Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5031669
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5031669 cyclin-dependent kinase 2 associated protein 2 [Homo
sapiens]
(126 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5031669 cyclin-dependent kinase 2 associated protein 2 [Homo ... 258 1e-69
gi|239743776 PREDICTED: hypothetical protein XP_002344295 [Homo ... 186 4e-48
gi|4758188 CDK2-associated protein 1 [Homo sapiens] 127 3e-30
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 46 7e-06
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 44 4e-05
gi|83367077 mucin 16 [Homo sapiens] 41 2e-04
gi|238776840 patatin-like phospholipase domain containing 1 isof... 40 6e-04
gi|224589138 patatin-like phospholipase domain containing 1 isof... 40 6e-04
gi|224593249 patatin-like phospholipase domain containing 1 isof... 40 6e-04
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 39 8e-04
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho... 39 8e-04
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 39 8e-04
gi|4557317 annexin A11 [Homo sapiens] 38 0.002
gi|22165433 annexin A11 [Homo sapiens] 38 0.002
gi|22165431 annexin A11 [Homo sapiens] 38 0.002
gi|19923748 dihydrolipoamide S-succinyltransferase (E2 component... 37 0.003
gi|116284392 mucin 2 precursor [Homo sapiens] 37 0.005
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 37 0.005
gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo ... 36 0.007
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 36 0.007
gi|21314684 single stranded DNA binding protein 3 isoform b [Hom... 36 0.007
gi|157168329 formin 1 [Homo sapiens] 36 0.009
gi|11415052 retinoid X receptor, beta [Homo sapiens] 36 0.009
gi|194097341 period 1 [Homo sapiens] 35 0.012
gi|46560555 transmembrane protein 132E [Homo sapiens] 35 0.012
gi|112421108 capicua homolog [Homo sapiens] 35 0.012
gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens] 35 0.015
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 35 0.015
gi|163965366 nascent polypeptide-associated complex alpha subuni... 35 0.015
gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] 35 0.020
>gi|5031669 cyclin-dependent kinase 2 associated protein 2 [Homo
sapiens]
Length = 126
Score = 258 bits (658), Expect = 1e-69
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ
Sbjct: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
Query: 61 AMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAET 120
AMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAET
Sbjct: 61 AMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAET 120
Query: 121 ERNART 126
ERNART
Sbjct: 121 ERNART 126
>gi|239743776 PREDICTED: hypothetical protein XP_002344295 [Homo
sapiens]
Length = 109
Score = 186 bits (472), Expect = 4e-48
Identities = 91/108 (84%), Positives = 95/108 (87%)
Query: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
MSYKP PAPSSTPG STPGPGTPVPTGSVPSPSGS PGA AP RPLF DFGPP++G +Q
Sbjct: 1 MSYKPTTPAPSSTPGFSTPGPGTPVPTGSVPSPSGSGPGATAPCRPLFKDFGPPTVGCMQ 60
Query: 61 AMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIH 108
AMKPPGAQGSQSTYT+LL V EMGK IRPTYAGSKSA ERLKRGIIH
Sbjct: 61 AMKPPGAQGSQSTYTELLLVTGEMGKGIRPTYAGSKSAAERLKRGIIH 108
>gi|4758188 CDK2-associated protein 1 [Homo sapiens]
Length = 115
Score = 127 bits (318), Expect = 3e-30
Identities = 72/126 (57%), Positives = 85/126 (67%), Gaps = 11/126 (8%)
Query: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
MSYKP A + GSV SPS S+ + +R L +D+GPPS+GY Q
Sbjct: 1 MSYKPNLAAHMPAAALNA--------AGSVHSPSTSM-ATSSQYRQLLSDYGPPSLGYTQ 51
Query: 61 AMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALVRECLAET 120
+Q QS Y +LL++IEE+GKEIRPTYAGSKSAMERLKRGIIHAR LVRECLAET
Sbjct: 52 GTG--NSQVPQSKYAELLAIIEELGKEIRPTYAGSKSAMERLKRGIIHARGLVRECLAET 109
Query: 121 ERNART 126
ERNAR+
Sbjct: 110 ERNARS 115
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 46.2 bits (108), Expect = 7e-06
Identities = 28/64 (43%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 5 PIAPAPSSTPGS-STPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMK 63
