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Search of human proteins with 13376181
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
(446 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13376181 tubulin, alpha-like 3 [Homo sapiens] 911 0.0
gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens] 707 0.0
gi|17986283 tubulin, alpha 1a [Homo sapiens] 706 0.0
gi|17921989 tubulin, alpha 4a [Homo sapiens] 705 0.0
gi|14389309 tubulin alpha 6 [Homo sapiens] 705 0.0
gi|156564363 tubulin, alpha 3d [Homo sapiens] 700 0.0
gi|17921993 tubulin, alpha 3c [Homo sapiens] 700 0.0
gi|9507215 tubulin, alpha 8 [Homo sapiens] 689 0.0
gi|46409270 tubulin, alpha 3e [Homo sapiens] 689 0.0
gi|50592996 tubulin, beta, 4 [Homo sapiens] 349 3e-96
gi|29788785 tubulin, beta [Homo sapiens] 346 2e-95
gi|5174735 tubulin, beta, 2 [Homo sapiens] 346 2e-95
gi|14210536 tubulin, beta 6 [Homo sapiens] 346 3e-95
gi|29788768 tubulin, beta 2B [Homo sapiens] 345 6e-95
gi|4507729 tubulin, beta 2 [Homo sapiens] 345 6e-95
gi|21361322 tubulin, beta 4 [Homo sapiens] 344 8e-95
gi|13562114 beta tubulin 1, class VI [Homo sapiens] 332 4e-91
gi|42558279 tubulin, beta 8 [Homo sapiens] 330 2e-90
gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens] 301 1e-81
gi|31543831 tubulin, gamma 1 [Homo sapiens] 224 1e-58
gi|7706751 tubulin, gamma 2 [Homo sapiens] 223 2e-58
gi|7705915 tubulin, epsilon 1 [Homo sapiens] 221 1e-57
gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 124 2e-28
gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens] 124 2e-28
gi|50592998 delta-tubulin [Homo sapiens] 106 4e-23
gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens] 64 4e-10
gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens] 64 4e-10
gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens] 64 4e-10
gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens] 61 2e-09
gi|169218027 PREDICTED: similar to tubulin, gamma 1 [Homo sapiens] 49 1e-05
>gi|13376181 tubulin, alpha-like 3 [Homo sapiens]
Length = 446
Score = 911 bits (2354), Expect = 0.0
Identities = 446/446 (100%), Positives = 446/446 (100%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF
Sbjct: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE
Sbjct: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP
Sbjct: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ
Sbjct: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT
Sbjct: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV
Sbjct: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM
Sbjct: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
Query: 421 EEAEFLEAREDLAALERDYEEVAQSF 446
EEAEFLEAREDLAALERDYEEVAQSF
Sbjct: 421 EEAEFLEAREDLAALERDYEEVAQSF 446
>gi|57013276 tubulin, alpha, ubiquitous [Homo sapiens]
Length = 451
Score = 707 bits (1826), Expect = 0.0
Identities = 330/443 (74%), Positives = 391/443 (88%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
F ET AGKHVPRA+FVDLEPTVID +RTG +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 53 FSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E+IDLVL+R RKLA+QC GLQGFL+F SFGGGTGSGFTSLLMERL+ +Y +K+KLEFS+Y
Sbjct: 113 EIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIS 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACCLLYRGDVVPK+VNAAIA K++ S+QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EARED+AALE+DYEEV
Sbjct: 413 MEEGEFSEAREDMAALEKDYEEV 435
>gi|17986283 tubulin, alpha 1a [Homo sapiens]
Length = 451
Score = 706 bits (1822), Expect = 0.0
Identities = 329/443 (74%), Positives = 391/443 (88%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
F ET AGKHVPRA+FVDLEPTVID +RTG +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 53 FSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E+IDLVL+R RKLA+QC GLQGFL+F SFGGGTGSGFTSLLMERL+ +Y +K+KLEFS+Y
Sbjct: 113 EIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACCLLYRGDVVPK+VNAAIA K++ ++QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EARED+AALE+DYEEV
Sbjct: 413 MEEGEFSEAREDMAALEKDYEEV 435
>gi|17921989 tubulin, alpha 4a [Homo sapiens]
Length = 448
Score = 705 bits (1820), Expect = 0.0
Identities = 328/443 (74%), Positives = 390/443 (88%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+S+H+GQAG+Q+G+ACWELYCLEHGIQP+G Q+ + K + + SF TF
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFTTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
