Guide to the Human Genome
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Name: NME3 Sequence: fasta or formatted (169aa) NCBI GI: 37693993
Description:

nucleoside diphosphate kinase 3

Referenced in:

Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         18           2
 C cysteine            2.4          4           1
 D aspartate           4.1          7           1
 E glutamate           8.3         14           2
 F phenylalanine       4.7          8           1
 G glycine             7.7         13           1
 H histidine           2.4          4           1
 I isoleucine          4.7          8           1
 K lysine              3.6          6           1
 L leucine            11.2         19           2
 M methionine          1.8          3           1
 N asparagine          1.8          3           1
 P proline             4.1          7           2
 Q glutamine           1.8          3           1
 R arginine            9.5         16           2
 S serine              4.1          7           1
 T threonine           3.6          6           1
 V valine              8.9         15           2
 W tryptophan          2.4          4           1
 Y tyrosine            2.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleoside diphosphate kinase 3 
NME1                  0.618   non-metastatic cells 1, protein (NM23A) expressed in...
NME1                  0.618   non-metastatic cells 1, protein (NM23A) expressed in ...
NME2                  0.602   nucleoside diphosphate kinase B 
NME2                  0.602   nucleoside diphosphate kinase B 
NME2                  0.602   nucleoside diphosphate kinase B 
NME2                  0.602   nucleoside diphosphate kinase B 
NME1-NME2             0.602   NME1-NME2 protein 
NME4                  0.542   nucleoside diphosphate kinase 4 
NME6                  0.157   nucleoside diphosphate kinase type 6 
NME7                  0.154   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.154   nucleoside diphosphate kinase 7 isoform a 
NME5                  0.110   non-metastatic cells 5, protein expressed in (nucleos...
TXNDC6                0.107   thioredoxin domain containing 6 
TXNDC3                0.094   thioredoxin domain containing 3 
NIPA2                 0.009   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.009   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.009   non imprinted in Prader-Willi/Angelman syndrome 2 is...
NIPA2                 0.009   non imprinted in Prader-Willi/Angelman syndrome 2 is...
LOC390205             0.006   leucine rich repeat containing 10-like 
SPTY2D1               0.006   SPT2, Suppressor of Ty, domain containing 1 
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform f...
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform e...
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform a ...
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform b ...
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform d...
SCN5A                 0.006   voltage-gated sodium channel type V alpha isoform c...
LOC100294386          0.006   PREDICTED: similar to sodium channel, voltage-gated...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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