P P PSS PGS P P P+P G +P P +P G P P GPP +G + M
Sbjct: 536 PGGPFPSSVPGSLLPPPPPPPLPGGMLPPPPPPLPPGGPPPPP-----GPPPLGAI--MP 588
Query: 64 PPGA 67
PPGA
Sbjct: 589 PPGA 592
Score = 27.3 bits (59), Expect = 3.2
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 8 PAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPG 39
P P PG P PG P P G++ P G+ G
Sbjct: 565 PPPPLPPGGPPPPPG-PPPLGAIMPPPGAPMG 595
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 43.5 bits (101), Expect = 4e-05
Identities = 32/76 (42%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 5 PIAPA--PSSTPGSSTPG--PGTPVPTGSVPS--PSGSVPGAGAPFRPLFNDFGPPSMGY 58
P AP+ PS P S+TP P P PTG PS P+G PG APF P PP Y
Sbjct: 43 PSAPSSVPSGLPPSATPSTVPFGPAPTGMYPSVPPTGPPPGPPAPFPPSGPSCPPPGGPY 102
Query: 59 VQAMKP-PGAQGSQST 73
P PG G T
Sbjct: 103 PAPTVPGPGPTGPYPT 118
Score = 41.2 bits (95), Expect = 2e-04
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Query: 5 PIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKP 64
P AP P S P PG P PT P P+G P PF L +G P+ A P
Sbjct: 84 PPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPT--DPAAAGP 141
Query: 65 PGAQGSQST 73
G GS S+
Sbjct: 142 LGPWGSMSS 150
Score = 32.7 bits (73), Expect = 0.075
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 14/63 (22%)
Query: 7 APAPSSTPGSSTPGP-GT------------PVPTGSVPSPSGSVPGAGAPFRPLFNDFGP 53
AP P PG++ P P GT P PTGS P+P G P PF+ G
Sbjct: 176 APPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTP-GLYPTPSNPFQVPSGPSGA 234
Query: 54 PSM 56
P M
Sbjct: 235 PPM 237
Score = 32.3 bits (72), Expect = 0.098
Identities = 20/67 (29%), Positives = 27/67 (40%), Gaps = 11/67 (16%)
Query: 5 PIAPAPSSTPGSSTP----GPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
P P PG P GP P P G P+P+ PG P + P+M + +
Sbjct: 73 PSVPPTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGP-------YPTPNMPFPE 125
Query: 61 AMKPPGA 67
+P GA
Sbjct: 126 LPRPYGA 132
Score = 32.3 bits (72), Expect = 0.098
Identities = 26/74 (35%), Positives = 30/74 (40%), Gaps = 8/74 (10%)
Query: 5 PIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAG---APFRPLFNDFGPP-SMGYVQ 60
P A P GS + GP P G P+P+ P G AP P PP G V
Sbjct: 136 PAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTV- 194
Query: 61 AMKPPGAQGSQSTY 74
PPGA G + Y
Sbjct: 195 ---PPGAWGPPAPY 205
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 41.2 bits (95), Expect = 2e-04
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 9 APSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQ 68
AP+STPG+ST GT S+PSP+ +VP P +F ++ Y + M+ PG++
Sbjct: 12979 APTSTPGTSTVDLGTSGTPSSLPSPTTAVP----LLVPFTLNFTITNLQYGEDMRHPGSR 13034
Query: 69 GSQSTYTDLLSVIEEMGK--EIRPTYAGSK 96
+T L ++ + K + P Y+G +
Sbjct: 13035 KFNTTERVLQGLLGPLFKNSSVGPLYSGCR 13064
Score = 38.9 bits (89), Expect = 0.001
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 8 PAP-SSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPG 66
P P SSTPG+ST G+ P+ S+PSP+ AG P +F ++ Y + M PG
Sbjct: 12666 PVPTSSTPGTSTVDLGSGTPS-SLPSPT----TAGPLLVPFTLNFTITNLKYEEDMHCPG 12720
Query: 67 AQGSQSTYTDLLSVIEEMGK--EIRPTYAGSKSAMERLKR 104
++ +T L S++ M K + P Y+G + + R ++
Sbjct: 12721 SRKFNTTERVLQSLLGPMFKNTSVGPLYSGCRLTLLRSEK 12760
Score = 33.9 bits (76), Expect = 0.034
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 11 SSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQGS 70
+STPG+ST GT S+PSP+ AG P +F ++ Y + M PG++
Sbjct: 12825 TSTPGTSTVDLGTSGTPSSLPSPT----SAGPLLVPFTLNFTITNLQYEEDMHHPGSRKF 12880
Query: 71 QSTYTDLLSVIEEMGK--EIRPTYAGSKSAMER 101
+T L ++ M K + Y+G + + R
Sbjct: 12881 NTTERVLQGLLGPMFKNTSVGLLYSGCRLTLLR 12913
Score = 33.5 bits (75), Expect = 0.044
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 11 SSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQGS 70
+STPG+ST GT S PSP+ AG P +F ++ Y + M+ G++
Sbjct: 12200 TSTPGTSTVDVGTSGTPSSSPSPT----TAGPLLMPFTLNFTITNLQYEEDMRRTGSRKF 12255
Query: 71 QSTYTDLLSVIEEMGK--EIRPTYAGSKSAMER 101
+ + L +++ + K + P Y+G + + R
Sbjct: 12256 NTMESVLQGLLKPLFKNTSVGPLYSGCRLTLLR 12288
Score = 32.7 bits (73), Expect = 0.075
