Guide to the Human Genome
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Name: DR1 Sequence: fasta or formatted (176aa) NCBI GI: 4503381
Description:

down-regulator of transcription 1

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         22           3
 C cysteine            2.3          4           2
 D aspartate           5.1          9           4
 E glutamate          11.4         20           3
 F phenylalanine       1.7          3           1
 G glycine             2.8          5           1
 H histidine           1.1          2           1
 I isoleucine          6.2         11           1
 K lysine              5.7         10           2
 L leucine             9.1         16           2
 M methionine          1.7          3           1
 N asparagine          5.1          9           1
 P proline             2.3          4           1
 Q glutamine          10.2         18           3
 R arginine            4.5          8           2
 S serine              9.7         17           3
 T threonine           2.8          5           1
 V valine              4.5          8           2
 W tryptophan          0.6          1           1
 Y tyrosine            0.6          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   down-regulator of transcription 1 
NFYB                  0.153   nuclear transcription factor Y, beta 
POLE3                 0.111   DNA-directed DNA polymerase epsilon 3 
BRD4                  0.045   bromodomain-containing protein 4 isoform long 
GBP5                  0.045   guanylate-binding protein 5 
GBP5                  0.045   guanylate-binding protein 5 
CROCC                 0.045   ciliary rootlet coiled-coil 
TSEN34                0.041   tRNA-intron endonuclease 34 
TSEN34                0.041   tRNA-intron endonuclease 34 
TAF12                 0.038   TAF12 RNA polymerase II, TATA box binding protein (...
TAF12                 0.038   TAF12 RNA polymerase II, TATA box binding protein (TB...
DEF6                  0.038   differentially expressed in FDCP 6 homolog 
TBP                   0.038   TATA box binding protein 
FOXP2                 0.035   forkhead box P2 isoform I 
FOXP2                 0.035   forkhead box P2 isoform III 
FOXP2                 0.035   forkhead box P2 isoform II 
MED12                 0.035   mediator complex subunit 12 
ATAD2                 0.035   ATPase family, AAA domain containing 2 
SLK                   0.035   serine/threonine kinase 2 
MN1                   0.032   meningioma  1 
ZNF853                0.032   zinc finger protein 853 
FRMPD3                0.032   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.032   PREDICTED: FERM and PDZ domain containing 3 
FRMPD3                0.032   PREDICTED: FERM and PDZ domain containing 3 
MLL2                  0.032   myeloid/lymphoid or mixed-lineage leukemia 2 
TP53BP2               0.032   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.032   tumor protein p53 binding protein, 2 isoform 2 
EPC2                  0.032   enhancer of polycomb homolog 2 
WWC1                  0.029   WW and C2 domain containing 1 isoform 3 
WWC1                  0.029   WW and C2 domain containing 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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