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Search of human proteins with 48762947
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48762947 variable charge, X-linked 3A [Homo sapiens]
(186 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48762947 variable charge, X-linked 3A [Homo sapiens] 363 e-101
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 354 3e-98
gi|66932943 variable charge, X chromosome [Homo sapiens] 353 6e-98
gi|49619239 variable charge, X-linked 2 [Homo sapiens] 248 2e-66
gi|49355828 variable charge, Y-linked 1B [Homo sapiens] 220 5e-58
gi|4759304 variable charge, Y-linked [Homo sapiens] 220 5e-58
gi|44890059 involucrin [Homo sapiens] 69 2e-12
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 55 5e-08
gi|4506879 selectin P ligand [Homo sapiens] 51 7e-07
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 50 9e-07
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 50 1e-06
gi|16445033 ACRC protein [Homo sapiens] 49 2e-06
gi|148277037 AP2 associated kinase 1 [Homo sapiens] 49 2e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 49 3e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 49 3e-06
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens] 49 3e-06
gi|21361639 DIPB protein [Homo sapiens] 48 4e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 48 6e-06
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 48 6e-06
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 47 7e-06
gi|82830424 gon-4-like isoform a [Homo sapiens] 47 1e-05
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 46 2e-05
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 46 2e-05
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 46 2e-05
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 46 2e-05
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 46 2e-05
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 46 2e-05
gi|156071476 hypothetical protein LOC401137 [Homo sapiens] 46 2e-05
gi|239746922 PREDICTED: similar to cancer/testis antigen family ... 46 2e-05
gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo ... 46 2e-05
>gi|48762947 variable charge, X-linked 3A [Homo sapiens]
Length = 186
Score = 363 bits (933), Expect = e-101
Identities = 186/186 (100%), Positives = 186/186 (100%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA
Sbjct: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV
Sbjct: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
Query: 121 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM
Sbjct: 121 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
Query: 181 EELPSV 186
EELPSV
Sbjct: 181 EELPSV 186
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 354 bits (908), Expect = 3e-98
Identities = 181/182 (99%), Positives = 181/182 (99%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
MSPKPRASGPPAKA EAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA
Sbjct: 1 MSPKPRASGPPAKAKEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV
Sbjct: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
Query: 121 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM
Sbjct: 121 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
Query: 181 EE 182
EE
Sbjct: 181 EE 182
>gi|66932943 variable charge, X chromosome [Homo sapiens]
Length = 206
Score = 353 bits (905), Expect = 6e-98
Identities = 180/182 (98%), Positives = 181/182 (99%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA
Sbjct: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
AVTAPEAES PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQE+ELEEPLSQESEV
Sbjct: 61 AVTAPEAESAPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQEAELEEPLSQESEV 120
Query: 121 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM
Sbjct: 121 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
Query: 181 EE 182
EE
Sbjct: 181 EE 182
>gi|49619239 variable charge, X-linked 2 [Homo sapiens]
Length = 139
Score = 248 bits (633), Expect = 2e-66
Identities = 124/139 (89%), Positives = 130/139 (93%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA
Sbjct: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
AVTAPEAES PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESE+EEPLSQESEV
Sbjct: 61 AVTAPEAESAPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESEVEEPLSQESEV 120
Query: 121 EEPLSQESQVEEPLSQESE 139
EEPL+ P+S+ ++
Sbjct: 121 EEPLTVWMASFSPVSESTD 139
>gi|49355828 variable charge, Y-linked 1B [Homo sapiens]
Length = 125
Score = 220 bits (561), Expect = 5e-58
Identities = 109/116 (93%), Positives = 112/116 (96%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
MSPKPRASGPPAKA E GKRKSSSQPSPS PKKKTTKVA+KG+AVR GRRGKKGAATKMA
Sbjct: 1 MSPKPRASGPPAKAKETGKRKSSSQPSPSGPKKKTTKVAEKGEAVRGGRRGKKGAATKMA 60
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ 116
AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLS+
Sbjct: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSK 116
Score = 31.2 bits (69), Expect = 0.54
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 137 ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
ES P + +E E EEP+S+ +Q +PLSQESE+EE
Sbjct: 68 ESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQ-HDPLSQESELEE 112
>gi|4759304 variable charge, Y-linked [Homo sapiens]
Length = 125
Score = 220 bits (561), Expect = 5e-58
Identities = 109/116 (93%), Positives = 112/116 (96%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
MSPKPRASGPPAKA E GKRKSSSQPSPS PKKKTTKVA+KG+AVR GRRGKKGAATKMA
Sbjct: 1 MSPKPRASGPPAKAKETGKRKSSSQPSPSGPKKKTTKVAEKGEAVRGGRRGKKGAATKMA 60
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ 116
AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLS+
Sbjct: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSK 116
Score = 31.2 bits (69), Expect = 0.54
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 137 ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
ES P + +E E EEP+S+ +Q +PLSQESE+EE
Sbjct: 68 ESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQ-HDPLSQESELEE 112
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 69.3 bits (168), Expect = 2e-12
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 88 ELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQE 147
ELP ++ EG QE +L+ P QE ++E P QE Q+E P QE ++E P QE
Sbjct: 154 ELPEQQ---EGHLKHLEQQEGQLKHPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQE 210
Query: 148 SQVEEPLSQESEVEEPLSQESQVEEPLSQESEME 181
Q+E P QE ++E P QE Q+E P QE ++E
Sbjct: 211 GQLELPEQQEGQLELPEQQEGQLELPQQQEGQLE 244
Score = 68.9 bits (167), Expect = 2e-12
Identities = 37/85 (43%), Positives = 49/85 (57%)
Query: 97 EGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQ 156
EG P QE +LE P QE ++E P QE Q+E P QE ++E P QE Q+E P Q
Sbjct: 170 EGQLKHPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQ 229
Query: 157 ESEVEEPLSQESQVEEPLSQESEME 181
E ++E P QE Q+E QE ++E
Sbjct: 230 EGQLELPQQQEGQLELSEQQEGQLE 254
Score = 67.8 bits (164), Expect = 5e-12
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Query: 49 RRGKKGAATKMAAVTAPEAESG-----PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDP 103
+R ++ K + PE + G G P Q+ Q ELP ++ EG P
Sbjct: 140 KRDEQLGMKKEQLLELPEQQEGHLKHLEQQEGQLKHPEQQEGQLELPEQQ---EGQLELP 196
Query: 104 LSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 163
QE +LE P QE ++E P QE Q+E P QE ++E P QE Q+E QE ++E
Sbjct: 197 EQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELS 256
Query: 164 LSQESQVEEPLSQESEME 181
QE Q++ QE ++E
Sbjct: 257 EQQEGQLKHLEHQEGQLE 274
Score = 65.5 bits (158), Expect = 3e-11
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 91 PEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQV 150
PE+ EG P QE +LE P QE ++E P QE Q+E P QE ++E P QE Q+
Sbjct: 176 PEQ--QEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPEQQEGQL 233
Query: 151 EEPLSQESEVEEPLSQESQVEEPLSQESEMEEL 183
E P QE ++E QE Q+E QE +++ L
Sbjct: 234 ELPQQQEGQLELSEQQEGQLELSEQQEGQLKHL 266
Score = 64.7 bits (156), Expect = 4e-11
Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 3/109 (2%)
Query: 75 GPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPL 134
G + P Q+ Q ELP ++ EG P QE +LE P QE ++E P QE Q+E P
Sbjct: 181 GQLELPEQQEGQLELPEQQ---EGQLELPEQQEGQLELPEQQEGQLELPEQQEGQLELPQ 237
Query: 135 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEL 183
QE ++E QE Q+E QE +++ QE Q+E P Q +++ L
Sbjct: 238 QQEGQLELSEQQEGQLELSEQQEGQLKHLEHQEGQLEVPEEQMGQLKYL 286
Score = 60.5 bits (145), Expect = 8e-10
Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 75 GPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPL 134
G + P Q+ Q ELP ++ EG P QE +LE P QE ++E P QE Q+E
Sbjct: 191 GQLELPEQQEGQLELPEQQ---EGQLELPEQQEGQLELPEQQEGQLELPQQQEGQLELSE 247
Query: 135 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEL 183
QE ++E QE Q++ QE ++E P Q Q++ QE +++ L
Sbjct: 248 QQEGQLELSEQQEGQLKHLEHQEGQLEVPEEQMGQLKYLEQQEGQLKHL 296
Score = 57.0 bits (136), Expect = 9e-09
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 75 GPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPL 134
G + P Q+ Q ELP ++ EG P QE +LE P QE ++E QE Q+E
Sbjct: 201 GQLELPEQQEGQLELPEQQ---EGQLELPEQQEGQLELPQQQEGQLELSEQQEGQLELSE 257
Query: 135 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEELP 184
QE +++ QE Q+E P Q +++ QE Q++ L Q+ + ELP
Sbjct: 258 QQEGQLKHLEHQEGQLEVPEEQMGQLKYLEQQEGQLKH-LDQQEKQPELP 306
Score = 52.0 bits (123), Expect = 3e-07
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 3/109 (2%)
Query: 75 GPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPL 134
G + P Q+ Q ELP ++ EG P QE +LE QE ++E QE Q++
Sbjct: 211 GQLELPEQQEGQLELPEQQ---EGQLELPQQQEGQLELSEQQEGQLELSEQQEGQLKHLE 267
Query: 135 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEL 183
QE ++E P Q Q++ QE +++ QE Q E P Q +++ L
Sbjct: 268 HQEGQLEVPEEQMGQLKYLEQQEGQLKHLDQQEKQPELPEQQMGQLKHL 316
Score = 46.6 bits (109), Expect = 1e-05
Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 82 QELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVE 141