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 11 SSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFN-DFGPPSMGYVQAMKPPGAQG 69
SSTPG+ST GT S+PSP+ P LF +F ++ Y + M PG++
Sbjct: 12514 SSTPGTSTVDLGTSGTPFSLPSPA-----TAGPLLVLFTLNFTITNLKYEEDMHRPGSRK 12568
Query: 70 SQSTYTDLLSVIEEMGK--EIRPTYAGSKSAMERLKR 104
+T L +++ M K + Y+G + + R ++
Sbjct: 12569 FNTTERVLQTLLGPMFKNTSVGLLYSGCRLTLLRSEK 12605
Score = 32.3 bits (72), Expect = 0.098
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 11 SSTPGSSTPGPGTPVP-TGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQG 69
SS P +STPG T P T PS G P +F ++ Y + M+ PG++
Sbjct: 13288 SSVPTTSTPGTFTVQPETSETPSSLPGPTATGPVLLPFTLNFTITNLQYEEDMRRPGSRK 13347
Query: 70 SQSTYTDLLSVIEEMGK--EIRPTYAGSKSAMER 101
+T L ++ + K + Y+G + + R
Sbjct: 13348 FNTTERVLQGLLMPLFKNTSVSSLYSGCRLTLLR 13381
Score = 31.6 bits (70), Expect = 0.17
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 11 SSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQGS 70
+STP +ST GT VPSP+ + G P +F ++ Y + M PG++
Sbjct: 13137 TSTPWTSTVDLGTSGTPSPVPSPTTT----GPLLVPFTLNFTITNLQYEENMGHPGSRKF 13192
Query: 71 QSTYTDLLSVIEEMGK--EIRPTYAGSKSAMERLKRGIIHAR 110
T + L +++ + K + P Y+G + + R ++ + R
Sbjct: 13193 NITESVLQGLLKPLFKSTSVGPLYSGCRLTLLRPEKDGVATR 13234
Score = 31.6 bits (70), Expect = 0.17
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 8/94 (8%)
Query: 11 SSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFN-DFGPPSMGYVQAMKPPGAQG 69
+S PG+ T GT S P PS A +P LF +F ++ Y + M+ PG++
Sbjct: 13605 TSIPGTPTVDLGTSGTPVSKPGPS-----AASPLLVLFTLNFTITNLRYEENMQHPGSRK 13659
Query: 70 SQSTYTDLLSVIEEMGK--EIRPTYAGSKSAMER 101
+T L ++ + K + P Y+G + + R
Sbjct: 13660 FNTTERVLQGLLRSLFKSTSVGPLYSGCRLTLLR 13693
Score = 30.4 bits (67), Expect = 0.37
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 13 TPGSSTPGPGTPVP---TGSVPSPSGSVPGAGAPFR-PLFNDFGPPSMGYVQAMKPPGAQ 68
TP +STP T P T S+PS + A PF P +F ++ Y + M+ PG++
Sbjct: 12042 TPATSTPVTSTFSPGISTSSIPSST----AATVPFMVPFTLNFTITNLQYEEDMRHPGSR 12097
Query: 69 GSQSTYTDLLSVIEEM--GKEIRPTYAGSKSAMER 101
+T +L +++ + + Y+G + A R
Sbjct: 12098 KFNATERELQGLLKPLFRNSSLEYLYSGCRLASLR 12132
>gi|238776840 patatin-like phospholipase domain containing 1 isoform
3 [Homo sapiens]
Length = 532
Score = 39.7 bits (91), Expect = 6e-04
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGP---PSMG 57
+S+ + PSSTPGSS P TP P S SP V +G+P R L + PS+G
Sbjct: 372 VSFPAVHKPPSSTPGSSLP---TPPPGLSPLSPQQQVQPSGSPARSLHSQAPTSPRPSLG 428
Query: 58 YVQAMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALV 113
P S + +EE+G+E A S+ + ++H + V
Sbjct: 429 PSTVGAPQTLPRSSLSAFPAQPPVEELGQEQPQAVALLVSSKPKSAVPLVHVKETV 484
>gi|224589138 patatin-like phospholipase domain containing 1 isoform
2 [Homo sapiens]
Length = 446
Score = 39.7 bits (91), Expect = 6e-04
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGP---PSMG 57
+S+ + PSSTPGSS P TP P S SP V +G+P R L + PS+G
Sbjct: 286 VSFPAVHKPPSSTPGSSLP---TPPPGLSPLSPQQQVQPSGSPARSLHSQAPTSPRPSLG 342
Query: 58 YVQAMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALV 113
P S + +EE+G+E A S+ + ++H + V
Sbjct: 343 PSTVGAPQTLPRSSLSAFPAQPPVEELGQEQPQAVALLVSSKPKSAVPLVHVKETV 398
>gi|224593249 patatin-like phospholipase domain containing 1 isoform
1 [Homo sapiens]
Length = 437
Score = 39.7 bits (91), Expect = 6e-04
Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 1 MSYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGP---PSMG 57
+S+ + PSSTPGSS P TP P S SP V +G+P R L + PS+G
Sbjct: 277 VSFPAVHKPPSSTPGSSLP---TPPPGLSPLSPQQQVQPSGSPARSLHSQAPTSPRPSLG 333
Query: 58 YVQAMKPPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAMERLKRGIIHARALV 113
P S + +EE+G+E A S+ + ++H + V
Sbjct: 334 PSTVGAPQTLPRSSLSAFPAQPPVEELGQEQPQAVALLVSSKPKSAVPLVHVKETV 389
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 39.3 bits (90), Expect = 8e-04
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 15 GSSTPGP-GTPVPTG--SVPSPSG-SVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQG 69
GSS PGP G P P G +P P G S+ G P P GPP +GY PPG G
