Search of human proteins with 49227854

Search of human proteins with 49227854

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|49227854 mediator complex subunit 10 [Homo sapiens]
         (135 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|49227854 mediator complex subunit 10 [Homo sapiens]                273   4e-74
gi|4503865 gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...    30   0.59 
gi|13699824 kinesin family member 11 [Homo sapiens]                    29   1.0  
gi|109255234 centrosomal protein 290kDa [Homo sapiens]                 29   1.3  
gi|24497601 endothelial differentiation-related factor 1 isoform...    28   1.7  
gi|4503453 endothelial differentiation-related factor 1 isoform ...    28   1.7  
gi|221316624 dystonin isoform 4 [Homo sapiens]                         28   2.3  
gi|221316622 dystonin isoform 3 [Homo sapiens]                         28   2.3  
gi|221316618 dystonin isoform 2 [Homo sapiens]                         28   2.3  
gi|34577047 dystonin isoform 1 [Homo sapiens]                          28   2.3  
gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]              28   2.3  
gi|45269141 multimerin 1 [Homo sapiens]                                28   2.3  
gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]             28   2.9  
gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]        28   2.9  
gi|151101140 coiled-coil domain containing 2 isoform a [Homo sap...    28   2.9  
gi|151105223 coiled-coil domain containing 2 isoform a [Homo sap...    28   2.9  
gi|151105229 coiled-coil domain containing 2 isoform a [Homo sap...    28   2.9  
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo...    27   3.8  
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo...    27   3.8  
gi|4758650 kinesin family member 5C [Homo sapiens]                     27   5.0  
gi|226246554 hypothetical protein LOC643677 [Homo sapiens]             27   6.6  
gi|4504425 high-mobility group box 1 [Homo sapiens]                    27   6.6  
gi|4758648 kinesin family member 5B [Homo sapiens]                     27   6.6  
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap...    27   6.6  
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap...    27   6.6  
gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sap...    27   6.6  
gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]                  27   6.6  
gi|154146189 dedicator of cytokinesis 10 [Homo sapiens]                27   6.6  
gi|155030188 mediator complex subunit 7 [Homo sapiens]                 26   8.6  
gi|4758064 mediator complex subunit 7 [Homo sapiens]                   26   8.6  

>gi|49227854 mediator complex subunit 10 [Homo sapiens]
          Length = 135

 Score =  273 bits (697), Expect = 4e-74
 Identities = 135/135 (100%), Positives = 135/135 (100%)

Query: 1   MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD 60
           MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD
Sbjct: 1   MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD 60

Query: 61  ITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPED 120
           ITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPED
Sbjct: 61  ITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPED 120

Query: 121 MAKYRSIRGEDHPPS 135
           MAKYRSIRGEDHPPS
Sbjct: 121 MAKYRSIRGEDHPPS 135


>gi|4503865 gamma-aminobutyric acid (GABA) A receptor, beta 2
           isoform 2 [Homo sapiens]
          Length = 474

 Score = 30.0 bits (66), Expect = 0.59
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 70  YIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRG 129
           YI  GR PQ   K   + A A NE+++  ++ M   +++L+  L      +MA   ++ G
Sbjct: 328 YIFFGRGPQRQKKAAEKAASANNEKMRLDVNKMDPHENILLSTLE--IKNEMATSEAVMG 385

Query: 130 EDHPPS 135
              P S
Sbjct: 386 LGDPRS 391


>gi|13699824 kinesin family member 11 [Homo sapiens]
          Length = 1056

 Score = 29.3 bits (64), Expect = 1.0
 Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 13  EKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYID 72
           E+ VE I ++G +  +        LN+     +    ++D+C+  L + T  LE  +   
Sbjct: 417 EQIVELIEKIGAVEEE--------LNRVTELFMDNKNELDQCKSDLQNKTQELETTQKHL 468

Query: 73  QGRNPQLYTKECLERALAKNEQ 94
           Q    QL  +E +  AL   E+
Sbjct: 469 QETKLQLVKEEYITSALESTEE 490


>gi|109255234 centrosomal protein 290kDa [Homo sapiens]
          Length = 2479

 Score = 28.9 bits (63), Expect = 1.3
 Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 27/147 (18%)

Query: 4   KFDHLEEHLEKFVE----NIRQLGIIVSD-FQPSSQAGLNQKLNFIVTGLQDIDKCRQQL 58
           K DHLE+      +    N+   GI + D   PSS + +N +  +++  LQ+++   ++L
Sbjct: 739 KIDHLEKETSLLRQSEGSNVVFKGIDLPDGIAPSSASIINSQNEYLIHLLQELENKEKKL 798