FCET AGKHVPRA+FVDLEPTVID IR G +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 53 FCETGAGKHVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E+ID VL+R RKL++QC GLQGFL+F SFGGGTGSGFTSLLMERL+ +Y +K+KLEFS+Y
Sbjct: 113 EIIDPVLDRIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIS 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACCLLYRGDVVPK+VNAAIAA K++ S+QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EARED+AALE+DYEEV
Sbjct: 413 MEEGEFSEAREDMAALEKDYEEV 435
>gi|14389309 tubulin alpha 6 [Homo sapiens]
Length = 449
Score = 705 bits (1819), Expect = 0.0
Identities = 327/443 (73%), Positives = 391/443 (88%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
F ET AGKHVPRA+FVDLEPTVID +RTG +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 53 FSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E+IDLVL+R RKLA+QC GLQGFL+F SFGGGTGSGFTSLLMERL+ +Y +K+KLEFS+Y
Sbjct: 113 EIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIS 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ +V++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACCLLYRGDVVPK+VNAAIA K++ ++QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTA+ EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EARED+AALE+DYEEV
Sbjct: 413 MEEGEFSEAREDMAALEKDYEEV 435
>gi|156564363 tubulin, alpha 3d [Homo sapiens]
Length = 450
Score = 700 bits (1806), Expect = 0.0
Identities = 325/443 (73%), Positives = 389/443 (87%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
F ET AGKHVPRA+FVDLEPTV+D +RTG +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 53 FSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E++DLVL+R RKLA+ C GLQGFLIF SFGGGTGSGF SLLMERL+ +Y +K+KLEF++Y
Sbjct: 113 EIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACC+LYRGDVVPK+VNAAIA K++ ++QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EAREDLAALE+DYEEV
Sbjct: 413 MEEGEFSEAREDLAALEKDYEEV 435
>gi|17921993 tubulin, alpha 3c [Homo sapiens]
Length = 450
Score = 700 bits (1806), Expect = 0.0
Identities = 325/443 (73%), Positives = 389/443 (87%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
F ET AGKHVPRA+FVDLEPTV+D +RTG +R LFHPEQL++GKEDAANNYARG Y++G
Sbjct: 53 FSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E++DLVL+R RKLA+ C GLQGFLIF SFGGGTGSGF SLLMERL+ +Y +K+KLEF++Y
Sbjct: 113 EIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACC+LYRGDVVPK+VNAAIA K++ ++QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EAREDLAALE+DYEEV
Sbjct: 413 MEEGEFSEAREDLAALEKDYEEV 435
>gi|9507215 tubulin, alpha 8 [Homo sapiens]
Length = 449
Score = 689 bits (1779), Expect = 0.0
Identities = 319/442 (72%), Positives = 384/442 (86%), Gaps = 7/442 (1%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MREC+S+H+GQAG+QIG+ACWEL+CLEHGIQ +G D Q ++ + + SF TFF
Sbjct: 1 MRECISVHVGQAGVQIGNACWELFCLEHGIQADGT-FDAQASKIND------DDSFTTFF 53
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
ET GKHVPRA+ +DLEPTV+D +R G +R LFHPEQL++GKEDAANNYARG Y+VG E
Sbjct: 54 SETGNGKHVPRAVMIDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKE 113
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
IDLVL+R RKL + C GLQGFLIF SFGGGTGSGFTSLLMERL+ +Y +K+KLEF++YP
Sbjct: 114 SIDLVLDRIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYP 173
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
AP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+ Q
Sbjct: 174 APQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQ 233
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +API+SA+KAYHEQ SV++IT+
Sbjct: 234 IVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITS 293
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
+CFE ++Q+VKCDPR GKYMACC+LYRGDVVPK+VN AIAA K++ ++QFVDWCPTGFKV
Sbjct: 294 SCFEPNSQMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKV 353
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
GIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARLDHKFDLMYAKRAF+HWY+ EGM
Sbjct: 354 GINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM 413
Query: 421 EEAEFLEAREDLAALERDYEEV 442
EE EF EAREDLAALE+DYEEV
Sbjct: 414 EEGEFSEAREDLAALEKDYEEV 435
>gi|46409270 tubulin, alpha 3e [Homo sapiens]
Length = 450
Score = 689 bits (1779), Expect = 0.0
Identities = 322/443 (72%), Positives = 387/443 (87%), Gaps = 9/443 (2%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAK-MEHTNASFDTF 59