Q+ Q E+P ++ G + +E +LE P QE +V+ QE+Q+E P Q + +
Sbjct: 445 QQQGQLEVPEQQV---GQPKNLEQEEKQLELPEQQEGQVKHLEKQEAQLELPEQQVGQPK 501
Query: 142 EPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
QE +E P Q+ +++ QE Q+++ Q+ ++E+
Sbjct: 502 HLEQQEKHLEHPEQQDGQLKHLEQQEGQLKDLEQQKGQLEQ 542
Score = 45.8 bits (107), Expect = 2e-05
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 75 GPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPL 134
G + P Q+ Q ELP ++ EG QE +LE QE +++ QE Q+E P
Sbjct: 221 GQLELPEQQEGQLELPQQQ---EGQLELSEQQEGQLELSEQQEGQLKHLEHQEGQLEVPE 277
Query: 135 SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEL 183
Q +++ QE Q++ QE + E P Q Q++ QE + + L
Sbjct: 278 EQMGQLKYLEQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHL 326
Score = 45.1 bits (105), Expect = 4e-05
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 106 QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLS 165
Q+ +LE P Q + + +E Q+E P QE +V+ QE+Q+E P Q + +
Sbjct: 446 QQGQLEVPEQQVGQPKNLEQEEKQLELPEQQEGQVKHLEKQEAQLELPEQQVGQPKHLEQ 505
Query: 166 QESQVEEPLSQESEMEEL 183
QE +E P Q+ +++ L
Sbjct: 506 QEKHLEHPEQQDGQLKHL 523
Score = 44.3 bits (103), Expect = 6e-05
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 66 EAESGPAAPGPSDQPSQELPQHEL-PPEEPVSEGTQHD-PLSQESELEEPLSQESEVEEP 123
E + G Q E+P+ ++ P+ E Q + P QE +++ QE+++E P
Sbjct: 434 EEQEGQLKHLEQQQGQLEVPEQQVGQPKNLEQEEKQLELPEQQEGQVKHLEKQEAQLELP 493
Query: 124 LSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPL 174
Q Q + QE +E P Q+ Q++ QE ++++ Q+ Q+E+P+
Sbjct: 494 EQQVGQPKHLEQQEKHLEHPEQQDGQLKHLEQQEGQLKDLEQQKGQLEQPV 544
Score = 44.3 bits (103), Expect = 6e-05
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 97 EGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQ 156
+G P Q + + +E ++E P QE QV+ QE+++E P Q Q + Q
Sbjct: 447 QGQLEVPEQQVGQPKNLEQEEKQLELPEQQEGQVKHLEKQEAQLELPEQQVGQPKHLEQQ 506
Query: 157 ESEVEEPLSQESQVEEPLSQESEMEEL 183
E +E P Q+ Q++ QE ++++L
Sbjct: 507 EKHLEHPEQQDGQLKHLEQQEGQLKDL 533
Score = 41.2 bits (95), Expect = 5e-04
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 106 QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLS 165
+E +L+ + QE +++ + QE Q+E+ Q +E+ + Q +EE Q +E+
Sbjct: 389 EEGQLKHLVQQEGQLKHLVQQEGQLEQQERQVEHLEQQVGQLKHLEEQEGQLKHLEQQQG 448
Query: 166 Q----ESQVEEP--LSQESEMEELP 184
Q E QV +P L QE + ELP
Sbjct: 449 QLEVPEQQVGQPKNLEQEEKQLELP 473
Score = 41.2 bits (95), Expect = 5e-04
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 97 EGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQ 156
EG + QE +LE+ Q +E+ + Q +EE QE +++ Q+ Q+E P Q
Sbjct: 400 EGQLKHLVQQEGQLEQQERQVEHLEQQVGQLKHLEE---QEGQLKHLEQQQGQLEVPEQQ 456
Query: 157 ESEVEEPLSQESQVEEPLSQESEMEEL 183
+ + +E Q+E P QE +++ L
Sbjct: 457 VGQPKNLEQEEKQLELPEQQEGQVKHL 483
Score = 40.8 bits (94), Expect = 7e-04
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 66 EAESGPAAPGPSDQPSQELPQHELPPEEPVS--EGTQHDPLSQESELEEPLSQESEVEEP 123
E + G + ELP+ ++ + + EG QE +LE+ QE +++
Sbjct: 287 EQQEGQLKHLDQQEKQPELPEQQMGQLKHLEQQEGQPKHLEQQEGQLEQLEEQEGQLKHL 346
Query: 124 LSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEEL 183
QE Q+E QE ++ P Q Q+++ Q+ + + +E Q++ + QE +++ L
Sbjct: 347 EQQEGQLEHLEHQEGQLGLPEQQVLQLKQLEKQQGQPKHLEEEEGQLKHLVQQEGQLKHL 406
Score = 39.7 bits (91), Expect = 0.002
Identities = 23/78 (29%), Positives = 40/78 (51%)
Query: 106 QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLS 165
Q +L+ QE +++ Q+ Q+E P Q + + +E Q+E P QE +V+
Sbjct: 426 QVGQLKHLEEQEGQLKHLEQQQGQLEVPEQQVGQPKNLEQEEKQLELPEQQEGQVKHLEK 485
Query: 166 QESQVEEPLSQESEMEEL 183
QE+Q+E P Q + + L
Sbjct: 486 QEAQLELPEQQVGQPKHL 503
Score = 38.1 bits (87), Expect = 0.004
Identities = 22/85 (25%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 98 GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
G + Q +LE+ Q +EE +E Q++ + QE +++ + QE Q+E+ Q
Sbjct: 364 GLPEQQVLQLKQLEKQQGQPKHLEE---EEGQLKHLVQQEGQLKHLVQQEGQLEQQERQV 420
Query: 158 SEVEEPLSQESQVEEPLSQESEMEE 182
+E+ + Q +EE Q +E+
Sbjct: 421 EHLEQQVGQLKHLEEQEGQLKHLEQ 445
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 54.7 bits (130), Expect = 5e-08
Identities = 43/187 (22%), Positives = 85/187 (45%), Gaps = 8/187 (4%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAA 61
SP + P KA K ++ S P+K T K +A + + A K
Sbjct: 724 SPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPE 783
Query: 62 VTAPEAESGPAAPGPSDQPSQE---LPQHELPPEEPVSEGTQHDPLSQESELEEPLSQES 118
+ +P + P +E P+ E+P +E V + + QE +++EP +
Sbjct: 784 KAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAE 843
Query: 119 EVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQES 178
E + P + +++ E+ S++ E + + + +VEE +E VE+P +ES+VE +
Sbjct: 844 EEKAPATPKTE-EKKDSKKEEAPKKEAPKPKVEE--KKEPAVEKP--KESKVEAKKEEAE 898
Query: 179 EMEELPS 185
+ +++P+
Sbjct: 899 DKKKVPT 905
Score = 53.9 bits (128), Expect = 8e-08
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 11/181 (6%)
Query: 9 GPPAKATEAGKRKSSSQPSP---SDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAP 65
G + E G+ ++ S P+ S K+ + V ++ K+ + +K A A V +P
Sbjct: 488 GGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSP 547
Query: 66 EAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLS 125
E PA P + P+ EE S P +S +E +E + P
Sbjct: 548 EKAKSPAKEEAKSPPEAKSPE----KEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEK 603
Query: 126 QESQVEEPLSQESEVEEPLSQE----SQVEEPLSQESEVEEPLSQESQVEEPLSQESEME 181
+S V+E +E + P+ +E ++V+ P +S +E + + P +E++
Sbjct: 604 AKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSP 663
Query: 182 E 182
E
Sbjct: 664 E 664
Score = 51.2 bits (121), Expect = 5e-07
Identities = 38/189 (20%), Positives = 76/189 (40%), Gaps = 8/189 (4%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAA 61
SP + PA+A K ++ S P+K + ++ K+ + +K A A
Sbjct: 518 SPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAE 577
Query: 62 VTAPEAESGPAAPGPSDQPSQELPQHELPP--EEPVSEGTQHDPLSQESELEEPLSQESE 119
V +PE PA + P+ P EE S P+ +E++ + +
Sbjct: 578 VKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEK 637
Query: 120 VEEPLSQESQVEEPLS--QESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE----P 173
+ P +E++ E ++ E + P +S V+ + + P+ E++ E P
Sbjct: 638 AKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSP 697
Query: 174 LSQESEMEE 182
+ +E++ E
Sbjct: 698 VKEEAKSPE 706
Score = 49.7 bits (117), Expect = 1e-06
Identities = 37/174 (21%), Positives = 70/174 (40%), Gaps = 8/174 (4%)
Query: 11 PAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAESG 70
P KA K ++ S P+K + V ++ K+ + K A A V +PE
Sbjct: 581 PEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAKS 640
Query: 71 PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ--ESEVEEPLSQES 128
P + P+ EE S P+ E++ E ++E + P +S
Sbjct: 641 PTKEEAKSPEKAKSPE----KEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKS 696
Query: 129 QVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
V+E + + P+ +E+ + P +S V+E + + P+ +E++ E
Sbjct: 697 PVKEEAKSPEKAKSPVKEEA--KSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPE 748
Score = 47.8 bits (112), Expect = 6e-06
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 15/179 (8%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAA 61
SP+ S +A K KS + P+K + V ++ K + + K A
Sbjct: 690 SPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEA----- 744
Query: 62 VTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVE 121
+PE P D S P+ + P +E P +S ++E + + +
Sbjct: 745 -KSPEKAKSPEKAKTLDVKS---PEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAK 800
Query: 122 EPLSQESQV-EEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
PL ++++ E+ + ++ EV+ P+ +E E+P QE +V+EP + + + P + ++E
Sbjct: 801 SPLKEDAKAPEKEIPKKEEVKSPVKEE---EKP--QEVKVKEPPKKAEEEKAPATPKTE 854
Score = 46.6 bits (109), Expect = 1e-05
Identities = 40/189 (21%), Positives = 76/189 (40%), Gaps = 18/189 (9%)
Query: 11 PAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAESG 70
P KA K ++ S P P+K+ K + K+ + + K A A +PE
Sbjct: 547 PEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKS 606
Query: 71 PA---APGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLS--QESEVEEPLS 125
P A P++ S + + P E E + P +E++ E ++ E + P
Sbjct: 607 PVKEEAKSPAEAKSPVKEEAKSPAEVKSPEKAK-SPTKEEAKSPEKAKSPEKEEAKSPEK 665
Query: 126 QESQVEEPLSQESEVEEPLSQESQVEE----PLSQE--------SEVEEPLSQESQVEEP 173
+S V+ + + P+ E++ E P+ +E S V+E + + P
Sbjct: 666 AKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSP 725
Query: 174 LSQESEMEE 182
+ +E++ E
Sbjct: 726 VKEEAKTPE 734
Score = 34.7 bits (78), Expect = 0.049
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%)
Query: 4 KPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVT 63
KP+ S AK EA +K P P K +V + K + KK A
Sbjct: 884 KPKESKVEAKKEEAEDKKKVPTPEKEAPAK--VEVKEDAKPKEKTEVAKKEPDDAKAKEP 941
Query: 64 APEAESGPAAPGPSDQPSQELPQHELPPEEPVSEG-TQHDPLSQESELEEPLSQESEVEE 122
+ AE AAP D ++ + P E+P +E + D + E +P ++++E
Sbjct: 942 SKPAEKKEAAPEKKDTKEEKAKK---PEEKPKTEAKAKEDDKTLSKEPSKPKAEKAEKSS 998
Query: 123 PLSQE 127
Q+
Sbjct: 999 STDQK 1003
Score = 32.3 bits (72), Expect = 0.24
Identities = 19/74 (25%), Positives = 38/74 (51%)
Query: 106 QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLS 165
++ ++ E +E+ + E ++E+QV E +++E E E + + E +E+E E +
Sbjct: 442 EKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEET 501
Query: 166 QESQVEEPLSQESE 179
+ EE S E E
Sbjct: 502 KSPPAEEAASPEKE 515
Score = 30.8 bits (68), Expect = 0.70
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 103 PLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEE 162
P S L + S + ++ ++ +V E +E+ + E ++E+QV E +++E E E
Sbjct: 419 PFSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKE- 477
Query: 163 PLSQESQVEEPLSQESEME 181
+E EE +E E E
Sbjct: 478 -AKEEEGKEEEGGEEEEAE 495
>gi|4506879 selectin P ligand [Homo sapiens]
Length = 402
Score = 50.8 bits (120), Expect = 7e-07
Identities = 36/179 (20%), Positives = 76/179 (42%), Gaps = 9/179 (5%)
Query: 10 PPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAV--TAPEA 67
P + E R+S+ + + TT++A G AA ++ A EA
