGQMLLSGGPRGPVPQPG 732
LPG+ +G P P P PG
Sbjct: 707 LPGE---AGMPPPPPPLPG 722
Score = 59.7 bits (143), Expect = 1e-08
Identities = 54/163 (33%), Positives = 67/163 (41%), Gaps = 36/163 (22%)
Query: 564 APPGL-GPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPP 622
+PP L G P + PP P P+G VG + P GTA PPP P
Sbjct: 629 SPPSLPGGTAISPPPPLSGDATIPPPPPLPEG-VGIPSPSSLPG--GTAIPPPPPL---P 682
Query: 623 GAASGPPPPGPILRPQNPGANPQLRSLLLNPPPP---QTGVPPPQASLHHLQPPGAPAL- 678
G+A PPPP P+ P + G P PPPP + G+PPP L PG P +
Sbjct: 683 GSARIPPPPPPL--PGSAGIPP--------PPPPLPGEAGMPPPPPPL-----PGGPGIP 727
Query: 679 ----------LPPPHQGLGQPQLGPPLLHPPPAQSWPAQLPPR 711
+PPP G+G P P P A P L P+
Sbjct: 728 PPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGLTPK 770
Score = 53.1 bits (126), Expect = 9e-07
Identities = 50/196 (25%), Positives = 70/196 (35%), Gaps = 28/196 (14%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQP----------------LPPVPPQY 272
P G + P P P PP P G +S+ P P +PP PP
Sbjct: 599 PPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPPPPLSGDATIPPPPPLP 658
Query: 273 QVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPP-------FSQAPA 325
+ G S + + A+ R P P + G+ PP P
Sbjct: 659 EGVGIPSPSSLPGGTAIPPPPPLPGSA--RIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP 716
Query: 326 PQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLG 385
P PG PG P PPP + PG G+ P G A V P G+ +P +L
Sbjct: 717 PPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPFGFGVPAAPVLPFGL---TPKKLY 773
Query: 386 APALGGQQSVSNKLLA 401
P + ++ +KL+A
Sbjct: 774 KPEVQLRRPNWSKLVA 789
Score = 48.9 bits (115), Expect = 2e-05
Identities = 47/162 (29%), Positives = 58/162 (35%), Gaps = 18/162 (11%)
Query: 236 PGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQ 295
P P S +P PP AP +T P P PP PP +PG + + + A
Sbjct: 587 PLPGDSGTIIP-PPPAPGDSTTPPPPPPPPPPPPP---LPGGVCISSPPSLPGGTAISPP 642
Query: 296 KAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGP--PGAPKPPPASQPSLVSTVAPG 353
G P P G+ P S +PP P PG+ + PP P PG
Sbjct: 643 PPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPP------LPG 696
Query: 354 SGLAPTAQPGAPSMAG-----TVAPGGVSGPSPAQL-GAPAL 389
S P P P AG PGG P P G P +
Sbjct: 697 SAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGI 738
Score = 45.1 bits (105), Expect = 2e-04
Identities = 37/106 (34%), Positives = 40/106 (37%), Gaps = 28/106 (26%)
Query: 560 GGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQ 619
GG PP P L AR PP P P G+ G P P G P
Sbjct: 671 GGTAIPPP--PPLPGSARI--------PPPPPP-----LPGSAGIPPPPPPLPGEAGMPP 715
Query: 620 GPPGAASGP--PPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPP 663
PP GP PPP P P PG + PPPP G+PPP
Sbjct: 716 PPPPLPGGPGIPPPPPF--PGGPG---------IPPPPPGMGMPPP 750
Score = 39.3 bits (90), Expect = 0.013
Identities = 29/87 (33%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 305 PITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGA 364
P PL + + PP AP P PP P PPP P V +P S TA
Sbjct: 584 PAPPLPGDSGTIIPP-PPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP 642
Query: 365 PSMAGTVA-------PGGVSGPSPAQL 384
P ++G P GV PSP+ L
Sbjct: 643 PPLSGDATIPPPPPLPEGVGIPSPSSL 669
>gi|54860079 nadrin isoform 1 [Homo sapiens]
Length = 881
Score = 65.9 bits (159), Expect = 1e-10
Identities = 71/226 (31%), Positives = 88/226 (38%), Gaps = 40/226 (17%)
Query: 543 NHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGAT 602
N+ Q+ + Q Q G Q G + A PS + L+ +P P +
Sbjct: 593 NNSQIASGQ-NQPQAAAGSHQLSMGQP---HNAAGPSPHTLRRAVKKPAPAPPKPGNPPP 648
Query: 603 GQPQPQ---GTAQPPPGAPQGPPGAASGPP------PPGPILRPQNPGANPQLRSLLL-- 651
G P Q GT+Q PP PP + PP PPG P A + S L
