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Search of human proteins with 48675811
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48675811 immediate early response 2 [Homo sapiens]
(223 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48675811 immediate early response 2 [Homo sapiens] 444 e-125
gi|142976757 immediate early response 5 [Homo sapiens] 83 2e-16
gi|148727370 immediate early response 5-like [Homo sapiens] 55 6e-08
gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 41 7e-04
gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 41 7e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 40 0.001
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 39 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 39 0.005
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 39 0.005
gi|195947369 junction-mediating and regulatory protein [Homo sap... 38 0.006
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 38 0.008
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 37 0.014
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 37 0.014
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 37 0.014
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 37 0.018
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 37 0.018
gi|156564384 deltex 2 isoform a [Homo sapiens] 37 0.018
gi|156564382 deltex 2 isoform a [Homo sapiens] 37 0.018
gi|156564380 deltex 2 isoform a [Homo sapiens] 37 0.018
gi|189181750 human immunodeficiency virus type I enhancer bindin... 37 0.018
gi|116089331 human immunodeficiency virus type I enhancer bindin... 37 0.018
gi|115511030 hypothetical protein LOC115004 [Homo sapiens] 37 0.018
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 36 0.023
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 36 0.023
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 36 0.023
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 36 0.023
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 36 0.030
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 36 0.030
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 35 0.039
>gi|48675811 immediate early response 2 [Homo sapiens]
Length = 223
Score = 444 bits (1142), Expect = e-125
Identities = 223/223 (100%), Positives = 223/223 (100%)
Query: 1 MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEALEPEVS 60
MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEALEPEVS
Sbjct: 1 MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEALEPEVS 60
Query: 61 LPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSR 120
LPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSR
Sbjct: 61 LPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSR 120
Query: 121 KRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARVLQR 180
KRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARVLQR
Sbjct: 121 KRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARVLQR 180
Query: 181 RFSGLLNCSPAAPPTAPPACEAKPACRPADSMLNVLVRAVVAF 223
RFSGLLNCSPAAPPTAPPACEAKPACRPADSMLNVLVRAVVAF
Sbjct: 181 RFSGLLNCSPAAPPTAPPACEAKPACRPADSMLNVLVRAVVAF 223
>gi|142976757 immediate early response 5 [Homo sapiens]
Length = 327
Score = 83.2 bits (204), Expect = 2e-16
Identities = 65/213 (30%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 1 MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEALEPEVS 60
ME + EA RI+++S+ K+Y+SR+QRGG++LH++L +SLV+RSAR++YLS L ++
Sbjct: 1 MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGL--YLA 58
Query: 61 LPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPR---PAK 117
PA P+ P P E + + P + P E +S APR
Sbjct: 59 GPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVP 118
Query: 118 VSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAEGAFPNLARV 177
V+ + GG+A + +R+E + A R A G FP ++R
Sbjct: 119 VATVTGVGDVFQGGEADATEAAWSRVE-------GPRQAAAREAEGTAGGWGVFPEVSRA 171
Query: 178 LQRRFSGLLN-----CSPAAPPTAPPACEAKPA 205
+R L +PAA P A C +PA
Sbjct: 172 ARRPCGCPLGGEDPPGTPAATPRAACCCAPQPA 204
Score = 47.4 bits (111), Expect = 1e-05
