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Search of human proteins with 13375791
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13375791 akirin 1 isoform 1 [Homo sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13375791 akirin 1 isoform 1 [Homo sapiens] 400 e-112
gi|210147487 akirin 1 isoform 2 [Homo sapiens] 288 3e-78
gi|14149718 akirin 2 [Homo sapiens] 211 2e-55
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 46 2e-05
gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo s... 44 8e-05
gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo sa... 44 8e-05
gi|7706501 WW domain binding protein 11 [Homo sapiens] 44 8e-05
gi|56549694 enabled homolog isoform a [Homo sapiens] 43 2e-04
gi|39930375 enabled homolog isoform b [Homo sapiens] 43 2e-04
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 42 4e-04
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 42 4e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 41 7e-04
gi|14602439 Williams Beuren syndrome chromosome region 14 isofor... 41 7e-04
gi|14602437 Williams Beuren syndrome chromosome region 14 isofor... 41 7e-04
gi|14602435 Williams Beuren syndrome chromosome region 14 isofor... 41 7e-04
gi|14602433 Williams Beuren syndrome chromosome region 14 isofor... 41 7e-04
gi|30039694 zinc finger protein 598 [Homo sapiens] 40 0.001
gi|33356148 formin-like 1 [Homo sapiens] 40 0.002
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 39 0.002
gi|163965366 nascent polypeptide-associated complex alpha subuni... 39 0.002
gi|182765442 homeobox A10 isoform a [Homo sapiens] 39 0.003
gi|50428940 mediator complex subunit 25 [Homo sapiens] 39 0.003
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.003
gi|209977097 tripartite motif-containing 66 [Homo sapiens] 39 0.004
gi|153792110 HEG homolog 1 [Homo sapiens] 39 0.004
gi|146134388 YLP motif containing 1 [Homo sapiens] 38 0.005
gi|11386183 WAS protein family, member 2 [Homo sapiens] 37 0.008
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 37 0.008
gi|114431236 zinc finger protein 462 [Homo sapiens] 37 0.008
gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens] 37 0.008
>gi|13375791 akirin 1 isoform 1 [Homo sapiens]
Length = 192
Score = 400 bits (1027), Expect = e-112
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQ 60
MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQ
Sbjct: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQ 60
Query: 61 PAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP 120
PAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP
Sbjct: 61 PAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP 120
Query: 121 GSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIM 180
GSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIM
Sbjct: 121 GSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIM 180
Query: 181 RRYGTRPTSYVS 192
RRYGTRPTSYVS
Sbjct: 181 RRYGTRPTSYVS 192
>gi|210147487 akirin 1 isoform 2 [Homo sapiens]
Length = 147
Score = 288 bits (736), Expect = 3e-78
Identities = 147/192 (76%), Positives = 147/192 (76%), Gaps = 45/192 (23%)
Query: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQ 60
MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQ
Sbjct: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQ 60
Query: 61 PAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP 120
PAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP
Sbjct: 61 PAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP 120
Query: 121 GSSWMKKDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQYESFVKFTHDQIM 180
EQYESFVKFTHDQIM
Sbjct: 121 ---------------------------------------------EQYESFVKFTHDQIM 135
Query: 181 RRYGTRPTSYVS 192
RRYGTRPTSYVS
Sbjct: 136 RRYGTRPTSYVS 147
>gi|14149718 akirin 2 [Homo sapiens]
Length = 203
Score = 211 bits (538), Expect = 2e-55
Identities = 117/204 (57%), Positives = 143/204 (70%), Gaps = 13/204 (6%)
Query: 1 MACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPP---DAEPPPPFQTQ--TPP 55
MACGATLKR ++F+ LLSP SPKRRRCAPL PT P A F +P
Sbjct: 1 MACGATLKRTLDFDP-LLSPASPKRRRCAPLSAPTSAAASPLSAAAATAASFSAAAASPQ 59
Query: 56 QSLQ-QPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSE-ACASESQPHSSA 113
+ L+ +P+P G T EQI NIKQEY R Q+ RHLE Q++ C S++QPH+
Sbjct: 60 KYLRMEPSPFGDVSSRLTTEQILYNIKQEYKRMQKRRHLETSFQQTDPCCTSDAQPHAFL 119
Query: 114 LTAPSSPG-----SSWMKKDQPTFTLRQVGIICERLLKDYEDKIREEYEQILNTKLAEQY 168
L+ P+SPG SS +KK+QP FTLRQVG+ICERLLK+ E+K+REEYE+ILNTKLAEQY
Sbjct: 120 LSGPASPGTSSAASSPLKKEQPLFTLRQVGMICERLLKEREEKVREEYEEILNTKLAEQY 179
Query: 169 ESFVKFTHDQIMRRYGTRPTSYVS 192
++FVKFTHDQIMRRYG +P SYVS
Sbjct: 180 DAFVKFTHDQIMRRYGEQPASYVS 203
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 45.8 bits (107), Expect = 2e-05
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 22 SPK-RRRCAPLPGPTPGLRPPDAEPPP-PFQTQTPPQSLQQPAPPGSERRLPTPEQIFQN 79
SP+ RRR +P P PT R P PPP +T TPP + P+PP RR P+P +
Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPP-PRRRSPSPRRYSPP 599
Query: 80 IKQEYS 85
I++ YS
Sbjct: 600 IQRRYS 605
Score = 35.8 bits (81), Expect = 0.023
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
Query: 19 SPGSPKRRRCAPLPGP---TPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
SP P RRR P P P TP PP P P + P Q P+PP R P
Sbjct: 562 SPAPPPRRRRTPTPPPRRRTPS-PPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPP 618
Score = 35.4 bits (80), Expect = 0.030
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQP-----APPGSERRLPTP 73
P RRR +P P P P R PPP +T +PP + P +PP R P+P
Sbjct: 554 PTRRRRSPSPAPPPRRRRTPT-PPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSP 608
Score = 30.8 bits (68), Expect = 0.74
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPT 72
SP P +RR A P P P R + PP + +PP +Q + P ++RR P+
Sbjct: 605 SPSPPPKRRTAS-PPPPPKRRASPSPPPKRRVSHSPPP--KQRSSPVTKRRSPS 655
Score = 30.0 bits (66), Expect = 1.3
Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQ 75
SP P +RR +P P P + + PPP Q +P + P+ R+ +P +
Sbjct: 616 SPPPPPKRRASPSPPPKRRV----SHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSR 668
Score = 28.1 bits (61), Expect = 4.8
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSER--RLPTPEQ 75
P +RR +P P P + A PPP PP+ P+PP R P P+Q
Sbjct: 599 PIQRRYSPSPPP----KRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQ 643
Score = 27.3 bits (59), Expect = 8.2
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 6/61 (9%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPPP---PFQTQTPPQSLQQPAP---PGSERRLPT 72
SP +RR A L G + + PP P +T +PP+ ++ +P P R P+
Sbjct: 343 SPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPS 402
Query: 73 P 73
P
Sbjct: 403 P 403
>gi|187829452 autism susceptibility candidate 2 isoform 2 [Homo
