TAF12 31547

Name: TAF12	Sequence: fasta or formatted (161aa)		NCBI GI: 5032153
Description: TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 20 kD		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt mRNA [161aa] TAF12 RNA polymerase II, TATA box binding protein (TBP)-associate...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 12 2 C cysteine 1.2 2 1 D aspartate 4.3 7 2 E glutamate 8.1 13 2 F phenylalanine 2.5 4 1 G glycine 5.0 8 2 H histidine 1.9 3 1 I isoleucine 5.0 8 1 K lysine 8.1 13 3 L leucine 8.7 14 2 M methionine 3.1 5 1 N asparagine 5.0 8 2 P proline 6.8 11 2 Q glutamine 6.2 10 1 R arginine 5.0 8 1 S serine 7.5 12 2 T threonine 6.2 10 2 V valine 6.2 10 2 W tryptophan 1.2 2 1 Y tyrosine 0.6 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TAF12 RNA polymerase II, TATA box binding protein (TB... TAF12 1.000 TAF12 RNA polymerase II, TATA box binding protein (... DR1 0.040 down-regulator of transcription 1 HIST3H2BB 0.030 histone cluster 3, H2bb COL7A1 0.027 alpha 1 type VII collagen precursor UNK 0.023 zinc finger CCCH-type domain containing 5 PCGF6 0.023 polycomb group ring finger 6 isoform a PCGF6 0.023 polycomb group ring finger 6 isoform b TBC1D13 0.023 TBC1 domain family, member 13 AKAP9 0.017 A-kinase anchor protein 9 isoform 2 AKAP9 0.017 A-kinase anchor protein 9 isoform 3 WDR43 0.017 WD repeat domain 43 PTBP1 0.017 polypyrimidine tract-binding protein 1 isoform c [Ho... PTBP1 0.017 polypyrimidine tract-binding protein 1 isoform b [Ho... PTBP1 0.017 polypyrimidine tract-binding protein 1 isoform a [Hom... KLHL4 0.017 kelch-like 4 isoform 2 KLHL4 0.017 kelch-like 4 isoform 1 TCF19 0.017 transcription factor 19 TCF19 0.017 transcription factor 19 CENPF 0.017 centromere protein F H2BFM 0.013 PREDICTED: H2B histone family, member M H2BFM 0.013 PREDICTED: H2B histone family, member M H2BFM 0.013 PREDICTED: H2B histone family, member M SMEK1 0.013 SMEK homolog 1, suppressor of mek1 ZNF296 0.013 zinc finger protein 296 LOC645202 0.010 PREDICTED: hypothetical protein LOC645202 GAS2L1 0.010 growth arrest-specific 2 like 1 isoform b GAS2L1 0.010 growth arrest-specific 2 like 1 isoform a GAS2L1 0.010 growth arrest-specific 2 like 1 isoform a PSPC1 0.010 paraspeckle protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.