Sbjct: 1349 GSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQ----GPPGIGYEGRQGPPGPPG 1403
Score = 32.0 bits (71), Expect = 0.13
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 5 PIAPA-PSSTP--GSSTPGPGTPVPT---------GSVPSPSGSVPGAGAPFRPLFNDFG 52
P+A A PSSTP +T P +P+ G++P+P+ S P G P+ PL
Sbjct: 151 PLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGRPWAPLTGPSV 210
Query: 53 PP 54
PP
Sbjct: 211 PP 212
>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
sapiens]
Length = 1336
Score = 39.3 bits (90), Expect = 8e-04
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 15 GSSTPGP-GTPVPTG--SVPSPSG-SVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQG 69
GSS PGP G P P G +P P G S+ G P P GPP +GY PPG G
Sbjct: 934 GSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQ----GPPGIGYEGRQGPPGPPG 988
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 39.3 bits (90), Expect = 8e-04
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Query: 15 GSSTPGP-GTPVPTG--SVPSPSG-SVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGAQG 69
GSS PGP G P P G +P P G S+ G P P GPP +GY PPG G
Sbjct: 1114 GSSLPGPPGPPGPRGYPGIPGPKGESIRGQPGPPGPQ----GPPGIGYEGRQGPPGPPG 1168
Score = 33.9 bits (76), Expect = 0.034
Identities = 30/92 (32%), Positives = 42/92 (45%), Gaps = 22/92 (23%)
Query: 5 PIAPA-PSSTP--GSSTPGPGTPVPT---------GSVPSPSGSVPGAGAPFRPLFNDFG 52
P+A A PSSTP +T P +P+ G++P+P+ S P G P+ PL
Sbjct: 151 PLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGRPWAPLTGPSV 210
Query: 53 PP--------SMGYVQAMKPPGAQGSQSTYTD 76
PP +G +Q + P Q Q T TD
Sbjct: 211 PPPSSERISEEVGLLQLLGDPPPQ--QVTQTD 240
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/91 (34%), Positives = 33/91 (36%), Gaps = 17/91 (18%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGA----------GAPFRPLFNDFG 52
Y P P S S P PG PVP +P P PGA G P PL
Sbjct: 106 YPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLPGQQQ 165
Query: 53 P-------PSMGYVQAMKPPGAQGSQSTYTD 76
P P G V PP GS+ T TD
Sbjct: 166 PVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/91 (34%), Positives = 33/91 (36%), Gaps = 17/91 (18%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGA----------GAPFRPLFNDFG 52
Y P P S S P PG PVP +P P PGA G P PL
Sbjct: 106 YPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLPGQQQ 165
Query: 53 P-------PSMGYVQAMKPPGAQGSQSTYTD 76
P P G V PP GS+ T TD
Sbjct: 166 PVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 38.1 bits (87), Expect = 0.002
Identities = 31/91 (34%), Positives = 33/91 (36%), Gaps = 17/91 (18%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGA----------GAPFRPLFNDFG 52
Y P P S S P PG PVP +P P PGA G P PL
Sbjct: 106 YPPPGGNPPSRMPSYPPYPGAPVPGQPMPPPGQQPPGAYPGQPPVTYPGQPPVPLPGQQQ 165
Query: 53 P-------PSMGYVQAMKPPGAQGSQSTYTD 76
P P G V PP GS+ T TD
Sbjct: 166 PVPSYPGYPGSGTVTPAVPPTQFGSRGTITD 196
>gi|19923748 dihydrolipoamide S-succinyltransferase (E2 component of
2-oxo-glutarate complex) [Homo sapiens]
Length = 453
Score = 37.4 bits (85), Expect = 0.003
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 5 PIAPAPSSTP-GSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPP 54
P A AP + P ++ P P P+PT P PS S P +G P + PP
Sbjct: 159 PAAAAPKAEPTAAAVPPPAAPIPTQMPPVPSPSQPPSGKPVSAVKPTVAPP 209
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 36.6 bits (83), Expect = 0.005
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 5 PIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPP 54
P P+P+ TP STP P P T S P+P G+ P P DF PP
Sbjct: 4377 PSTPSPTPTPSKSTPTPSKPSSTPSKPTP-GTKP-------PECPDFDPP 4418
Score = 29.3 bits (64), Expect = 0.83
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 5 PIAPAPSST--PGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPP 54
PI P S+T P ++TP P T P+ + S P P P+ PP
Sbjct: 1625 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPITTTTTPP 1676
Score = 28.9 bits (63), Expect = 1.1
Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 5 PIAPAPSST--PGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPP 54
PI P S+T P ++TP P T P+ + S P P P PP
Sbjct: 1546 PITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITTTTPP 1597
