Guide to the Human Genome
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Name: GABRB2 Sequence: fasta or formatted (474aa) NCBI GI: 4503865
Description:

gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 2

Referenced in:

GABA and Glycine

Other entries for this name:
alt prot [512aa] gamma-aminobutyric acid (GABA) A receptor, beta 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         31           2
 C cysteine            0.8          4           1
 D aspartate           6.1         29           2
 E glutamate           3.4         16           1
 F phenylalanine       4.9         23           2
 G glycine             4.6         22           2
 H histidine           1.3          6           1
 I isoleucine          7.2         34           2
 K lysine              5.3         25           2
 L leucine             9.7         46           2
 M methionine          4.0         19           2
 N asparagine          5.1         24           2
 P proline             4.2         20           2
 Q glutamine           2.5         12           2
 R arginine            7.0         33           3
 S serine              6.1         29           2
 T threonine           6.5         31           3
 V valine              7.6         36           2
 W tryptophan          1.9          9           1
 Y tyrosine            5.3         25           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso... 
GABRB2                0.980   gamma-aminobutyric acid (GABA) A receptor, beta 2 is...
GABRB3                0.802   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB1                0.793   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GABRB3                0.781   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRQ                 0.371   gamma-aminobutyric acid (GABA) receptor, theta precur...
GABRD                 0.340   gamma-aminobutyric acid (GABA) A receptor, delta pre...
GABRR1                0.319   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
GABRR2                0.311   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
GABRP                 0.305   gamma-aminobutyric acid (GABA) A receptor, pi 
GABRR3                0.301   gamma-aminobutyric acid (GABA) receptor, rho 3 [Hom...
GABRG2                0.288   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.287   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GLRA1                 0.284   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA2                 0.282   glycine receptor, alpha 2 isoform A 
GLRA2                 0.282   glycine receptor, alpha 2 isoform A 
GLRA2                 0.282   glycine receptor, alpha 2 isoform B 
GLRA3                 0.282   glycine receptor, alpha 3 isoform a 
GLRA1                 0.279   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GLRA3                 0.278   glycine receptor, alpha 3 isoform b 
GABRG1                0.275   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG3                0.274   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GLRA4                 0.274   glycine receptor, alpha 4 precursor 
GABRA2                0.273   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.273   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRA3                0.270   gamma-aminobutyric acid A receptor, alpha 3 precursor...
GABRA1                0.269   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.269   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.269   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.269   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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