Identities = 49/191 (25%), Positives = 73/191 (38%), Gaps = 43/191 (22%)
Query: 70 RLHPPREAESTAETATPDGEHPFPE-----------PMDTQEAP----TAEETSACCAPR 114
R+ PR+A + T G FPE P+ ++ P + CCAP+
Sbjct: 143 RVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPLGGEDPPGTPAATPRAACCCAPQ 202
Query: 115 PAK--------VSRKRRSSSLSDGGDAGL-----VPSKKARLEEKEEEEGASSEVADRLQ 161
PA+ V ++R ++ GG AG P KK R ++ G + A+ ++
Sbjct: 203 PAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLKKPRRNLEQPPSGGEDDDAEEME 262
Query: 162 PPPAQAEGAFPNLARVLQRRFSGLLNCSPA-------APPTAPPACEAKPAC--RPADSM 212
G NL + FSGLL SP + P A E C +P
Sbjct: 263 ------TGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPEAAEPGQICCDKPVLRD 316
Query: 213 LNVLVRAVVAF 223
+N A+VAF
Sbjct: 317 MNPWSTAIVAF 327
>gi|148727370 immediate early response 5-like [Homo sapiens]
Length = 404
Score = 54.7 bits (130), Expect = 6e-08
Identities = 25/55 (45%), Positives = 42/55 (76%)
Query: 1 MEVQKEAQRIMTLSVWKMYHSRMQRGGLRLHRSLQLSLVMRSARELYLSAKVEAL 55
ME +AQ ++++S+ K++ SR QRGG++LH++L +S V+R+AR+LYLS + L
Sbjct: 1 MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAEL 55
>gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo
sapiens]
Length = 870
Score = 41.2 bits (95), Expect = 7e-04
Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 57 PEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQE------APTAEETSAC 110
P S A PS + P ++ T E +P P P P E AP+ A
Sbjct: 690 PPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARAR 749
Query: 111 CAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQP-PPAQAEG 169
APRP +RRS + + L + + E A R +P PP +A+
Sbjct: 750 AAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKR 809
Query: 170 AFPNLARVLQRRFSGLLNCSPAAPPTAPPACE 201
+ P PA+P APPA E
Sbjct: 810 SVP-----------------PASPARAPPATE 824
>gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo
sapiens]
Length = 865
Score = 41.2 bits (95), Expect = 7e-04
Identities = 40/152 (26%), Positives = 55/152 (36%), Gaps = 24/152 (15%)
Query: 57 PEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQE------APTAEETSAC 110
P S A PS + P ++ T E +P P P P E AP+ A
Sbjct: 685 PPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPRARAR 744
Query: 111 CAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQP-PPAQAEG 169
APRP +RRS + + L + + E A R +P PP +A+
Sbjct: 745 AAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRAEVALGAQGPREKPAPPQKAKR 804
Query: 170 AFPNLARVLQRRFSGLLNCSPAAPPTAPPACE 201
+ P PA+P APPA E
Sbjct: 805 SVP-----------------PASPARAPPATE 819
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 40.4 bits (93), Expect = 0.001
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 42/176 (23%)
Query: 59 VSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAE---------ETSA 109
+ LP + SD L P EA+ T+E T + + P P QE TAE TS+
Sbjct: 2652 LELPPSAASDEPLQEPLEADRTSEELT-EAKTPTSSPEKPQELVTAEVAAPSTSSSATSS 2710
Query: 110 CCAPRPAKVSRKRRSSSLSDGGDA----GLVPSKKAR----------LEEKE------EE 149
P PA+ R+R S+ + G G P K +EEKE ++
Sbjct: 2711 PEGPSPARPPRRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQ 2770
Query: 150 EGASSEVADRLQPPPAQAEGAFPNLARVLQRRFSGLLNCSPAAPPTAPPACEAKPA 205
GA+S + P A P V R SG ++PP P CEA P+
Sbjct: 2771 RGAASTLV-----PGVSETSASPGSPSV--RSMSG----PESSPPIGGP-CEAAPS 2814
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 38.9 bits (89), Expect = 0.004
Identities = 51/165 (30%), Positives = 64/165 (38%), Gaps = 15/165 (9%)
Query: 48 LSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEET 107
LS+ L P PAA S P PR E A P G H P P Q+AP+ T
Sbjct: 355 LSSAASGLAPYP--PAACLSTPYSSIPRGREK----AGPMGSHQGPGPPPCQKAPSGLVT 408
Query: 108 SACCAPRPAKVSRKRRSSSLSD-GGDAGLVPSKKARL----EEKEEEEGASSEVADRLQP 162
S C AP S+K + S GL P +KA K A S+ A + P
Sbjct: 409 S-CKAPFLVDQSQKLPAVPASSWKPPPGLAPPQKAPAASAPPRKAPAVPAPSQKAPAV-P 466
Query: 163 PPAQAEGAFPNLARVLQRRFSGLLNCS--PAAPPTAPPACEAKPA 205
P+Q A P +R + S PA P PP + P+
Sbjct: 467 APSQKAPAIPAPSRKASAASASPRKASAVPAPPQKTPPPSQKAPS 511
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 38.5 bits (88), Expect = 0.005
Identities = 35/160 (21%), Positives = 64/160 (40%), Gaps = 9/160 (5%)