Score = 28.1 bits (61), Expect = 1.8
Identities = 15/49 (30%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 8 PAPSSTPGSSTPGPGTPVPTGSVPSPSGSV-PGAGAPFRPLFNDFGPPS 55
P P++TP T P P T S P+ + + P P P PP+
Sbjct: 1464 PPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPA 1512
Score = 26.9 bits (58), Expect = 4.1
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 8 PAPSSTPGSSTPGPGTPVPTGSVPSPSGSVP 38
P P++TP T TP PT + PSP + P
Sbjct: 1596 PPPTTTPSPPTTTTTTPPPT-TTPSPPTTTP 1625
Score = 26.6 bits (57), Expect = 5.4
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 5 PIAPAPSSTPGSSTPGPGTPVPTGSVPSPS 34
P +P ++T SST P P T + PSP+
Sbjct: 1705 PSSPITTTTTPSSTTTPSPPPTTMTTPSPT 1734
Score = 26.6 bits (57), Expect = 5.4
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 6 IAPAPSSTPGS-STPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKP 64
++P PS+T TP GT + S P+PS + + P PS+ ++P
Sbjct: 4268 LSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTGLRP 4327
Score = 26.2 bits (56), Expect = 7.0
Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 9/80 (11%)
Query: 5 PIAPAPSSTPGSSTPGPGT-------PVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMG 57
P P + +P ++TP P T P T S P+ + P A P PP+
Sbjct: 1470 PSPPTTTPSPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTT- 1528
Query: 58 YVQAMKPPGAQGSQSTYTDL 77
PP S T T +
Sbjct: 1529 -TTTTPPPTTTPSPPTTTPI 1547
Score = 26.2 bits (56), Expect = 7.0
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 12/78 (15%)
Query: 8 PAPSSTPGSSTPGPGTP------VPTGSVPSP----SGSVPGAGAPFRPLFNDFGPPSMG 57
P P++TP T P TP +P + PSP + + P P P PP++
Sbjct: 1533 PPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTI- 1591
Query: 58 YVQAMKPPGAQGSQSTYT 75
PP S T T
Sbjct: 1592 -TTTTPPPTTTPSPPTTT 1608
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 36.6 bits (83), Expect = 0.005
Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 5 PIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPP 54
P P+P+ TP STP P P T S P+P G+ P P DF PP
Sbjct: 1837 PSTPSPTPTPSKSTPTPSKPSSTPSKPTP-GTKP-------PECPDFDPP 1878
Score = 26.6 bits (57), Expect = 5.4
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 6 IAPAPSSTPGS-STPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKP 64
++P PS+T TP GT + S P+PS + + P PS+ ++P
Sbjct: 1728 LSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTTSAWTPTPTPLSTPSIIRTTGLRP 1787
Score = 26.2 bits (56), Expect = 7.0
Identities = 22/86 (25%), Positives = 34/86 (39%), Gaps = 9/86 (10%)
Query: 6 IAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPP 65
+ P P+ T G+ TP P TP+ T + +P+ + G P P P
Sbjct: 1529 VTPTPTPT-GTQTPTP-TPISTTTTVTPTPTPTGTQTPTT-------TPITTTTTVTPTP 1579
Query: 66 GAQGSQSTYTDLLSVIEEMGKEIRPT 91
G+Q+ T L++ M PT
Sbjct: 1580 TPTGTQTPTTVLITTTTTMTPTPTPT 1605
>gi|239743232 PREDICTED: hypothetical protein XP_002342775 [Homo
sapiens]
Length = 834
Score = 36.2 bits (82), Expect = 0.007
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGS----VPGAGAP-FRPLFNDFGPPS 55
+KPI AP P S GP P P+ S +PS S AP F+P+F+ GPP+
Sbjct: 312 FKPIFTAP---PKSEKEGPTPPGPSVSATAPSSSSLPTTTSTTAPTFQPVFSSMGPPA 366
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 36.2 bits (82), Expect = 0.007
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 8 PAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGA 67
PAPSS S +P P + P+ P P + P AP +++ F P +A PP A
Sbjct: 188 PAPSSASSSPSPSPSSSSPSPPPPPPPPAPPAPPAPRFDIYDPFHPTD----EAYSPPPA 243
Score = 30.0 bits (66), Expect = 0.49
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 7 APAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGP 53
AP P+ + SS+P P +P + P P P AP P F+ + P
Sbjct: 185 APPPAPSSASSSPSP-SPSSSSPSPPPPPPPPAPPAPPAPRFDIYDP 230
Score = 25.8 bits (55), Expect = 9.2
Identities = 9/18 (50%), Positives = 11/18 (61%)
Query: 7 APAPSSTPGSSTPGPGTP 24
+P P + P TP PGTP
Sbjct: 319 SPRPDAQPTQPTPAPGTP 336
>gi|21314684 single stranded DNA binding protein 3 isoform b [Homo
sapiens]
Length = 368
Score = 36.2 bits (82), Expect = 0.007
Identities = 29/96 (30%), Positives = 36/96 (37%), Gaps = 10/96 (10%)