Sbjct: 649 GHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPI 708
Query: 652 ---NPPPPQTGVPPPQAS-LHHLQP----PGAPALLPPPHQGLGQPQLGPPLLHPPPAQS 703
N PPPQ PP QA+ L H +P P P LP H GL QP PP PP+
Sbjct: 709 QAPNHPPPQ---PPTQATPLMHTKPNSQGPPNPMALPSEH-GLEQPSHTPPQTPTPPSTP 764
Query: 704 WPAQLPPRAPLPGQMLLSGGPR------------GPVPQPGLQPSV 737
+ P P P Q L G P PVP+P +PSV
Sbjct: 765 PLGKQNPSLPAP-QTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSV 809
Score = 43.9 bits (102), Expect = 5e-04
Identities = 44/159 (27%), Positives = 56/159 (35%), Gaps = 23/159 (14%)
Query: 235 APGPLQSKQPVPLPPAAPSGATLSAAPQQP--LPPVPPQY----------QVPGNLSAAQ 282
AP P + P PP P G + S Q P L P PP Q PG Q
Sbjct: 637 APAPPKPGNP---PPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPG-----Q 688
Query: 283 VAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPAS 342
+A + + A + + L P +P P Q P P Q PP P P
Sbjct: 689 PSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLE 748
Query: 343 QPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
QPS P P PS+ AP ++G +P
Sbjct: 749 QPSHTPPQTPTPPSTPPLGKQNPSLP---APQTLAGGNP 784
Score = 41.6 bits (96), Expect = 0.003
Identities = 47/169 (27%), Positives = 62/169 (36%), Gaps = 15/169 (8%)
Query: 234 SAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAK 293
+A G Q P A PS TL A ++P P PP+ PGN Q++ ++
Sbjct: 606 AAAGSHQLSMGQPHNAAGPSPHTLRRAVKKP-APAPPK---PGNPPPGHPGGQSSSGTSQ 661
Query: 294 N--QKAGLGPRFSPITPLQQAAPGVGPPF--SQAPAPQ------LPPGPPGAPKPPPASQ 343
+ + P SP P Q G P SQ AP+ P P P P P +Q
Sbjct: 662 HPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQ 721
Query: 344 PSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQ 392
+ + P S P PS G P +P P LG Q
Sbjct: 722 ATPLMHTKPNS-QGPPNPMALPSEHGLEQPSHTPPQTPTPPSTPPLGKQ 769
Score = 37.4 bits (85), Expect = 0.051
Identities = 42/167 (25%), Positives = 53/167 (31%), Gaps = 10/167 (5%)
Query: 201 PALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAA 260
P P P Q P L P S+ P+Q+ P P + +
Sbjct: 670 PPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTK 729
Query: 261 PQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPF 320
P PP P +P Q + LG + +P P Q G P
Sbjct: 730 PNSQGPPNP--MALPSEHGLEQPSHTPPQTPTPPSTPPLGKQ-NPSLPAPQTLAGGNPET 786
Query: 321 SQAPAPQLP-----PGPPGAPKPPPASQPSLVSTVAPGS--GLAPTA 360
+Q A LP P P P PP QP V + S APTA
Sbjct: 787 AQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTA 833
Score = 37.0 bits (84), Expect = 0.067
Identities = 46/184 (25%), Positives = 58/184 (31%), Gaps = 29/184 (15%)
Query: 568 LGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQP---PPGAPQGPPGA 624
L PI P Q Q P + G P G QP PP P
Sbjct: 705 LSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTP------ 758
Query: 625 ASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQT--GVPPPQASLHHLQPPGAPALLPPP 682
PP P L QNP P PQT G P A H P P +P P
Sbjct: 759 ---TPPSTPPLGKQNPSL-----------PAPQTLAGGNPETAQPHAGTLP-RPRPVPKP 803
Query: 683 HQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDI 742
+P + PP P + + L AP +++ R P + P + D
Sbjct: 804 R---NRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSA 860
Query: 743 LMDL 746
D+
Sbjct: 861 SKDV 864
Score = 35.4 bits (80), Expect = 0.19
Identities = 43/158 (27%), Positives = 57/158 (36%), Gaps = 22/158 (13%)
Query: 246 PLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSP 305
PLPP G+T+ A +P PPQ + S +A + G G P
Sbjct: 526 PLPPT--DGSTVVPAGPEP----PPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKP 579
Query: 306 ITPLQQAAP-----------GVGPPFSQAPAPQLPPGPP-GAPKPPPASQPSLVSTVAPG 353
P+ A P G P + A + QL G P A P P + V AP
