Search of human proteins with 4826862

Search of human proteins with 4826862

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4826862 nucleoside diphosphate kinase 4 [Homo sapiens]
         (187 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4826862 nucleoside diphosphate kinase 4 [Homo sapiens]             382   e-107
gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]            198   3e-51
gi|38045913 non-metastatic cells 1, protein (NM23A) expressed in...   187   3e-48
gi|4557797 non-metastatic cells 1, protein (NM23A) expressed in ...   187   3e-48
gi|66392227 nucleoside diphosphate kinase B [Homo sapiens]            185   2e-47
gi|66392205 nucleoside diphosphate kinase B [Homo sapiens]            185   2e-47
gi|66392192 nucleoside diphosphate kinase B [Homo sapiens]            185   2e-47
gi|4505409 nucleoside diphosphate kinase B [Homo sapiens]             185   2e-47
gi|66392203 NME1-NME2 protein [Homo sapiens]                          185   2e-47
gi|37574614 nucleoside diphosphate kinase 7 isoform b [Homo sapi...    75   3e-14
gi|7019465 nucleoside diphosphate kinase 7 isoform a [Homo sapiens]    75   3e-14
gi|5031951 nucleoside diphosphate kinase type 6 [Homo sapiens]         69   2e-12
gi|4505413 non-metastatic cells 5, protein expressed in (nucleos...    68   4e-12
gi|148839372 thioredoxin domain containing 3 [Homo sapiens]            57   1e-08
gi|30023828 thioredoxin domain containing 6 [Homo sapiens]             54   8e-08
gi|218505694 potassium channel tetramerisation domain containing...    29   2.7  
gi|209969708 potassium channel tetramerisation domain containing...    29   2.7  
gi|40217617 potassium channel tetramerisation domain containing ...    29   2.7  
gi|18087845 cell division cycle associated 5 [Homo sapiens]            29   2.7  
gi|4505721 peroxisomal biogenesis factor 12 [Homo sapiens]             28   4.6  
gi|4557741 platelet-activating factor acetylhydrolase, isoform I...    27   7.9  
gi|239752336 PREDICTED: similar to RNA binding motif protein, X-...    27   7.9  
gi|239746849 PREDICTED: hypothetical protein XP_002343863 [Homo ...    27   7.9  
gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens]               27   7.9  
gi|81158226 neuronal cell adhesion molecule isoform A precursor ...    27   7.9  
gi|81158224 neuronal cell adhesion molecule isoform B precursor ...    27   7.9  

>gi|4826862 nucleoside diphosphate kinase 4 [Homo sapiens]
          Length = 187

 Score =  382 bits (982), Expect = e-107
 Identities = 187/187 (100%), Positives = 187/187 (100%)

Query: 1   MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQR 60
           MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQR
Sbjct: 1   MGGLFWRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRERTLVAVKPDGVQRRLVGDVIQR 60

Query: 61  FERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRAS 120
           FERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRAS
Sbjct: 61  FERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRAS 120

Query: 121 RAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQ 180
           RAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQ
Sbjct: 121 RAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVEGAQREIQLWFQSSELVSWADGGQ 180

Query: 181 HSSIHPA 187
           HSSIHPA
Sbjct: 181 HSSIHPA 187


>gi|37693993 nucleoside diphosphate kinase 3 [Homo sapiens]
          Length = 169

 Score =  198 bits (503), Expect = 3e-51
 Identities = 89/144 (61%), Positives = 117/144 (81%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +AVKPDGVQRRLVG++++RFER+GF LV +K++QA E +L EHY +LR +PFY  L
Sbjct: 22  ERTFLAVKPDGVQRRLVGEIVRRFERKGFKLVALKLVQASEELLREHYAELRERPFYGRL 81

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM+SGPVVAMVW+G +VVR SRA+IG T+ A+A PGTIRGDF + + +N+IH SDSVE
Sbjct: 82  VKYMASGPVVAMVWQGLDVVRTSRALIGATNPADAPPGTIRGDFCIEVGKNLIHGSDSVE 141

Query: 158 GAQREIQLWFQSSELVSWADGGQH 181
            A+REI LWF++ EL+ W D   H
Sbjct: 142 SARREIALWFRADELLCWEDSAGH 165


>gi|38045913 non-metastatic cells 1, protein (NM23A) expressed in
           isoform a [Homo sapiens]
          Length = 177

 Score =  187 bits (476), Expect = 3e-48
 Identities = 84/144 (58%), Positives = 111/144 (77%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LVG+K +QA E +L EHY DL+ +PF+  L
Sbjct: 30  ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 89