Query: 59  HDITVPLEVF----------------EYIDQGRNPQLYTKECLERALAKNEQVKGKIDTM 102
            ++   LE +                EY+ +    +  +K   E      +QV+     +
Sbjct: 799 KNLEDSLEDYNRKFAVIRHQQSLLYKEYLSEKETWKTESKTIKEEKRKLEDQVQQDAIKV 858

Query: 103 KKFKSLL------IQELSKVFPEDMAK 123
           K++ +LL        E+ K+  E+  K
Sbjct: 859 KEYNNLLNALQMDSDEMKKILAENSRK 885


>gi|24497601 endothelial differentiation-related factor 1 isoform
           beta [Homo sapiens]
          Length = 139

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 35  AGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQ 94
           AG N K + I      +D+  ++LH   V LEV + I QGR  +  T++ L   + +  Q
Sbjct: 46  AGQN-KQHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQ 104

Query: 95  V 95
           V
Sbjct: 105 V 105


>gi|4503453 endothelial differentiation-related factor 1 isoform
           alpha [Homo sapiens]
          Length = 148

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 35  AGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQ 94
           AG N K + I      +D+  ++LH   V LEV + I QGR  +  T++ L   + +  Q
Sbjct: 46  AGQN-KQHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQ 104

Query: 95  V 95
           V
Sbjct: 105 V 105


>gi|221316624 dystonin isoform 4 [Homo sapiens]
          Length = 5526

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 75   RNPQLYTKEC---LERALAKNEQVKGKIDTMKKFKSLL 109
            R+ +  +K+C   L+RA A+ EQV+G I  +++F S L
Sbjct: 3196 RDLEALSKQCNKLLDRAQAREEQVEGTIKRLEEFYSKL 3233


>gi|221316622 dystonin isoform 3 [Homo sapiens]
          Length = 5537

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 75   RNPQLYTKEC---LERALAKNEQVKGKIDTMKKFKSLL 109
            R+ +  +K+C   L+RA A+ EQV+G I  +++F S L
Sbjct: 3207 RDLEALSKQCNKLLDRAQAREEQVEGTIKRLEEFYSKL 3244


>gi|221316618 dystonin isoform 2 [Homo sapiens]
          Length = 5675

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 75   RNPQLYTKEC---LERALAKNEQVKGKIDTMKKFKSLL 109
            R+ +  +K+C   L+RA A+ EQV+G I  +++F S L
Sbjct: 3345 RDLEALSKQCNKLLDRAQAREEQVEGTIKRLEEFYSKL 3382


>gi|34577047 dystonin isoform 1 [Homo sapiens]
          Length = 5497

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 75   RNPQLYTKEC---LERALAKNEQVKGKIDTMKKFKSLL 109
            R+ +  +K+C   L+RA A+ EQV+G I  +++F S L
Sbjct: 3167 RDLEALSKQCNKLLDRAQAREEQVEGTIKRLEEFYSKL 3204


>gi|34577049 dystonin isoform 1eA precursor [Homo sapiens]
          Length = 5171

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 3/38 (7%)

Query: 75   RNPQLYTKEC---LERALAKNEQVKGKIDTMKKFKSLL 109
            R+ +  +K+C   L+RA A+ EQV+G I  +++F S L
Sbjct: 2841 RDLEALSKQCNKLLDRAQAREEQVEGTIKRLEEFYSKL 2878


>gi|45269141 multimerin 1 [Homo sapiens]
          Length = 1228

 Score = 28.1 bits (61), Expect = 2.3
 Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 37  LNQKLNFIVTGLQD-IDKCRQQLHDITVPLEVFE-YIDQGRN-PQLYTKECLERALAKNE 93
           LNQ L  ++  + + +DK  +QL+D+T  +E+ +  ++QG +  Q  T E  + A+   +
Sbjct: 617 LNQTLAEVLFPMDNKMDKMSEQLNDLTYDMEILQPLLEQGASLRQTMTYEQPKEAIVIRK 676

Query: 94  QVKGKIDTMKKFKSLLIQELSK 115
           +++     +    + +I+EL+K
Sbjct: 677 KIENLTSAVNSL-NFIIKELTK 697


>gi|5032059 S100 calcium-binding protein A12 [Homo sapiens]
          Length = 92

 Score = 27.7 bits (60), Expect = 2.9
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 8  LEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEV 67
          LEEHLE  V    Q  +    F   S+  L Q L       +++    + + D  V  E+
Sbjct: 4  LEEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLT------KELANTIKNIKDKAVIDEI 57

Query: 68 FEYIDQGRNPQLYTKE 83
          F+ +D  ++ Q+  +E
Sbjct: 58 FQGLDANQDEQVDFQE 73


>gi|8922950 meiosis-specific nuclear structural 1 [Homo sapiens]
          Length = 495

 Score = 27.7 bits (60), Expect = 2.9
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 16/81 (19%)