Sbjct: 580 KDPVSAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPA 639
Query: 354 ---SGLAPTAQPGAPSMAGTVA-PGGVSGPSPAQLGAP 387
G P PG S +GT P +S P + +P
Sbjct: 640 PPKPGNPPPGHPGGQSSSGTSQHPPSLSPKPPTRSPSP 677
Score = 35.4 bits (80), Expect = 0.19
Identities = 51/186 (27%), Positives = 60/186 (32%), Gaps = 45/186 (24%)
Query: 588 PQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGP-----PPPG----PILRPQ 638
P PQ +SG P G + P G P P P PG I Q
Sbjct: 542 PPPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPVSAAVPAPGRNNSQIASGQ 601
Query: 639 N-------------------PGANPQ-LRSLLLN--PPPPQTGVPPP-----QASLHHLQ 671
N G +P LR + P PP+ G PPP Q+S Q
Sbjct: 602 NQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNPPPGHPGGQSSSGTSQ 661
Query: 672 PPGAPALLPPPHQGLGQPQLGPPLLH---PPPAQSWPAQLPPRAPLPGQMLLSGGPRGPV 728
P P+L P P PP H PP S P+QL + P P
Sbjct: 662 HP--PSLSPKP----PTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPP 715
Query: 729 PQPGLQ 734
PQP Q
Sbjct: 716 PQPPTQ 721
Score = 31.2 bits (69), Expect = 3.7
Identities = 43/150 (28%), Positives = 52/150 (34%), Gaps = 31/150 (20%)
Query: 612 QPPPGAPQGPPGAASGPPPPGPILRPQNP---GANPQLRSLLLNPPPPQTGVPP-PQASL 667
QPP G +GP PP R ++ G P +L P P G PP P+ +
Sbjct: 524 QPPLPPTDGSTVVPAGPEPPPQSSRAESSSGGGTVPSSAGILEQGPSPGDGSPPKPKDPV 583
Query: 668 HHLQP-PG-----------APALLPPPHQ-GLGQPQ--LGP-------PLLHPPPAQSWP 705
P PG P HQ +GQP GP + P PA P
Sbjct: 584 SAAVPAPGRNNSQIASGQNQPQAAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKP 643
Query: 706 AQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
PP PG SG + P P L P
Sbjct: 644 GNPPPGH--PGGQSSSGTSQHP---PSLSP 668
>gi|54860105 nadrin isoform 2 [Homo sapiens]
Length = 803
Score = 65.9 bits (159), Expect = 1e-10
Identities = 71/226 (31%), Positives = 88/226 (38%), Gaps = 40/226 (17%)
Query: 543 NHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQLRPPQPQPQGTVGASGAT 602
N+ Q+ + Q Q G Q G + A PS + L+ +P P +
Sbjct: 515 NNSQIASGQ-NQPQAAAGSHQLSMGQP---HNAAGPSPHTLRRAVKKPAPAPPKPGNPPP 570
Query: 603 GQPQPQ---GTAQPPPGAPQGPPGAASGPP------PPGPILRPQNPGANPQLRSLLL-- 651
G P Q GT+Q PP PP + PP PPG P A + S L
Sbjct: 571 GHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPI 630
Query: 652 ---NPPPPQTGVPPPQAS-LHHLQP----PGAPALLPPPHQGLGQPQLGPPLLHPPPAQS 703
N PPPQ PP QA+ L H +P P P LP H GL QP PP PP+
Sbjct: 631 QAPNHPPPQ---PPTQATPLMHTKPNSQGPPNPMALPSEH-GLEQPSHTPPQTPTPPSTP 686
Query: 704 WPAQLPPRAPLPGQMLLSGGPR------------GPVPQPGLQPSV 737
+ P P P Q L G P PVP+P +PSV
Sbjct: 687 PLGKQNPSLPAP-QTLAGGNPETAQPHAGTLPRPRPVPKPRNRPSV 731
Score = 43.9 bits (102), Expect = 5e-04
Identities = 44/159 (27%), Positives = 56/159 (35%), Gaps = 23/159 (14%)
Query: 235 APGPLQSKQPVPLPPAAPSGATLSAAPQQP--LPPVPPQY----------QVPGNLSAAQ 282
AP P + P PP P G + S Q P L P PP Q PG Q
Sbjct: 559 APAPPKPGNP---PPGHPGGQSSSGTSQHPPSLSPKPPTRSPSPPTQHTGQPPG-----Q 610
Query: 283 VAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPAS 342
+A + + A + + L P +P P Q P P Q PP P P
Sbjct: 611 PSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLE 670
Query: 343 QPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSP 381
QPS P P PS+ AP ++G +P
Sbjct: 671 QPSHTPPQTPTPPSTPPLGKQNPSLP---APQTLAGGNP 706
Score = 43.5 bits (101), Expect = 7e-04
Identities = 48/166 (28%), Positives = 64/166 (38%), Gaps = 23/166 (13%)
Query: 231 GGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVE 290
G S G L+ K+P + +P +P PV PG ++ + QN +
Sbjct: 469 GNDSDSGTLERKRPASMA-VMEGDLVKKESPPKPKDPVSAAVPAPGRNNSQIASGQNQPQ 527
Query: 291 AAK-NQKAGLGPRFSPITP----LQQAA--PGVGPPFSQAPAPQLPPGPPGAPKPPPASQ 343
AA + + +G + P L++A P PP P PPG PG SQ
Sbjct: 528 AAAGSHQLSMGQPHNAAGPSPHTLRRAVKKPAPAPPKPGNP----PPGHPGGQSSSGTSQ 583