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSVE
Sbjct: 90  VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVE 149

Query: 158 GAQREIQLWFQSSELVSWADGGQH 181
            A++EI LWF   ELV +    Q+
Sbjct: 150 SAEKEIGLWFHPEELVDYTSCAQN 173


>gi|4557797 non-metastatic cells 1, protein (NM23A) expressed in
           isoform b [Homo sapiens]
          Length = 152

 Score =  187 bits (476), Expect = 3e-48
 Identities = 84/144 (58%), Positives = 111/144 (77%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LVG+K +QA E +L EHY DL+ +PF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSVE
Sbjct: 65  VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVE 124

Query: 158 GAQREIQLWFQSSELVSWADGGQH 181
            A++EI LWF   ELV +    Q+
Sbjct: 125 SAEKEIGLWFHPEELVDYTSCAQN 148


>gi|66392227 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  185 bits (469), Expect = 2e-47
 Identities = 82/138 (59%), Positives = 110/138 (79%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LV MK L+A E  L +HY DL+ +PF+P L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM+SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 158 GAQREIQLWFQSSELVSW 175
            A++EI LWF+  ELV +
Sbjct: 125 SAEKEISLWFKPEELVDY 142


>gi|66392205 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  185 bits (469), Expect = 2e-47
 Identities = 82/138 (59%), Positives = 110/138 (79%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LV MK L+A E  L +HY DL+ +PF+P L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM+SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 158 GAQREIQLWFQSSELVSW 175
            A++EI LWF+  ELV +
Sbjct: 125 SAEKEISLWFKPEELVDY 142


>gi|66392192 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  185 bits (469), Expect = 2e-47
 Identities = 82/138 (59%), Positives = 110/138 (79%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LV MK L+A E  L +HY DL+ +PF+P L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM+SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 158 GAQREIQLWFQSSELVSW 175
            A++EI LWF+  ELV +
Sbjct: 125 SAEKEISLWFKPEELVDY 142


>gi|4505409 nucleoside diphosphate kinase B [Homo sapiens]
          Length = 152

 Score =  185 bits (469), Expect = 2e-47
 Identities = 82/138 (59%), Positives = 110/138 (79%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LV MK L+A E  L +HY DL+ +PF+P L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 64

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM+SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSV+
Sbjct: 65  VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 124

Query: 158 GAQREIQLWFQSSELVSW 175
            A++EI LWF+  ELV +
Sbjct: 125 SAEKEISLWFKPEELVDY 142


>gi|66392203 NME1-NME2 protein [Homo sapiens]
          Length = 267

 Score =  185 bits (469), Expect = 2e-47
 Identities = 82/138 (59%), Positives = 110/138 (79%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LV MK L+A E  L +HY DL+ +PF+P L
Sbjct: 120 ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGL 179

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNVIHASDSVE 157
           ++YM+SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + RN+IH SDSV+
Sbjct: 180 VKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVK 239

Query: 158 GAQREIQLWFQSSELVSW 175
            A++EI LWF+  ELV +
Sbjct: 240 SAEKEISLWFKPEELVDY 257



 Score =  150 bits (380), Expect = 5e-37
 Identities = 66/112 (58%), Positives = 89/112 (79%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           ERT +A+KPDGVQR LVG++I+RFE++GF LVG+K +QA E +L EHY DL+ +PF+  L
Sbjct: 5   ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVGLKFMQASEDLLKEHYVDLKDRPFFAGL 64

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNV 149
           ++YM SGPVVAMVWEG NVV+  R M+G T+ A++ PGTIRGDF + + R +
Sbjct: 65  VKYMHSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRTM 116


>gi|37574614 nucleoside diphosphate kinase 7 isoform b [Homo
           sapiens]
          Length = 340

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 13/141 (9%)

Query: 37  RERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPA 96
           +E+TL  +KPD + +   G++I+   + GFT+  +KM+        + + D + +PF+  
Sbjct: 55  KEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPFFNE 112

Query: 97  LIRYMSSGPVVAM-------VWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNV 149
           LI+++++GP++AM       + E   ++  + + +  TD++E    +IR  F     RN 
Sbjct: 113 LIQFITTGPIIAMEILRDDAICEWKRLLGPANSGVARTDASE----SIRALFGTDGIRNA 168

Query: 150 IHASDSVEGAQREIQLWFQSS 170
            H  DS   A RE++L+F SS
Sbjct: 169 AHGPDSFASAAREMELFFPSS 189



 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 7/147 (4%)