sapiens]
Length = 1235
Score = 43.9 bits (102), Expect = 8e-05
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 19/137 (13%)
Query: 8 KRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEP-----------PPPFQTQT--- 53
K P+ FE +L P+ + P P P LR P +P PPP TQ
Sbjct: 286 KEPI-FEPVVLKDPCPQVAQPIPQPQTEPQLRAPSPDPDLVQRTEAPPQPPPLSTQPPQG 344
Query: 54 PPQSLQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSA 113
PP++ QPAP +R P P+ Q + Q Q + + A S S +
Sbjct: 345 PPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYNSS----SLS 400
Query: 114 LTAPSSPGSSWMKKDQP 130
L + SS SS K QP
Sbjct: 401 LNSLSSSRSSTPAKTQP 417
>gi|17864090 autism susceptibility candidate 2 isoform 1 [Homo
sapiens]
Length = 1259
Score = 43.9 bits (102), Expect = 8e-05
Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 19/137 (13%)
Query: 8 KRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEP-----------PPPFQTQT--- 53
K P+ FE +L P+ + P P P LR P +P PPP TQ
Sbjct: 286 KEPI-FEPVVLKDPCPQVAQPIPQPQTEPQLRAPSPDPDLVQRTEAPPQPPPLSTQPPQG 344
Query: 54 PPQSLQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSA 113
PP++ QPAP +R P P+ Q + Q Q + + A S S +
Sbjct: 345 PPEAQLQPAPQPQVQRPPRPQSPTQLLHQNLPPVQAHPSAQSLSQPLSAYNSS----SLS 400
Query: 114 LTAPSSPGSSWMKKDQP 130
L + SS SS K QP
Sbjct: 401 LNSLSSSRSSTPAKTQP 417
>gi|7706501 WW domain binding protein 11 [Homo sapiens]
Length = 641
Score = 43.9 bits (102), Expect = 8e-05
Identities = 25/49 (51%), Positives = 26/49 (53%), Gaps = 7/49 (14%)
Query: 17 LLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPG 65
LL PG P R P PGP PGL P PPP + PP L PAPPG
Sbjct: 457 LLPPGPPPGRPPGPPPGPPPGLPP---GPPP----RGPPPRLPPPAPPG 498
Score = 36.2 bits (82), Expect = 0.018
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
P + + P+PGP P L PP P PP + PP L PPG+ L P
Sbjct: 399 PSQIQAPPMPGPPP-LGPP---PAPPLRPPGPPTGLPPGPPPGAPPFLRPP 445
Score = 33.1 bits (74), Expect = 0.15
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 12/69 (17%)
Query: 17 LLSPGSPKRRRCAPLPGPTPGLRPPD------------AEPPPPFQTQTPPQSLQQPAPP 64
L PG P P PG P LRPP PPP + PP PP
Sbjct: 421 LRPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPP 480
Query: 65 GSERRLPTP 73
G R P P
Sbjct: 481 GPPPRGPPP 489
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 10 PMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP 64
P + AL P P P P P P PP PPPP Q PP PAPP
Sbjct: 323 PAQASVALPPPPGP------PPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPP 371
Score = 29.6 bits (65), Expect = 1.6
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 14 EAALLSPGSPKRRRCAPLPGPTPG---LRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRL 70
+ +L P +P P PGP L PP PPPP T P P PP ++
Sbjct: 304 QGIVLGPLAPPPPPPLP-PGPAQASVALPPPPGPPPPPPLPSTGPP--PPPPPPPLPNQV 360
Query: 71 PTP 73
P P
Sbjct: 361 PPP 363
Score = 27.7 bits (60), Expect = 6.3
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 2 ACGATLKRPMEF---EAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQ-S 57
A A+++ P+ +++ PG + A P + P A PPPP P Q S
Sbjct: 268 AAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQAS 327
Query: 58 LQQPAPPGSERRLPTP 73
+ P PPG P P
Sbjct: 328 VALPPPPGPPPPPPLP 343
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 42.7 bits (99), Expect = 2e-04
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 6/55 (10%)
Query: 10 PMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP 64