Query: 344 --PSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAP 387
PSL S PT P P+ PG S PS QL AP
Sbjct: 584 HPPSL-------SPKPPTRSPSPPTQHTGQPPGQPSAPS--QLSAP 620
Score = 37.4 bits (85), Expect = 0.051
Identities = 42/167 (25%), Positives = 53/167 (31%), Gaps = 10/167 (5%)
Query: 201 PALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGATLSAA 260
P P P Q P L P S+ P+Q+ P P + +
Sbjct: 592 PPTRSPSPPTQHTGQPPGQPSAPSQLSAPRRYSSSLSPIQAPNHPPPQPPTQATPLMHTK 651
Query: 261 PQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPF 320
P PP P +P Q + LG + +P P Q G P
Sbjct: 652 PNSQGPPNP--MALPSEHGLEQPSHTPPQTPTPPSTPPLGKQ-NPSLPAPQTLAGGNPET 708
Query: 321 SQAPAPQLP-----PGPPGAPKPPPASQPSLVSTVAPGS--GLAPTA 360
+Q A LP P P P PP QP V + S APTA
Sbjct: 709 AQPHAGTLPRPRPVPKPRNRPSVPPPPQPPGVHSAGDSSLTNTAPTA 755
Score = 37.0 bits (84), Expect = 0.067
Identities = 46/184 (25%), Positives = 58/184 (31%), Gaps = 29/184 (15%)
Query: 568 LGPILEDQARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQP---PPGAPQGPPGA 624
L PI P Q Q P + G P G QP PP P
Sbjct: 627 LSPIQAPNHPPPQPPTQATPLMHTKPNSQGPPNPMALPSEHGLEQPSHTPPQTP------ 680
Query: 625 ASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQT--GVPPPQASLHHLQPPGAPALLPPP 682
PP P L QNP P PQT G P A H P P +P P
Sbjct: 681 ---TPPSTPPLGKQNPSL-----------PAPQTLAGGNPETAQPHAGTLP-RPRPVPKP 725
Query: 683 HQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPSVMEDDI 742
+P + PP P + + L AP +++ R P + P + D
Sbjct: 726 R---NRPSVPPPPQPPGVHSAGDSSLTNTAPTASKIVTDSNSRVSEPHRSIFPEMHSDSA 782
Query: 743 LMDL 746
D+
Sbjct: 783 SKDV 786
>gi|158966674 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 65.5 bits (158), Expect = 2e-10
Identities = 56/152 (36%), Positives = 69/152 (45%), Gaps = 36/152 (23%)
Query: 549 QQKLEQQQRG--MGGQQAPPGLGPILED----QARPSQNLLQLRPPQPQPQGTVGASGAT 602
+Q ++++++G +GGQQ+ P G ++ Q P Q Q + P P PQG
Sbjct: 39 EQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPP-PQGK-----PQ 92
Query: 603 GQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPP 662
G PQ G PP G PQGPP P PP RPQ P PQ PPPP
Sbjct: 93 GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRG--RPQGP---PQQGGHQQGPPPP------ 141
Query: 663 PQASLHHLQPPGAPALLPPPHQGLGQPQLGPP 694
PPG P PP QG G+PQ GPP
Sbjct: 142 ---------PPGKPQ--GPPPQG-GRPQ-GPP 160
Score = 56.2 bits (134), Expect = 1e-07
Identities = 47/123 (38%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 613 PPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVP-PPQASLHHLQ 671
PP G Q P A G GP P G Q PPPPQ PPQ H
Sbjct: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQ-----GPPPPQGKPQGPPQQGGHPPP 103
Query: 672 PPGAPALLPPPHQGLGQPQLGPPLLHP--PPAQSWPAQLPPRAPLPGQMLLSGGPRGPVP 729
P G P PP QG G P+ PP P PP Q Q PP P G P+GP P
Sbjct: 104 PQGRPQ--GPPQQG-GHPR--PPRGRPQGPPQQGGHQQGPPPPP-------PGKPQGPPP 151
Query: 730 QPG 732
Q G
Sbjct: 152 QGG 154
Score = 54.7 bits (130), Expect = 3e-07
Identities = 50/149 (33%), Positives = 56/149 (37%), Gaps = 37/149 (24%)
Query: 529 DQSGFVNGIRQVITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQ---- 584
D F++ RQ Q Q + G QQ PP G + P Q Q
Sbjct: 37 DSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQ 96
Query: 585 ----LRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPP---GAASGPPPPGPILRP 637
PPQ +PQ G PQ G +PP G PQGPP G GPPPP
Sbjct: 97 QGGHPPPPQGRPQ---------GPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPP------ 141
Query: 638 QNPGANPQLRSLLLNPPPPQTGVP--PPQ 664
P PQ PPPQ G P PPQ
Sbjct: 142 --PPGKPQ-------GPPPQGGRPQGPPQ 161
Score = 37.4 bits (85), Expect = 0.051
Identities = 34/106 (32%), Positives = 38/106 (35%), Gaps = 23/106 (21%)