Sbjct: 78 PESTTVEPAARRSTGLDAGGAVTELTTELANMGNL------STDSAAMEIQTTQPAATEA 131
Query: 68 ESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQE 127
++ P A + + + P +E P + E++ +P E++ P + E
Sbjct: 132 QTTPLAATEAQTTRLTATEAQTTPLA-ATEAQTTPPAATEAQTTQPTGLEAQTTAPAAME 190
Query: 128 SQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEELPSV 186
+Q P + E++ P + E+Q + + E++ P + E+Q +P + E++ L ++
Sbjct: 191 AQTTAPAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAM 249
Score = 45.8 bits (107), Expect = 2e-05
Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 62 VTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVE 121
+TA EA++ P A + PP ++ TQ P E++ P + E++
Sbjct: 146 LTATEAQTTPLAATEAQTT---------PPAATEAQTTQ--PTGLEAQTTAPAAMEAQTT 194
Query: 122 EPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEME 181
P + E+Q P + E++ + + E+Q P + E++ +P + E+Q PL+ +
Sbjct: 195 APAAMEAQTTPPAAMEAQTTQTTAMEAQTTAPEATEAQTTQPTATEAQT-TPLAAMEALS 253
Query: 182 ELPS 185
PS
Sbjct: 254 TEPS 257
Score = 38.9 bits (89), Expect = 0.003
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 62 VTAPEAESGP--AAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESE 119
+ A EA++ P A + QP+ Q P E P + E++ P + E++
Sbjct: 156 LAATEAQTTPPAATEAQTTQPTGLEAQTTAPA---AMEAQTTAPAAMEAQTTPPAAMEAQ 212
Query: 120 VEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQ 176
+ + E+Q P + E++ +P + E+Q + E+ EP + E+ EP ++
Sbjct: 213 TTQTTAMEAQTTAPEATEAQTTQPTATEAQTTPLAAMEALSTEPSATEALSMEPTTK 269
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 50.4 bits (119), Expect = 9e-07
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 2 SPKPRASGP--PAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKM 59
SP+P G P KAT+ K K + PK+K K KK K + + KK + K
Sbjct: 113 SPRPPKKGKEKPPKATKKPKEKPPK--ATKKPKEKPPKATKKPKE-KPPKATKKPPSGKR 169
Query: 60 AAVTAP-EAESGPAAPGPSDQPSQELPQH---------ELPPEEPVSEGTQHDPLSQESE 109
+ AP E P P PS P +ELPQ + P EE E +H P +E
Sbjct: 170 PPILAPSETLEWPLPPPPSPGP-EELPQEGGAPLSNNWQNPGEETHVEAREHQPEPEEET 228
Query: 110 LEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPL-SQES 168
+ L ++E ++ + E + ++ + P S+ + E + E + P + E
Sbjct: 229 EQPTLDYNDQIER---EDYEDFEYIRRQKQPRPPPSRRRRPERVWPEPPEEKAPAPAPEE 285
Query: 169 QVEEPL 174
++E P+
Sbjct: 286 RIEPPV 291
Score = 34.7 bits (78), Expect = 0.049
Identities = 47/189 (24%), Positives = 66/189 (34%), Gaps = 26/189 (13%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVR-----------RGRRG 51
P P + KA GK + P +KT KKGK + R
Sbjct: 58 PPPEPTPRVRKAQAGGKPGKRPGTAAEVPPEKTKDKGKKGKKDKGPKVPKESLEGSPRPP 117
Query: 52 KKGAATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDP-------L 104
KKG A P+ + A P ++P P+ P+E + T+ P L
Sbjct: 118 KKGKEKPPKATKKPKEKPPKATKKPKEKP----PKATKKPKEKPPKATKKPPSGKRPPIL 173
Query: 105 SQESELEEPL-SQESEVEEPLSQESQVEEPLSQE-SEVEEPLSQESQVEEPLSQESEVEE 162
+ LE PL S E L QE PLS E E++ +P +E +
Sbjct: 174 APSETLEWPLPPPPSPGPEELPQEGGA--PLSNNWQNPGEETHVEAREHQPEPEEETEQP 231
Query: 163 PLSQESQVE 171
L Q+E
Sbjct: 232 TLDYNDQIE 240
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 50.1 bits (118), Expect = 1e-06
Identities = 50/145 (34%), Positives = 63/145 (43%), Gaps = 21/145 (14%)
Query: 56 ATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLS 115
A+ AAV PE + PAA P+ + PPEEP S P + EEP S
Sbjct: 1001 ASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTS------PAAAVPTPEEPTS 1054
Query: 116 QESEV---EEPLSQESQV---EEPLSQESEV---EEPLSQESQV---EEPLSQESEV--- 160
+ V EEP S + V EEP S + V EEP S + V EEP S + V
Sbjct: 1055 PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTP 1114
Query: 161 EEPLSQESQVEEPLSQESEMEELPS 185
EEP S + V P S +P+
Sbjct: 1115 EEPASPAAAVPTPEEPASPAAAVPT 1139
Score = 45.1 bits (105), Expect = 4e-05
Identities = 56/203 (27%), Positives = 76/203 (37%), Gaps = 32/203 (15%)
Query: 3 PKPRASGPPAKATEAGKRKSS---SQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKM 59
P P PA A + +S + P+P +P V + A+
Sbjct: 1086 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEP-----------ASPA 1134
Query: 60 AAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQES--------ELE 111
AAV PE + PA P+ + S PEE S P ES LE
Sbjct: 1135 AAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAA-VPTPAESASFAAVVATLE 1193
Query: 112 EPLSQESEVEEPLSQESQVEEPLSQESEV---EEPLSQESQV---EEPLSQESEV---EE 162
EP S + V P + + +EE S + V EEP S + V EEP S + V EE
Sbjct: 1194 EPTSPAASVPTPAAMVATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEE 1253
Query: 163 PLSQESQVEEPLSQESEMEELPS 185
P S + V P S +P+
Sbjct: 1254 PTSSAAAVLTPEELSSPAASVPT 1276
Score = 44.7 bits (104), Expect = 5e-05
Identities = 50/146 (34%), Positives = 66/146 (45%), Gaps = 25/146 (17%)
Query: 57 TKMAAVTAPEAESGPAAPGPS-DQPSQELPQHELP-PEEPVSEGTQHDPLSQESELEEPL 114
T V+ PE + PAA P+ ++P+ P +P PEEP S P + EEP
Sbjct: 989 TAAVRVSTPEEPASPAAAVPTPEEPTS--PAAAVPTPEEPTS------PAAAVPPPEEPT 1040
Query: 115 SQESEV---EEPLSQESQV---EEPLSQESEV---EEPLSQESQV---EEPLSQESEV-- 160
S + V EEP S + V EEP S + V EEP S + V EEP S + V
Sbjct: 1041 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPT 1100
Query: 161 -EEPLSQESQVEEPLSQESEMEELPS 185
EEP S + V P S +P+
Sbjct: 1101 PEEPTSPAAAVPTPEEPASPAAAVPT 1126
Score = 43.5 bits (101), Expect = 1e-04
Identities = 59/218 (27%), Positives = 80/218 (36%), Gaps = 43/218 (19%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAV 62
P P PA A + +S + P++ T+ A AV AA AV
Sbjct: 1008 PTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAA----AVPTPEEPTSPAA----AV 1059
Query: 63 TAPEAESGPAAPGPSDQ----PSQELPQHELP---------PEEPVSEG----TQHDPLS 105
PE + PAA P+ + P+ +P E P PEEP S T +P S
Sbjct: 1060 PTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPAS 1119
Query: 106 QESEL---EEPLSQESEV---EEPLSQESQVEEPLSQESEV------EEPLSQESQVEEP 153
+ + EEP S + V EEP V P S EE S + V P
Sbjct: 1120 PAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTP 1179
Query: 154 LSQES------EVEEPLSQESQVEEPLSQESEMEELPS 185
S +EEP S + V P + + +EE S
Sbjct: 1180 AESASFAAVVATLEEPTSPAASVPTPAAMVATLEEFTS 1217
Score = 41.2 bits (95), Expect = 5e-04
Identities = 45/171 (26%), Positives = 60/171 (35%), Gaps = 31/171 (18%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAV 62
P P S PA A P+P++ VA + T A V
Sbjct: 1164 PTPEESASPAAAV----------PTPAESASFAAVVA----TLEEPTSPAASVPTPAAMV 1209
Query: 63 TAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEE 122
E + PAA P+ + L PEEP S P + LEEP S + V
Sbjct: 1210 ATLEEFTSPAASVPTSEEPASLAAAVSNPEEPTS------PAAAVPTLEEPTSSAAAVLT 1263
Query: 123 PLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEP 173
P ++ P + EEP S P + S +EEP S + V P
Sbjct: 1264 P----EELSSPAASVPTPEEPAS-------PAAAVSNLEEPASPAAAVPTP 1303
>gi|16445033 ACRC protein [Homo sapiens]
Length = 691
Score = 49.3 bits (116), Expect = 2e-06
Identities = 27/115 (23%), Positives = 54/115 (46%)
Query: 65 PEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
P+ S ++ SD S + P++ + D S +S++ + S +SE +
Sbjct: 189 PDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDS 248
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
S +S+ + S +SE + S +S+ + S +SE + S +S+ + S +SE
Sbjct: 249 SDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSDDSEASDDSSDDSE 303
Score = 48.1 bits (113), Expect = 4e-06
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 77 SDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQ 136
SD P ++P ++ + D S +SE + S +SE + S +S+ + S
Sbjct: 222 SDVPDDSSDDSDVP-DDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSD 280
Query: 137 ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
+SE + S +S+ + S +SE + S +S V E S +S++ +
Sbjct: 281 DSEASDDSSDDSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPD 326
Score = 47.0 bits (110), Expect = 9e-06
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 77 SDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQ 136
SD P E P ++ + D S +SE + S +SE + S +S+ + S
Sbjct: 232 SDVPDDSSDDSEAP-DDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASDDSSD 290
Query: 137 ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEM 180
+SE + S +S+ + S +S+V E S +S V + S + E+
Sbjct: 291 DSEASDDSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEV 334
Score = 46.6 bits (109), Expect = 1e-05
Identities = 26/119 (21%), Positives = 53/119 (44%)
Query: 64 APEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEP 123
AP+ S + + ++P + D S +S++ + S +S+V +
Sbjct: 168 APDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDDKSDDSDVPDD 227
Query: 124 LSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
S +S V + S +SE + S +S+ + S +SE + S +S+ + S +SE +
Sbjct: 228 SSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEASD 286
Score = 43.9 bits (102), Expect = 8e-05
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 63 TAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEE 122
++ ++E+ + S+ P E P ++ + D S +SE + S +SE +
Sbjct: 238 SSDDSEAPDDSSDDSEAPDDSSDDSEAP-DDSSDDSEAPDDSSDDSEASDDSSDDSEASD 296
Query: 123 PLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
S +S+ + S +S+V E S +S V + S + EV P + S E E+ E
Sbjct: 297 DSSDDSEAPDDKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAEDLCNEGQIASDEEELVE 356
Score = 43.5 bits (101), Expect = 1e-04
Identities = 21/81 (25%), Positives = 43/81 (53%)
Query: 102 DPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVE 161
D S +S++ + S +S+V + S +S+ + S +SE + S +S+ + S +SE
Sbjct: 216 DDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAP 275
Query: 162 EPLSQESQVEEPLSQESEMEE 182
+ S +S+ + S +SE +
Sbjct: 276 DDSSDDSEASDDSSDDSEASD 296
Score = 41.6 bits (96), Expect = 4e-04
Identities = 24/116 (20%), Positives = 49/116 (42%)
Query: 64 APEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEP 123
AP+ S + + E P + + + + + S +S+V +
Sbjct: 158 APDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDDNSDDSDVPDD 217
Query: 124 LSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
S +S V + S +S+V + S +S+ + S +SE + S +S+ + S +SE
Sbjct: 218 KSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSEAPDDSSDDSE 273
Score = 38.5 bits (88), Expect = 0.003
Identities = 23/116 (19%), Positives = 47/116 (40%)
