Guide to the Human Genome
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Name: CDK2AP1 Sequence: fasta or formatted (115aa) NCBI GI: 4758188
Description:

CDK2-associated protein 1

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.0         15           3
 C cysteine            0.9          1           1
 D aspartate           0.9          1           1
 E glutamate           7.0          8           2
 F phenylalanine       0.0          0           0
 G glycine             7.8          9           1
 H histidine           2.6          3           1
 I isoleucine          4.3          5           2
 K lysine              4.3          5           1
 L leucine             9.6         11           2
 M methionine          3.5          4           1
 N asparagine          3.5          4           1
 P proline             6.1          7           2
 Q glutamine           4.3          5           1
 R arginine            7.0          8           1
 S serine             12.2         14           2
 T threonine           5.2          6           1
 V valine              2.6          3           1
 W tryptophan          0.0          0           0
 Y tyrosine            5.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CDK2-associated protein  1 
CDK2AP2               0.502   cyclin-dependent kinase 2 associated protein 2 
LOC100289027          0.271   PREDICTED: hypothetical protein XP_002344295 
TRIP12                0.025   thyroid hormone receptor interactor 12 
ZXDB                  0.025   zinc finger, X-linked, duplicated B 
ZXDA                  0.025   zinc finger, X-linked, duplicated A 
PHLDB2                0.020   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.020   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.020   pleckstrin homology-like domain, family B, member 2...
PHLDB2                0.020   pleckstrin homology-like domain, family B, member 2 ...
CD68                  0.015   CD68 antigen isoform B 
CD68                  0.015   CD68 antigen isoform A 
PUM1                  0.010   pumilio 1 isoform 2 
PUM1                  0.010   pumilio 1 isoform 1 
MYH14                 0.010   myosin, heavy chain 14 isoform 1 
MYH14                 0.010   myosin, heavy chain 14 isoform 2 
MYH14                 0.010   myosin, heavy chain 14 isoform 3 
DTX2                  0.010   deltex 2 isoform b 
DTX2                  0.010   deltex 2 isoform a 
DTX2                  0.010   deltex 2 isoform a 
DTX2                  0.010   deltex 2 isoform a 
MYH15                 0.010   myosin, heavy polypeptide 15 
KRT12                 0.010   keratin 12 
DCTN2                 0.010   dynactin 2 
CCDC142               0.010   coiled-coil domain containing 142 
C2orf62               0.010   hypothetical protein LOC375307 
RYR1                  0.005   skeletal muscle ryanodine receptor isoform 2 
RYR1                  0.005   skeletal muscle ryanodine receptor isoform 1 
MAST4                 0.005   microtubule associated serine/threonine kinase famil...
TXNDC11               0.005   thioredoxin domain containing 11 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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