Query: 29  GSGGPSWTRERT---LVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHY 85
           G  GP+ T + T      VKP  V   L+G ++      GF +  M+M       + E Y
Sbjct: 190 GGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFY 249

Query: 86  QDLRRKPF-YPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAA---PGTIRGDF 141
           +  +     Y  ++  M SGP VAM  +  N  +  R   G  D   A    PGT+R  F
Sbjct: 250 EVYKGVVTEYHDMVTEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHLRPGTLRAIF 309

Query: 142 SVHISRNVIHASDSVEGAQREIQLWFQ 168
                +N +H +D  E    E+Q +F+
Sbjct: 310 GKTKIQNAVHCTDLPEDGLLEVQYFFK 336


>gi|7019465 nucleoside diphosphate kinase 7 isoform a [Homo sapiens]
          Length = 376

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 13/141 (9%)

Query: 37  RERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPA 96
           +E+TL  +KPD + +   G++I+   + GFT+  +KM+        + + D + +PF+  
Sbjct: 91  KEKTLALIKPDAISK--AGEIIEIINKAGFTITKLKMMMLSRKEALDFHVDHQSRPFFNE 148

Query: 97  LIRYMSSGPVVAM-------VWEGYNVVRASRAMIGHTDSAEAAPGTIRGDFSVHISRNV 149
           LI+++++GP++AM       + E   ++  + + +  TD++E    +IR  F     RN 
Sbjct: 149 LIQFITTGPIIAMEILRDDAICEWKRLLGPANSGVARTDASE----SIRALFGTDGIRNA 204

Query: 150 IHASDSVEGAQREIQLWFQSS 170
            H  DS   A RE++L+F SS
Sbjct: 205 AHGPDSFASAAREMELFFPSS 225



 Score = 54.7 bits (130), Expect = 5e-08
 Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 7/147 (4%)

Query: 29  GSGGPSWTRERT---LVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHY 85
           G  GP+ T + T      VKP  V   L+G ++      GF +  M+M       + E Y
Sbjct: 226 GGCGPANTAKFTNCTCCIVKPHAVSEGLLGKILMAIRDAGFEISAMQMFNMDRVNVEEFY 285

Query: 86  QDLRRKPF-YPALIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAA---PGTIRGDF 141
           +  +     Y  ++  M SGP VAM  +  N  +  R   G  D   A    PGT+R  F
Sbjct: 286 EVYKGVVTEYHDMVTEMYSGPCVAMEIQQNNATKTFREFCGPADPEIARHLRPGTLRAIF 345

Query: 142 SVHISRNVIHASDSVEGAQREIQLWFQ 168
                +N +H +D  E    E+Q +F+
Sbjct: 346 GKTKIQNAVHCTDLPEDGLLEVQYFFK 372


>gi|5031951 nucleoside diphosphate kinase type 6 [Homo sapiens]
          Length = 194

 Score = 69.3 bits (168), Expect = 2e-12
 Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 40  TLVAVKPDGVQRRLVGDVI-QRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPALI 98
           TL  +KPD V   L+ + + Q+     F +V M+ L   +      Y++   + FY  L+
Sbjct: 22  TLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWRKEDCQRFYREHEGRFFYQRLV 81

Query: 99  RYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEA---APGTIRGDFSVHISRNVIHASDS 155
            +M+SGP+ A +    + ++  R ++G T    A   AP +IRG F +  +RN  H SDS
Sbjct: 82  EFMASGPIRAYILAHKDAIQLWRTLMGPTRVFRARHVAPDSIRGSFGLTDTRNTTHGSDS 141

Query: 156 VEGAQREIQLWFQSSELVSW 175
           V  A REI  +F       W
Sbjct: 142 VVSASREIAAFFPDFSEQRW 161


>gi|4505413 non-metastatic cells 5, protein expressed in
           (nucleoside-diphosphate kinase) [Homo sapiens]
          Length = 212

 Score = 68.2 bits (165), Expect = 4e-12
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 7/134 (5%)

Query: 38  ERTLVAVKPDGVQRRL-VGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPA 96
           E+TL  +KPD V +   + D+I R    GFT+V  + L+      +  Y +   K F+P 
Sbjct: 13  EKTLAIIKPDIVDKEEEIQDIILR---SGFTIVQRRKLRLSPEQCSNFYVEKYGKMFFPN 69

Query: 97  LIRYMSSGPVVAMVWEGYNVVRASRAMIGHTDS---AEAAPGTIRGDFSVHISRNVIHAS 153
           L  YMSSGP+VAM+   +  +     ++G  +S    E  P ++R  +     RN +H S
Sbjct: 70  LTAYMSSGPLVAMILARHKAISYWLELLGPNNSLVAKETHPDSLRAIYGTDDLRNALHGS 129