Query: 240 QSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG- 298
Q +Q P P P G PQQ P PPQ + G Q+ G
Sbjct: 79 QQQQGPPPPQGKPQGP-----PQQGGHPPPPQGRPQG----------------PPQQGGH 117
Query: 299 -LGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQ 343
PR P P QQ GPP PQ PP G P+ PP Q
Sbjct: 118 PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAPK---------PPPASQPSLVSTVAPGSGLAPTA 360
Q P GPP Q PP P G P+ PPP +P G P
Sbjct: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQ-GPPQQGGHPRPPRG 123
Query: 361 QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQ 392
+P P G G P G P GG+
Sbjct: 124 RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGR 155
>gi|4826944 proline-rich protein HaeIII subfamily 2 [Homo sapiens]
Length = 166
Score = 65.5 bits (158), Expect = 2e-10
Identities = 56/152 (36%), Positives = 69/152 (45%), Gaps = 36/152 (23%)
Query: 549 QQKLEQQQRG--MGGQQAPPGLGPILED----QARPSQNLLQLRPPQPQPQGTVGASGAT 602
+Q ++++++G +GGQQ+ P G ++ Q P Q Q + P P PQG
Sbjct: 39 EQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPP-PQGK-----PQ 92
Query: 603 GQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPP 662
G PQ G PP G PQGPP P PP RPQ P PQ PPPP
Sbjct: 93 GPPQQGGHPPPPQGRPQGPPQQGGHPRPPRG--RPQGP---PQQGGHQQGPPPP------ 141
Query: 663 PQASLHHLQPPGAPALLPPPHQGLGQPQLGPP 694
PPG P PP QG G+PQ GPP
Sbjct: 142 ---------PPGKPQ--GPPPQG-GRPQ-GPP 160
Score = 56.2 bits (134), Expect = 1e-07
Identities = 47/123 (38%), Positives = 49/123 (39%), Gaps = 20/123 (16%)
Query: 613 PPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVP-PPQASLHHLQ 671
PP G Q P A G GP P G Q PPPPQ PPQ H
Sbjct: 49 PPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQ-----GPPPPQGKPQGPPQQGGHPPP 103
Query: 672 PPGAPALLPPPHQGLGQPQLGPPLLHP--PPAQSWPAQLPPRAPLPGQMLLSGGPRGPVP 729
P G P PP QG G P+ PP P PP Q Q PP P G P+GP P
Sbjct: 104 PQGRPQ--GPPQQG-GHPR--PPRGRPQGPPQQGGHQQGPPPPP-------PGKPQGPPP 151
Query: 730 QPG 732
Q G
Sbjct: 152 QGG 154
Score = 54.7 bits (130), Expect = 3e-07
Identities = 50/149 (33%), Positives = 56/149 (37%), Gaps = 37/149 (24%)
Query: 529 DQSGFVNGIRQVITNHKQVQQQKLEQQQRGMGGQQAPPGLGPILEDQARPSQNLLQ---- 584
D F++ RQ Q Q + G QQ PP G + P Q Q
Sbjct: 37 DSEQFIDEERQGPPLGGQQSQPSAGDGNQNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQ 96
Query: 585 ----LRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPP---GAASGPPPPGPILRP 637
PPQ +PQ G PQ G +PP G PQGPP G GPPPP
Sbjct: 97 QGGHPPPPQGRPQ---------GPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPP------ 141
Query: 638 QNPGANPQLRSLLLNPPPPQTGVP--PPQ 664
P PQ PPPQ G P PPQ
Sbjct: 142 --PPGKPQ-------GPPPQGGRPQGPPQ 161
Score = 37.4 bits (85), Expect = 0.051
Identities = 34/106 (32%), Positives = 38/106 (35%), Gaps = 23/106 (21%)
Query: 240 QSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAG- 298
Q +Q P P P G PQQ P PPQ + G Q+ G
Sbjct: 79 QQQQGPPPPQGKPQGP-----PQQGGHPPPPQGRPQG----------------PPQQGGH 117
Query: 299 -LGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQ 343
PR P P QQ GPP PQ PP G P+ PP Q
Sbjct: 118 PRPPRGRPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGRPQGPPQGQ 163
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/92 (28%), Positives = 30/92 (32%), Gaps = 10/92 (10%)
Query: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAPK---------PPPASQPSLVSTVAPGSGLAPTA 360
Q P GPP Q PP P G P+ PPP +P G P
Sbjct: 65 QNDGPQQGPPQQGGQQQQGPPPPQGKPQGPPQQGGHPPPPQGRPQ-GPPQQGGHPRPPRG 123
Query: 361 QPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQ 392
+P P G G P G P GG+
Sbjct: 124 RPQGPPQQGGHQQGPPPPPPGKPQGPPPQGGR 155
