Guide to the Human Genome
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Name: NME1-NME2 Sequence: fasta or formatted (267aa) NCBI GI: 66392203
Description:

NME1-NME2 protein

Referenced in:

Nuclear Receptors
Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         14           1
 C cysteine            1.5          4           1
 D aspartate           5.2         14           1
 E glutamate           7.1         19           2
 F phenylalanine       5.6         15           2
 G glycine             9.7         26           1
 H histidine           2.2          6           1
 I isoleucine          6.0         16           2
 K lysine              8.2         22           1
 L leucine             7.5         20           2
 M methionine          3.7         10           1
 N asparagine          3.0          8           1
 P proline             4.5         12           1
 Q glutamine           3.0          8           1
 R arginine            6.4         17           1
 S serine              4.1         11           1
 T threonine           3.4          9           1
 V valine              9.7         26           2
 W tryptophan          1.5          4           1
 Y tyrosine            2.2          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NME1-NME2 protein 
NME2                  0.554   nucleoside diphosphate kinase B 
NME2                  0.554   nucleoside diphosphate kinase B 
NME2                  0.554   nucleoside diphosphate kinase B 
NME2                  0.554   nucleoside diphosphate kinase B 
NME1                  0.496   non-metastatic cells 1, protein (NM23A) expressed in...
NME1                  0.492   non-metastatic cells 1, protein (NM23A) expressed in ...
NME3                  0.369   nucleoside diphosphate kinase 3 
NME4                  0.308   nucleoside diphosphate kinase 4 
NME7                  0.123   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.123   nucleoside diphosphate kinase 7 isoform a 
NME5                  0.090   non-metastatic cells 5, protein expressed in (nucleos...
NME6                  0.088   nucleoside diphosphate kinase type 6 
TXNDC3                0.077   thioredoxin domain containing 3 
TXNDC6                0.067   thioredoxin domain containing 6 
ABCA1                 0.010   ATP-binding cassette, sub-family A member 1 
DYRK1B                0.006   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.006   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.006   dual-specificity tyrosine-(Y)-phosphorylation regulat...
POLA1                 0.006   DNA-directed DNA polymerase alpha 1 
RP2                   0.006   XRP2 protein 
ABCA12                0.006   ATP-binding cassette, sub-family A, member 12 isofor...
ABCA12                0.006   ATP-binding cassette, sub-family A, member 12 isofor...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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