P + AL P P P P P P PP PPPP Q PP PAPP
Sbjct: 323 PAQASVALPPPPGP------PPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPP 371
Score = 29.6 bits (65), Expect = 1.6
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 6/63 (9%)
Query: 14 EAALLSPGSPKRRRCAPLPGPTPG---LRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRL 70
+ +L P +P P PGP L PP PPPP T P P PP ++
Sbjct: 304 QGIVLGPLAPPPPPPLP-PGPAQASVALPPPPGPPPPPPLPSTGPP--PPPPPPPLPNQV 360
Query: 71 PTP 73
P P
Sbjct: 361 PPP 363
Score = 27.7 bits (60), Expect = 6.3
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
Query: 2 ACGATLKRPMEF---EAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQ-S 57
A A+++ P+ +++ PG + A P + P A PPPP P Q S
Sbjct: 268 AAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQAS 327
Query: 58 LQQPAPPGSERRLPTP 73
+ P PPG P P
Sbjct: 328 VALPPPPGPPPPPPLP 343
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 11 MEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRL 70
+ F A +PG APLP PTPG PP + P P + P Q + P P +
Sbjct: 925 LAFGVASATPGP-----AAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP 979
Query: 71 PTP 73
P P
Sbjct: 980 PVP 982
Score = 31.2 bits (69), Expect = 0.57
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 23 PKRRRCAPLPGPTPG-------LRPPDAEPPPPFQTQTPPQSLQQPAP 63
P+ +P PGP PG L P A PP P + + SL +P P
Sbjct: 677 PQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGP 724
Score = 30.8 bits (68), Expect = 0.74
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPP--QSLQ 59
A G + A P P +R + + GP+P PP E P P + T P ++L
Sbjct: 768 ARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPE-PPPLDESPGPKEGATGPRRRTLS 826
Query: 60 QPAPPGSERRLPTP 73
+PA P P P
Sbjct: 827 EPAGPSEPPGPPAP 840
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 41.6 bits (96), Expect = 4e-04
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 11 MEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRL 70
+ F A +PG APLP PTPG PP + P P + P Q + P P +
Sbjct: 1007 LAFGVASATPGP-----AAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTPLAPSPAMQP 1061
Query: 71 PTP 73
P P
Sbjct: 1062 PVP 1064
Score = 31.2 bits (69), Expect = 0.57
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 23 PKRRRCAPLPGPTPG-------LRPPDAEPPPPFQTQTPPQSLQQPAP 63
P+ +P PGP PG L P A PP P + + SL +P P
Sbjct: 759 PQGSPSSPAPGPPPGAPWAFSYLAGPPATPPDPPRPKRRSHSLSRPGP 806
Score = 30.8 bits (68), Expect = 0.74
Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 3/74 (4%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPP--QSLQ 59
A G + A P P +R + + GP+P PP E P P + T P ++L
Sbjct: 850 ARGTPRSQSFALRARRKGPPPPPPKRLSSVSGPSPE-PPPLDESPGPKEGATGPRRRTLS 908
Query: 60 QPAPPGSERRLPTP 73
+PA P P P
Sbjct: 909 EPAGPSEPPGPPAP 922
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 40.8 bits (94), Expect = 7e-04
Identities = 21/45 (46%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP 64
P P R PLP P PG P PPPP PP S PAPP
Sbjct: 370 PPPPATGRSGPLPPPPPGAGGPPMPPPPP-PPPPPPSSGNGPAPP 413
Score = 30.0 bits (66), Expect = 1.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Query: 21 GSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP 64
G P R P P P P PPPP PP P PP
Sbjct: 358 GPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPP 401
Score = 27.7 bits (60), Expect = 6.3
Identities = 21/64 (32%), Positives = 23/64 (35%), Gaps = 16/64 (25%)
