Guide to the Human Genome
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Name: CDK2AP2 Sequence: fasta or formatted (126aa) NCBI GI: 5031669
Description:

cyclin-dependent kinase 2 associated protein 2

Referenced in:

Cyclins and Related Functions

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         12           1
 C cysteine            0.8          1           1
 D aspartate           1.6          2           1
 E glutamate           5.6          7           2
 F phenylalanine       2.4          3           1
 G glycine            11.1         14           1
 H histidine           0.8          1           1
 I isoleucine          4.0          5           2
 K lysine              4.0          5           1
 L leucine             4.8          6           2
 M methionine          4.0          5           1
 N asparagine          1.6          2           1
 P proline            14.3         18           2
 Q glutamine           2.4          3           1
 R arginine            6.3          8           1
 S serine             11.9         15           2
 T threonine           7.1          9           1
 V valine              4.8          6           1
 W tryptophan          0.0          0           0
 Y tyrosine            3.2          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cyclin-dependent kinase 2 associated protein 2 
LOC100289027          0.691   PREDICTED: hypothetical protein XP_002344295 
CDK2AP1               0.438   CDK2-associated protein  1 
DAAM1                 0.090   dishevelled-associated activator of morphogenesis 1 ...
MAPK1IP1L             0.082   MAPK-interacting and spindle-stabilizing protein [Ho...
MUC16                 0.069   mucin 16 
PNPLA1                0.064   patatin-like phospholipase domain containing 1 isof...
PNPLA1                0.064   patatin-like phospholipase domain containing 1 isof...
PNPLA1                0.064   patatin-like phospholipase domain containing 1 isof...
COL18A1               0.060   alpha 1 type XVIII collagen isoform 3 precursor [Ho...
COL18A1               0.060   alpha 1 type XVIII collagen isoform 2 precursor [Ho...
COL18A1               0.060   alpha 1 type XVIII collagen isoform 1 precursor [Ho...
ANXA11                0.056   annexin A11 
ANXA11                0.056   annexin A11 
ANXA11                0.056   annexin A11 
DLST                  0.052   dihydrolipoamide S-succinyltransferase (E2 component...
MUC2                  0.052   mucin 2 precursor 
LOC100294420          0.052   PREDICTED: similar to mucin 2 
LOC100288540          0.047   PREDICTED: hypothetical protein XP_002342775 
SCAF1                 0.047   SR-related CTD-associated factor 1 
SSBP3                 0.047   single stranded DNA binding protein 3 isoform b [Hom...
FMN1                  0.047   formin 1 
RXRB                  0.047   retinoid X receptor, beta 
PER1                  0.043   period 1 
TMEM132E              0.043   transmembrane protein 132E 
CIC                   0.043   capicua homolog 
POM121C               0.043   POM121 membrane glycoprotein (rat)-like 
POM121                0.043   nuclear pore membrane protein 121 
NACA                  0.043   nascent polypeptide-associated complex alpha subuni...
LOC100293980          0.043   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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