MREC+SIH+GQAG+QIG+ACWELYCLEHGIQP+G Q+ + K + + SF+TF
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDG--------QMPSDKTIGGGDDSFNTF 52
Query: 60 FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
F ET AGKHVPRA+FVDLEPTV+D +RTG +R LFHPEQL++GKEDAA+NYARG Y++G
Sbjct: 53 FSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAASNYARGHYTIGK 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
E++DLVL+R RKLA+ C GLQGFLIF SFGGGTGSGF SLLMERL+ +YS+K+KLEF++Y
Sbjct: 113 EIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYSKKSKLEFAIY 172
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
PAP++STAVVEPYNS+LTTH+T EH+DC FMVDNEA+YDIC R L +E P++ ++NRL+
Sbjct: 173 PAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIG 232
Query: 240 QVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDIT 299
Q+VSSITASLRF+G LNVDL EFQTNLVPYPRIHFP+ +AP++SA+KAYHEQ SV++IT
Sbjct: 233 QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEIT 292
Query: 300 TACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFK 359
ACFE +NQ+VKCDPR GKYMACC+LYRGDVVPK+VNAAIA K++ ++QFVDWCPTGFK
Sbjct: 293 NACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFK 352
Query: 360 VGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREG 419
VGIN +PPTV+PGGDLAKV R++CMLSNTTAI EAWARL HKFDLMYAK AF+HWY+ EG
Sbjct: 353 VGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLVHKFDLMYAKWAFVHWYVGEG 412
Query: 420 MEEAEFLEAREDLAALERDYEEV 442
MEE EF EAREDLAALE+D EEV
Sbjct: 413 MEEGEFSEAREDLAALEKDCEEV 435
>gi|50592996 tubulin, beta, 4 [Homo sapiens]
Length = 450
Score = 349 bits (895), Expect = 3e-96
Identities = 176/441 (39%), Positives = 260/441 (58%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + I GQ G QIG WE+ EHGI P+G + QLE + + AS
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPSGNYVGDSDLQLERISVYYNEAS----- 55
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
+ K+VPRA+ VDLEP +D +R+G LF P+ + G+ A NN+A+G Y+ G+E
Sbjct: 56 ----SHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFIFGQSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK E C LQGF + S GGGTGSG +LL+ ++ EY + FSV P
Sbjct: 112 LVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKVREEYPDRIMNTFSVVP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDICFRTLKLATPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T SLRF G LN DL + N+VP+PR+HF M FAP+ + + +V ++T
Sbjct: 232 TMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTARGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CDPR G+Y+ ++RG + KEV+ + A +S++S FV+W P KV
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKV 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + S + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMSSTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|29788785 tubulin, beta [Homo sapiens]
Length = 444
Score = 346 bits (888), Expect = 2e-95
Identities = 171/441 (38%), Positives = 257/441 (58%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + I GQ G QIG WE+ EHGI P G QL+ + ++
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISV---------YY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E GK+VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 52 NEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK AE C LQGF + S GGGTGSG +LL+ ++ EY + FSV P
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CDPR G+Y+ ++RG + KEV+ + ++++S FV+W P K
Sbjct: 292 QVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + ++ + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|5174735 tubulin, beta, 2 [Homo sapiens]
Length = 445
Score = 346 bits (888), Expect = 2e-95
Identities = 172/441 (39%), Positives = 256/441 (58%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + + GQ G QIG WE+ EHGI P G QLE + ++
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER---------INVYY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E GK+VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 52 NEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK AE C LQGF + S GGGTGSG +LL+ ++ EY + FSV P
Sbjct: 112 LVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CDPR G+Y+ ++RG + KEV+ + ++++S FV+W P K
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + S + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|14210536 tubulin, beta 6 [Homo sapiens]
Length = 446