Query: 26 RRCAPLPGPTPGLR-------PPDAE---------PPPPFQTQTPPQSLQQPAPPGSERR 69
RR PLP P P R PP PP P PP + + P PPG
Sbjct: 308 RRQEPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGP 367
Query: 70 LPTP 73
P P
Sbjct: 368 PPPP 371
>gi|14602439 Williams Beuren syndrome chromosome region 14 isoform
delta [Homo sapiens]
Length = 831
Score = 40.8 bits (94), Expect = 7e-04
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 7 LKRPMEFEAALLSPGSPKRR----RCAPLPGPTPGLRPPDAEPPPPFQTQTPP------Q 56
L+ P+ L SPGSP+ C LP PTP PP P P + P +
Sbjct: 541 LEPPLVSSTLLRSPGSPQETVPEFPCTFLP-PTPAPTPPRPPPGPATLAPSRPLLVPKAE 599
Query: 57 SLQQPAPPGSERRL 70
L PAP GSERRL
Sbjct: 600 RLSPPAPSGSERRL 613
Score = 35.4 bits (80), Expect = 0.030
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLR-PPDAE-------PPPPFQTQT 53
+C L + L P PK R P P P P L PP A+ PPPPF
Sbjct: 361 SCPGPLDSSAFLSSDFLLPEDPKPR-LPPPPVPPPLLHYPPPAKVPGLEPCPPPPFPPMA 419
Query: 54 PPQSLQQPAPPGSER 68
PP +L Q P S R
Sbjct: 420 PPTALLQEEPLFSPR 434
>gi|14602437 Williams Beuren syndrome chromosome region 14 isoform
gamma [Homo sapiens]
Length = 850
Score = 40.8 bits (94), Expect = 7e-04
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 7 LKRPMEFEAALLSPGSPKRR----RCAPLPGPTPGLRPPDAEPPPPFQTQTPP------Q 56
L+ P+ L SPGSP+ C LP PTP PP P P + P +
Sbjct: 541 LEPPLVSSTLLRSPGSPQETVPEFPCTFLP-PTPAPTPPRPPPGPATLAPSRPLLVPKAE 599
Query: 57 SLQQPAPPGSERRL 70
L PAP GSERRL
Sbjct: 600 RLSPPAPSGSERRL 613
Score = 35.4 bits (80), Expect = 0.030
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLR-PPDAE-------PPPPFQTQT 53
+C L + L P PK R P P P P L PP A+ PPPPF
Sbjct: 361 SCPGPLDSSAFLSSDFLLPEDPKPR-LPPPPVPPPLLHYPPPAKVPGLEPCPPPPFPPMA 419
Query: 54 PPQSLQQPAPPGSER 68
PP +L Q P S R
Sbjct: 420 PPTALLQEEPLFSPR 434
>gi|14602435 Williams Beuren syndrome chromosome region 14 isoform
beta [Homo sapiens]
Length = 833
Score = 40.8 bits (94), Expect = 7e-04
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 7 LKRPMEFEAALLSPGSPKRR----RCAPLPGPTPGLRPPDAEPPPPFQTQTPP------Q 56
L+ P+ L SPGSP+ C LP PTP PP P P + P +
Sbjct: 541 LEPPLVSSTLLRSPGSPQETVPEFPCTFLP-PTPAPTPPRPPPGPATLAPSRPLLVPKAE 599
Query: 57 SLQQPAPPGSERRL 70
L PAP GSERRL
Sbjct: 600 RLSPPAPSGSERRL 613
Score = 35.4 bits (80), Expect = 0.030
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLR-PPDAE-------PPPPFQTQT 53
+C L + L P PK R P P P P L PP A+ PPPPF
Sbjct: 361 SCPGPLDSSAFLSSDFLLPEDPKPR-LPPPPVPPPLLHYPPPAKVPGLEPCPPPPFPPMA 419
Query: 54 PPQSLQQPAPPGSER 68
PP +L Q P S R
Sbjct: 420 PPTALLQEEPLFSPR 434
>gi|14602433 Williams Beuren syndrome chromosome region 14 isoform
alpha [Homo sapiens]
Length = 852
Score = 40.8 bits (94), Expect = 7e-04
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 7 LKRPMEFEAALLSPGSPKRR----RCAPLPGPTPGLRPPDAEPPPPFQTQTPP------Q 56
L+ P+ L SPGSP+ C LP PTP PP P P + P +
Sbjct: 541 LEPPLVSSTLLRSPGSPQETVPEFPCTFLP-PTPAPTPPRPPPGPATLAPSRPLLVPKAE 599
Query: 57 SLQQPAPPGSERRL 70
L PAP GSERRL
Sbjct: 600 RLSPPAPSGSERRL 613
Score = 35.4 bits (80), Expect = 0.030
Identities = 27/75 (36%), Positives = 31/75 (41%), Gaps = 9/75 (12%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLR-PPDAE-------PPPPFQTQT 53
+C L + L P PK R P P P P L PP A+ PPPPF
Sbjct: 361 SCPGPLDSSAFLSSDFLLPEDPKPR-LPPPPVPPPLLHYPPPAKVPGLEPCPPPPFPPMA 419
Query: 54 PPQSLQQPAPPGSER 68
PP +L Q P S R
Sbjct: 420 PPTALLQEEPLFSPR 434