Query: 64 APEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEP 123
AP+ S + + E P E + + + ++ + + +
Sbjct: 148 APDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDSSDDNSDDSSDD 207
Query: 124 LSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
S +S V + S +S+V + S +S V + S +SE + S +S+ + S +SE
Sbjct: 208 NSDDSDVPDDKSDDSDVPDDSSDDSDVPDDSSDDSEAPDDSSDDSEAPDDSSDDSE 263
Score = 38.1 bits (87), Expect = 0.004
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 63 TAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEE 122
++ ++E+ + S+ P E P ++ + D S +SE + S +SE +
Sbjct: 248 SSDDSEAPDDSSDDSEAPDDSSDDSEAP-DDSSDDSEASDDSSDDSEASDDSSDDSEAPD 306
Query: 123 PLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
S +S V E S +S+V + S + +V P + S E ++ E + S+
Sbjct: 307 DKSDDSDVPEDKSDDSDVPDDNSDDLEVPVPAEDLCNEGQIASDEEELVEAAAAVSQ 363
Score = 35.4 bits (80), Expect = 0.029
Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 77 SDQPSQELPQHELPPEEP---VSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEP 133
SD S E + +EP +S+ D + E+ + S +SE + S +S+ +
Sbjct: 102 SDDESPECCHVKPAIQEPPIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDD 161
Query: 134 LSQESEVEEPLSQESQVEEPLSQESEVEEPLSQES 168
S +SE + S +S+ + S +S+V + S +S
Sbjct: 162 NSDDSEAPDDNSDDSEAPDDNSDDSDVPDDNSDDS 196
Score = 32.0 bits (71), Expect = 0.32
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 95 VSEGTQHDPLS-QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEP 153
V Q P+ + + ++ + EV + S +S+ + S +SE + S +S+ +
Sbjct: 112 VKPAIQEPPIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDD 171
Query: 154 LSQESEVEEPLSQESQVEEPLSQES 178
S +SE + S +S V + S +S
Sbjct: 172 NSDDSEAPDDNSDDSDVPDDNSDDS 196
Score = 30.4 bits (67), Expect = 0.92
Identities = 21/81 (25%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 5 PRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRR---------GKKGA 55
P P ++GKRKS ++ P+K+ TK + R+ + K+ A
Sbjct: 398 PTEEEPAPVVEQSGKRKSKTKTIVEPPRKRQTKTKNIVEPPRKRQTKTKNIVEPLRKRKA 457
Query: 56 ATKMAAVTAPEAESGPAAPGP 76
TK +VT + GP+ P
Sbjct: 458 KTKNVSVTPGHKKRGPSKKKP 478
Score = 28.5 bits (62), Expect = 3.5
Identities = 15/75 (20%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 110 LEEP--LSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQE 167
++EP + + + ++ + +V + S +SE + S +S+ + S +SE + S +
Sbjct: 116 IQEPPIVISDDDNDDDNGNDLEVPDDNSDDSEAPDDNSDDSEAPDDNSDDSEAPDDNSDD 175
Query: 168 SQVEEPLSQESEMEE 182
S+ + S +S++ +
Sbjct: 176 SEAPDDNSDDSDVPD 190
>gi|148277037 AP2 associated kinase 1 [Homo sapiens]
Length = 961
Score = 49.3 bits (116), Expect = 2e-06
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 13/195 (6%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKT-TKVAKKGKAVRRGRRGKKGAATKMA 60
SP P P KA+EA +K+ + +DP T T +A + + + G
Sbjct: 327 SPIPAKLPEPVKASEAAAKKTQPKARLTDPIPTTETSIAPRQRPKAGQTQPNPGILPIQP 386
Query: 61 AVTAPE---AESGPAAPGPSDQP----SQELPQHELPPEEPVSEGTQHDPLSQESELEEP 113
A+T + + P A G S+QP S P+ + PP +P+ + P + + + P
Sbjct: 387 ALTPRKRATVQPPPQAAGSSNQPGLLASVPQPKPQAPPSQPLPQTQAKQPQAPPTPQQTP 446
Query: 114 LSQES--EVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE 171
+Q + + + Q + L Q+ + ++P + Q Q+ + + +Q+ Q
Sbjct: 447 STQAQGLPAQAQATPQHQQQLFLKQQQQQQQPPPAQQQPAGTFYQQQQAQ---TQQFQAV 503
Query: 172 EPLSQESEMEELPSV 186
P +Q+ + + P V
Sbjct: 504 HPATQQPAIAQFPVV 518
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 48.5 bits (114), Expect = 3e-06
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAV 62
P + P + +++ ++ S P P + T+ + A +R TK A +
Sbjct: 229 PLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADI 288
Query: 63 TAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPL---SQESELEEPLSQESE 119
E+ P+ P PS P Q+ + P ++P E +Q P +Q S L +PL+Q+
Sbjct: 289 VRGESVK-PSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPG 347
Query: 120 VEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
+P Q +P +Q +P +Q++ E+P S++
Sbjct: 348 TVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385
Score = 44.3 bits (103), Expect = 6e-05
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 27/190 (14%)
Query: 10 PPAKATEAGKRKSSSQPSPS----DPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAP 65
PPA+ T ++ SS QP P P T + G A + + T P
Sbjct: 371 PPAQQT-GSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA----KPPTQQVGTPKPLAQQP 425
Query: 66 EAESGPAAPGPSDQPSQELPQHELP---------------PEEPVSE--GTQHDPLSQES 108
+S APGP+ P Q+ ++P P +P S+ G P Q
Sbjct: 426 GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPG 485
Query: 109 ELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQES 168
+ P Q + P SQ+ +P Q+ +P Q+ +P SQ+ +P +Q+
Sbjct: 486 PAKPPPQQPGSAKPP-SQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 169 QVEEPLSQES 178
+P +Q+S
Sbjct: 545 SPAKPSAQQS 554
Score = 43.5 bits (101), Expect = 1e-04
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAA 61
+PKP A P ++ + + P K + A GK ++ TK +
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKT-----SAQQTGPTKPPS 471
Query: 62 VTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVE 121
A+ P PGP+ P Q+ + P ++P S P Q+ +P Q+
Sbjct: 472 QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGST----KPPPQQPGPAKPSPQQPGST 527
Query: 122 EPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVE--EPLSQESQVEEPLSQ 176
+P SQ+ +P +Q+ +P +Q+S +P+SQ + +P + ++P SQ
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQS--TKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 42.0 bits (97), Expect = 3e-04
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 20/182 (10%)
Query: 3 PKPRASGPPAKATEAGKRKS-SSQPSPSDPKKK---TTKVAKKGKAVRRGRRGKKGAAT- 57
P GP A A G K+ + QP P+ P + T K + ++ + T
Sbjct: 381 PSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTP 440
Query: 58 -------KMAAVTAPEAESGPAAPGPSDQPSQ------ELPQHELPPEEPVSEGTQHDPL 104
K+ A A ++ GP+ PSQ PQ P + P + P
Sbjct: 441 VQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPP 500
Query: 105 SQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPL 164
SQ+ +P Q+ +P Q+ +P SQ+ +P +Q+ +P +Q+S +P+
Sbjct: 501 SQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQS--TKPV 558
Query: 165 SQ 166
SQ
Sbjct: 559 SQ 560
Score = 41.2 bits (95), Expect = 5e-04
Identities = 50/215 (23%), Positives = 80/215 (37%), Gaps = 36/215 (16%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKT------TKVAKKGKAVRRGRRGKKGA 55
SP+P+ P T A KSS QP + PKK +K + K ++
Sbjct: 656 SPQPKLKTAPVTTTSAVS-KSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHG 714
Query: 56 ATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELP-----PEEPVSEGTQHDPLSQESEL 110
+ A PEA+S + P P +PS Q + P P++P D +S S
Sbjct: 715 SPSAKAKQPPEADS-LSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSAT 773
Query: 111 EEPLSQESEVEEPLSQESQVEEPLSQES--------------------EVEEPLSQESQV 150
+P S+V+ E + PL +S + P S +
Sbjct: 774 TKPDIPSSKVQS--QAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKII 831
Query: 151 EEP-LSQESEVEEPLSQESQVEEPLSQESEMEELP 184
P S ES+ ++ + + EEP +++M P
Sbjct: 832 SHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKP 866
Score = 30.8 bits (68), Expect = 0.70
Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 27/211 (12%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAK---------KGKAVRRGRRG 51
++PK G + G + Q P + K TTK K K V G+
Sbjct: 1280 VAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDK-TTKTIKEQPQPPCTAKPDQVEPGKEK 1338
Query: 52 --KKGAATKMAAVTAPEAESGPAAPGPSDQPSQ----ELPQHELPPEEPVSEGTQHDPLS 105
K+ + ++ P++ G + G S E+P E+ + +G + D S
Sbjct: 1339 TEKEDDKSDTSSSQQPKSPQGLSDTGYSSDGISSSLGEIPSLIPTDEKDILKGLKKDSFS 1398
Query: 106 QESELEEP---LSQESEVEEPLSQES-----QVEEPLSQESEVEEPLSQESQVEEPLSQE 157
QES P ES V L ++ + E +Q EV ++ + + LS+
Sbjct: 1399 QESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQPHEVSPEQPKDQEKTQSLSET 1458
Query: 158 SEV---EEPLSQESQVEEPLSQESEMEELPS 185
E+ EE + + + + ++ +++PS
Sbjct: 1459 LEITISEEEIKESQEERKDTFKKDSQQDIPS 1489
Score = 30.0 bits (66), Expect = 1.2
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 80 PSQELPQHELPPEEPVSE--GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQE 137
P ++ Q +L E + E + ++E E E Q +E + + ++EE S +
Sbjct: 3205 PEEDKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMVQKKLEELQSMK 3264
Query: 138 SEVEEPLSQESQVEEPLSQESEVEEPLSQE--SQVEEPLSQESEMEELPSV 186
+ +E Q + + QE+ ++ L E Q+++ L Q+ E +++ +
Sbjct: 3265 QHLLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQKIRQI 3315
Score = 28.1 bits (61), Expect = 4.6
Identities = 41/179 (22%), Positives = 63/179 (35%), Gaps = 36/179 (20%)
Query: 1 MSPKPRASG-------PPAKATEAGKRKSSSQPSPSD-----------------PKKKTT 36
MSPKP A PP AG+ + Q SP PK + T
Sbjct: 862 MSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPT 921
Query: 37 KVAKK--GKAVRRGRRGKKGAATKM--AAVTAPEAESGPA-----APGPSDQPSQELPQH 87
+ GK G A+ + A P ++SGP AP PS P+ + P
Sbjct: 922 TPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPK 981
Query: 88 ---ELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 143
+ PP S + + + +E EP ++++ + E + +S EP
Sbjct: 982 STGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEP 1040
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 48.5 bits (114), Expect = 3e-06
Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAV 62
P + P + +++ ++ S P P + T+ + A +R TK A +
Sbjct: 229 PLQQDGTPKSISSQQPEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADI 288
Query: 63 TAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPL---SQESELEEPLSQESE 119
E+ P+ P PS P Q+ + P ++P E +Q P +Q S L +PL+Q+
Sbjct: 289 VRGESVK-PSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPG 347
Query: 120 VEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 157
+P Q +P +Q +P +Q++ E+P S++
Sbjct: 348 TVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385
Score = 44.3 bits (103), Expect = 6e-05
Identities = 46/190 (24%), Positives = 74/190 (38%), Gaps = 27/190 (14%)
Query: 10 PPAKATEAGKRKSSSQPSPS----DPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAP 65
PPA+ T ++ SS QP P P T + G A + + T P
Sbjct: 371 PPAQQT-GSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA----KPPTQQVGTPKPLAQQP 425