Score = 346 bits (887), Expect = 3e-95
Identities = 175/441 (39%), Positives = 260/441 (58%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + I GQ G QIG WE+ EHGI P G + QLE + ++
Sbjct: 1 MREIVHIQAGQCGNQIGTKFWEVISDEHGIDPAGGYVGDSALQLER---------INVYY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E+ + K+VPRA VDLEP +D +R+G LF P+ + G+ A NN+A+G Y+ G+E
Sbjct: 52 NESSSQKYVPRAALVDLEPGTMDSVRSGPFGQLFRPDNFIFGQTGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK E C LQGF + S GGGTGSG +LL+ ++ E+ + FSV P
Sbjct: 112 LVDAVLDVVRKECEHCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVMP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T SLRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 232 TMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CDPR G+Y+ ++RG + KEV+ + A +S++S FV+W P KV
Sbjct: 292 QMFDARNMMAACDPRHGRYLTVATVFRGPMSMKEVDEQMLAIQSKNSSYFVEWIPNNVKV 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP G +A + N+TAI E + R+ +F M+ ++AFLHW+ EGM
Sbjct: 352 AVCDIPPR---GLKMAST-----FIGNSTAIQELFKRISEQFSAMFRRKAFLHWFTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|29788768 tubulin, beta 2B [Homo sapiens]
Length = 445
Score = 345 bits (884), Expect = 6e-95
Identities = 172/441 (39%), Positives = 255/441 (57%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + I GQ G QIG WE+ EHGI P G QLE + ++
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLER---------INVYY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E K+VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 52 NEATGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK +E C LQGF + S GGGTGSG +LL+ ++ EY + FSV P
Sbjct: 112 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F+S N + CDPR G+Y+ ++RG + KEV+ + ++++S FV+W P K
Sbjct: 292 QMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + S + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|4507729 tubulin, beta 2 [Homo sapiens]
Length = 445
Score = 345 bits (884), Expect = 6e-95
Identities = 172/441 (39%), Positives = 255/441 (57%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + I GQ G QIG WE+ EHGI P G QLE + ++
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGSYHGDSDLQLER---------INVYY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E K+VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 52 NEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK +E C LQGF + S GGGTGSG +LL+ ++ EY + FSV P
Sbjct: 112 LVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVMP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYSIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F+S N + CDPR G+Y+ ++RG + KEV+ + ++++S FV+W P K
Sbjct: 292 QMFDSKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + S + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|21361322 tubulin, beta 4 [Homo sapiens]
Length = 444
Score = 344 bits (883), Expect = 8e-95
Identities = 170/441 (38%), Positives = 256/441 (58%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + + GQ G QIG WE+ EHGI P G QLE + ++
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER---------INVYY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E G +VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 52 NEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
++D VL+ RK AE C LQGF + S GGGTGSG +LL+ ++ E+ + FSV P
Sbjct: 112 LVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+TD T+ +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V ++T
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CDPR G+Y+ ++RG + KEV+ + + +S++S FV+W P K
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + + + N+TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|13562114 beta tubulin 1, class VI [Homo sapiens]
Length = 451
Score = 332 bits (851), Expect = 4e-91
Identities = 174/441 (39%), Positives = 253/441 (57%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + I IGQ G QIG WE+ EHGI G QLE + ++
Sbjct: 1 MREIVHIQIGQCGNQIGAKFWEMIGEEHGIDLAGSDRGASALQLERISV---------YY 51
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
E K+VPRA+ VDLEP +D IR+ + +LF P+ + G A NN+A+G Y+ G+E
Sbjct: 52 NEAYGRKYVPRAVLVDLEPGTMDSIRSSKLGALFQPDSFVHGNSGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
+I+ VLE R +E C LQGF I S GGGTGSG +LLM ++ EY + FSV P