Query: 57 PEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPA 116
PE S + P + + PP E + + P+ FP ++ +P EE+ P +
Sbjct: 567 PEASRLSPPPEESPMSPP--PEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEAS 624
Query: 117 KVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE-GAFPNLA 175
++S S +S P + E + V RL PPP ++ P +
Sbjct: 625 RLSPPPEDSPMSPP------PEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEES 678
Query: 176 RVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPADSMLNV 215
+ L+ P PT+PP ++ + P DS++++
Sbjct: 679 PTSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSL 718
Score = 36.2 bits (82), Expect = 0.023
Identities = 44/171 (25%), Positives = 64/171 (37%), Gaps = 16/171 (9%)
Query: 57 PEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPA 116
PE S P+ P L PP EA + P PE + T P A S P +
Sbjct: 523 PEESPPSPALETP-LSPPPEASPLSPPFEESPLSPPPEELPTSPPPEASRLSP--PPEES 579
Query: 117 KVSRKRRSSSLSDGGDAGLV--PSKKARLEEKEEEEGAS-SEVADRLQPPPAQAE----- 168
+S S +S +A + P +++ L EE S A RL PPP +
Sbjct: 580 PMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPP 639
Query: 169 -----GAFPNLARVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPADSMLN 214
P ++R+ L+ P P +PP E+ + P S L+
Sbjct: 640 EESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLS 690
Score = 35.8 bits (81), Expect = 0.030
Identities = 53/216 (24%), Positives = 76/216 (35%), Gaps = 34/216 (15%)
Query: 28 LRLHRSLQLSLVMRSARELYLSAKVEAL------EPEVSLPAALPSDPRLHPPREAESTA 81
L L R L+ S + E LS E+ E +S P P P L P A
Sbjct: 483 LHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALETPLSPPPEA 542
Query: 82 ETATPDGEH----PFPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLV- 136
+P E P PE + T P A S P + +S S +S +A +
Sbjct: 543 SPLSPPFEESPLSPPPEELPTSPPPEASRLSP--PPEESPMSPPPEESPMSPPPEASRLF 600
Query: 137 -PSKKARLEEKEEEEGASSEV-ADRLQPPPAQAE-------------------GAFPNLA 175
P +++ L EE S A RL PPP + P ++
Sbjct: 601 PPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVS 660
Query: 176 RVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPADS 211
R+ L+ P PT+PP ++ + P DS
Sbjct: 661 RLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDS 696
Score = 33.1 bits (74), Expect = 0.20
Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 18/149 (12%)
Query: 56 EPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRP 115
+PE A+P +P L P +AE + P+ H P+ + +P EE P
Sbjct: 773 QPEEPCLCAVPEEPHLSP--QAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLSPQPEE 830
Query: 116 AKVSRKRRSSSLSDGGDAGLV------PSKKARLEEKEEEEGASSEVAD-RLQPPPAQAE 168
+ +S + LS + + P R E+ EE G + L PPP +
Sbjct: 831 SHLSPQSEEPCLSPRPEESHLSPELEKPPLSPRPEKPPEEPGQCPAPEELPLFPPPGE-- 888
Query: 169 GAFPNLARVLQRRFSGLLNCSPAAPPTAP 197
P+L+ +L P PP +P
Sbjct: 889 ---PSLSPLLGEPALS----EPGEPPLSP 910
Score = 32.7 bits (73), Expect = 0.26
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 57 PEVSLPAALPSDPRLHPPRE-------AESTAETATPDGEHPFPEPMDTQEAPTAEETSA 109
PEVS + LP RL PP E E + + P+ P P D+ +P E++ A
Sbjct: 648 PEVSRLSPLPVVSRLSPPPEESPLSPPPEESPTSPPPEASRLSPPPEDSPTSPPPEDSPA 707
Query: 110 CCAPRPAKVSRKRRSSSL 127
P + +S S L
Sbjct: 708 SPPPEDSLMSLPLEESPL 725
Score = 29.6 bits (65), Expect = 2.2
Identities = 40/175 (22%), Positives = 62/175 (35%), Gaps = 33/175 (18%)
Query: 55 LEPEVSLPA-------ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEET 107
LEP++ P P + L PP E T+ P P ++ +P EE
Sbjct: 426 LEPQLEAPLNEEMPLLPPPEESPLSPPPEESPTS-----------PPPEASRLSPPPEEL 474
Query: 108 SACCAPRPAKVSRKRRSSSLSDGGDAGLV--PSKKARLEEKEE------EEGASSEVADR 159
A P +SR S LS + + P + + EE EE S +
Sbjct: 475 PASPLPEALHLSRPLEESPLSPPPEESPLSPPPESSPFSPLEESPLSPPEESPPSPALET 534
Query: 160 LQPPPAQAEGAFPNLARVLQRRFSGLLNCSPAAPPTAPPACEAKPACRPADSMLN 214
PP +A P L+ P PT+PP ++ + P +S ++
Sbjct: 535 PLSPPPEASPLSPPFE-------ESPLSPPPEELPTSPPPEASRLSPPPEESPMS 582
Score = 28.5 bits (62), Expect = 4.8
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 93 PEP-MDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKAR 142
P+P M TQ P A AP A VS + S GG AGLVP + ++
Sbjct: 3326 PQPLMPTQ--PPAHALQQRLAPSMAMVSNQGHMLSGQHGGQAGLVPQQSSQ 3374
