PNMA1 32269

Name: PNMA1	Sequence: fasta or formatted (353aa)		NCBI GI: 52486265
Description: paraneoplastic antigen MA1		Referenced in: Additional Brain Proteins Testes and Sperm
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.1 32 2 C cysteine 0.8 3 1 D aspartate 4.0 14 1 E glutamate 11.6 41 5 F phenylalanine 3.1 11 1 G glycine 6.8 24 2 H histidine 1.1 4 1 I isoleucine 4.5 16 1 K lysine 4.0 14 1 L leucine 11.9 42 2 M methionine 2.8 10 1 N asparagine 4.2 15 2 P proline 5.9 21 2 Q glutamine 4.8 17 1 R arginine 6.2 22 3 S serine 3.7 13 2 T threonine 4.2 15 2 V valine 6.8 24 2 W tryptophan 2.5 9 1 Y tyrosine 1.7 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paraneoplastic antigen MA1 MOAP1 0.517 modulator of apoptosis 1 PNMA2 0.431 paraneoplastic antigen MA2 PNMA3 0.424 paraneoplastic cancer-testis-brain antigen PNMA5 0.421 paraneoplastic antigen like 5 PNMA5 0.421 paraneoplastic antigen like 5 PNMA5 0.421 paraneoplastic antigen like 5 LOC100287500 0.347 PREDICTED: hypothetical protein XP_002343900 PNMA6A 0.347 paraneoplastic antigen like 6A LOC100287466 0.340 PREDICTED: hypothetical protein XP_002343899 LOC100287428 0.340 PREDICTED: hypothetical protein XP_002343898 LOC649201 0.213 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.213 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649201 0.213 PREDICTED: similar to paraneoplastic antigen MA1 [H... LOC649238 0.206 PREDICTED: similar to hCG1645335 LOC649238 0.206 PREDICTED: similar to hCG1645335 PNMAL1 0.184 PNMA-like 1 isoform b PNMAL1 0.184 PNMA-like 1 isoform a ZCCHC18 0.184 zinc finger, CCHC domain containing 18 ZCCHC12 0.182 zinc finger, CCHC domain containing 12 PNMAL2 0.115 PNMA-like 2 LOC100128960 0.105 PREDICTED: similar to paraneoplastic antigen MA2 [H... LOC100128960 0.105 PREDICTED: similar to Putative paraneoplastic antig... CCDC8 0.070 coiled-coil domain containing 8 RCOR1 0.015 REST corepressor 1 TCHP 0.012 trichoplein TCHP 0.012 trichoplein MYH13 0.010 myosin, heavy polypeptide 13, skeletal muscle [Homo... TBC1D4 0.009 TBC1 domain family, member 4 TPM3 0.009 tropomyosin 3 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.