Sbjct: 112 LIENVLEVVRHESESCDCLQGFQIVHSLGGGTGSGMGTLLMNKIREEYPDRIMNSFSVMP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+VL+ H E+ D F +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNAVLSIHQLIENADACFCIDNEALYDICFRTLKLTTPTYGDLNHLVSL 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S IT SLRF G LN DL + N+VP+PR+HF M FAP+ + + SV+++T
Sbjct: 232 TMSGITTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTAQGSQQYRALSVAELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CD R G+Y+ ++RG + KEV+ + + ++R+S FV+W P KV
Sbjct: 292 QMFDARNTMAACDLRRGRYLTVACIFRGKMSTKEVDQQLLSVQTRNSSCFVEWIPNNVKV 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + + + N TAI E + R+ F M+ ++AF+HWY EGM
Sbjct: 352 AVCDIPP--------RGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+ EF EA ++ L +Y++
Sbjct: 404 DINEFGEAENNIHDLVSEYQQ 424
>gi|42558279 tubulin, beta 8 [Homo sapiens]
Length = 444
Score = 330 bits (846), Expect = 2e-90
Identities = 166/441 (37%), Positives = 251/441 (56%), Gaps = 17/441 (3%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + IGQ G QIG WE+ EH I G QLE + + AS
Sbjct: 1 MREIVLTQIGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVYYNEAS----- 55
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
G++VPRA+ VDLEP +D +R+G +F P+ + G+ A NN+A+G Y+ G+E
Sbjct: 56 ----GGRYVPRAVLVDLEPGTMDSVRSGPFGQVFRPDNFIFGQCGAGNNWAKGHYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
+++ V++ RK AE C LQGF + S GGGTGSG +LL+ ++ EY + FS+ P
Sbjct: 112 LMESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLLSKIREEYPDRIINTFSILP 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
+P++S VVEPYN+ L+ H E+ D TF +DNEA+YDIC + L + P++ +N LV
Sbjct: 172 SPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSKTLKLPTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T LRF G LN DL + N+VP+PR+HF M FAP+ S + +V+++T
Sbjct: 232 TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + CDPR G+Y+ ++RG + +EV+ + + ++S F DW P K
Sbjct: 292 QMFDAKNMMAACDPRHGRYLTAAAIFRGRMPMREVDEQMFNIQDKNSSYFADWLPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + S + N TAI E + R+ +F M+ ++AFLHWY EGM
Sbjct: 352 AVCDIPP--------RGLKMSATFIGNNTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGM 403
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 404 DEMEFTEAESNMNDLVSEYQQ 424
>gi|55770868 tubulin, beta polypeptide 4, member Q [Homo sapiens]
Length = 434
Score = 301 bits (770), Expect = 1e-81
Identities = 159/441 (36%), Positives = 241/441 (54%), Gaps = 18/441 (4%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFF 60
MRE + GQ G QIG WE+ EH I G QLE + H AS
Sbjct: 1 MRELVLTQTGQCGNQIGAKFWEVISDEHAIDSAGTYHGDSHLQLERINVHHHEAS----- 55
Query: 61 CETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGSE 120
G++V RA+ VDLEP +D +R+G +F P+ +S + A NN+A+GRY+ G+E
Sbjct: 56 ----GGRYVSRAVLVDLEPGTMDSVRSGPFGQVFRPDNFISRQCGAGNNWAKGRYTEGAE 111
Query: 121 VIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYP 180
+ + V++ RK AE C LQGF + S GGGTGSG +LL+ ++ EY + S+
Sbjct: 112 LTESVMDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIWEEYPDRIINTLSILL 171
Query: 181 APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQ 240
P++S VVEPYN+ L+ H E+ D TF +DNEA+YDIC R L + P++ +N LV
Sbjct: 172 LPKVSDTVVEPYNATLSVHQLIENADETFCIDNEALYDICSRTLKLPTPTYGDLNHLVSA 231
Query: 241 VVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITT 300
+S +T L F LN DL + N+VP+PR+HF M FAP+ S + +V+++T
Sbjct: 232 TMSGVTTCLCFPDQLNADLRKLAMNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVAELTQ 291
Query: 301 ACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKV 360
F++ N + DPR G+Y+ +++G + +EV+ + + ++S F DW P K
Sbjct: 292 QMFDAKNMMAARDPRHGRYLTAAAIFQGRMPMREVDEQMFNIQDKNSSYFADWFPNNVKT 351
Query: 361 GINNRPPTVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ + PP + S+ N TA+ E R+ +F + ++AFLHWY EGM
Sbjct: 352 AVCDIPPW--------GLKMSVTFTGNNTAVQEL-KRVSEQFTATFRRKAFLHWYTGEGM 402
Query: 421 EEAEFLEAREDLAALERDYEE 441
+E EF EA ++ L +Y++
Sbjct: 403 DEMEFTEAESNMNDLVSEYQQ 423
>gi|31543831 tubulin, gamma 1 [Homo sapiens]
Length = 451
Score = 224 bits (571), Expect = 1e-58
Identities = 144/449 (32%), Positives = 236/449 (52%), Gaps = 27/449 (6%)
Query: 2 RECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFC 61
RE +++ +GQ G QIG W+ C EHGI P G+V E E T+ D FF
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIV--------EEFATEGTDRK-DVFFY 53
Query: 62 ETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKED--AANNYARGRYSVGS 119
+ ++PRA+ +DLEP VI I + L++PE + + A NN+A G +S G