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/172 (26%), Positives = 70/172 (40%), Gaps = 33/172 (19%)
Query: 56 EPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPR 114
EP LP+A+ ++ PR+A++ +P G P PT E S C AP
Sbjct: 945 EPREELPSAVRAEEGQSTPRQADAQCREGSP-GSQQHPPSQKAPNPPTFSELSHCRGAPE 1003
Query: 115 PAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPP--PAQAEG--A 170
+ R G AG +P + + EE +++ R Q P P A G +
Sbjct: 1004 LPREGR----------GRAGTLPR-----DYRYSEESTPADLGPRAQSPGSPLHARGQDS 1048
Query: 171 FPNLARVLQRRFSGLLNCSPAAPPTAPPACEAK----PACRPADSMLNVLVR 218
+P + +L +R +P PP PP E + PAD+ + VL R
Sbjct: 1049 WPVSSALLSKR------PAPQRPP--PPKREPRRYRATDGAPADAPVGVLGR 1092
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 38.1 bits (87), Expect = 0.006
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFP--EPMDTQEAPTAEETSACCAPRPAKVSRK 121
+L DPRL P + + +P P P + + +A A +A APR A+VS
Sbjct: 121 SLLGDPRLRSPGSKGAESRLRSPVRAKPIPGQKTSEADDAAGAAAAAARPAPREAQVSSV 180
Query: 122 RRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPA 165
R S+ +G V S++ + E +E+ A ++D QPPPA
Sbjct: 181 RIVSA------SGTV-SEEIEVLEMVKEDEAPLALSDAEQPPPA 217
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.7 bits (86), Expect = 0.008
Identities = 37/145 (25%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 62 PAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEA-PTAEETSACCAPRPAKVSR 120
P L + LH PRE + P P P+ A P + +P + +
Sbjct: 139 PQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAW 198
Query: 121 KRRSSSL--SDGGDAGLVPSKKARLEEK-----EEEEGASSEVADRLQPPPAQAEGAFPN 173
++RSS +G A L+PS K + EE A S + P A+ P
Sbjct: 199 EQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPP 258
Query: 174 LARVLQRRFSGLLNCSPAAPPTAPP 198
LAR+L L +PP P
Sbjct: 259 LARLLLASAVSLAASLARSPPPLQP 283
>gi|169161145 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 37.7 bits (86), Expect = 0.008
Identities = 37/145 (25%), Positives = 53/145 (36%), Gaps = 8/145 (5%)
Query: 62 PAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEA-PTAEETSACCAPRPAKVSR 120
P L + LH PRE + P P P+ A P + +P + +
Sbjct: 139 PQRLAARRWLHSPREPTPPGRLSAPPRHGPHPQSFRRPSAHPPGRGSGRVPRGQPEQQAW 198
Query: 121 KRRSSSL--SDGGDAGLVPSKKARLEEK-----EEEEGASSEVADRLQPPPAQAEGAFPN 173
++RSS +G A L+PS K + EE A S + P A+ P
Sbjct: 199 EQRSSHFLAPEGSVASLLPSAKPARAPRPAPRAREEAAAGSRGRGGAERPAARGSAQQPP 258
Query: 174 LARVLQRRFSGLLNCSPAAPPTAPP 198
LAR+L L +PP P
Sbjct: 259 LARLLLASAVSLAASLARSPPPLQP 283
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 48 LSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEET 107
+S + +EP VS+P A P++ + + ET P + P PE +E AE
Sbjct: 1182 VSTQACVIEPIVSIPKA-GRKPKI------QESEETVEPKEDMPLPEERKEEEEMQAEAE 1234
Query: 108 SACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKE------EEEGASSEVADRLQ 161
A S + ++S +D ++ +K+ +EE+E EE+ S E L+
Sbjct: 1235 EAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELE 1294
Query: 162 PPPAQAE 168
P + E
Sbjct: 1295 EPEPEEE 1301
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 48 LSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEET 107
+S + +EP VS+P A P++ + + ET P + P PE +E AE
Sbjct: 1182 VSTQACVIEPIVSIPKA-GRKPKI------QESEETVEPKEDMPLPEERKEEEEMQAEAE 1234
Query: 108 SACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKE------EEEGASSEVADRLQ 161
A S + ++S +D ++ +K+ +EE+E EE+ S E L+
Sbjct: 1235 EAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELE 1294
Query: 162 PPPAQAE 168
P + E
Sbjct: 1295 EPEPEEE 1301
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 13/127 (10%)
Query: 48 LSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEET 107
+S + +EP VS+P A P++ + + ET P + P PE +E AE
Sbjct: 1182 VSTQACVIEPIVSIPKA-GRKPKI------QESEETVEPKEDMPLPEERKEEEEMQAEAE 1234
Query: 108 SACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKE------EEEGASSEVADRLQ 161
A S + ++S +D ++ +K+ +EE+E EE+ S E L+
Sbjct: 1235 EAEEGEEEDAASSEVPAASPADSSNSPETETKEPEVEEEEEKPRVSEEQRQSEEEQQELE 1294
Query: 162 PPPAQAE 168
P + E
Sbjct: 1295 EPEPEEE 1301
