Guide to the Human Genome
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Name: SUV39H2 Sequence: fasta or formatted (350aa) NCBI GI: 13375930
Description:

suppressor of variegation 3-9 homolog 2

Referenced in:

Histones, Related Proteins, and Modifying Enzymes
Nonhistone Chromosomal Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.9         17           2
 C cysteine            4.3         15           2
 D aspartate           5.7         20           1
 E glutamate           5.4         19           2
 F phenylalanine       4.6         16           2
 G glycine             6.3         22           1
 H histidine           1.4          5           1
 I isoleucine          5.7         20           1
 K lysine              8.0         28           2
 L leucine             6.9         24           3
 M methionine          1.4          5           1
 N asparagine          6.9         24           2
 P proline             5.1         18           2
 Q glutamine           4.6         16           2
 R arginine            5.1         18           2
 S serine              5.7         20           2
 T threonine           5.7         20           1
 V valine              6.0         21           1
 W tryptophan          1.4          5           1
 Y tyrosine            4.9         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   suppressor of variegation 3-9 homolog 2 
SUV39H1               0.575   suppressor of variegation 3-9 homolog 1 
EHMT2                 0.182   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT2                 0.182   euchromatic histone-lysine N-methyltransferase 2 is...
EHMT1                 0.175   euchromatic histone-lysine N-methyltransferase 1 is...
SETMAR                0.147   SET domain and mariner transposase fusion 
NSD1                  0.118   nuclear receptor binding SET domain protein 1 isofor...
NSD1                  0.118   nuclear receptor binding SET domain protein 1 isofor...
SETD2                 0.111   SET domain containing 2 
WHSC1                 0.107   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.107   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.107   Wolf-Hirschhorn syndrome candidate 1 protein isoform...
WHSC1                 0.107   Wolf-Hirschhorn syndrome candidate 1 protein isofor...
ASH1L                 0.101   absent, small, or homeotic 1-like 
EZH1                  0.100   enhancer of zeste homolog 1 
WHSC1L1               0.100   WHSC1L1 protein isoform long 
EZH2                  0.097   enhancer of zeste 2 isoform b 
EZH2                  0.097   enhancer of zeste 2 isoform a 
MLL                   0.091   myeloid/lymphoid or mixed-lineage leukemia protein [...
MLL4                  0.083   myeloid/lymphoid or mixed-lineage leukemia 4 
SETDB1                0.079   SET domain, bifurcated 1 isoform 1 
SETD1B                0.079   SET domain containing 1B 
MLL2                  0.077   myeloid/lymphoid or mixed-lineage leukemia 2 
SETDB1                0.076   SET domain, bifurcated 1 isoform 2 
MLL3                  0.070   myeloid/lymphoid or mixed-lineage leukemia 3 
SETD1A                0.069   SET domain containing 1A 
SETDB2                0.058   SET domain, bifurcated 2 isoform b 
SETDB2                0.058   SET domain, bifurcated 2 isoform a 
SETD8                 0.055   SET domain-containing 8 
SETD5                 0.035   SET domain containing 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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