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 64.3 bits (155), Expect = 4e-10
Identities = 71/228 (31%), Positives = 80/228 (35%), Gaps = 56/228 (24%)
Query: 563 QAPPGLG-PILEDQARP--SQNLLQLRPPQPQPQGTVGAS--GATGQPQPQGTAQPPPGA 617
QAPP L P L+ P S L L P PQ + A P P Q P
Sbjct: 395 QAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSP 454
Query: 618 PQGPPGAASGPPPPG--------PILRPQNPGANPQLRSLLLNPP--PPQTGVPPPQASL 667
P PP + S PP P+ P +P A+P + PP PP PP Q +
Sbjct: 455 PASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAK 514
Query: 668 HHLQPPGAPALLPPPHQGL--------GQ----------------------PQLGPPLLH 697
Q P PAL PP Q L GQ P L PLL
Sbjct: 515 PPPQAP--PALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQ 572
Query: 698 PPPA--QSWPAQLPPRAPLPGQMLLSGGPR-------GPVPQPGLQPS 736
PP+ S Q P R P PG GPR GP P P PS
Sbjct: 573 VPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS 620
Score = 57.8 bits (138), Expect = 4e-08
Identities = 53/171 (30%), Positives = 61/171 (35%), Gaps = 20/171 (11%)
Query: 576 ARPSQNLLQLRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPG--- 632
A PS L P P Q T + G P Q T P P P PP
Sbjct: 347 APPSLQTLPSPPATPPSQATT----SLGSPTLQATHSFLPSPPLSPLATPPPQAPPALAL 402
Query: 633 -PILRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQ-----PPGAPALLP--PPHQ 684
P+ P +P A+P L L P PQ P ++H LQ PP P P PP
Sbjct: 403 PPLQAPPSPPASPPLSPLA--TPSPQA---PNALAVHLLQAPFSPPPSPPVQAPFSPPAS 457
Query: 685 GLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQP 735
P PP PP + P Q+PP P M S P P P P
Sbjct: 458 PPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508
Score = 56.2 bits (134), Expect = 1e-07
Identities = 72/246 (29%), Positives = 94/246 (38%), Gaps = 40/246 (16%)
Query: 184 SPRKLPALRLLFEKAAPPALLEPLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQ 243
SP P ++ F A P + PP SQ P + V P S P S
Sbjct: 441 SPPPSPPVQAPFSPPASPPVSPSATPP---SQAPPSLAAPPLQVPPSPPASPP---MSPS 494
Query: 244 PVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRF 303
P P A P L+A P Q P P Q P L+ + A + A+ +A P
Sbjct: 495 ATPPPQAPPP---LAAPPLQLAKPPP---QAPPALATPPLQALPSPPASFPGQAPFSPSA 548
Query: 304 S-PITPLQQAAPGVGPPFSQAPAPQLPPGPPG-----APKPPP-------ASQPSLVSTV 350
S P++PL P PP AP Q+PP PP AP+ PP S P L +
Sbjct: 549 SLPMSPLATPPPQA-PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLAL 607
Query: 351 APGSGLAPTAQPGA----PSMAG-----TVAP----GGVSGPSPAQLGAPALGGQQSVSN 397
APG P+ P + P +AG T P G SGP +P + + +
Sbjct: 608 APGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACH 667
Query: 398 KLLAWS 403
AWS
Sbjct: 668 P-AAWS 672
Score = 54.3 bits (129), Expect = 4e-07
Identities = 47/162 (29%), Positives = 63/162 (38%), Gaps = 9/162 (5%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNL----SAAQVA 284
P+ S LQS+ P P PA P ++L+ PLP PP P +L S
Sbjct: 303 PLATPSPSAALQSQAP-PTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATP 361
Query: 285 AQNAVEAAKNQKAGLGPRFSPITPLQQAA--PGVGPPFSQAPAPQLPPGPPGAPKPPPAS 342
A + + F P PL A P PP P Q PP PP +P P +
Sbjct: 362 PSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLA 421
Query: 343 QPSLVSTVAPGSGL--APTAQPGAPSMAGTVAPGGVSGPSPA 382
PS + A L AP + P +P + +P SP+
Sbjct: 422 TPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPS 463
Score = 54.3 bits (129), Expect = 4e-07
Identities = 57/201 (28%), Positives = 72/201 (35%), Gaps = 20/201 (9%)
Query: 198 AAPPALLE-PLQPPTDVSQDPRHMVLVRGLVLPVGGGSAPGPLQSKQPVPLPPAAPSGAT 256
+APP+L P P T SQ + L P P S P P A P+ A
Sbjct: 346 SAPPSLQTLPSPPATPPSQATTSL---GSPTLQATHSFLPSPPLSPLATPPPQAPPALAL 402
Query: 257 --LSAAPQQPLPP-----VPPQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPITPL 309
L A P P P P Q P L+ + A + + +A P SP
