Guide to the Human Genome
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Name: GIPC1 Sequence: fasta or formatted (236aa) NCBI GI: 42544146
Description:

regulator of G-protein signalling 19 interacting protein 1 isoform 2

Referenced in:

G Proteins
PDZ Domain

Other entries for this name:
alt prot [333aa] regulator of G-protein signalling 19 interacting protein 1 isoform 1
alt mRNA [236aa] regulator of G-protein signalling 19 interacting protein 1 isoform 2
alt prot [333aa] regulator of G-protein signalling 19 interacting protein 1 isoform 1
alt mRNA [236aa] regulator of G-protein signalling 19 interacting protein 1 isoform 2
alt prot [333aa] regulator of G-protein signalling 19 interacting protein 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         18           2
 C cysteine            0.8          2           1
 D aspartate           8.1         19           2
 E glutamate           8.5         20           2
 F phenylalanine       5.1         12           1
 G glycine            11.0         26           2
 H histidine           2.1          5           1
 I isoleucine          5.9         14           1
 K lysine              6.4         15           1
 L leucine            10.6         25           2
 M methionine          2.5          6           1
 N asparagine          1.7          4           1
 P proline             3.4          8           1
 Q glutamine           2.1          5           1
 R arginine            7.2         17           1
 S serine              4.2         10           1
 T threonine           5.1         12           1
 V valine              5.5         13           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   regulator of G-protein signalling 19 interacting pro... 
GIPC1                 1.000   regulator of G-protein signalling 19 interacting pro...
GIPC1                 1.000   regulator of G-protein signalling 19 interacting pro...
GIPC1                 1.000   regulator of G-protein signalling 19 interacting pro...
GIPC1                 1.000   regulator of G-protein signalling 19 interacting pro...
GIPC1                 1.000   regulator of G-protein signalling 19 interacting prot...
GIPC2                 0.664   PDZ domain protein GIPC2 
GIPC3                 0.651   GIPC PDZ domain containing family, member 3 
PDZD2                 0.058   PDZ domain containing 2 
MPP3                  0.038   palmitoylated membrane protein 3 
MPDZ                  0.036   multiple PDZ domain protein 
MAGI2                 0.036   membrane associated guanylate kinase, WW and PDZ dom...
LNX1                  0.036   ligand of numb-protein X 1 isoform a 
LNX1                  0.036   ligand of numb-protein X 1 isoform b 
MAGI1                 0.034   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.034   membrane associated guanylate kinase, WW and PDZ dom...
MAGI1                 0.034   membrane associated guanylate kinase, WW and PDZ dom...
MAGI3                 0.034   membrane-associated guanylate kinase-related  3 iso...
MAGI3                 0.034   membrane-associated guanylate kinase-related  3 iso...
GRIP1                 0.034   glutamate receptor interacting protein 1 
CASK                  0.034   calcium/calmodulin-dependent serine protein kinase ...
GRID2IP               0.031   glutamate receptor, ionotropic, delta 2 (Grid2) int...
GRIP2                 0.031   glutamate receptor interacting protein 2 
MPP7                  0.031   palmitoylated membrane protein 7 
PPP1R9A               0.029   protein phosphatase 1, regulatory (inhibitor) subuni...
CASK                  0.029   calcium/calmodulin-dependent serine protein kinase ...
CASK                  0.029   calcium/calmodulin-dependent serine protein kinase ...
INADL                 0.029   InaD-like 
RIMS2                 0.027   regulating synaptic membrane exocytosis 2 isoform a...
RIMS2                 0.027   regulating synaptic membrane exocytosis 2 isoform b...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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