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 36.6 bits (83), Expect = 0.018
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 48 LSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPT---A 104
L A++E EP + P AL P L P E E A P P P + + APT
Sbjct: 244 LLAQLEHSEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAP-EPEPAPTPAPG 302
Query: 105 EETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPP 164
E AP P + L P+ LE E++ A S+ + L+P P
Sbjct: 303 SELEVAPAPAPELQQAPEPAVGLES------APAPALELEPAPEQDPAPSQTLE-LEPAP 355
Query: 165 AQAEGAFPN 173
A P+
Sbjct: 356 APVPSLQPS 364
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 36.6 bits (83), Expect = 0.018
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 48 LSAKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPT---A 104
L A++E EP + P AL P L P E E A P P P + + APT
Sbjct: 189 LLAQLEHSEPIEAEPEALSPVPALKPTPELELALTPARAPSPVPAPAP-EPEPAPTPAPG 247
Query: 105 EETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPP 164
E AP P + L P+ LE E++ A S+ + L+P P
Sbjct: 248 SELEVAPAPAPELQQAPEPAVGLES------APAPALELEPAPEQDPAPSQTLE-LEPAP 300
Query: 165 AQAEGAFPN 173
A P+
Sbjct: 301 APVPSLQPS 309
>gi|156564384 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 36.6 bits (83), Expect = 0.018
Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 72 HPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGG 131
HPP S T + P + AP T+A A P+ S+ SSLS G
Sbjct: 229 HPPHRTASVFGTHQAFAPYNKPSLSGARSAPRLNTTNAWGAAPPSLGSQPLYRSSLSHLG 288
Query: 132 DAGLVPSK------KARLEEKEEEEGASSEVADRLQ-PPPAQAEGAFPNLARVLQRRFSG 184
L P A L S +Q P P++ + A + VL G
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQMPKPSRVQQALAGMTSVLMSAI-G 347
Query: 185 LLNCSPAAP-PTAPPA 199
L C AP PT+PPA
Sbjct: 348 LPVCLSRAPQPTSPPA 363
>gi|156564382 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 36.6 bits (83), Expect = 0.018
Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 72 HPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGG 131
HPP S T + P + AP T+A A P+ S+ SSLS G
Sbjct: 229 HPPHRTASVFGTHQAFAPYNKPSLSGARSAPRLNTTNAWGAAPPSLGSQPLYRSSLSHLG 288
Query: 132 DAGLVPSK------KARLEEKEEEEGASSEVADRLQ-PPPAQAEGAFPNLARVLQRRFSG 184
L P A L S +Q P P++ + A + VL G
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQMPKPSRVQQALAGMTSVLMSAI-G 347
Query: 185 LLNCSPAAP-PTAPPA 199
L C AP PT+PPA
Sbjct: 348 LPVCLSRAPQPTSPPA 363
>gi|156564380 deltex 2 isoform a [Homo sapiens]
Length = 622
Score = 36.6 bits (83), Expect = 0.018
Identities = 39/136 (28%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 72 HPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGG 131
HPP S T + P + AP T+A A P+ S+ SSLS G
Sbjct: 229 HPPHRTASVFGTHQAFAPYNKPSLSGARSAPRLNTTNAWGAAPPSLGSQPLYRSSLSHLG 288
Query: 132 DAGLVPSK------KARLEEKEEEEGASSEVADRLQ-PPPAQAEGAFPNLARVLQRRFSG 184
L P A L S +Q P P++ + A + VL G
Sbjct: 289 PQHLPPGSSTSGAVSASLPSGPSSSPGSVPATVPMQMPKPSRVQQALAGMTSVLMSAI-G 347
Query: 185 LLNCSPAAP-PTAPPA 199
L C AP PT+PPA
Sbjct: 348 LPVCLSRAPQPTSPPA 363
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 36.6 bits (83), Expect = 0.018
Identities = 45/151 (29%), Positives = 57/151 (37%), Gaps = 22/151 (14%)
Query: 76 EAESTAETATPDGEHPFPEPMDTQEA---------PTAEETSACCAPRPAKVSRKRR--- 123
E ES E + P E P P P A P S A R + VS R
Sbjct: 1867 EEESQDELSRPSSEAPPPGPPHALRADSSPILGPQPPDAPASGTEATRGSSVSEAERLTA 1926
Query: 124 -SSSLSDGGDAGLVPSKKARLEEKEEEEGAS---SEVADRLQPPPAQAEGAFPNLAR--V 177
S S+S GL A L E++ G++ V+ R P++ G+ P LAR
Sbjct: 1927 SSCSMSSQSMPGLPWLGPAPLGSVEKDTGSALSYKPVSPRRPWSPSKEAGSRPPLARKHS 1986
Query: 178 LQRRFSGLLNCSPAAPPTA----PPACEAKP 204
L + S CSPA P A PP P
Sbjct: 1987 LTKNDSSPQRCSPAREPQASAPSPPGLHVDP 2017
Score = 28.1 bits (61), Expect = 6.3
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 92 FPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEG 151
F EP + + + EETSA PA++S + + LS G + S + E
Sbjct: 273 FEEPTEGESTDSEEETSATSG-HPAELSPRPKQPLLSSG-----LYSSGSHSSSHERCSL 326
Query: 152 ASSEVADRLQPPPAQAE 168
+ S A L+ PP E
Sbjct: 327 SQSSTAQSLEDPPPFVE 343
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 36.6 bits (83), Expect = 0.018