Sbjct: 403 PPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 462
Query: 310 QQAAPGVGPPFSQAPAPQLPPGPPGAP------KPPPASQPSLVS---TVAPGSGLAPTA 360
P PP AP Q+PP PP +P PPP + P L + +A AP A
Sbjct: 463 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 522
Query: 361 QPGAPSMAGTVAPGGVSGPSP 381
P A P G +P
Sbjct: 523 LATPPLQALPSPPASFPGQAP 543
Score = 53.9 bits (128), Expect = 5e-07
Identities = 74/242 (30%), Positives = 93/242 (38%), Gaps = 50/242 (20%)
Query: 182 IVSPRK--LPALRLLFEKA----APPALLEPLQPPTDVSQDPRHMVLVRGLVLPVG-GGS 234
+ PRK PAL L +P A L+ PPT + P L L P+
Sbjct: 285 VTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT-LPATPHSSSLTCQLATPLPLAPP 343
Query: 235 APGPLQSKQPVPLPPAAPSG------------ATLSAAPQQPLPPVP-PQYQVPGNLSAA 281
+P S Q +P PPA P AT S P PL P+ P Q P L+
Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP 403
Query: 282 QVAAQNAVEAAKNQKAGLGPRFSPI-TPLQQA----------APGVGPPFSQAPAPQLPP 330
+ A + A+ P SP+ TP QA AP PP AP PP
Sbjct: 404 PLQAPPSPPAS--------PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPP 455
Query: 331 -GPPGAPKPPPASQPSLVSTVAPGSGLAPTAQ-PGAPSMAGTVAPGGVSGP-SPAQLGAP 387
PP +P P SQ AP S AP Q P +P + ++P P +P L AP
Sbjct: 456 ASPPVSPSATPPSQ-------APPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAP 508
Query: 388 AL 389
L
Sbjct: 509 PL 510
Score = 52.0 bits (123), Expect = 2e-06
Identities = 59/175 (33%), Positives = 70/175 (40%), Gaps = 31/175 (17%)
Query: 576 ARPSQ----NLLQLRPPQPQPQ--------GTVGASG-ATGQPQPQGTAQPPPGAPQGPP 622
A PSQ L LRPPQ P G + +S AT P +Q PP P P
Sbjct: 267 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPATPH 326
Query: 623 GAASGPPPPGPI-LRPQNPGANPQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPP 681
++ P+ L P +P A P L++L P PP T PP QA+ G+P L
Sbjct: 327 SSSLTCQLATPLPLAPPSPSAPPSLQTL---PSPPAT--PPSQATTSL----GSPTL-QA 376
Query: 682 PHQGLGQPQLGPPLLHPPPAQSWPAQLPPRAPLPGQMLLSGGPRGPVPQPGLQPS 736
H L P L P L PPP Q PP LP P P P PS
Sbjct: 377 THSFLPSPPLSP-LATPPP------QAPPALALPPLQAPPSPPASPPLSPLATPS 424
Score = 45.8 bits (107), Expect = 1e-04
Identities = 44/161 (27%), Positives = 60/161 (37%), Gaps = 23/161 (14%)
Query: 586 RPPQPQPQGTVGASG--ATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGAN 643
RPP P+ +V ++ +T +P P +P G P + S P+ P G
Sbjct: 199 RPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSG-- 256
Query: 644 PQLRSLLLNPPPPQTGVPPPQASLHHLQPPGAPALLPP---PHQGLGQPQLGP----PLL 696
P G P A +P G AL PP P + P LGP PL
Sbjct: 257 -----------PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLA 305
Query: 697 HPPPAQSWPAQLPPRAP-LPGQMLLSGGPRGPVPQPGLQPS 736
P P+ + +Q PP P P L+ P+P PS
Sbjct: 306 TPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPS 346
Score = 45.1 bits (105), Expect = 2e-04
Identities = 47/149 (31%), Positives = 55/149 (36%), Gaps = 21/149 (14%)
Query: 598 ASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQ 657
+S A P +GT + P Q P PP + P A P L L +P
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQ--VTPPRKDAAPALGPLSSSP---- 303
Query: 658 TGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQLGPPLLHPPPAQSWPAQL-----PPRA 712
P P A+L PP PA PH QL PL PP+ S P L PP
Sbjct: 304 LATPSPSAALQSQAPPTLPAT---PHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPAT 360
Query: 713 PLPGQMLLS-GGP-----RGPVPQPGLQP 735
P P Q S G P +P P L P
Sbjct: 361 P-PSQATTSLGSPTLQATHSFLPSPPLSP 388
Score = 35.8 bits (81), Expect = 0.15
Identities = 53/214 (24%), Positives = 77/214 (35%), Gaps = 19/214 (8%)
Query: 232 GGSAPGPLQSK-------QPVPLPPA--APSGATLSAAPQQ----PLPPVP-PQYQVPGN 277
G + PGPL K + V A AP + LSA ++ P P P P
Sbjct: 122 GTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSR 181