Query: 7 APAPSSTPGSSTPG---PGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMK 63
A APS G+ P PG P+P G P GS P A P P SM +
Sbjct: 95 AAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPP----HNPSSMMGPHSQP 150
Query: 64 PPGAQGSQSTYTDLLSVIEEMGKEIRPTYAGSKSAM 99
P G G+Q + + + G P GS M
Sbjct: 151 PGGVPGTQPLLPNSMDPTRQQG---HPNMGGSMQRM 183
Score = 25.8 bits (55), Expect = 9.2
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 8 PAPSSTPGS--STPGPGTPVPTGSVPSPSGS 36
P SS+PG+ PG G P T +PSP+ S
Sbjct: 237 PYSSSSPGTYVGPPGGGGPPGTPIMPSPADS 267
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 35.8 bits (81), Expect = 0.009
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 6 IAPAPSSTPGSSTPG-PGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKP 64
++PAP P S+ P P P P +P PS + P P PL N PP+ G P
Sbjct: 665 LSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPP 724
Query: 65 P 65
P
Sbjct: 725 P 725
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Query: 5 PIAPAPSSTPGSSTPGPGTPVPTGSVP-SPSGSVPGAGAPFRPLFNDFGPPSMG 57
P P P P S+ GP P P +P SP+ PG P P PP G
Sbjct: 682 PPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPPG 735
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 35.8 bits (81), Expect = 0.009
Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 10/73 (13%)
Query: 8 PAPSSTPGSSTPGPGTPVPT-------GSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
P P P S PGP P T G+ P P P G+PF + + G P +
Sbjct: 90 PLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLGSPFPVISSSMGSPGL---P 146
Query: 61 AMKPPGAQGSQST 73
PPG G S+
Sbjct: 147 PPAPPGFSGPVSS 159
Score = 26.6 bits (57), Expect = 5.4
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 11 SSTPGSSTPGP---GTPVPTG-SVPSPSGSVPGAGAPFRPLFNDFGPPSMG 57
S +P SS+P P G P P+ P P + P G P PP +G
Sbjct: 80 SRSPDSSSPNPLPQGVPPPSPPGPPLPPSTAPSLGGSGAPPPPPMPPPPLG 130
>gi|194097341 period 1 [Homo sapiens]
Length = 1290
Score = 35.4 bits (80), Expect = 0.012
Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 7/70 (10%)
Query: 8 PAPSSTPGSS--TPGPGTPVPTGSVPSPSGSVPGAGAPFR---PLFND--FGPPSMGYVQ 60
P PSS P + TP G P P PSPS P R PLFN P + +Q
Sbjct: 929 PTPSSYPYGALQTPAEGPPTPASHSPSPSLPALAPSPPHRPDSPLFNSRCSSPLQLNLLQ 988
Query: 61 AMKPPGAQGS 70
+ P A+G+
Sbjct: 989 LEELPRAEGA 998
>gi|46560555 transmembrane protein 132E [Homo sapiens]
Length = 984
Score = 35.4 bits (80), Expect = 0.012
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Query: 14 PGSSTPGPG--------TPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ 60
PG S PGPG P ++P+P PG +P P DF P G++Q
Sbjct: 735 PGPSQPGPGGGEDEARGAGPPGSALPAPEAPGPGTASPVVPPTEDFLPLPTGFLQ 789
Score = 26.2 bits (56), Expect = 7.0
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 12/40 (30%)
Query: 8 PAPSSTPGSSTPGPGT------------PVPTGSVPSPSG 35
P S+ P PGPGT P+PTG + P G
Sbjct: 754 PPGSALPAPEAPGPGTASPVVPPTEDFLPLPTGFLQVPRG 793
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 35.4 bits (80), Expect = 0.012
Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 13/70 (18%)
Query: 6 IAPAPSSTPGSSTPGPGTPVPTGSV-------PSPSGSVPGAGAPFRPLFNDFGPPSMGY 58
+APAP+ PG+ P P PT S+ S +G V A AP G P +
Sbjct: 838 VAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTP------GIPILQS 891
Query: 59 VQAMKPPGAQ 68
V + PP AQ
Sbjct: 892 VPSAPPPKAQ 901
Score = 29.3 bits (64), Expect = 0.83
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 17/80 (21%)
Query: 10 PSSTPGSS---TPGPGTPVPTGSVPSPSGSVP-----GAGAPFRPLFND---------FG 52
P PG++ +PGPG P P G V S G P +G P P + F
Sbjct: 94 PERPPGATCPESPGPGPPHPLGVVESGKGPPPTTEEEASGPPGEPRLDSETESDHDDAFL 153
Query: 53 PPSMGYVQAMKPPGAQGSQS 72
+Q PPG + +QS
Sbjct: 154 SIMSPEIQLPLPPGKRRTQS 173
Score = 27.3 bits (59), Expect = 3.2
Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 5 PIAPAPSSTPGSSTPG-PGTPVPTGSVPSPSGSVPG 39
P+ P P S PG PG G P P+ P PS + G
Sbjct: 1574 PLPPPPESGPGQ--PGWEGAPQPSPPPPGPSTAATG 1607
Score = 26.9 bits (58), Expect = 4.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 9 APSSTPGSSTPGP-GTPVPTGSVPSPSGSVPGAGA 42
A S+TP ++T P G P P + P+P+ P A A
