Guide to the Human Genome
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Name: NME4 Sequence: fasta or formatted (187aa) NCBI GI: 4826862
Description:

nucleoside diphosphate kinase 4

Referenced in:

Mitochondria
Nucleotide Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.6         16           2
 C cysteine            0.5          1           1
 D aspartate           3.7          7           1
 E glutamate           4.8          9           1
 F phenylalanine       3.2          6           1
 G glycine            10.7         20           2
 H histidine           3.7          7           1
 I isoleucine          4.3          8           1
 K lysine              1.6          3           1
 L leucine             7.5         14           2
 M methionine          3.2          6           1
 N asparagine          1.1          2           1
 P proline             5.9         11           1
 Q glutamine           4.3          8           1
 R arginine           10.7         20           2
 S serine              9.6         18           2
 T threonine           2.7          5           1
 V valine              9.1         17           2
 W tryptophan          2.7          5           1
 Y tyrosine            2.1          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleoside diphosphate kinase 4 
NME3                  0.485   nucleoside diphosphate kinase 3 
NME1                  0.454   non-metastatic cells 1, protein (NM23A) expressed in...
NME1                  0.454   non-metastatic cells 1, protein (NM23A) expressed in ...
NME2                  0.448   nucleoside diphosphate kinase B 
NME2                  0.448   nucleoside diphosphate kinase B 
NME2                  0.448   nucleoside diphosphate kinase B 
NME2                  0.448   nucleoside diphosphate kinase B 
NME1-NME2             0.448   NME1-NME2 protein 
NME7                  0.140   nucleoside diphosphate kinase 7 isoform b 
NME7                  0.140   nucleoside diphosphate kinase 7 isoform a 
NME6                  0.123   nucleoside diphosphate kinase type 6 
NME5                  0.120   non-metastatic cells 5, protein expressed in (nucleos...
TXNDC3                0.090   thioredoxin domain containing 3 
TXNDC6                0.081   thioredoxin domain containing 6 
KCTD1                 0.011   potassium channel tetramerisation domain containing...
KCTD1                 0.011   potassium channel tetramerisation domain containing...
KCTD1                 0.011   potassium channel tetramerisation domain containing ...
CDCA5                 0.011   cell division cycle associated 5 
PEX12                 0.008   peroxisomal biogenesis factor 12 
PAFAH1B1              0.006   platelet-activating factor acetylhydrolase, isoform I...
LOC100288788          0.006   PREDICTED: similar to RNA binding motif protein, X-...
LOC100288788          0.006   PREDICTED: hypothetical protein XP_002343863 
PARP12                0.006   poly ADP-ribose polymerase 12 
NRCAM                 0.006   neuronal cell adhesion molecule isoform A precursor ...
NRCAM                 0.006   neuronal cell adhesion molecule isoform B precursor ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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