Query: 34  QAGLNQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLY---TKECLERALA 90
           Q  L QKL  ++   +D+++ RQ+L+             Q    ++Y    KE  E+ L 
Sbjct: 299 QNALTQKLEEMLRQREDLEQVRQELY-------------QEEQAEIYKSKLKEEAEKKLR 345

Query: 91  KNEQVKGKIDTMKKFKSLLIQ 111
           K +++K   +     K L++Q
Sbjct: 346 KQKEMKQDFEEQMALKELVLQ 366


>gi|151101140 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 27.7 bits (60), Expect = 2.9
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 19/122 (15%)

Query: 1   MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD 60
           M  +    +E + +F+E IRQL + + +     Q  +NQK   +        K R++  D
Sbjct: 322 MERQLTDTKEKINQFIEEIRQLDMDLEE----HQGEMNQKYKEL--------KKREEHMD 369

Query: 61  ITVPLEVFEYIDQGRNPQLYTKECLE-RALAKNEQVKGKIDTMKKFKSLLIQELSKVFPE 119
             +     E  ++ +N +L  K  +E   +A  E     I+ +++  S+  QEL K+  +
Sbjct: 370 TFI-----ETFEETKNQELKRKAQIEANIVALLEHCSRNINRIEQISSITNQEL-KMMQD 423

Query: 120 DM 121
           D+
Sbjct: 424 DL 425


>gi|151105223 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 27.7 bits (60), Expect = 2.9
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 19/122 (15%)

Query: 1   MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD 60
           M  +    +E + +F+E IRQL + + +     Q  +NQK   +        K R++  D
Sbjct: 322 MERQLTDTKEKINQFIEEIRQLDMDLEE----HQGEMNQKYKEL--------KKREEHMD 369

Query: 61  ITVPLEVFEYIDQGRNPQLYTKECLE-RALAKNEQVKGKIDTMKKFKSLLIQELSKVFPE 119
             +     E  ++ +N +L  K  +E   +A  E     I+ +++  S+  QEL K+  +
Sbjct: 370 TFI-----ETFEETKNQELKRKAQIEANIVALLEHCSRNINRIEQISSITNQEL-KMMQD 423

Query: 120 DM 121
           D+
Sbjct: 424 DL 425


>gi|151105229 coiled-coil domain containing 2 isoform a [Homo
           sapiens]
          Length = 600

 Score = 27.7 bits (60), Expect = 2.9
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 19/122 (15%)

Query: 1   MAEKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHD 60
           M  +    +E + +F+E IRQL + + +     Q  +NQK   +        K R++  D
Sbjct: 322 MERQLTDTKEKINQFIEEIRQLDMDLEE----HQGEMNQKYKEL--------KKREEHMD 369

Query: 61  ITVPLEVFEYIDQGRNPQLYTKECLE-RALAKNEQVKGKIDTMKKFKSLLIQELSKVFPE 119
             +     E  ++ +N +L  K  +E   +A  E     I+ +++  S+  QEL K+  +
Sbjct: 370 TFI-----ETFEETKNQELKRKAQIEANIVALLEHCSRNINRIEQISSITNQEL-KMMQD 423

Query: 120 DM 121
           D+
Sbjct: 424 DL 425


>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
            sapiens]
          Length = 1591

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 19/124 (15%)

Query: 3    EKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDIT 62
            EK    EE  E  ++N+ +    +   Q   +  L QKLN      +  +  +  L +  
Sbjct: 1196 EKITQQEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLN-----CEKDEAIQTALKEFK 1250

Query: 63   VPLEVFEYIDQGRNPQLYTKECLERALAKNEQV--KGKIDTMKKFKSLLIQELSKVFPED 120
            +  EV E            KE LE+      Q+     ID+ +   S L+ EL +   E+
Sbjct: 1251 LEREVVE------------KELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEE 1298

Query: 121  MAKY 124
             AK+
Sbjct: 1299 KAKF 1302


>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
            sapiens]
          Length = 1594

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 19/124 (15%)

Query: 3    EKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQKLNFIVTGLQDIDKCRQQLHDIT 62
            EK    EE  E  ++N+ +    +   Q   +  L QKLN      +  +  +  L +  
Sbjct: 1196 EKITQQEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLN-----CEKDEAIQTALKEFK 1250

Query: 63   VPLEVFEYIDQGRNPQLYTKECLERALAKNEQV--KGKIDTMKKFKSLLIQELSKVFPED 120
            +  EV E            KE LE+      Q+     ID+ +   S L+ EL +   E+
Sbjct: 1251 LEREVVE------------KELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEE 1298

Query: 121  MAKY 124
             AK+
Sbjct: 1299 KAKF 1302


>gi|4758650 kinesin family member 5C [Homo sapiens]
          Length = 957

 Score = 26.9 bits (58), Expect = 5.0
 Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 4/65 (6%)

