Guide to the Human Genome
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Name: NME5 Sequence: fasta or formatted (212aa) NCBI GI: 4505413
Description:

non-metastatic cells 5, protein expressed in (nucleoside-diphosphate kinase)

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.1         15           3
 C cysteine            1.4          3           1
 D aspartate           4.7         10           2
 E glutamate           8.0         17           3
 F phenylalanine       3.3          7           2
 G glycine             3.8          8           1
 H histidine           2.8          6           2
 I isoleucine          9.0         19           2
 K lysine              6.6         14           1
 L leucine            11.8         25           2
 M methionine          3.3          7           1
 N asparagine          4.7         10           2
 P proline             9.0         19           3
 Q glutamine           2.8          6           1
 R arginine            4.2          9           2
 S serine              4.7         10           2
 T threonine           3.3          7           1
 V valine              4.2          9           1
 W tryptophan          1.4          3           1
 Y tyrosine            3.8          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   non-metastatic cells 5, protein expressed in (nucleos... 
NME7                  0.237   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.237   nucleoside diphosphate kinase 7 isoform a 
NME6                  0.193   nucleoside diphosphate kinase type 6 
TXNDC3                0.161   thioredoxin domain containing 3 
TXNDC6                0.154   thioredoxin domain containing 6 
NME2                  0.115   nucleoside diphosphate kinase B 
NME2                  0.115   nucleoside diphosphate kinase B 
NME2                  0.115   nucleoside diphosphate kinase B 
NME2                  0.115   nucleoside diphosphate kinase B 
NME1-NME2             0.115   NME1-NME2 protein 
NME4                  0.105   nucleoside diphosphate kinase 4 
NME1                  0.093   non-metastatic cells 1, protein (NM23A) expressed in...
NME1                  0.093   non-metastatic cells 1, protein (NM23A) expressed in ...
NME3                  0.085   nucleoside diphosphate kinase 3 
AK7                   0.066   adenylate kinase 7 
DPY30                 0.037   dpy-30-like protein 
DYDC1                 0.027   DPY30 domain containing 1 
PHF3                  0.012   PHD finger protein 3 
EFCAB5                0.012   EF-hand calcium binding domain 5 isoform b 
EFCAB5                0.012   EF-hand calcium binding domain 5 isoform a 
DYDC2                 0.012   DPY30 domain containing 2 
ARMC8                 0.010   armadillo repeat containing 8 isoform 3 
ARMC8                 0.010   armadillo repeat containing 8 isoform 1 
ARMC8                 0.010   armadillo repeat containing 8 isoform 2 
ERC1                  0.007   RAB6-interacting protein 2 isoform epsilon 
ERC1                  0.007   RAB6-interacting protein 2 isoform delta 
BTBD2                 0.007   BTB (POZ) domain containing 2 
IQCK                  0.007   IQ motif containing K 
SLC4A3                0.005   solute carrier family 4, anion exchanger, member 3 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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