Sbjct: 1123 ATSTTPPAATILPKGPPAPATATPAPTSPFPSATA 1157
Score = 25.8 bits (55), Expect = 9.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 14 PGSSTPGPGTPVPTGSVPSPSGSVPGAGAP 43
PG+ P P P PTG+ +P+ + AG P
Sbjct: 1529 PGAEAPLP-VPPPTGTAAAPAPTPSPAGGP 1557
>gi|150378545 POM121 membrane glycoprotein (rat)-like [Homo sapiens]
Length = 987
Score = 35.0 bits (79), Expect = 0.015
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGS----VPGAGAP-FRPLFNDFGPPS 55
+KPI AP P S GP P P+ + +PS S AP F+P+F+ GPP+
Sbjct: 463 FKPIFTAP---PKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPA 517
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 35.0 bits (79), Expect = 0.015
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGS----VPGAGAP-FRPLFNDFGPPS 55
+KPI AP P S GP P P+ + +PS S AP F+P+F+ GPP+
Sbjct: 463 FKPIFTAP---PKSEKEGPTPPGPSVTATAPSSSSLPTTTSTTAPTFQPVFSSMGPPA 517
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 35.0 bits (79), Expect = 0.015
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 6/62 (9%)
Query: 10 PSSTPGSSTPGPGTPVPTGSVPSPSGSVPG-AGAPFRPLFNDFGPPSMGYVQAMKPPGAQ 68
P++TP S GP TP P G+ P+ + P G P P P A+ PP +
Sbjct: 966 PAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATP-----SPKGAPTPPAVTPPSPK 1020
Query: 69 GS 70
GS
Sbjct: 1021 GS 1022
Score = 34.7 bits (78), Expect = 0.020
Identities = 27/74 (36%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 2 SYKPIAPAPSSTPGSSTPGPGTPVPTG-------SVPSPSGSV---PGAGAPFRPLFNDF 51
S K P++TP S GP TP P G + PSP G + P GAP P
Sbjct: 1075 SLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAAT-- 1132
Query: 52 GPPSMGYVQAMKPP 65
PPS A PP
Sbjct: 1133 -PPSPKGGLATPPP 1145
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Query: 5 PIAPAP--SSTPGSSTP-----GPGTPVPTGSVPSPSGSVPG-AGAPFRPLFNDFGPPSM 56
P P+P + TP ++TP GP TP P G+ P+ + P G+P F P
Sbjct: 977 PATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPF----PKGA 1032
Query: 57 GYVQAMKPPGAQGS 70
A PP +GS
Sbjct: 1033 STPPAATPPSPKGS 1046
Score = 31.6 bits (70), Expect = 0.17
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Query: 8 PAPSSTPGSSTPGPGTPVPTGSVPSPSGS---VPGAGAPFRPLFNDFGPPSMGYVQAMKP 64
P+P P +S P P + PSP GS P GAP P P + A P
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTP 1354
Query: 65 PGAQG 69
G
Sbjct: 1355 SSKGG 1359
Score = 31.6 bits (70), Expect = 0.17
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Query: 10 PSSTPGSSTPGPGTPVPTGSVPSPSGSVPG-AGAPFRPL---FNDFGPPSMGYVQAMKPP 65
P++TP S PGTP P G+ P+ + P G P P + GP + + PP
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPP 1372
Query: 66 GAQGS 70
A S
Sbjct: 1373 AATPS 1377
Score = 31.2 bits (69), Expect = 0.22
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 4 KPIAPAPSSTPGSSTPGPG-TPVPTGSVPSPSGSVPG-AGAPFRPLFNDFGPPSMGYVQA 61
K + P++TP S P TP+P G+ +P+ ++P G P P P A
Sbjct: 1030 KGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTP-----PA 1084
Query: 62 MKPPGAQGSQST 73
PP +G +T
Sbjct: 1085 ATPPSPKGGPAT 1096
Score = 30.8 bits (68), Expect = 0.29
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 13/77 (16%)
Query: 5 PIAPAP--SSTPGSSTP-----GPGTPVPTGSVPSPSGSVPG-AGAPFRPLFNDFGPPSM 56
P +P+P + TP ++TP GP TP P + P+ + P G P P P
Sbjct: 931 PASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATP-----SPKGA 985
Query: 57 GYVQAMKPPGAQGSQST 73
A PP +G +T
Sbjct: 986 PTPPAATPPSPKGGPAT 1002
Score = 30.8 bits (68), Expect = 0.29
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 14/76 (18%)
Query: 3 YKPIAPAPSSTPGSSTPGPGTPVPTG-------SVPSPSGSV---PGAGAPFRPLFNDFG 52
+K P++TP S G TP P G + PSP G + P GAP P
Sbjct: 1122 HKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAAT--- 1178
Query: 53 PPS-MGYVQAMKPPGA 67
PPS G + P GA
Sbjct: 1179 PPSPKGGLATPSPKGA 1194
Score = 30.8 bits (68), Expect = 0.29
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 2 SYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQ- 60
S K P++TP S GP TP P G+ P+ + P PP G
Sbjct: 1236 SPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLAT------PPHKGAPNP 1289
Query: 61 -AMKPPGAQGSQST 73
+ PP +G +T
Sbjct: 1290 AVVTPPSPKGGPAT 1303