Query: 154 DSVEGAQREIQLWF 167
           +    A+REI+  F
Sbjct: 130 NDFAAAEREIRFMF 143


>gi|148839372 thioredoxin domain containing 3 [Homo sapiens]
          Length = 588

 Score = 56.6 bits (135), Expect = 1e-08
 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 4/137 (2%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           + TL  +KP     +    +++  +  GF L  +K +      + + Y  +  K FY  L
Sbjct: 451 QSTLGLIKPHATSEQRE-QILKIVKEAGFDLTQVKKMFLTPEQIEKIYPKVTGKDFYKDL 509

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEA---APGTIRGDFSVHISRNVIHASD 154
           +  +S GP + M+   +N V   R ++G TD  EA   +P +IR  F +   +N++H + 
Sbjct: 510 LEMLSVGPSMVMILTKWNAVAEWRRLMGPTDPEEAKLLSPDSIRAQFGISKLKNIVHGAS 569

Query: 155 SVEGAQREIQLWFQSSE 171
           +   A+  +   F+  E
Sbjct: 570 NAYEAKEVVNRLFEDPE 586



 Score = 44.3 bits (103), Expect = 6e-05
 Identities = 34/134 (25%), Positives = 68/134 (50%), Gaps = 5/134 (3%)

Query: 38  ERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPAL 97
           E+TL  ++P+    R   DV++  +   F ++  + +   E       ++   + ++  L
Sbjct: 316 EKTLALLRPNLFHERK-DDVLRIIKDEDFKILEQRQVVLSEKEAQALCKEYENEDYFNKL 374

Query: 98  IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAA---PGTIRGDFSVH-ISRNVIHAS 153
           I  M+SGP +A+V    N ++  + ++G     EA    P ++   F++  +  N ++ S
Sbjct: 375 IENMTSGPSLALVLLRDNGLQYWKQLLGPRTVEEAIEYFPESLCAQFAMDSLPVNQLYGS 434

Query: 154 DSVEGAQREIQLWF 167
           DS+E A+REIQ +F
Sbjct: 435 DSLETAEREIQHFF 448


>gi|30023828 thioredoxin domain containing 6 [Homo sapiens]
          Length = 263

 Score = 53.9 bits (128), Expect = 8e-08
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 7/140 (5%)

Query: 37  RERTLVAVKPDGVQRRLVGDVIQRFERRGFTLVGMKMLQAPESVLAEHYQDLRRKPFYPA 96
           R  TL  +KPD V      ++I + +  GF ++  +     E+ +   YQ    +  +  
Sbjct: 97  RTCTLAIIKPDAVAHGKTDEIIMKIQEAGFEILTNEERTMTEAEVRLFYQHKAGEEAFEK 156

Query: 97  LIRYMSSGP---VVAMVWEGY-NVVRASRAMIGHTD---SAEAAPGTIRGDFSVHISRNV 149
           L+ +M SGP   ++    EG+ +VV   R ++G  D   +    P ++R  +   +  N 
Sbjct: 157 LVHHMCSGPSHLLILTRTEGFEDVVTTWRTVMGPRDPNVARREQPESLRAQYGTEMPFNA 216

Query: 150 IHASDSVEGAQREIQLWFQS 169
           +H S   E A RE+ L F S
Sbjct: 217 VHGSRDREDADRELALLFPS 236


>gi|218505694 potassium channel tetramerisation domain containing 1
           isoform b [Homo sapiens]
          Length = 865

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  VIQRFERRGFTLVGMKMLQAPESVLAEHY--QDLRRKPFYPALIR 99
           V++R ++RGF +VG        S  +E+   ++LRR P  P++IR
Sbjct: 814 VLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELRRTPRVPSVIR 858


>gi|209969708 potassium channel tetramerisation domain containing 1
           isoform a [Homo sapiens]
          Length = 257

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  VIQRFERRGFTLVGMKMLQAPESVLAEHY--QDLRRKPFYPALIR 99
           V++R ++RGF +VG        S  +E+   ++LRR P  P++IR
Sbjct: 206 VLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELRRTPRVPSVIR 250


>gi|40217617 potassium channel tetramerisation domain containing 1
           isoform a [Homo sapiens]
          Length = 257

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 57  VIQRFERRGFTLVGMKMLQAPESVLAEHY--QDLRRKPFYPALIR 99
           V++R ++RGF +VG        S  +E+   ++LRR P  P++IR
Sbjct: 206 VLERLQQRGFEIVGSCGGGVDSSQFSEYVLRRELRRTPRVPSVIR 250