Sbjct: 54 QADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGE 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
++ + + + + A+ L+GF++ S GGTGSG S L+ERL Y +K +SV+
Sbjct: 113 KIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVF 172
Query: 180 P-APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLV 238
P +S VV+PYNS+LT T++ DC ++DN A+ I +L ++ PS + IN+LV
Sbjct: 173 PNQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLV 232
Query: 239 VQVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADK-AYHEQFSVSD 297
++S+ T +LR+ G +N DLI +L+P PR+HF MT + P+ + A + +V D
Sbjct: 233 STIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLD 292
Query: 298 ITTACFESSNQLVKC--DPRLGK-YMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354
+ + N +V D + Y+A + +G+V P +V+ ++ + R F+ W
Sbjct: 293 VMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWG 352
Query: 355 PTGFKVGINNRPPTVMPGGDLAKVHR-SICMLSNTTAIVEAWARLDHKFDLMYAKRAFLH 413
P +V ++ + P L HR S M++N T+I + R ++D + + AFL
Sbjct: 353 PASIQVALSRKSPY------LPSAHRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLE 406
Query: 414 WYLREGMEEAEFLE---AREDLAALERDY 439
+ +E M + F E +RE + L +Y
Sbjct: 407 QFRKEDMFKDNFDEMDTSREIVQQLIDEY 435
>gi|7706751 tubulin, gamma 2 [Homo sapiens]
Length = 451
Score = 223 bits (569), Expect = 2e-58
Identities = 145/454 (31%), Positives = 236/454 (51%), Gaps = 27/454 (5%)
Query: 2 RECLSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFC 61
RE +++ +GQ G QIG W+ C EHGI P G+V E E T+ D FF
Sbjct: 3 REIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIV--------EEFATEGTDRK-DVFFY 53
Query: 62 ETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKED--AANNYARGRYSVGS 119
+ ++PRA+ +DLEP VI I + L++PE + + A NN+A G +S G
Sbjct: 54 QADDEHYIPRAVLLDLEPRVIHSILNSPYAKLYNPENIYLSEHGGGAGNNWASG-FSQGE 112
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
++ + + + + A+ L+GF++ S GGTGSG S L+ERL Y +K +SV+
Sbjct: 113 KIHEDIFDIIDREADGSDSLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVF 172
Query: 180 P-APRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLV 238
P +S VV+PYNS+LT T++ DC ++DN A+ I +L ++ PS + IN+LV
Sbjct: 173 PYQDEMSDVVVQPYNSLLTLKRLTQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLV 232
Query: 239 VQVVSSITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADK-AYHEQFSVSD 297
++S+ T +LR+ G +N DLI +L+P PR+HF MT + P+ + A + +V D
Sbjct: 233 STIMSASTTTLRYPGYMNNDLIGLIASLIPTPRLHFLMTGYTPLTTDQSVASVRKTTVLD 292
Query: 298 ITTACFESSNQLVKC--DPRLGK-YMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354
+ + N +V D + Y+A + +G+V P +V+ ++ + R F+ W
Sbjct: 293 VMRRLLQPKNVMVSTGRDRQTNHCYIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWG 352
Query: 355 PTGFKVGINNRPPTVMPGGDLAKVHR-SICMLSNTTAIVEAWARLDHKFDLMYAKRAFLH 413
P +V ++ + P L HR S M++N T+I + +FD + + AFL
Sbjct: 353 PASIQVALSRKSPY------LPSAHRVSGLMMANHTSISSLFESSCQQFDKLRKRDAFLE 406
Query: 414 WYLREGMEEAEFLE---AREDLAALERDYEEVAQ 444
+ +E M + F E +RE + L +Y Q
Sbjct: 407 QFRKEDMFKDNFDEMDRSREVVQELIDEYHAATQ 440
>gi|7705915 tubulin, epsilon 1 [Homo sapiens]
Length = 475
Score = 221 bits (563), Expect = 1e-57
Identities = 143/473 (30%), Positives = 231/473 (48%), Gaps = 47/473 (9%)
Query: 1 MRECLSIHIGQAGIQIGDACWELYCLEHG-IQPNGVVLDTQQDQLENAKMEHTNASFDTF 59
M + + + +GQ G QIG W+L EH + G+ + N
Sbjct: 1 MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSFFRNVDTRVVGDGGSIS 60
Query: 60 ---FCETRAGKHVPRALFVDLEPTVIDGIRTGQHRSLFHPEQLLSGKEDAANNYARGRYS 116
C +A RA+ +D+E V++ I G R +F +QL++ + NN+A G
Sbjct: 61 KGKICSLKA-----RAVLIDMEEGVVNEILQGPLRDVFDTKQLITDISGSGNNWAVGHKV 115
Query: 117 VGSEVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEF 176
GS D +LE+ RK AE C LQ F I S GGGTGSG + L++ L E+ +
Sbjct: 116 FGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVT 175
Query: 177 SVYPAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHR--------KLGVEC 228
S+YP+ + PYNS+L EH DC +DN++++DI + KLG
Sbjct: 176 SIYPSGE-DDVITSPYNSILAMKELNEHADCVLPIDNQSLFDIISKIDLMVNSGKLGTTV 234
Query: 229 PSHA------------------SINRLVVQVVSSITASLRFEGPLNVDLIEFQTNLVPYP 270
+ ++N +V ++ ++T+S RFEG LN+DL E NLVP+P
Sbjct: 235 KPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFEGSLNMDLNEISMNLVPFP 294
Query: 271 RIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDV 330
++H+ +++ P+ + + + + F +QL++ DP+ Y+AC L+ RG+V
