Guide to the Human Genome
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Name: TXNDC3 Sequence: fasta or formatted (588aa) NCBI GI: 148839372
Description:

thioredoxin domain containing 3

Referenced in:

Glutathione Pathways
Left-Right Axis
Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         39           2
 C cysteine            1.4          8           1
 D aspartate           5.4         32           2
 E glutamate          11.4         67           2
 F phenylalanine       4.4         26           2
 G glycine             3.4         20           1
 H histidine           1.4          8           1
 I isoleucine          6.3         37           2
 K lysine              8.2         48           2
 L leucine             9.9         58           2
 M methionine          2.9         17           2
 N asparagine          4.4         26           2
 P proline             5.3         31           2
 Q glutamine           5.8         34           1
 R arginine            3.7         22           2
 S serine              6.0         35           1
 T threonine           3.7         22           1
 V valine              6.6         39           2
 W tryptophan          0.9          5           1
 Y tyrosine            2.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain containing 3 
NME7                  0.104   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.104   nucleoside diphosphate kinase 7 isoform a 
TXNDC6                0.084   thioredoxin domain containing 6 
NME5                  0.058   non-metastatic cells 5, protein expressed in (nucleos...
NME6                  0.050   nucleoside diphosphate kinase type 6 
NME1-NME2             0.035   NME1-NME2 protein 
NME2                  0.032   nucleoside diphosphate kinase B 
NME2                  0.032   nucleoside diphosphate kinase B 
NME2                  0.032   nucleoside diphosphate kinase B 
NME2                  0.032   nucleoside diphosphate kinase B 
NME1                  0.029   non-metastatic cells 1, protein (NM23A) expressed in...
NME1                  0.029   non-metastatic cells 1, protein (NM23A) expressed in ...
NME4                  0.028   nucleoside diphosphate kinase 4 
NME3                  0.026   nucleoside diphosphate kinase 3 
TXN                   0.021   thioredoxin 
GLRX3                 0.017   glutaredoxin 3 
DNAJC10               0.014   DnaJ (Hsp40) homolog, subfamily C, member 10 
PDIA3                 0.013   protein disulfide-isomerase A3 precursor 
TXNDC2                0.013   thioredoxin domain-containing 2 isoform 1 
TXNDC2                0.013   thioredoxin domain-containing 2 isoform 2 
TXNDC2                0.013   thioredoxin domain-containing 2 isoform 1 
PDIA4                 0.011   protein disulfide isomerase A4 
TXN2                  0.010   thioredoxin 2 precursor 
CCDC27                0.010   coiled-coil domain containing 27 
SCLT1                 0.010   sodium channel associated protein 1 
TXNDC11               0.010   thioredoxin domain containing 11 
TXNL1                 0.010   thioredoxin-like 1 
PDIA6                 0.007   protein disulfide isomerase A6 
TAF7L                 0.007   TATA box binding protein-associated factor, RNA poly...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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