Identities = 45/151 (29%), Positives = 57/151 (37%), Gaps = 22/151 (14%)
Query: 76 EAESTAETATPDGEHPFPEPMDTQEA---------PTAEETSACCAPRPAKVSRKRR--- 123
E ES E + P E P P P A P S A R + VS R
Sbjct: 1867 EEESQDELSRPSSEAPPPGPPHALRADSSPILGPQPPDAPASGTEATRGSSVSEAERLTA 1926
Query: 124 -SSSLSDGGDAGLVPSKKARLEEKEEEEGAS---SEVADRLQPPPAQAEGAFPNLAR--V 177
S S+S GL A L E++ G++ V+ R P++ G+ P LAR
Sbjct: 1927 SSCSMSSQSMPGLPWLGPAPLGSVEKDTGSALSYKPVSPRRPWSPSKEAGSRPPLARKHS 1986
Query: 178 LQRRFSGLLNCSPAAPPTA----PPACEAKP 204
L + S CSPA P A PP P
Sbjct: 1987 LTKNDSSPQRCSPAREPQASAPSPPGLHVDP 2017
Score = 28.1 bits (61), Expect = 6.3
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Query: 92 FPEPMDTQEAPTAEETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEG 151
F EP + + + EETSA PA++S + + LS G + S + E
Sbjct: 273 FEEPTEGESTDSEEETSATSG-HPAELSPRPKQPLLSSG-----LYSSGSHSSSHERCSL 326
Query: 152 ASSEVADRLQPPPAQAE 168
+ S A L+ PP E
Sbjct: 327 SQSSTAQSLEDPPPFVE 343
>gi|115511030 hypothetical protein LOC115004 [Homo sapiens]
Length = 522
Score = 36.6 bits (83), Expect = 0.018
Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 15/137 (10%)
Query: 50 AKVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSA 109
A ++ E + AALP + P R++ S + + PD TQE P T A
Sbjct: 30 APMDPTESPAAPEAALPKAGKFGPARKSGSRQKKSAPD----------TQERPPVRATGA 79
Query: 110 CCAPRPAKVSRKRRSSSLSDGGDAGLVP--SKKARLEEKEEEEGASSEVADRLQPPPAQA 167
P + + S + S G GL P +++ L + + + +PPP
Sbjct: 80 RAKKAPQRAQDTQPSDATSAPGAEGLEPPAAREPALSRAGSCRQRGARCSTKPRPPPGPW 139
Query: 168 EGAFPNL---ARVLQRR 181
+ P L A +L RR
Sbjct: 140 DVPSPGLPVSAPILVRR 156
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 36.2 bits (82), Expect = 0.023
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Query: 51 KVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC 110
KV + P+V A P+ P E+ES+ E + + E P + + + A
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303
Query: 111 CAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPP------ 164
AP + ++ + G AG V S+ + +E+ E +S E +D + P
Sbjct: 304 SAPAKGTPG---KGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALL 360
Query: 165 -AQAEGAFPNL-ARVLQRRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
A+A G + A + S +PA P T P +A+ R DS
Sbjct: 361 QAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDS 410
Score = 35.8 bits (81), Expect = 0.030
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPRPAKVSRKR 122
A+ S + P E ++ + D E P +A + +TS A PAK S R
Sbjct: 325 AVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKES-PR 383
Query: 123 RSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE--GAFPNL-ARVLQ 179
+ ++ + G G +K + +E+ + +SSE +D + PAQA+ G P + A
Sbjct: 384 KGAAPAPPGKTGPAVAKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQVRAASAP 442
Query: 180 RRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
+ S +PA P T P A + + + DS
Sbjct: 443 AKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475
Score = 29.3 bits (64), Expect = 2.8
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 26/111 (23%)
Query: 54 ALEPEVSLP--AALPSDPRLHPPREAE--------STAETATPDGEHP------------ 91
AL P P A P+ P P A+ S++E + DGE P
Sbjct: 899 ALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPP 958
Query: 92 --FPEPMDTQEAPTAE--ETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPS 138
F +P + P A + A PR A+ S SS S+ D ++P+
Sbjct: 959 LIFVDPNRSPAGPAATPAQAQAASTPRKARASESTARSSSSESEDEDVIPA 1009
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 36.2 bits (82), Expect = 0.023
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Query: 51 KVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC 110
KV + P+V A P+ P E+ES+ E + + E P + + + A
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303
Query: 111 CAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPP------ 164
AP + ++ + G AG V S+ + +E+ E +S E +D + P
Sbjct: 304 SAPAKGTPG---KGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALL 360
Query: 165 -AQAEGAFPNL-ARVLQRRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
A+A G + A + S +PA P T P +A+ R DS