Sbjct: 295 QLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLLRADPKHSLYLACALMVRGNV 354
Query: 331 VPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTA 390
++ I K S+QFV W G+K + + PP + H S+ L+N T
Sbjct: 355 QISDLRRNIERLKP--SLQFVSWNQEGWKTSLCSVPP-------VGHSH-SLLALANNTC 404
Query: 391 IVEAWARLDHKFDLMYAKRAFLHWYLR-EGMEEAEFLEAREDLAALERDYEEV 442
+ + L +F +Y K+A LH YL+ EGMEE+ F EA L+AL ++Y+++
Sbjct: 405 VKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSALIQEYDQL 457
>gi|239756254 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 124 bits (311), Expect = 2e-28
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 21/305 (6%)
Query: 131 KLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVE 190
K AE C LQGF + S G GTGSG +LL ++ E SV P+ ++ V E
Sbjct: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAE 117
Query: 191 PYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLR 250
P ++ L H E+TD T D EA Y+I R L + ++ + V + +T L
Sbjct: 118 PCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLC 177
Query: 251 FEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLV 310
F LN DL + N V +PR+ F M FAP+ S + ++ +T F++ N ++
Sbjct: 178 FPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKN-MM 236
Query: 311 KCDPRLGKYMACCLLYRGDVVP--KEVNAAIAATKSRH-SVQFVDWCPTGFKVGINNRPP 367
P L M ++ P KEVN + + +++ S F++W T K + +
Sbjct: 237 AAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWD--- 285
Query: 368 TVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLE 427
++P G H+ +A + + +F + +A LHWY EGM E EF E
Sbjct: 286 -ILPHG-----HKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAE 339
Query: 428 AREDL 432
A ++
Sbjct: 340 AENNM 344
>gi|239750785 PREDICTED: similar to tubulin, beta 5 [Homo sapiens]
Length = 365
Score = 124 bits (311), Expect = 2e-28
Identities = 89/305 (29%), Positives = 140/305 (45%), Gaps = 21/305 (6%)
Query: 131 KLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVYPAPRISTAVVE 190
K AE C LQGF + S G GTGSG +LL ++ E SV P+ ++ V E
Sbjct: 58 KEAESCDCLQGFQLTHSLGEGTGSGMGTLLHSKIREEDPDHIMNTSSVMPSLKVFGTVAE 117
Query: 191 PYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVVQVVSSITASLR 250
P ++ L H E+TD T D EA Y+I R L + ++ + V + +T L
Sbjct: 118 PCSAXLPIHPLVENTDETCGTDIEAPYNIRFRTLELTTQNYEDLTHXVSANMRGVTTFLC 177
Query: 251 FEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFESSNQLV 310
F LN DL + N V +PR+ F M FAP+ S + ++ +T F++ N ++
Sbjct: 178 FPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFDAKN-MM 236
Query: 311 KCDPRLGKYMACCLLYRGDVVP--KEVNAAIAATKSRH-SVQFVDWCPTGFKVGINNRPP 367
P L M ++ P KEVN + + +++ S F++W T K + +
Sbjct: 237 AAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSASSYFMEWMLTTVKTAMWD--- 285
Query: 368 TVMPGGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLE 427
++P G H+ +A + + +F + +A LHWY EGM E EF E
Sbjct: 286 -ILPHG-----HKMAVTFVGNSAATQKLSMASQQFPAVLCGKAVLHWYAGEGMNEMEFAE 339
Query: 428 AREDL 432
A ++
Sbjct: 340 AENNM 344
>gi|50592998 delta-tubulin [Homo sapiens]
Length = 453
Score = 106 bits (265), Expect = 4e-23
Identities = 107/472 (22%), Positives = 196/472 (41%), Gaps = 62/472 (13%)
Query: 5 LSIHIGQAGIQIGDACWELYCLEHGIQPNGVVLDTQQDQLENAKMEHTNASFDTFFCETR 64
+++ +GQ G QIG ++ L G+ + + + + E FF E
Sbjct: 4 VTVQLGQCGNQIGFEVFDAL-LSDSHSSQGLCSMRENEAYQASCKER-------FFSEEE 55
Query: 65 AGKHVPRALFVDLEPTVIDGI-----RTGQHRSLFHPEQLLSGKEDAANNYARGRYSVGS 119
G + RA+ VD+EP VI+ + ++GQ + + K+ + NN+A G G
Sbjct: 56 NGVPIARAVLVDMEPKVINQMLSKAAQSGQWK--YGQHACFCQKQGSGNNWAYGYSVHGP 113
Query: 120 EVIDLVLERTRKLAEQCGGLQGFLIFRSFGGGTGSGFTSLLMERLTGEYSRKTKLEFSVY 179
+ ++ RK E+C GF I S GGTGSG + + + L +YS K+ ++
Sbjct: 114 RHEESIMNIIRKEVEKCDSFSGFFIIMSMAGGTGSGLGAFVTQNLEDQYSNSLKMNQIIW 173
Query: 180 PAPRISTAVVEPYNSVLTTHSTTEHTDCTFMVDNEAVYDICHRKLGVECPSHASINRLVV 239
P +V+ YNS+LT +D + +N+A++ IC + + ++ S + IN+++
Sbjct: 174 PY-GTGEVIVQNYNSILTLSHLYRSSDALLLHENDAIHKICAKLMNIKQISFSDINQVLA 232
Query: 240 QVVSSI-----TASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFS 294
+ S+ +A F N L + +LVP+P P +S + + F+
Sbjct: 233 HQLGSVFQPTYSAESSFHYRRN-PLGDLMEHLVPHPEFKMLSVRNIPHMSENSLAYTTFT 291
Query: 295 VSD---------ITTACFES----------------SNQLVKCDPRLGKYMACCLLYRGD 329
+ I+ A E S + D +A ++ RG
Sbjct: 292 WAGLLKHLRQMLISNAKMEEGIDRHVWPPLSGLPPLSKMSLNKDLHFNTSIANLVILRG- 350
Query: 330 VVPKEVNAAIAATKSRHSVQFVDWCP--TGFKVGINNRPPTVMPGGDLAKVHRSICMLSN 387