Query: 66 EAESGPAAPGPSDQPSQELPQHELP---------------PEEPVSE--GTQHDPLSQES 108
+S APGP+ P Q+ ++P P +P S+ G P Q
Sbjct: 426 GLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPG 485
Query: 109 ELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQES 168
+ P Q + P SQ+ +P Q+ +P Q+ +P SQ+ +P +Q+
Sbjct: 486 PAKPPPQQPGSAKPP-SQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQP 544
Query: 169 QVEEPLSQES 178
+P +Q+S
Sbjct: 545 SPAKPSAQQS 554
Score = 43.5 bits (101), Expect = 1e-04
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAA 61
+PKP A P ++ + + P K + A GK ++ TK +
Sbjct: 417 TPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKT-----SAQQTGPTKPPS 471
Query: 62 VTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVE 121
A+ P PGP+ P Q+ + P ++P S P Q+ +P Q+
Sbjct: 472 QLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGST----KPPPQQPGPAKPSPQQPGST 527
Query: 122 EPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVE--EPLSQESQVEEPLSQ 176
+P SQ+ +P +Q+ +P +Q+S +P+SQ + +P + ++P SQ
Sbjct: 528 KPPSQQPGSAKPSAQQPSPAKPSAQQS--TKPVSQTGSGKPLQPPTVSPSAKQPPSQ 582
Score = 42.0 bits (97), Expect = 3e-04
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 20/182 (10%)
Query: 3 PKPRASGPPAKATEAGKRKS-SSQPSPSDPKKK---TTKVAKKGKAVRRGRRGKKGAAT- 57
P GP A A G K+ + QP P+ P + T K + ++ + T
Sbjct: 381 PSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTP 440
Query: 58 -------KMAAVTAPEAESGPAAPGPSDQPSQ------ELPQHELPPEEPVSEGTQHDPL 104
K+ A A ++ GP+ PSQ PQ P + P + P
Sbjct: 441 VQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPP 500
Query: 105 SQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPL 164
SQ+ +P Q+ +P Q+ +P SQ+ +P +Q+ +P +Q+S +P+
Sbjct: 501 SQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQS--TKPV 558
Query: 165 SQ 166
SQ
Sbjct: 559 SQ 560
Score = 41.2 bits (95), Expect = 5e-04
Identities = 50/215 (23%), Positives = 80/215 (37%), Gaps = 36/215 (16%)
Query: 2 SPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKT------TKVAKKGKAVRRGRRGKKGA 55
SP+P+ P T A KSS QP + PKK +K + K ++
Sbjct: 656 SPQPKLKTAPVTTTSAVS-KSSPQPQQTSPKKDAAPKQDLSKAPEPKKPPPLVKQPTLHG 714
Query: 56 ATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELP-----PEEPVSEGTQHDPLSQESEL 110
+ A PEA+S + P P +PS Q + P P++P D +S S
Sbjct: 715 SPSAKAKQPPEADS-LSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPTTDLVSSSSAT 773
Query: 111 EEPLSQESEVEEPLSQESQVEEPLSQES--------------------EVEEPLSQESQV 150
+P S+V+ E + PL +S + P S +
Sbjct: 774 TKPDIPSSKVQS--QAEEKTTPPLKTDSAKPSQSFPPTGEKVSPFDSKAIPRPASDSKII 831
Query: 151 EEP-LSQESEVEEPLSQESQVEEPLSQESEMEELP 184
P S ES+ ++ + + EEP +++M P
Sbjct: 832 SHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKP 866
Score = 30.8 bits (68), Expect = 0.70
Identities = 44/211 (20%), Positives = 81/211 (38%), Gaps = 27/211 (12%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAK---------KGKAVRRGRRG 51
++PK G + G + Q P + K TTK K K V G+
Sbjct: 1280 VAPKTVQEGKQPQTKMEGLPSGTPQSLPKEDDK-TTKTIKEQPQPPCTAKPDQVEPGKEK 1338
Query: 52 --KKGAATKMAAVTAPEAESGPAAPGPSDQPSQ----ELPQHELPPEEPVSEGTQHDPLS 105
K+ + ++ P++ G + G S E+P E+ + +G + D S
Sbjct: 1339 TEKEDDKSDTSSSQQPKSPQGLSDTGYSSDGISSSLGEIPSLIPTDEKDILKGLKKDSFS 1398
Query: 106 QESELEEP---LSQESEVEEPLSQES-----QVEEPLSQESEVEEPLSQESQVEEPLSQE 157
QES P ES V L ++ + E +Q EV ++ + + LS+
Sbjct: 1399 QESSPSSPSDLAKLESTVLSILEAQASTLADEKSEKKTQPHEVSPEQPKDQEKTQSLSET 1458
Query: 158 SEV---EEPLSQESQVEEPLSQESEMEELPS 185
E+ EE + + + + ++ +++PS
Sbjct: 1459 LEITISEEEIKESQEERKDTFKKDSQQDIPS 1489
Score = 30.0 bits (66), Expect = 1.2
Identities = 23/111 (20%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 80 PSQELPQHELPPEEPVSE--GTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQE 137
P ++ Q +L E + E + ++E E E Q +E + + ++EE S +
Sbjct: 3205 PEEDKQQQQLDLERELLELEKIKQQRFAEELEWERQEIQRFREQEKIMVQKKLEELQSMK 3264
Query: 138 SEVEEPLSQESQVEEPLSQESEVEEPLSQE--SQVEEPLSQESEMEELPSV 186
+ +E Q + + QE+ ++ L E Q+++ L Q+ E +++ +
Sbjct: 3265 QHLLFQQEEERQAQFMMRQETLAQQQLQLEQIQQLQQQLHQQLEEQKIRQI 3315
Score = 28.1 bits (61), Expect = 4.6
Identities = 41/179 (22%), Positives = 63/179 (35%), Gaps = 36/179 (20%)
Query: 1 MSPKPRASG-------PPAKATEAGKRKSSSQPSPSD-----------------PKKKTT 36
MSPKP A PP AG+ + Q SP PK + T
Sbjct: 862 MSPKPDAKPMPKGSPTPPGPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPT 921
Query: 37 KVAKK--GKAVRRGRRGKKGAATKM--AAVTAPEAESGPA-----APGPSDQPSQELPQH 87
+ GK G A+ + A P ++SGP AP PS P+ + P
Sbjct: 922 TPQETVTGKLFGFGASIFSQASNLISTAGQPGPHSQSGPGAPMKQAPAPSQPPTSQGPPK 981
Query: 88 ---ELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 143
+ PP S + + + +E EP ++++ + E + +S EP
Sbjct: 982 STGQAPPAPAKSIPVKKETKAPAAEKLEPKAEQAPTVKRTETEKKPPPIKDSKSLTAEP 1040
>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
Length = 825
Score = 48.5 bits (114), Expect = 3e-06
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 81 SQELPQHELPPE--EPVSEGTQHDPLSQESEL---EEPLSQES--EVEEPLSQESQVEEP 133
+ E P E P E P+ + T + S E +L EP + E+ E PLS+E+ EE
Sbjct: 445 AMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEA 504
Query: 134 LSQESEVEEPLSQESQVEEPLSQE---SEVEEPLSQE-SQVEEPLSQESEMEELPS 185
+EV+ PL++E+ EE ++ + +E P + ++ + PLS+E+ EE P+
Sbjct: 505 ---HAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPA 557
Score = 45.1 bits (105), Expect = 4e-05
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 19/132 (14%)
Query: 64 APEAESGPAAPGPSDQPSQE-------LPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ 116
A EA + +P P + ++E L E P +E +E PLS+E+ EE
Sbjct: 450 AEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEA--RSPLSEETSAEEA--- 504
Query: 117 ESEVEEPLSQESQVEEPLSQ---ESEVEEPLSQ-ESQVEEPLSQESEVEEPLSQESQVEE 172
+EV+ PL++E+ EE ++ + +E P + ++ + PLS+E+ EE ++V+
Sbjct: 505 HAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEE---APAEVQS 561
Query: 173 PLSQESEMEELP 184
P ++ +EE P
Sbjct: 562 PSAKGVSIEEAP 573
Score = 41.6 bits (96), Expect = 4e-04
Identities = 44/183 (24%), Positives = 86/183 (46%), Gaps = 34/183 (18%)
Query: 7 ASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAV--------RRGRRGKKGAATK 58
A PA+A ++S++ +P++ + + K +A + AA +
Sbjct: 535 ADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQ 594
Query: 59 MAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQES 118
+ A T AE PA P P++E P PP P E +E++ P ++E+
Sbjct: 595 LLAATEASAEEAPAEVQPP--PAEEAPAEVQPP--PAEEAP--------AEVQPPPAEEA 642
Query: 119 --EVEEPLSQESQVEEPLSQESEVEEPLSQES--QVEEPLSQES--EVEEPLSQESQVEE 172
EV+ P ++E+ +EV+ P ++E+ +V+ P ++E+ EV+ ++E+ +EE
Sbjct: 643 PAEVQPPPAEEAP--------AEVQPPPAEEAPAEVQPPPAEEAPAEVQSLPAEETPIEE 694
Query: 173 PLS 175
L+
Sbjct: 695 TLA 697
Score = 38.9 bits (89), Expect = 0.003
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 17/189 (8%)
Query: 10 PPAKATEAGKRKSSSQPSPSDPKKKTTKV----AKKGKAVRRGRRGKKG-AATKMAAVTA 64
P + A K+ +S++ P +K K+ ++ A R ++ + +
Sbjct: 241 PVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEET 300
Query: 65 PEAESGPAAPGPSDQ----PSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
P+AE+ A S + P++E P E P E + + +E+ P ++ES
Sbjct: 301 PDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPS 360
Query: 121 EEP----LSQESQVEEPLSQESEVEEPLSQESQVE-EPLSQESEVEEPLSQESQVEEPLS 175
EEP L ++ + E+ P +Q++ +E +PL E +EE ++VE P
Sbjct: 361 EEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEE---APAKVEPPTV 417
Query: 176 QESEMEELP 184
+E+ + P
Sbjct: 418 EETLADVQP 426
Score = 38.9 bits (89), Expect = 0.003
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 36/204 (17%)
Query: 7 ASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPE 66
A+ PPA T A R S+ + ++ + + A +AA+ AP
Sbjct: 479 ATEPPADETPAEARSPLSEETSAE---EAHAEVQSPLAEETTAEEASAEIQLLAAIEAPA 535
Query: 67 AESGPAAPGPSDQPSQELPQHELPPE--EPVSEGT--QHDPLSQESELEEPLSQESEVEE 122
E+ A P S+E E P E P ++G + PL EL+ P +E+ EE
Sbjct: 536 DETPAEAQSPL---SEETSAEEAPAEVQSPSAKGVSIEEAPL----ELQPPSGEETTAEE 588
Query: 123 PLSQ--------------ESQVEEPLSQES--EVEEPLSQES--QVEEPLSQES--EVEE 162
+ ++V+ P ++E+ EV+ P ++E+ +V+ P ++E+ EV+
Sbjct: 589 ASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQP 648
Query: 163 PLSQES--QVEEPLSQESEMEELP 184
P ++E+ +V+ P ++E+ E P
Sbjct: 649 PPAEEAPAEVQPPPAEEAPAEVQP 672
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 48.1 bits (113), Expect = 4e-06
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 90 PPEEPVSEGTQHDPLS--QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQE 147
PP + G + + QE E+E +ESE EE E + E E E +E ++
Sbjct: 69 PPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEED 128
Query: 148 SQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEELPSV 186
S+ E QESE EE +E + E E+E E P +
Sbjct: 129 SEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEI 167
Score = 43.1 bits (100), Expect = 1e-04
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 74 PGPSDQPSQELPQHELPPEEPV-SEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEE 132
P + +E + ++ E + SE + +ESE EE ESE EE ES E
Sbjct: 70 PADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEE----ESETEEESEDESDEES 125
Query: 133 PLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEME 181
E E+E+ QES+ EE +E E E E++ E E EME
Sbjct: 126 EEDSEEEMED--EQESEAEEDNQEEGESE--AEGETEAESEFDPEIEME 170
Score = 39.7 bits (91), Expect = 0.002
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 51 GKKGAATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESEL 110
GK+ A K+ E+E+G + + S+E + E E+ E ++ D E E+
Sbjct: 77 GKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEED---SEEEM 133
Query: 111 EEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 159
E+ QESE EE +E ESE E ES+ + + E+E
Sbjct: 134 ED--EQESEAEEDNQEEG--------ESEAEGETEAESEFDPEIEMEAE 172
Score = 39.7 bits (91), Expect = 0.002
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 96 SEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLS 155
SE + +ESE EE ES+ E E ++E+ QESE EE +E
Sbjct: 99 SESEEESESEEESETEEESEDESDEESEEDSEEEMED--EQESEAEEDNQEEG------- 149
Query: 156 QESEVEEPLSQESQVEEPLSQESE 179
ESE E ES+ + + E+E