Sbjct: 361 QAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDS 410
Score = 35.8 bits (81), Expect = 0.030
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPRPAKVSRKR 122
A+ S + P E ++ + D E P +A + +TS A PAK S R
Sbjct: 325 AVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKES-PR 383
Query: 123 RSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE--GAFPNL-ARVLQ 179
+ ++ + G G +K + +E+ + +SSE +D + PAQA+ G P + A
Sbjct: 384 KGAAPAPPGKTGPAVAKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQVRAASAP 442
Query: 180 RRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
+ S +PA P T P A + + + DS
Sbjct: 443 AKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475
Score = 29.3 bits (64), Expect = 2.8
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 26/111 (23%)
Query: 54 ALEPEVSLP--AALPSDPRLHPPREAE--------STAETATPDGEHP------------ 91
AL P P A P+ P P A+ S++E + DGE P
Sbjct: 899 ALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPP 958
Query: 92 --FPEPMDTQEAPTAE--ETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPS 138
F +P + P A + A PR A+ S SS S+ D ++P+
Sbjct: 959 LIFVDPNRSPAGPAATPAQAQAASTPRKARASESTARSSSSESEDEDVIPA 1009
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 36.2 bits (82), Expect = 0.023
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Query: 51 KVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC 110
KV + P+V A P+ P E+ES+ E + + E P + + + A
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303
Query: 111 CAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPP------ 164
AP + ++ + G AG V S+ + +E+ E +S E +D + P
Sbjct: 304 SAPAKGTPG---KGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALL 360
Query: 165 -AQAEGAFPNL-ARVLQRRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
A+A G + A + S +PA P T P +A+ R DS
Sbjct: 361 QAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDS 410
Score = 35.8 bits (81), Expect = 0.030
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPRPAKVSRKR 122
A+ S + P E ++ + D E P +A + +TS A PAK S R
Sbjct: 325 AVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKES-PR 383
Query: 123 RSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE--GAFPNL-ARVLQ 179
+ ++ + G G +K + +E+ + +SSE +D + PAQA+ G P + A
Sbjct: 384 KGAAPAPPGKTGPAVAKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQVRAASAP 442
Query: 180 RRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
+ S +PA P T P A + + + DS
Sbjct: 443 AKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475
Score = 29.3 bits (64), Expect = 2.8
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 26/111 (23%)
Query: 54 ALEPEVSLP--AALPSDPRLHPPREAE--------STAETATPDGEHP------------ 91
AL P P A P+ P P A+ S++E + DGE P
Sbjct: 899 ALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPP 958
Query: 92 --FPEPMDTQEAPTAE--ETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPS 138
F +P + P A + A PR A+ S SS S+ D ++P+
Sbjct: 959 LIFVDPNRSPAGPAATPAQAQAASTPRKARASESTARSSSSESEDEDVIPA 1009
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 36.2 bits (82), Expect = 0.023
Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 12/170 (7%)
Query: 51 KVEALEPEVSLPAALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC 110
KV + P+V A P+ P E+ES+ E + + E P + + + A
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303
Query: 111 CAPRPAKVSRKRRSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPP------ 164
AP + ++ + G AG V S+ + +E+ E +S E +D + P
Sbjct: 304 SAPAKGTPG---KGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALL 360
Query: 165 -AQAEGAFPNL-ARVLQRRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
A+A G + A + S +PA P T P +A+ R DS
Sbjct: 361 QAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDS 410
Score = 35.8 bits (81), Expect = 0.030
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPRPAKVSRKR 122
A+ S + P E ++ + D E P +A + +TS A PAK S R
Sbjct: 325 AVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKES-PR 383
Query: 123 RSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE--GAFPNL-ARVLQ 179