Query: 278 LSAAQVAAQNAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAP----QLPPGPP 333
+ +V +A+ + GPR S + + + P + P+ Q P
Sbjct: 182 AAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRS 241
Query: 334 GAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSMAGTVAPGGVSGPSPAQLGAPALGGQQ 393
+ P S P+ A G+ AP A P P G A P + APALG
Sbjct: 242 LSSSATPLSSPARSGPSARGTPRAP-AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLS 300
Query: 394 SVSNKLLAWSGVLEWQEKPKPASVDANTKLTRSL 427
S + S L+ Q P + ++ LT L
Sbjct: 301 SSPLATPSPSAALQSQAPPTLPATPHSSSLTCQL 334
Score = 35.0 bits (79), Expect = 0.25
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 13/84 (15%)
Query: 311 QAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTV--APGSGLAPTAQ------- 361
+A P ++AP L P PPG+P+PPP P+ + + A G P A+
Sbjct: 9 KAGAAARTPAARAPG-LLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG 67
Query: 362 ---PGAPSMAGTVAPGGVSGPSPA 382
P + AG G S +PA
Sbjct: 68 ATIPESAPRAGPTRSAGTSSRNPA 91
Score = 34.7 bits (78), Expect = 0.33
Identities = 60/218 (27%), Positives = 73/218 (33%), Gaps = 52/218 (23%)
Query: 563 QAPPGLG-PILE-DQARPSQNLLQL--RPPQPQPQGTVGASGAT-----GQPQPQG---- 609
QAPP L P+L+ + P+ LQ RPP P P +V T G P P
Sbjct: 561 QAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS 620
Query: 610 -----------------TAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLN 652
T + G GP G A+ PPP L +P A +
Sbjct: 621 STLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAAWSR------G 674
Query: 653 PPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLG--QPQLGPPLLHPPPAQSWPAQLP- 709
P PP P A L P PA P GL GP P P P P
Sbjct: 675 PAPPLAFRGAPGAPL-----PWPPATGPGSADGLCTIYETEGPESATPAPGALDPGPSPG 729
Query: 710 ----PRAPLPGQMLLSGGPR----GPVPQPGLQPSVME 739
A G S P+ G +P LQ SV++
Sbjct: 730 TSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 767
Score = 33.9 bits (76), Expect = 0.57
Identities = 40/173 (23%), Positives = 59/173 (34%), Gaps = 25/173 (14%)
Query: 229 PVGGGSAPGPLQSKQPVPLPPAAPSGATLSAAPQQPLPPVPPQYQVPGNLSAAQVAAQ-- 286
P G + S+ P PPA+ G A PV + G + +
Sbjct: 75 PRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 287 --NAVEAAKNQKAGLGPRFSPITPLQQAAPGVGPPFSQAPAPQLPPGP-PGAPKPPPASQ 343
+A E KA P+ S ++ A A + GP PG P P A +
Sbjct: 135 RISAEETVARGKATEAPKRSALS---------------AGARRDTSGPTPGTPSPAMARR 179
Query: 344 PSLVSTVAPGSGLAPTAQPGAPS-----MAGTVAPGGVSGPSPAQLGAPALGG 391
T AP+A+P P+ + + + PSPA P+ GG
Sbjct: 180 SRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG 232
Score = 30.0 bits (66), Expect = 8.2
Identities = 32/113 (28%), Positives = 44/113 (38%), Gaps = 22/113 (19%)
Query: 569 GPILEDQARPSQNLLQLRPP---QPQPQGT------VGASGATGQ-PQPQ-----GTAQP 613
G A + LL RPP +P P T +GA+GA G+ P + G A
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 614 PPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVPPPQAS 666
P AP+ P ++G P RP G + PP + P P +S
Sbjct: 71 PESAPRAGPTRSAGTSSRNPASRPPASGRGER-------APPAKNTSPGPVSS 116
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.136 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,443,758
Number of Sequences: 37866
Number of extensions: 3546828
Number of successful extensions: 71294
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 2283
Number of HSP's that attempted gapping in prelim test: 18206
Number of HSP's gapped (non-prelim): 24212
length of query: 747
length of database: 18,247,518
effective HSP length: 110
effective length of query: 637
effective length of database: 14,082,258
effective search space: 8970398346
effective search space used: 8970398346
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.