>gi|18087845 cell division cycle associated 5 [Homo sapiens]
          Length = 252

 Score = 28.9 bits (63), Expect = 2.7
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 10/69 (14%)

Query: 1  MGGLFWRSALRGLRCGPRAPGPSLLVRH-----GSGGPS-----WTRERTLVAVKPDGVQ 50
          M G   RS     R GPRAP P+  +R      GS  PS     W +  +  AV+   V 
Sbjct: 1  MSGRRTRSGGAAQRSGPRAPSPTKPLRRSQRKSGSELPSILPEIWPKTPSAAAVRKPIVL 60

Query: 51 RRLVGDVIQ 59
          +R+V   ++
Sbjct: 61 KRIVAHAVE 69


>gi|4505721 peroxisomal biogenesis factor 12 [Homo sapiens]
          Length = 359

 Score = 28.1 bits (61), Expect = 4.6
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 84  HYQDLRRKPFYPALIRYMSSGPVVAMVWEGYNVVRASRAMIG 125
           H    R K FY A   ++++ P V M WEG+ +V+  R ++G
Sbjct: 146 HPPSSRWKRFYRA---FLAAYPFVNMAWEGWFLVQQLRYILG 184


>gi|4557741 platelet-activating factor acetylhydrolase, isoform Ib,
           alpha subunit [Homo sapiens]
          Length = 410

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 15/104 (14%)

Query: 81  LAEHYQDLRRKPFYPAL-IRYMSSGPVVAMVWEGYNVVRASRAMIGHTDSAEAAPGTIRG 139
           L+ H   + R  F+P   +   +S      VW+ Y      R + GHTDS +        
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWD-YETGDFERTLKGHTDSVQ-------- 154

Query: 140 DFSVHISRNVIHASDSVEGAQREIQLW-FQSSELVSWADGGQHS 182
           D S   S  ++ +      A   I+LW FQ  E +    G  H+
Sbjct: 155 DISFDHSGKLLASC----SADMTIKLWDFQGFECIRTMHGHDHN 194


>gi|239752336 PREDICTED: similar to RNA binding motif protein,
           X-linked [Homo sapiens]
          Length = 138

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 6   WRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRE 38
           + S  RG    PR+ GP  ++R G GG   TRE
Sbjct: 89  FESGRRGPPPPPRSRGPPRVLRGGRGGSGGTRE 121


>gi|239746849 PREDICTED: hypothetical protein XP_002343863 [Homo
           sapiens]
          Length = 138

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 6   WRSALRGLRCGPRAPGPSLLVRHGSGGPSWTRE 38
           + S  RG    PR+ GP  ++R G GG   TRE
Sbjct: 89  FESGRRGPPPPPRSRGPPRVLRGGRGGSGGTRE 121


>gi|12232413 poly ADP-ribose polymerase 12 [Homo sapiens]
          Length = 701

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 8/22 (36%), Positives = 14/22 (63%)

Query: 165 LWFQSSELVSWADGGQHSSIHP 186
           +W+ S E  SW + G+  ++HP
Sbjct: 378 IWYWSDEFGSWQEYGRQGTVHP 399


>gi|81158226 neuronal cell adhesion molecule isoform A precursor
           [Homo sapiens]
          Length = 1304

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 5   FWRSALRGLRCGPRAPGPSLLVRHGSGGP--SWTRERTLVAVKPDGVQRRLVGDVI 58
           +W +A + L   P   G  +   +G+  P  SW      + + PD   R++ GD I
Sbjct: 362 YWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTI 417


>gi|81158224 neuronal cell adhesion molecule isoform B precursor
           [Homo sapiens]
          Length = 1183

 Score = 27.3 bits (59), Expect = 7.9
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 5   FWRSALRGLRCGPRAPGPSLLVRHGSGGP--SWTRERTLVAVKPDGVQRRLVGDVI 58
           +W +A + L   P   G  +   +G+  P  SW      + + PD   R++ GD I
Sbjct: 356 YWITAPQNLVLSPGEDGTLICRANGNPKPRISWLTNGVPIEIAPDDPSRKIDGDTI 411


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,806,958
Number of Sequences: 37866
Number of extensions: 320299
Number of successful extensions: 801
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 766
Number of HSP's gapped (non-prelim): 31
length of query: 187
length of database: 18,247,518
effective HSP length: 96
effective length of query: 91
effective length of database: 14,612,382
effective search space: 1329726762
effective search space used: 1329726762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.