Sbjct: 150 -ESEAEGETEAESEFDPEIEMEAE 172
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 47.8 bits (112), Expect = 6e-06
Identities = 44/147 (29%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 66 EAESGPAAPGPSDQPSQELPQHE----LPPEEPVSEGT--------------------QH 101
E E PAAPGP P P LPP + V EGT
Sbjct: 828 EPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSSD 887
Query: 102 DPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPL------SQESQVEEPLS 155
+ +E E EE +E E EE +E + EE +E E EE +E ++EE
Sbjct: 888 EEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947
Query: 156 QESEVEEPLSQESQVEEPLSQESEMEE 182
+E E EE +E + E + E+EE
Sbjct: 948 EEDEEEEEELEEVEDLEFGTAGGEVEE 974
Score = 39.7 bits (91), Expect = 0.002
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 64 APEAESGPAAPGPSDQPSQELPQHELPP------EEPVSEGTQHDPLSQESELEEPLSQE 117
AP + P A P + P + P+ E P EEP GT+ + + + P +
Sbjct: 976 APPPPTLPPALPPPESPPKVQPEPEPEPGLLLEVEEP---GTEEERGADTAPTLAPEALP 1032
Query: 118 SEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQE 177
S+ E ES P QE EEP + + +EE S+ +P E+ EE + E
Sbjct: 1033 SQGEVEREGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQP-PPETPAEEEMETE 1091
Query: 178 SEMEEL 183
+E E L
Sbjct: 1092 TEAEAL 1097
Score = 32.3 bits (72), Expect = 0.24
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 16/122 (13%)
Query: 66 EAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQES---ELEEPLSQESEVEE 122
E E G A P P+ P+ LP E PP+ Q +P + E+EEP ++E +
Sbjct: 971 EVEEG-APPPPTLPPA--LPPPESPPK------VQPEPEPEPGLLLEVEEPGTEEERGAD 1021
Query: 123 PLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
+ + E L + EVE ES P QE EEP + + +EE S+ +
Sbjct: 1022 --TAPTLAPEALPSQGEVER--EGESPAAGPPPQELVEEEPSAPPTLLEEETEDGSDKVQ 1077
Query: 183 LP 184
P
Sbjct: 1078 PP 1079
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 47.8 bits (112), Expect = 6e-06
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 14/168 (8%)
Query: 14 ATEAGKRKSSSQPSPSDPK----KKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAES 69
A K K+SS P P+ P+ + + ++ +A +G A +TA EA +
Sbjct: 22 AARPSKIKASSGP-PTSPEPGELESEPEEEEEEQAASQGGTAADEQAEAPKGLTAAEA-A 79
Query: 70 GPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELE-----EPLSQESEVEEPL 124
G PG +P++ P+ E P E E Q +P + ELE E L Q +E +E
Sbjct: 80 GEEGPGEPGRPAEPQPEPEEPAEVGAEEPAQPEPGAGPEELEAEAGAEELEQAAEGKEVR 139
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE 172
Q S PL++ E E + E++ E +E + EE ++ +E
Sbjct: 140 FQASL---PLTRIDEEEAAAAPEAETERVEGEEEDKEETQRDGAESKE 184
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 47.4 bits (111), Expect = 7e-06
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 4 KPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAA------T 57
KP A G PA +R +S + K K + K+ A+ R R KK +
Sbjct: 393 KPNAGGSPAPVR---RRPEASPVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRA 449
Query: 58 KMAAVTA----PEAESGPAAPGPS-DQPSQELPQ----HELPPEEPVSEGTQHDPLSQES 108
+++A TA P++++ P++P S +P+ P H LPP+ P GT P +
Sbjct: 450 RLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVR 509
Query: 109 ELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLS-QESQVEEPLSQESEVEEP 163
EE ++ES +SQ + S E E P S S P + E+P
Sbjct: 510 RKEE--AKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQP 563
Score = 45.1 bits (105), Expect = 4e-05
Identities = 50/202 (24%), Positives = 76/202 (37%), Gaps = 32/202 (15%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAV 62
P PR + K K ++ PS + P+ K+ ++ RR K+ AA A+
Sbjct: 495 PSPRGTTASPKGRVRRKEEAKESPSAAGPEDKS-------QSKRRASNEKESAAP--ASP 545
Query: 63 TAPEAESGPAAPGPSDQPSQELPQHE---LPPEEPVSEGTQHDPLSQESELEEPL----- 114
A S AP +QP E P P P T P++ ++ EE
Sbjct: 546 APSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAE 605
Query: 115 --SQESEVEEPLSQESQV---------EEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 163
Q E E QE ++ EE L++E+E E + E +E E E
Sbjct: 606 KRRQAREQREREEQERRLQAERDKRMREEQLAREAEAR----AEREAEARRREEQEAREK 661
Query: 164 LSQESQVEEPLSQESEMEELPS 185
E + +E L ++ E E S
Sbjct: 662 AQAEQEEQERLQKQKEEAEARS 683
Score = 31.2 bits (69), Expect = 0.54
Identities = 33/139 (23%), Positives = 48/139 (34%), Gaps = 4/139 (2%)
Query: 48 GRRGKKGAATKMAAV--TAPEAESGPAA-PGPSDQPSQELPQHELPPEEPVSEGTQHDPL 104
G R + GA A V T PE P P P P L + PP+ P +
Sbjct: 4 GPRAELGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVP-DTPPDTPPAMKNATSSK 62
Query: 105 SQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPL 164
E E P Q P +ES E S+ ++++ SQ S P
Sbjct: 63 QLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPA 122
Query: 165 SQESQVEEPLSQESEMEEL 183
S ++ + + E +L
Sbjct: 123 SDSPPTKQEVKKAGERHKL 141
>gi|82830424 gon-4-like isoform a [Homo sapiens]
Length = 2240
Score = 46.6 bits (109), Expect = 1e-05
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 16/184 (8%)
Query: 7 ASGPPAKATEAGKRKSSSQPS--PSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTA 64
++G K T K + SQP+ PS ++ + G V +G K A + M
Sbjct: 1367 SAGEVTKQTVLQKEEERSQPTKTPSSSQEPPDE-GTSGTDVNKG--SSKNALSSMD---- 1419
Query: 65 PEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
PE + PG + S Q P P + G ++ P +E E + L+Q+ E E
Sbjct: 1420 PEVRLS-SPPGKPEDSSSVDGQSVGTPVGPETGGEKNGPEEEEEEDFDDLTQDEEDE--- 1475
Query: 125 SQESQVEEPLSQESEVEEPLSQESQV--EEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
S EE + E++E + + + + E +SQE E EE SQE E +E E E
Sbjct: 1476 -MSSASEESVLSVPELQETMEKLTWLASERRMSQEGESEEENSQEENSEPEEEEEEEAEG 1534
Query: 183 LPSV 186
+ S+
Sbjct: 1535 MESL 1538
Score = 40.0 bits (92), Expect = 0.001
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 41/177 (23%)
Query: 1 MSPKPRASGPPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMA 60
M P+ R S PP K ++ S +P P
Sbjct: 1418 MDPEVRLSSPPGKPEDSSSVDGQSVGTPVGP----------------------------- 1448
Query: 61 AVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEV 120
E+G GP ++ ++ E+ +S ++ LS EL+E + + + +
Sbjct: 1449 -------ETGGEKNGPEEEEEEDFDDLTQDEEDEMSSASEESVLS-VPELQETMEKLTWL 1500
Query: 121 --EEPLSQESQVEEPLSQE--SEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEP 173
E +SQE + EE SQE SE EE +E++ E L +E E+ + +S + P
Sbjct: 1501 ASERRMSQEGESEEENSQEENSEPEEEEEEEAEGMESLQKEDEMTDEAVGDSAEKPP 1557
Score = 37.0 bits (84), Expect = 0.010
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 21/162 (12%)
Query: 15 TEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAESGPAAP 74
T+ K S + S DP+ + + G+ + + T E+G
Sbjct: 1404 TDVNKGSSKNALSSMDPEVRLSSPP--------GKPEDSSSVDGQSVGTPVGPETGGEKN 1455
Query: 75 GPSDQPSQELPQHELPPEEPVSEGTQHDPLS----QES-------ELEEPLSQESEVEEP 123
GP ++ ++ E+ +S ++ LS QE+ E +SQE E EE
Sbjct: 1456 GPEEEEEEDFDDLTQDEEDEMSSASEESVLSVPELQETMEKLTWLASERRMSQEGESEEE 1515
Query: 124 LSQE--SQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 163
SQE S+ EE +E+E E L +E ++ + +S + P
Sbjct: 1516 NSQEENSEPEEEEEEEAEGMESLQKEDEMTDEAVGDSAEKPP 1557
Score = 31.6 bits (70), Expect = 0.41
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 113 PLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEE 172
P+ + +E++ P + +EE S + E + +E + E ES+VE S ++
Sbjct: 347 PIKKANEIKPPQFVDIHLEEDDSSDEEYQPDDEEEDETAEESLLESDVESTASSPRGAKK 406
Query: 173 P-LSQESEMEE 182
L Q SEM E
Sbjct: 407 SRLRQSSEMTE 417
Score = 29.6 bits (65), Expect = 1.6
Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 4/165 (2%)
Query: 25 QPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAESGPAAPGPSDQPSQEL 84
Q + K++ K K K RG+ G K+ + E G + + +
Sbjct: 235 QDNEESEKRRKKKKGTKRKRDGRGQEGTLAYDLKLDDMLDRTLEDGAKQHNLTAVNVRNI 294
Query: 85 PQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVE----EPLSQESEV 140
+ E V+ +++ + EP S+++E + + + P+ + +E+
Sbjct: 295 LHEVITNEHVVAMMKAAISETEDMPMFEPKMTRSKLKEVVEKGVVIPTWNISPIKKANEI 354
Query: 141 EEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEELPS 185
+ P + +EE S + E + +E + E ES++E S
Sbjct: 355 KPPQFVDIHLEEDDSSDEEYQPDDEEEDETAEESLLESDVESTAS 399
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 46.2 bits (108), Expect = 2e-05
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 12 AKATEAGKRKSSSQPSPSDPKKKT----TKVAKKGKA-VRRGRRGKKGAATKMAAVTAPE 66
AK + K KS SP + K K+ + V +KGK+ V + +KG K +P
Sbjct: 605 AKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG---KSPVPKSPV 661
Query: 67 AESG--PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
E G P + P ++ ++ P + P EE S+ ++ E EE +E+ EE +
Sbjct: 662 EEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKAEVGK--GEQKEEEEKEVKEAPKEEKV 718
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE-EPLSQESEMEE 182
++ + + + ++ + E P+ +E+ V E ++ V+ L +E++ E +PL QE E E+
Sbjct: 719 EKKEEKPKDVPEKKKAESPVKEEA-VAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEK 776
Score = 44.7 bits (104), Expect = 5e-05
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 6 RASGPPAKATEAGKRKSSSQPSPSDPKKKT----TKVAKKGKA-VRRGRRGKKGAATKMA 60
+A P K+ K KS SP + K K+ + V +KGK+ V + +KG +
Sbjct: 612 KAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSK 671
Query: 61 AVTAPEAESG-PAAPGPSDQPSQELPQHELPPEEP--VSEGTQHDPLSQESELEEPLSQE 117
+ +A+S P +P + E+ + E EE V E + + + ++ E + + ++
Sbjct: 672 SPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEK 731
Query: 118 SEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE-EPLSQESEVEEPLSQESQVEE 172
+ E P+ +E+ V E ++ V+ L +E++ E +PL QE E E+ + EE
Sbjct: 732 KKAESPVKEEA-VAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEE 786
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 40 KKGKAVRRGRRGKKGAATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGT 99
+K +A + ++AA +P + P + +E Q E EE EG
Sbjct: 487 EKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEE---EEEEDEGA 543
Query: 100 QHDPLSQESELEEPLSQESEVEEPLSQ---ESQVEEPLSQESEVEEPLSQESQVEEPLSQ 156
+ D + +E S++ E E+ + E++ EE ++E + E S+E +E L
Sbjct: 544 KSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVA 603
Query: 157 ESEVEEPLSQESQVEEPLSQESEMEELP 184
+++VE+P +S V + +E +P
Sbjct: 604 DAKVEKPEKAKSPVPKSPVEEKGKSPVP 631
Score = 33.1 bits (74), Expect = 0.14
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 17/92 (18%)
