Guide to the Human Genome
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Name: ANAPC11 Sequence: fasta or formatted (196aa) NCBI GI: 50409810
Description:

APC11 anaphase promoting complex subunit 11 isoform 1

Referenced in:

Anaphase-promoting Complex
Cullins and SCF Complexes
Ring Finger Proteins

Other entries for this name:
alt prot [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt prot [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt prot [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt prot [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt prot [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
alt prot [84aa] APC11 anaphase promoting complex subunit 11 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.2         20           3
 C cysteine            6.1         12           2
 D aspartate           4.6          9           1
 E glutamate           3.1          6           2
 F phenylalanine       1.0          2           1
 G glycine             9.7         19           2
 H histidine           3.6          7           1
 I isoleucine          2.6          5           1
 K lysine              1.5          3           1
 L leucine             9.2         18           2
 M methionine          2.0          4           1
 N asparagine          2.6          5           1
 P proline            12.2         24           2
 Q glutamine           4.1          8           1
 R arginine            6.6         13           3
 S serine              7.1         14           2
 T threonine           4.6          9           1
 V valine              6.6         13           1
 W tryptophan          2.6          5           1
 Y tyrosine            0.0          0           0
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   APC11 anaphase promoting complex subunit 11 isoform ... 
ANAPC11               0.182   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.182   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.182   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.182   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.182   APC11 anaphase promoting complex subunit 11 isoform ...
ANAPC11               0.182   APC11 anaphase promoting complex subunit 11 isoform ...
RBX1                  0.033   ring-box 1 
RNF7                  0.028   ring finger protein 7 isoform 1 
EP300                 0.025   E1A binding protein p300 
LOC100131098          0.022   PREDICTED: hypothetical protein 
LOC100131098          0.022   PREDICTED: hypothetical protein 
OTOG                  0.020   PREDICTED: otogelin isoform 1 
OTOG                  0.020   PREDICTED: otogelin isoform 2 
LOC643355             0.020   PREDICTED: hypothetical protein 
OTOG                  0.020   PREDICTED: otogelin isoform 2 
OTOG                  0.020   PREDICTED: otogelin isoform 1 
OTOG                  0.020   PREDICTED: otogelin isoform 2 
OTOG                  0.020   PREDICTED: otogelin isoform 1 
SAPS1                 0.020   SAPS domain family, member 1 
RNF7                  0.018   ring finger protein 7 isoform 3 
LOC100292589          0.018   PREDICTED: hypothetical protein 
LOC100290121          0.018   PREDICTED: hypothetical protein XP_002346879 
LOC100289406          0.018   PREDICTED: hypothetical protein XP_002342721 
RNF31                 0.018   ring finger protein 31 
SSPO                  0.018   SCO-spondin 
FAM53A                0.018   dorsal neural-tube nuclear protein 
ANKS1A                0.015   ankyrin repeat and sterile alpha motif domain conta...
AMOTL2                0.015   angiomotin like 2 
LOC100132799          0.015   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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