Score = 30.4 bits (67), Expect = 0.37
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 5 PIAPAPSSTPGSSTPGP-GTPV-PTGSVPSPSGSVPGAGAPFRPLFNDFGPPS-MGYVQA 61
P A PS G +TP P G P P + PSP G + P PPS G +
Sbjct: 1175 PAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 62 MKPPGA 67
P GA
Sbjct: 1235 PSPKGA 1240
Score = 29.6 bits (65), Expect = 0.64
Identities = 26/83 (31%), Positives = 31/83 (37%), Gaps = 14/83 (16%)
Query: 5 PIAPAPSSTPGSSTPG-PGTPVPTGSVP-SPSGS----------VPGAGAPFRPLFNDFG 52
P A PS G +TP G P P + P SP G +P A P P
Sbjct: 1060 PAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLAT 1119
Query: 53 PPSMG--YVQAMKPPGAQGSQST 73
PP G A PP +G +T
Sbjct: 1120 PPHKGAPTTPAATPPSPKGGLAT 1142
Score = 29.6 bits (65), Expect = 0.64
Identities = 23/66 (34%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 5 PIAPAPSSTPGSSTPGP-GTPV-PTGSVPSPSGSVPGAGAPFRPLFNDFGPPS-MGYVQA 61
P A PS G +TP P G P P + PSP G + P PPS G +
Sbjct: 1152 PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1211
Query: 62 MKPPGA 67
P GA
Sbjct: 1212 PSPKGA 1217
Score = 29.3 bits (64), Expect = 0.83
Identities = 24/64 (37%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 7 APAPSSTPGSSTPGPGTPVPTG--SVPSPSGS-VPGAGAPFRPLFNDFGPPSMGYVQAMK 63
APA S T S TP P G + PSP G+ P A P P GP + A
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSP---KGGPATPSPKWAPT 964
Query: 64 PPGA 67
PP A
Sbjct: 965 PPAA 968
Score = 29.3 bits (64), Expect = 0.83
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 2 SYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSP 33
S K P+ TP S GP TP P G+ SP
Sbjct: 1609 SPKEAPTPPAVTPPSPEKGPATPAPKGTPTSP 1640
Score = 28.9 bits (63), Expect = 1.1
Identities = 19/66 (28%), Positives = 24/66 (36%), Gaps = 11/66 (16%)
Query: 8 PAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPGA 67
PAP P S +P P + PSP G + P PP A PP
Sbjct: 925 PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPT-----PP------AATPPSP 973
Query: 68 QGSQST 73
+G +T
Sbjct: 974 KGGPAT 979
Score = 28.9 bits (63), Expect = 1.1
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 2 SYKPIAPAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPG----------AGAPFRPLFNDF 51
S K P++TP S G TP P G+ +P+ + P GAP P
Sbjct: 1190 SPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT-- 1247
Query: 52 GPPSMGYVQAMKPP 65
PPS A PP
Sbjct: 1248 -PPSPKGGPATPPP 1260
Score = 28.9 bits (63), Expect = 1.1
Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 15/73 (20%)
Query: 8 PAPSSTPGSSTP--GPGTPVPTGS------VPSPSGSVPGAG-------APFRPLFNDFG 52
PAP SS+P P TP P G+ +PS VP AP L +
Sbjct: 1479 PAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKT 1538
Query: 53 PPSMGYVQAMKPP 65
P ++ +A+ PP
Sbjct: 1539 PATLAPKEALIPP 1551
Score = 26.6 bits (57), Expect = 5.4
Identities = 21/70 (30%), Positives = 27/70 (38%), Gaps = 18/70 (25%)
Query: 10 PSSTPGSSTPGPGTPVPTGSVPSPSGSVP--------------GAGAPFRPLFNDFGPPS 55
P+ TP S GP P P G SP+ +P GA P + D PP+
Sbjct: 1382 PAMTPPSPKRGPAIPSPKGDPTSPA-VIPLSPKKAPATPVTREGAATPSK---GDLTPPA 1437
Query: 56 MGYVQAMKPP 65
+ V K P
Sbjct: 1438 VTPVSLKKAP 1447
>gi|239753500 PREDICTED: hypothetical protein [Homo sapiens]
Length = 213
Score = 34.7 bits (78), Expect = 0.020
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 7 APAPSSTPGSSTPGPGTPVPTGSVPSPSGSVPGAGAPFRPLFNDFGPPSMGYVQAMKPPG 66
+P+P S+P S P P P +P P+ P A P R +F S G + P G
Sbjct: 10 SPSPRSSPARSHPPAPLPFPE-RLPRPAAKEPAARTPARQVFP--AAASAGREGSAAPDG 66
Query: 67 AQGS 70
A+GS
Sbjct: 67 ARGS 70
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,895,021
Number of Sequences: 37866
Number of extensions: 487191
Number of successful extensions: 6403
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 626
Number of HSP's that attempted gapping in prelim test: 3746
Number of HSP's gapped (non-prelim): 2897
length of query: 126
length of database: 18,247,518
effective HSP length: 90
effective length of query: 36
effective length of database: 14,839,578
effective search space: 534224808
effective search space used: 534224808
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.