Query: 102 DPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEV- 160
+ + +E+++E+ ++SE+EE L + + E L+ + E+ + E + EEP ++E EV
Sbjct: 454 EEIIEETKVED---EKSEMEEAL---TAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVA 507
Query: 161 ----------EEPLSQESQVEEPLSQESEMEE 182
E +E + EE QE E EE
Sbjct: 508 AKKSPVKATAPEVKEEEGEKEEEEGQEEEEEE 539
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 46.2 bits (108), Expect = 2e-05
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 15/179 (8%)
Query: 12 AKATEAGKRKSSSQPSPSDPKKKT----TKVAKKGKA-VRRGRRGKKGAATKMAAVTAPE 66
AK + K KS SP + K K+ + V +KGK+ V + +KG K +P
Sbjct: 229 AKVEKPEKAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKG---KSPVPKSPV 285
Query: 67 AESG--PAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPL 124
E G P + P ++ ++ P + P EE S+ ++ E EE +E+ EE +
Sbjct: 286 EEKGKSPVSKSPVEEKAKS-PVPKSPVEEAKSKAEVGK--GEQKEEEEKEVKEAPKEEKV 342
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE-EPLSQESEMEE 182
++ + + + ++ + E P+ +E+ V E ++ V+ L +E++ E +PL QE E E+
Sbjct: 343 EKKEEKPKDVPEKKKAESPVKEEA-VAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEK 400
Score = 44.7 bits (104), Expect = 5e-05
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 10/176 (5%)
Query: 6 RASGPPAKATEAGKRKSSSQPSPSDPKKKT----TKVAKKGKA-VRRGRRGKKGAATKMA 60
+A P K+ K KS SP + K K+ + V +KGK+ V + +KG +
Sbjct: 236 KAKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSK 295
Query: 61 AVTAPEAESG-PAAPGPSDQPSQELPQHELPPEEP--VSEGTQHDPLSQESELEEPLSQE 117
+ +A+S P +P + E+ + E EE V E + + + ++ E + + ++
Sbjct: 296 SPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEVKEAPKEEKVEKKEEKPKDVPEK 355
Query: 118 SEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE-EPLSQESEVEEPLSQESQVEE 172
+ E P+ +E+ V E ++ V+ L +E++ E +PL QE E E+ + EE
Sbjct: 356 KKAESPVKEEA-VAEVVTITKSVKVHLEKETKEEGKPLQQEKEKEKAGGEGGSEEE 410
Score = 41.6 bits (96), Expect = 4e-04
Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 6/148 (4%)
Query: 40 KKGKAVRRGRRGKKGAATKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGT 99
+K +A + ++AA +P + P + +E Q E EE EG
Sbjct: 111 EKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEE---EEEEDEGA 167
Query: 100 QHDPLSQESELEEPLSQESEVEEPLSQ---ESQVEEPLSQESEVEEPLSQESQVEEPLSQ 156
+ D + +E S++ E E+ + E++ EE ++E + E S+E +E L
Sbjct: 168 KSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEKSEEVATKEELVA 227
Query: 157 ESEVEEPLSQESQVEEPLSQESEMEELP 184
+++VE+P +S V + +E +P
Sbjct: 228 DAKVEKPEKAKSPVPKSPVEEKGKSPVP 255
Score = 33.1 bits (74), Expect = 0.14
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 17/92 (18%)
Query: 102 DPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEV- 160
+ + +E+++E+ ++SE+EE L + + E L+ + E+ + E + EEP ++E EV
Sbjct: 78 EEIIEETKVED---EKSEMEEAL---TAITEELAVSMKEEKKEAAEEKEEEPEAEEEEVA 131
Query: 161 ----------EEPLSQESQVEEPLSQESEMEE 182
E +E + EE QE E EE
Sbjct: 132 AKKSPVKATAPEVKEEEGEKEEEEGQEEEEEE 163
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 32/187 (17%)
Query: 20 RKSSSQPSPSDPKKKTTKVAKKGKAVRRGRR--------GKKGA---------ATKMAAV 62
RK + SP +P T KKG + R+ G+K + A V
Sbjct: 1129 RKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPGFKLSREIMPVSTQACV 1188
Query: 63 TAPEAESGPAAPGPSDQPSQEL--PQHELP-PEEPVSEGTQHDPLSQESELEEPLSQESE 119
P A P Q S+E P+ ++P PEE E +E + E ++E E
Sbjct: 1189 IEPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEE--------EEMQAEAEEAEEGE 1240
Query: 120 VEEPLSQESQVEEPL----SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLS 175
E+ S E P S E+E +EP +E + + +S+E E QE + EP
Sbjct: 1241 EEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEE 1300
Query: 176 QESEMEE 182
+E E
Sbjct: 1301 EEDAAAE 1307
Score = 40.4 bits (93), Expect = 9e-04
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 10 PPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAES 69
P + +E P P + K++ A+ +A ++G A+ P A
Sbjct: 1202 PKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEA-------EEGEEEDAASSEVPAASP 1254
Query: 70 GPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQ 129
++ P + + P+ E E+P Q ++ ELEEP +E EE + E+
Sbjct: 1255 ADSSNSPETETKE--PEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEE---EEDAAAETA 1309
Query: 130 VEEPLSQESEVEEPL--SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
+ + E + L +++ ++EE ++E EEP QES ++ + + E
Sbjct: 1310 QNDDHDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSRE 1361
Score = 36.2 bits (82), Expect = 0.017
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 24/134 (17%)
Query: 66 EAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEP-L 124
E E A + ++ E+P P + ++E E+EE E E+P +
Sbjct: 1226 EEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEE------EEEKPRV 1279
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPL-----------------SQESEVEEPLSQE 167
S+E + E QE E EP +E E +++ E+EE ++E
Sbjct: 1280 SEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRE 1339
Query: 168 SQVEEPLSQESEME 181
EEP QES ++
Sbjct: 1340 DVKEEPGVQESFLD 1353
Score = 35.0 bits (79), Expect = 0.037
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 92 EEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE 151
E+P E + +P QES L+ + + E + + +E +SE E+P S V
Sbjct: 1334 EQPTREDVKEEPGVQESFLDANMQKSRE-------KIKDKEETELDSEEEQPSHDTSVVS 1386
Query: 152 EPLSQESEVEEPLSQESQVEEPLSQESEMEELP 184
E ++ + E ++S +E L + E EE+P
Sbjct: 1387 EQMAGSEDDHE---EDSHTKEELIELKEEEEIP 1416
Score = 31.2 bits (69), Expect = 0.54
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 118 SEVEEPLSQESQVEEPLSQESEVE----EPLSQESQVEEPLSQES----EVEEPLSQESQ 169
SE EE ++E + EEP QE E+E + +S E++ ++ S ES EV P+S
Sbjct: 787 SEEEEEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRL 846
Query: 170 VEEPLSQES 178
++ L +S
Sbjct: 847 SKQVLPHDS 855
Score = 29.3 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 92 EEPVSEGTQHDPLSQESELE----EPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQE 147
EE EG +P QE ELE + +S E++ ++ S ES+ ++ EV P+S
Sbjct: 791 EEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESE------KKPEVMAPVSST 844
Query: 148 SQVEEPLSQES 158
++ L +S
Sbjct: 845 RLSKQVLPHDS 855
Score = 28.1 bits (61), Expect = 4.6
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 65 PEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ 116
P P P P QP+ + P + P++ Q P + + PLSQ
Sbjct: 1653 PPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQ 1704
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 32/187 (17%)
Query: 20 RKSSSQPSPSDPKKKTTKVAKKGKAVRRGRR--------GKKGA---------ATKMAAV 62
RK + SP +P T KKG + R+ G+K + A V
Sbjct: 1129 RKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPGFKLSREIMPVSTQACV 1188
Query: 63 TAPEAESGPAAPGPSDQPSQEL--PQHELP-PEEPVSEGTQHDPLSQESELEEPLSQESE 119
P A P Q S+E P+ ++P PEE E +E + E ++E E
Sbjct: 1189 IEPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEE--------EEMQAEAEEAEEGE 1240
Query: 120 VEEPLSQESQVEEPL----SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLS 175
E+ S E P S E+E +EP +E + + +S+E E QE + EP
Sbjct: 1241 EEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEE 1300
Query: 176 QESEMEE 182
+E E
Sbjct: 1301 EEDAAAE 1307
Score = 40.4 bits (93), Expect = 9e-04
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 10 PPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAES 69
P + +E P P + K++ A+ +A ++G A+ P A
Sbjct: 1202 PKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEA-------EEGEEEDAASSEVPAASP 1254
Query: 70 GPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQ 129
++ P + + P+ E E+P Q ++ ELEEP +E EE + E+
Sbjct: 1255 ADSSNSPETETKE--PEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEE---EEDAAAETA 1309
Query: 130 VEEPLSQESEVEEPL--SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
+ + E + L +++ ++EE ++E EEP QES ++ + + E
Sbjct: 1310 QNDDHDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSRE 1361
Score = 36.2 bits (82), Expect = 0.017
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 24/134 (17%)
Query: 66 EAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEP-L 124
E E A + ++ E+P P + ++E E+EE E E+P +
Sbjct: 1226 EEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEE------EEEKPRV 1279
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPL-----------------SQESEVEEPLSQE 167
S+E + E QE E EP +E E +++ E+EE ++E
Sbjct: 1280 SEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRE 1339
Query: 168 SQVEEPLSQESEME 181
EEP QES ++
Sbjct: 1340 DVKEEPGVQESFLD 1353
Score = 35.0 bits (79), Expect = 0.037
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 92 EEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE 151
E+P E + +P QES L+ + + E + + +E +SE E+P S V
Sbjct: 1334 EQPTREDVKEEPGVQESFLDANMQKSRE-------KIKDKEETELDSEEEQPSHDTSVVS 1386
Query: 152 EPLSQESEVEEPLSQESQVEEPLSQESEMEELP 184
E ++ + E ++S +E L + E EE+P
Sbjct: 1387 EQMAGSEDDHE---EDSHTKEELIELKEEEEIP 1416
Score = 31.2 bits (69), Expect = 0.54
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 118 SEVEEPLSQESQVEEPLSQESEVE----EPLSQESQVEEPLSQES----EVEEPLSQESQ 169
SE EE ++E + EEP QE E+E + +S E++ ++ S ES EV P+S
Sbjct: 787 SEEEEEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRL 846
Query: 170 VEEPLSQES 178
++ L +S
Sbjct: 847 SKQVLPHDS 855
Score = 29.3 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 92 EEPVSEGTQHDPLSQESELE----EPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQE 147
EE EG +P QE ELE + +S E++ ++ S ES+ ++ EV P+S
Sbjct: 791 EEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESE------KKPEVMAPVSST 844
Query: 148 SQVEEPLSQES 158
++ L +S
Sbjct: 845 RLSKQVLPHDS 855
Score = 28.1 bits (61), Expect = 4.6
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 65 PEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ 116
P P P P QP+ + P + P++ Q P + + PLSQ
Sbjct: 1653 PPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQ 1704
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 46.2 bits (108), Expect = 2e-05
Identities = 49/187 (26%), Positives = 73/187 (39%), Gaps = 32/187 (17%)