>gi|30039694 zinc finger protein 598 [Homo sapiens]
Length = 904
Score = 40.4 bits (93), Expect = 0.001
Identities = 34/115 (29%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 3 CGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTP---PQSLQ 59
C + P F A +L G+P P P PGL PP ++PPP F P P +
Sbjct: 676 CPPRMPPPPGFSAVVLLKGTP--------PPPPPGLVPPISKPPPGFSGLLPSPHPACVP 727
Query: 60 QPA---PPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHS 111
PA + R LP P Q + + L EA SE + HS
Sbjct: 728 SPATTTTTKAPRLLPAPRAYLVPENFRERNLQLIQSIRDFLQSDEARFSEFKSHS 782
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 39.7 bits (91), Expect = 0.002
Identities = 22/48 (45%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQ--TPPQSLQQPAPPG 65
PGSP+ PLPG P PP PPPP T PP P PPG
Sbjct: 569 PGSPEPPPAPPLPGDLP---PPPPPPPPPPGTDGPVPPPPPPPPPPPG 613
Score = 36.2 bits (82), Expect = 0.018
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAEPPP--PFQTQTPPQSLQQPAPPGSERRLPTP 73
PG P + P P P EPPP P PP P PPG++ +P P
Sbjct: 549 PGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPP 604
Score = 33.1 bits (74), Expect = 0.15
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 3/46 (6%)
Query: 29 APLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPE 74
AP P PG PP PPPP PQ APP + +PE
Sbjct: 531 APAAEPAPGAAPP---PPPPLPGLPSPQEAPPSAPPQAPPLPGSPE 573
Score = 27.3 bits (59), Expect = 8.2
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 34 PTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQ 75
PTPG+ P P P P P PP LP+P++
Sbjct: 517 PTPGV--PTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQE 556
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 39.3 bits (90), Expect = 0.002
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 10/108 (9%)
Query: 30 PLPGPTPGLRPPDAEPPPPF-----QTQTPPQSLQQPAPPGSERRLPTPEQIFQNIKQEY 84
P P P P L PP PPPP +PP P PP E + +P + +
Sbjct: 409 PAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPPPV---VPATC 465
Query: 85 SRYQRWRHLEVVLNQSEACASESQPHSSALTAPS-SPGSSWMKKDQPT 131
SR +R R ++E A+ + P ++ P+ S + +D PT
Sbjct: 466 SR-KRGRPPLTPSQRAEREAARAGPEGTSPPTPTPSTATGGPPEDSPT 512
Score = 37.7 bits (86), Expect = 0.006
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Query: 34 PTPGLRPPDAEPPPPF---QTQTPPQSLQQPAPPGSERRLPTP 73
P P L PP PPPP T PP P PP S LP+P
Sbjct: 402 PPPPLTPPAPSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSP 444
Score = 28.9 bits (63), Expect = 2.8
Identities = 28/108 (25%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 17 LLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQI 76
+L PG+P+R +P+ P LRP PPP ++ P S R P
Sbjct: 1826 VLVPGAPERH--SPIQNLDPPLRPDSGSAPPPAPRSFSGARIK--VPNYSPSRRPLGGVS 1881
Query: 77 FQNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSPGSSW 124
F + S H+ V + S L AP P S W
Sbjct: 1882 FGPLPSPGSPSSLTHHIPTVGDPDFPAPPRRSRRPSPL-APRPPPSRW 1928
Score = 28.9 bits (63), Expect = 2.8
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 4/59 (6%)
Query: 18 LSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQI 76
L+P P R +P +P LR P PP T P S + APPG P PE +
Sbjct: 1919 LAPRPPPSRWASPPLKTSPQLRVP---PPTSVVTALTPTS-GELAPPGPAPSPPPPEDL 1973
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 35 TPGLRPPDAEPPPPFQTQTP-PQSLQQPAPPGSERRLPTPEQ 75
+P LRPP PP Q P P + P PP + +P PE+
Sbjct: 560 SPVLRPPITTSPPVPQEPAPVPSPPRAPTPPSTP--VPLPEK 599