+ ++ + G G +K + +E+ + +SSE +D + PAQA+ G P + A
Sbjct: 384 KGAAPAPPGKTGPAVAKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQVRAASAP 442
Query: 180 RRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
+ S +PA P T P A + + + DS
Sbjct: 443 AKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 475
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 35.8 bits (81), Expect = 0.030
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPRPAKVSRKR 122
A+ S + P E ++ + D E P +A + +TS A PAK S R
Sbjct: 248 AVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKES-PR 306
Query: 123 RSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE--GAFPNL-ARVLQ 179
+ ++ + G G +K + +E+ + +SSE +D + PAQA+ G P + A
Sbjct: 307 KGAAPAPPGKTGPAVAKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQVRAASAP 365
Query: 180 RRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
+ S +PA P T P A + + + DS
Sbjct: 366 AKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 398
Score = 29.3 bits (64), Expect = 2.8
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 26/111 (23%)
Query: 54 ALEPEVSLP--AALPSDPRLHPPREAE--------STAETATPDGEHP------------ 91
AL P P A P+ P P A+ S++E + DGE P
Sbjct: 822 ALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPP 881
Query: 92 --FPEPMDTQEAPTAE--ETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPS 138
F +P + P A + A PR A+ S SS S+ D ++P+
Sbjct: 882 LIFVDPNRSPAGPAATPAQAQAASTPRKARASESTARSSSSESEDEDVIPA 932
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 35.8 bits (81), Expect = 0.030
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 7/153 (4%)
Query: 64 ALPSDPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAEETSAC-CAPRPAKVSRKR 122
A+ S + P E ++ + D E P +A + +TS A PAK S R
Sbjct: 248 AVASQTKAGKPEEDSESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKES-PR 306
Query: 123 RSSSLSDGGDAGLVPSKKARLEEKEEEEGASSEVADRLQPPPAQAE--GAFPNL-ARVLQ 179
+ ++ + G G +K + +E+ + +SSE +D + PAQA+ G P + A
Sbjct: 307 KGAAPAPPGKTGPAVAKAQAGKREEDSQ-SSSEESDSEEEAPAQAKPSGKAPQVRAASAP 365
Query: 180 RRFSGLLNCSPAAP-PTAPPACEAKPACRPADS 211
+ S +PA P T P A + + + DS
Sbjct: 366 AKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDS 398
Score = 29.3 bits (64), Expect = 2.8
Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 26/111 (23%)
Query: 54 ALEPEVSLP--AALPSDPRLHPPREAE--------STAETATPDGEHP------------ 91
AL P P A P+ P P A+ S++E + DGE P
Sbjct: 822 ALAPAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPP 881
Query: 92 --FPEPMDTQEAPTAE--ETSACCAPRPAKVSRKRRSSSLSDGGDAGLVPS 138
F +P + P A + A PR A+ S SS S+ D ++P+
Sbjct: 882 LIFVDPNRSPAGPAATPAQAQAASTPRKARASESTARSSSSESEDEDVIPA 932
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 35.4 bits (80), Expect = 0.039
Identities = 47/186 (25%), Positives = 66/186 (35%), Gaps = 29/186 (15%)
Query: 56 EPEVSLPAALPS----------DPRLHPPREAESTAETATPDGEHPFPEPMDTQEAPTAE 105
+P + P A PS DP P + + PD E P P T TA
Sbjct: 600 DPAIPAPTATPSARGAVIRQNSDPTSEGPGPSPNPPAWVRPDNEAPPKVPQRTSSIATAL 659
Query: 106 ETSACCAPRPAKVSRKR-RSSS-----LSDGGDAGLVPSKKARLEEKEEEEGASSEVADR 159
TS RPA+ R R RS+S L + G + +S+ R
Sbjct: 660 NTSGAGGSRPAQAVRARPRSNSAWQIYLQRRAERGTPKPPGPPAQPPGPPNASSNPDLRR 719
Query: 160 LQPPPAQAEGAFP------NLARVLQRRFSGLLNCSPAAPPTAPPACEAKP------ACR 207
P +++ P A L+R G ++ P + P P +AKP R
Sbjct: 720 SDPGWERSDSVLPASHGHLPQAGSLERNRVG-VSSKPDSSPVLSPGNKAKPDDHRSRPGR 778
Query: 208 PADSML 213
PAD +L
Sbjct: 779 PADFVL 784
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.127 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,261,704
Number of Sequences: 37866
Number of extensions: 562490
Number of successful extensions: 4227
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 376
Number of HSP's that attempted gapping in prelim test: 3729
Number of HSP's gapped (non-prelim): 831
length of query: 223
length of database: 18,247,518
effective HSP length: 98
effective length of query: 125
effective length of database: 14,536,650
effective search space: 1817081250
effective search space used: 1817081250
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.