Query: 51  IDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLI 110
           +DK R  L      L V E  D+ R P  Y K C ER ++  E+V   ID  K  + + +
Sbjct: 140 LDKIRDLLDVSKTNLAVHE--DKNRVP--YVKGCTERFVSSPEEVMDVIDEGKANRHVAV 195

Query: 111 QELSK 115
             +++
Sbjct: 196 TNMNE 200


>gi|226246554 hypothetical protein LOC643677 [Homo sapiens]
          Length = 7081

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 82   KECLERALAKNEQVK-GKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRGE 130
            K+ LE  L K ++ K  KI  +KK KS + Q +     E   +   I+GE
Sbjct: 4030 KKALESILQKEQRQKMEKIRALKKMKSSISQGIQLDIKEQEKRIEHIKGE 4079


>gi|4504425 high-mobility group box 1 [Homo sapiens]
          Length = 215

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 4/68 (5%)

Query: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMKKF-KSLLIQELSKVFP---EDMAKYRSI 127
           D   N   ++K+C ER    + + KGK + M K  K+   +E+    P   E   K++  
Sbjct: 33  DASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDP 92

Query: 128 RGEDHPPS 135
                PPS
Sbjct: 93  NAPKRPPS 100


>gi|4758648 kinesin family member 5B [Homo sapiens]
          Length = 963

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 51  IDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMKKFKSLLI 110
           +DK R  L      L V E  D+ R P  Y K C ER +   ++V   ID  K  + + +
Sbjct: 139 LDKIRDLLDVSKTNLSVHE--DKNRVP--YVKGCTERFVCSPDEVMDTIDEGKSNRHVAV 194

Query: 111 QELSK 115
             +++
Sbjct: 195 TNMNE 199


>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 82   KECLERALAKNEQVK-GKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRGE 130
            K+ LE  L K ++ K  KI  +KK KS + Q +     E   +   I+GE
Sbjct: 3959 KKALESILQKEQRQKMEKIRALKKMKSSISQGIQLDIKEQEKRIEHIKGE 4008


>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 82   KECLERALAKNEQVK-GKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRGE 130
            K+ LE  L K ++ K  KI  +KK KS + Q +     E   +   I+GE
Sbjct: 3959 KKALESILQKEQRQKMEKIRALKKMKSSISQGIQLDIKEQEKRIEHIKGE 4008


>gi|239744870 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
          Length = 6929

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 82   KECLERALAKNEQVK-GKIDTMKKFKSLLIQELSKVFPEDMAKYRSIRGE 130
            K+ LE  L K ++ K  KI  +KK KS + Q +     E   +   I+GE
Sbjct: 3959 KKALESILQKEQRQKMEKIRALKKMKSSISQGIQLDIKEQEKRIEHIKGE 4008


>gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
          Length = 353

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 48  LQDIDKCRQQLHDITVPLEVFEYIDQGRNPQLYTKECLERALAKNEQVKGKIDTMK 103
           + D++K R+ +  +  P      I +  NP + T ECL+      EQV G +++ +
Sbjct: 193 VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKAL----EQVFGSVESSR 244


>gi|154146189 dedicator of cytokinesis 10 [Homo sapiens]
          Length = 2186

 Score = 26.6 bits (57), Expect = 6.6
 Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 87  RALAKNEQVKGKIDTMKKFKSLLIQELSKVFPEDMAK 123
           R++ K+ Q  G +D   +F  L  QE SK+  ED+ K
Sbjct: 562 RSVFKDNQ--GNVDRDSRFSPLFRQESSKISTEDLVK 596


>gi|155030188 mediator complex subunit 7 [Homo sapiens]
          Length = 233

 Score = 26.2 bits (56), Expect = 8.6
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 3   EKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQK 40
           E  +  ++HLE+ +E I+     + D  P S+AG+  K
Sbjct: 148 ETAERFQKHLERVIEMIQNCLASLPDDLPHSEAGMRVK 185


>gi|4758064 mediator complex subunit 7 [Homo sapiens]
          Length = 233

 Score = 26.2 bits (56), Expect = 8.6
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 3   EKFDHLEEHLEKFVENIRQLGIIVSDFQPSSQAGLNQK 40
           E  +  ++HLE+ +E I+     + D  P S+AG+  K
Sbjct: 148 ETAERFQKHLERVIEMIQNCLASLPDDLPHSEAGMRVK 185


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,891,620
Number of Sequences: 37866
Number of extensions: 179132
Number of successful extensions: 570
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 549
Number of HSP's gapped (non-prelim): 44
length of query: 135
length of database: 18,247,518
effective HSP length: 91
effective length of query: 44
effective length of database: 14,801,712
effective search space: 651275328
effective search space used: 651275328
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.