Score = 27.3 bits (59), Expect = 8.2
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Query: 39 RPPDAEPPP---PFQTQTPPQSLQQPAPPGSERRLPTP 73
+PP E P P T +PP Q+PAP S R PTP
Sbjct: 553 KPPKVEVSPVLRPPITTSPPVP-QEPAPVPSPPRAPTP 589
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.3 bits (90), Expect = 0.002
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 4 GATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAP 63
G P + A ++ SPK+ R P P P P P PP TPP PA
Sbjct: 899 GPATPAPKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPP--AATPPSPKGGPAT 956
Query: 64 PGSERRLPTP 73
P S + PTP
Sbjct: 957 P-SPKWAPTP 965
Score = 31.2 bits (69), Expect = 0.57
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 10/64 (15%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPPPPF---QTQTP-----PQSLQQPAPPGSERRL 70
+P SPK P P P PP A PP P T +P P ++ P+P GS
Sbjct: 969 TPPSPKGGPATPSPKGAP--TPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAAT 1026
Query: 71 PTPE 74
P P+
Sbjct: 1027 PFPK 1030
Score = 30.0 bits (66), Expect = 1.3
Identities = 21/64 (32%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 6 TLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQT---PPQSLQQPA 62
+LK+ A P +P + LP TP P EPP P Q T P ++ PA
Sbjct: 1442 SLKKAPATSAPKGGPATPSSKGDPTLPAVTP---PSPKEPPAPKQVATSSSPKKAPATPA 1498
Query: 63 PPGS 66
P G+
Sbjct: 1499 PMGA 1502
Score = 29.3 bits (64), Expect = 2.2
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGS 66
+P SPK P P P PP A PP P P P PP +
Sbjct: 946 TPPSPKGGPATPSPKWAP--TPPAATPPSPKGGPATPSPKGAPTPPAA 991
Score = 28.5 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 19 SPGSPKRRRCAPLPGP-TPGLR----PPDAEPPPPFQTQTPPQSLQQPAPPGS 66
+P +P +P GP TP L+ PP A PP P P P PP +
Sbjct: 1056 APTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAA 1108
Score = 28.5 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 21 GSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
G+P P P P GL P + P TPP PA P + PTP
Sbjct: 1216 GAPTTPAATP-PSPKGGLATPSPKGAPTTPAATPPSPKGGPATP-PPKGAPTP 1266
Score = 28.5 bits (62), Expect = 3.7
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 11/62 (17%)
Query: 19 SPGSPKRRRCAPLPG---PTPGLRPPDAE----PPPPFQTQTPPQSLQQPAPPGSERRLP 71
+P SPK P P TP PP + PPP TPP + PP + L
Sbjct: 1224 TPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAA----TPPSLKGGLA 1279
Query: 72 TP 73
TP
Sbjct: 1280 TP 1281
Score = 28.5 bits (62), Expect = 3.7
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQI 76
P P P PP P PP T P+ PP + PTP +
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPP---KGAPTPPAV 1338
Score = 28.1 bits (61), Expect = 4.8
Identities = 22/69 (31%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Query: 5 ATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP 64
AT P AA P A LP P G P + P TPP PA P
Sbjct: 1038 ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097
Query: 65 GSERRLPTP 73
S + P P
Sbjct: 1098 -SPKGAPMP 1105
Score = 28.1 bits (61), Expect = 4.8
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGS 66
P P +PG PP P PP TPP P P +
Sbjct: 1318 PSPKGSPGTPPPKGAPTPP--AVTPPSPKGTPTLPAT 1352
Score = 27.3 bits (59), Expect = 8.2
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 7/60 (11%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPP-PPFQTQTPPQ----SLQQPAPPGSERRLPTP 73
+P SPK P P P PP A PP P TPP + PP + L TP