K+V +A + + W F V R +K +S ++SN
Sbjct: 351 ---KDVQSA-DVEGFKDPALYTSWLKPVNAFNVWKTQRA--------FSKYEKSAVLVSN 398
Query: 388 TTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLEAREDLAALERDY 439
+ +V+ + K M+A +A++H Y + G+EE +FL++ L + Y
Sbjct: 399 SQFLVKPLDMIVGKAWNMFASKAYIHQYTKFGIEEEDFLDSFTSLEQVVASY 450
>gi|169178090 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 63.5 bits (153), Expect = 4e-10
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 295 VSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354
VS +T F++ N L CDP G Y+ + G + +EV+ ++++S F W
Sbjct: 178 VSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWI 237
Query: 355 PTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVE--AWARLDHKFDLMYAKRAFL 412
P + + PP ++ S+ +SN TAI E + + +F + +AFL
Sbjct: 238 PHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFL 289
Query: 413 HWYLREGMEEAEFLEAREDLAALERDY 439
WY +GM + EF E ++ L +Y
Sbjct: 290 SWYSGKGMHDVEFAEVESNMNNLVSEY 316
>gi|169179398 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 63.5 bits (153), Expect = 4e-10
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 295 VSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354
VS +T F++ N L CDP G Y+ + G + +EV+ ++++S F W
Sbjct: 178 VSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWI 237
Query: 355 PTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVE--AWARLDHKFDLMYAKRAFL 412
P + + PP ++ S+ +SN TAI E + + +F + +AFL
Sbjct: 238 PHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFL 289
Query: 413 HWYLREGMEEAEFLEAREDLAALERDY 439
WY +GM + EF E ++ L +Y
Sbjct: 290 SWYSGKGMHDVEFAEVESNMNNLVSEY 316
>gi|169181282 PREDICTED: similar to hCG1784562 [Homo sapiens]
Length = 316
Score = 63.5 bits (153), Expect = 4e-10
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
Query: 295 VSDITTACFESSNQLVKCDPRLGKYMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWC 354
VS +T F++ N L CDP G Y+ + G + +EV+ ++++S F W
Sbjct: 178 VSKLTKQMFDAKNMLAACDPCHGCYLMAAPIVGGCMSMREVDEQTYNIQNKYSSYFAHWI 237
Query: 355 PTGFKVGINNRPPTVMPGGDLAKVHRSICMLSNTTAIVE--AWARLDHKFDLMYAKRAFL 412
P + + PP ++ S+ +SN TAI E + + +F + +AFL
Sbjct: 238 PHNVERAACDIPP--------LELKMSVTFISNNTAIQELFRFRCILEQFTAKFRCKAFL 289
Query: 413 HWYLREGMEEAEFLEAREDLAALERDY 439
WY +GM + EF E ++ L +Y
Sbjct: 290 SWYSGKGMHDVEFAEVESNMNNLVSEY 316
>gi|169208124 PREDICTED: similar to hCG1647990 [Homo sapiens]
Length = 198
Score = 61.2 bits (147), Expect = 2e-09
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 22/192 (11%)
Query: 245 ITASLRFEGPLNVDLIEFQTNLVPYPRIHFPMTAFAPIVSADKAYHEQFSVSDITTACFE 304
+T L F LN DL + N V +PR+ F M FAP+ S + ++ +T F+
Sbjct: 4 VTTFLCFPHQLNSDLCKLAVNTVSFPRLQFFMATFAPLTSCGSQLYRALTMPKLTQQVFD 63
Query: 305 SSNQLVKCDPRLGKYMACCLLYRGDVVP--KEVNAAIAATKSRHSVQFVDWCPTGFKVGI 362
+ N ++ P L M ++ P KEVN + + +++ Q
Sbjct: 64 AKN-MMAAPPGLPSSM--------NIHPFMKEVNEQMLSVQNKSRQQLFHGMDANNGQDS 114
Query: 363 NNRPPTVMP--GGDLAKVHRSICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGM 420
+ P+ P GG + + R EA L +F + +A LHWY EGM
Sbjct: 115 HVGHPSSWPQDGGHVRRQQR---------GHPEALHGLSGQFPAVLCGKAVLHWYAGEGM 165
Query: 421 EEAEFLEAREDL 432
E EF EA ++
Sbjct: 166 NEMEFAEAENNM 177
>gi|169218027 PREDICTED: similar to tubulin, gamma 1 [Homo sapiens]
Length = 158
Score = 48.5 bits (114), Expect = 1e-05
Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 10/125 (8%)
Query: 319 YMACCLLYRGDVVPKEVNAAIAATKSRHSVQFVDWCPTGFKVGINNRPPTVMPGGDLAKV 378
Y+A + +G+V P +V+ ++ + R F+ W P +V ++ + P L
Sbjct: 24 YIAILNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRKSPY------LPSA 77
Query: 379 HR-SICMLSNTTAIVEAWARLDHKFDLMYAKRAFLHWYLREGMEEAEFLE---AREDLAA 434
HR S M++N T+I + R ++D + + AFL + +E M + F E +RE +
Sbjct: 78 HRVSGLMMANHTSISSLFERTCRQYDKLRKREAFLEQFRKEDMFKDNFDEMDTSREIVQQ 137
Query: 435 LERDY 439
L +Y
Sbjct: 138 LIDEY 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,482,249
Number of Sequences: 37866
Number of extensions: 706056
Number of successful extensions: 1453
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1370
Number of HSP's gapped (non-prelim): 37
length of query: 446
length of database: 18,247,518
effective HSP length: 105
effective length of query: 341
effective length of database: 14,271,588
effective search space: 4866611508
effective search space used: 4866611508
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.