Query: 20 RKSSSQPSPSDPKKKTTKVAKKGKAVRRGRR--------GKKGA---------ATKMAAV 62
RK + SP +P T KKG + R+ G+K + A V
Sbjct: 1129 RKRDVKNSPLEPDTSTPLKKKKGWPKGKSRKPIHWKKRPGRKPGFKLSREIMPVSTQACV 1188
Query: 63 TAPEAESGPAAPGPSDQPSQEL--PQHELP-PEEPVSEGTQHDPLSQESELEEPLSQESE 119
P A P Q S+E P+ ++P PEE E +E + E ++E E
Sbjct: 1189 IEPIVSIPKAGRKPKIQESEETVEPKEDMPLPEERKEE--------EEMQAEAEEAEEGE 1240
Query: 120 VEEPLSQESQVEEPL----SQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLS 175
E+ S E P S E+E +EP +E + + +S+E E QE + EP
Sbjct: 1241 EEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEE 1300
Query: 176 QESEMEE 182
+E E
Sbjct: 1301 EEDAAAE 1307
Score = 40.4 bits (93), Expect = 9e-04
Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 14/172 (8%)
Query: 10 PPAKATEAGKRKSSSQPSPSDPKKKTTKVAKKGKAVRRGRRGKKGAATKMAAVTAPEAES 69
P + +E P P + K++ A+ +A ++G A+ P A
Sbjct: 1202 PKIQESEETVEPKEDMPLPEERKEEEEMQAEAEEA-------EEGEEEDAASSEVPAASP 1254
Query: 70 GPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQ 129
++ P + + P+ E E+P Q ++ ELEEP +E EE + E+
Sbjct: 1255 ADSSNSPETETKE--PEVEEEEEKPRVSEEQRQSEEEQQELEEPEPEE---EEDAAAETA 1309
Query: 130 VEEPLSQESEVEEPL--SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESE 179
+ + E + L +++ ++EE ++E EEP QES ++ + + E
Sbjct: 1310 QNDDHDADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSRE 1361
Score = 36.2 bits (82), Expect = 0.017
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 24/134 (17%)
Query: 66 EAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEP-L 124
E E A + ++ E+P P + ++E E+EE E E+P +
Sbjct: 1226 EEEMQAEAEEAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEE------EEEKPRV 1279
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPL-----------------SQESEVEEPLSQE 167
S+E + E QE E EP +E E +++ E+EE ++E
Sbjct: 1280 SEEQRQSEEEQQELEEPEPEEEEDAAAETAQNDDHDADDEDDGHLESTKKKELEEQPTRE 1339
Query: 168 SQVEEPLSQESEME 181
EEP QES ++
Sbjct: 1340 DVKEEPGVQESFLD 1353
Score = 35.0 bits (79), Expect = 0.037
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 92 EEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE 151
E+P E + +P QES L+ + + E + + +E +SE E+P S V
Sbjct: 1334 EQPTREDVKEEPGVQESFLDANMQKSRE-------KIKDKEETELDSEEEQPSHDTSVVS 1386
Query: 152 EPLSQESEVEEPLSQESQVEEPLSQESEMEELP 184
E ++ + E ++S +E L + E EE+P
Sbjct: 1387 EQMAGSEDDHE---EDSHTKEELIELKEEEEIP 1416
Score = 31.2 bits (69), Expect = 0.54
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 118 SEVEEPLSQESQVEEPLSQESEVE----EPLSQESQVEEPLSQES----EVEEPLSQESQ 169
SE EE ++E + EEP QE E+E + +S E++ ++ S ES EV P+S
Sbjct: 787 SEEEEEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESEKKPEVMAPVSSTRL 846
Query: 170 VEEPLSQES 178
++ L +S
Sbjct: 847 SKQVLPHDS 855
Score = 29.3 bits (64), Expect = 2.0
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 92 EEPVSEGTQHDPLSQESELE----EPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQE 147
EE EG +P QE ELE + +S E++ ++ S ES+ ++ EV P+S
Sbjct: 791 EEEAEEGENEEPQCQERELEISVGKSVSHENKEQDSYSVESE------KKPEVMAPVSST 844
Query: 148 SQVEEPLSQES 158
++ L +S
Sbjct: 845 RLSKQVLPHDS 855
Score = 28.1 bits (61), Expect = 4.6
Identities = 14/52 (26%), Positives = 21/52 (40%)
Query: 65 PEAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQ 116
P P P P QP+ + P + P++ Q P + + PLSQ
Sbjct: 1653 PPPPQQPQPPPPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQQQPPLSQ 1704
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 46.2 bits (108), Expect = 2e-05
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 22/178 (12%)
Query: 3 PKPRASGPPAKATEAGKRKSSSQPSP--------SDP-KKKTTKVAKKGKAVRRGRRGKK 53
PKP T G R SS++ S P KK + K+ + R+ + G+K
Sbjct: 979 PKPEKVYKSKSETRWGPRPSSNRREEVNDRPVRRSGPIKKPVLRDMKEEREQRKEKEGEK 1038
Query: 54 GAATKMAAVTAP---EAESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESEL 110
V P E + P P P P+ PQ PP +P +E P ++ + L
Sbjct: 1039 AEKVTEKVVVKPEKTEKKDLPPPPPPPQPPAPIQPQSVPPPIQPEAE---KFPSTETATL 1095
Query: 111 EEPLSQESEVEEPLSQESQVE-EP----LSQESEVEEPLSQESQVEEPLSQESEVEEP 163
+ SQ++ E+PL S V+ EP ++Q++ + +E Q E+ +S++ +E P
Sbjct: 1096 AQKPSQDT--EKPLEPVSTVQVEPAVKTVNQQTMAAPVVKEEKQPEKVISKDLVIERP 1151
Score = 38.1 bits (87), Expect = 0.004
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 82 QELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQESEVE 141
+EL + + E E + +E ELE+ ++ E+E+ QE + E +E E E
Sbjct: 517 KELEKEQEQEREKEREKDRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKE 576
Query: 142 EPLSQESQVEEPLSQESE-VEEPLSQESQVEEPLSQESEME 181
+E + E L +E E +EE + EP+ ++ E E
Sbjct: 577 LQKMKEQEKECELEKEREKLEEKIEPREPNLEPMVEKQESE 617
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 78 DQPSQELPQHELPPE-EPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLSQ 136
D+ Q+ + EL E E E + +E ELE +E E+++ QE + E +
Sbjct: 534 DRERQQEKEKELEKEQEKQREMEKERKQEKEKELERQKEKEKELQKMKEQEKECELEKER 593
Query: 137 ESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPL-----SQESEMEELPSV 186
E ++EE + EP+ ++ E E ++E EEP+ S SE E P V
Sbjct: 594 E-KLEEKIEPREPNLEPMVEKQESENSCNKE---EEPVFTRQDSNRSEKEATPVV 644
>gi|156071476 hypothetical protein LOC401137 [Homo sapiens]
Length = 219
Score = 46.2 bits (108), Expect = 2e-05
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Query: 67 AESGPAAPGPSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQ 126
A + PAAP + +P+ P P + G P++ E E P+ E E P++
Sbjct: 120 AAAAPAAPPIAAEPAAAAPLTATPVAAEPAAGA---PVAAEPAAEAPVGAEPAAEAPVAA 176
Query: 127 ESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQ 169
E E P+ E EEP E +P + E L Q +Q
Sbjct: 177 EPAAEAPVGVEPAAEEPSPAEPATAKPAAPEPHPSPSLEQANQ 219
Score = 33.5 bits (75), Expect = 0.11
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 9/107 (8%)
Query: 76 PSDQPSQELPQHELPPEEPVSEGTQHDPLSQESELEEPLSQESEVEEPLSQESQVEEPLS 135
P PS+ P P++ +P + P++ E P++ E E P+
Sbjct: 110 PFVPPSRFFSAAAAPAAPPIAA----EPAAAAPLTATPVAAEPAAGAPVAAEPAAEAPVG 165
Query: 136 QESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEMEE 182
E E P++ E E P+ E EEP EP + + E
Sbjct: 166 AEPAAEAPVAAEPAAEAPVGVEPAAEEP-----SPAEPATAKPAAPE 207
>gi|239746922 PREDICTED: similar to cancer/testis antigen family
147, member B1 isoform 2 [Homo sapiens]
Length = 294
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 20/154 (12%)
Query: 38 VAKKGKAVRRGRRGKKGAATKMAAVTAPEAESGPAAPGPSD------QPSQELPQHELPP 91
+ +G + R RR + ++ + G A GP Q + +P+ E+P
Sbjct: 136 IRMRGGRLMRRRRTAAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPA 195
Query: 92 E------EPVSEGTQHDPLSQ--ESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 143
+ EP E + P + E EL E ++E EEP ++E EEP ++E+ E
Sbjct: 196 DLAEMAREPAEEPAEEKPTEEAAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEE 255
Query: 144 LSQ------ESQVEEPLSQESEVEEPLSQESQVE 171
+++ + + ++ +E + E+ E++V+
Sbjct: 256 VTKYQHEKWDEEAQDAAGKEEKEEKEKDAENKVK 289
Score = 40.4 bits (93), Expect = 9e-04
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 72 AAPGPSDQPSQELPQHELPPEEPVSEGT-----QHDPLSQESELEEPLSQESE--VEEPL 124
AAP S++P L L EG Q L E E+ L++ + EEP
Sbjct: 150 AAPSGSEEPRLLLVHERLGVGAAGPEGEGLGLLQEAALVPEPEVPADLAEMAREPAEEP- 208
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQ 176
++E EE + E E+ E ++E EEP ++E EEP ++E+ E +++
Sbjct: 209 AEEKPTEE--AAEEELAEEAAEEPAKEEPAAEEESAEEPATEEAAAPEEVTK 258
>gi|239745855 PREDICTED: hypothetical protein XP_002343606 [Homo
sapiens]
Length = 870
Score = 45.8 bits (107), Expect = 2e-05
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 57 TKMAAVTAPEAESGPAAPGPSDQPSQELPQHELPP---EEPVSEGTQHDPLSQESELEEP 113
+ M ++T P E PG DQ LP + P E ++ ++ S +++ E P
Sbjct: 268 SSMESLTLPNHEVSVQPPG-EDQAYYHLPNITVKPADVEVTITSEPTNETESSQAQQETP 326
Query: 114 LSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEP 173
+ EVE +Q+ EP E E +S++ Q +P EVE L+Q+ +P
Sbjct: 327 IQFPEEVEPSATQQEAPIEPPVSPMEHELSISEQQQPVQPSESSREVESSLTQQETPGQP 386
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 68 ESGPAAPGPSDQPSQELPQHELPPEEP-VSEGTQHDP--LSQESELEEPLSQESEVEEPL 124
+ PA P S S LP HE+ + P + H P + +++E ++ E E
Sbjct: 259 QEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPNITVKPADVEVTITSEP-TNETE 317
Query: 125 SQESQVEEPLSQESEVEEPLSQESQVEEP----------LSQESEVEEPLSQESQVEEPL 174
S ++Q E P+ EVE +Q+ EP +S++ + +P +VE L
Sbjct: 318 SSQAQQETPIQFPEEVEPSATQQEAPIEPPVSPMEHELSISEQQQPVQPSESSREVESSL 377
Query: 175 SQESEMEELP 184
+Q+ + P
Sbjct: 378 TQQETPGQPP 387
Score = 30.0 bits (66), Expect = 1.2
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 86 QHELPPEEPVSEGTQHDPLS--QESELEEPLSQESEVEEPLSQESQVEEPLSQESEVEEP 143
QH PP P S + PL+ QE+ + P +E P QE+ E P + E
Sbjct: 455 QHGGPPLLPESS-EEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSL 513
Query: 144 LSQESQVEEPLSQESEVEEP 163
QE+ + P V +P
Sbjct: 514 THQEAPAQTPEFPNVVVAQP 533
Score = 28.5 bits (62), Expect = 3.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 114 LSQESEVEEPLS--QESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVE 171
L + SE PL+ QE+ + P +E P QE+ E P + E QE+ +
Sbjct: 462 LPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQ 521
Query: 172 EP 173
P
Sbjct: 522 TP 523
Score = 27.7 bits (60), Expect = 5.9
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 2/72 (2%)
Query: 104 LSQESELEEPLS--QESEVEEPLSQESQVEEPLSQESEVEEPLSQESQVEEPLSQESEVE 161
L + SE PL+ QE+ + P ++ P QE+ E P + E QE+ +
Sbjct: 462 LPESSEEAGPLAVQQETSFQSPEPINNENPSPTQQEAAAEHPQTAEEGESSLTHQEAPAQ 521
Query: 162 EPLSQESQVEEP 173
P V +P
Sbjct: 522 TPEFPNVVVAQP 533
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.292 0.114 0.295
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,270,271
Number of Sequences: 37866
Number of extensions: 528054
Number of successful extensions: 9107
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 944
Number of HSP's that attempted gapping in prelim test: 4081
Number of HSP's gapped (non-prelim): 4306
length of query: 186
length of database: 18,247,518
effective HSP length: 96
effective length of query: 90
effective length of database: 14,612,382
effective search space: 1315114380
effective search space used: 1315114380
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.