Sbjct: 1086 TPPSPKGGPATPSPKGAP--MPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATP 1143
Score = 27.3 bits (59), Expect = 8.2
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Query: 16 ALLSPGSPKRRRCAPLPGPTPGLRPPDAEPP---------PPFQTQTPPQSLQQPAPPGS 66
A+++P SPK P P PP A PP PP TPP ++ P+P G+
Sbjct: 1290 AVVTPPSPKGGPATSPPKGAP--TPPAATPPSPKGSPGTPPPKGAPTPP-AVTPPSPKGT 1346
Score = 27.3 bits (59), Expect = 8.2
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Query: 19 SPGSPKRRRCAPLP--GPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
+P SPK P P PTP P + P T P S P P S+ PTP
Sbjct: 1316 TPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEG-PTP 1371
>gi|182765442 homeobox A10 isoform a [Homo sapiens]
Length = 410
Score = 38.9 bits (89), Expect = 0.003
Identities = 21/48 (43%), Positives = 23/48 (47%), Gaps = 6/48 (12%)
Query: 38 LRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQIFQNIKQEYS 85
+ PPD PPPP Q PP QPAP T QNIK+E S
Sbjct: 127 MEPPDGPPPPPQQQPPPPPQPPQPAPQA------TSCSFAQNIKEESS 168
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 38.9 bits (89), Expect = 0.003
Identities = 35/88 (39%), Positives = 39/88 (44%), Gaps = 15/88 (17%)
Query: 2 ACGATLKRPMEFEAALLSPGSPKRRRCAPLPGPTPG--LRP--PDAEP--------PPPF 49
A GAT +P A PG+P+ A P PG LRP P A P PPP
Sbjct: 598 ASGAT-GQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPP 656
Query: 50 QTQTPPQ--SLQQPAPPGSERRLPTPEQ 75
QT PP SL PPG+ LP P Q
Sbjct: 657 QTGVPPPQASLHHLQPPGAPALLPPPHQ 684
Score = 32.3 bits (72), Expect = 0.25
Identities = 18/56 (32%), Positives = 22/56 (39%)
Query: 18 LSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
L P P+ + G T +P PPP Q PP + P PPG R P
Sbjct: 585 LRPPQPQPQGTVGASGATGQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNP 640
Score = 28.5 bits (62), Expect = 3.7
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP 64
P+ PL PG+ PP ++ P P Q PP P PP
Sbjct: 301 PRFSPITPLQQAAPGVGPPFSQAPAP---QLPPGPPGAPKPP 339
Score = 28.1 bits (61), Expect = 4.8
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 21 GSPKRRRCAPL--PGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGS 66
G P + AP PGP +PP A P T P L A PG+
Sbjct: 317 GPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGA 364
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.9 bits (89), Expect = 0.003
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 12/82 (14%)
Query: 1 MACGATLKRPMEFEAALLSPGSP-------KRRRCAPLPGPTPGLRPPDAEPPPPFQTQT 53
+A A + P AA +P SP + +R APL P P P A PP +
Sbjct: 140 VAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRA 199
Query: 54 PPQSLQQPAPPGSERRLPTPEQ 75
PP ++ PP LP P Q
Sbjct: 200 PPPAVAAREPP-----LPPPPQ 216
Score = 36.6 bits (83), Expect = 0.013
Identities = 19/53 (35%), Positives = 23/53 (43%)
Query: 16 ALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSER 68
A+ P P+R + P L PP P PP Q Q PP Q P G+ R
Sbjct: 189 AVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVR 241
>gi|209977097 tripartite motif-containing 66 [Homo sapiens]
Length = 1216
Score = 38.5 bits (88), Expect = 0.004
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQIFQNIKQEYSRYQR 89
PLP P P L PP +P PP S Q +PPG P Q + ++ +
Sbjct: 463 PLPHPPPPLPPPPQQPHPPLPPSQHLASSQHESPPG-----PACSQNMDIMHHKFELEEM 517
Query: 90 WRHLEVVLNQSEACASESQPHS 111
+ LE++L + SQ S
Sbjct: 518 QKDLELLLQAQQPSLQLSQTKS 539
>gi|153792110 HEG homolog 1 [Homo sapiens]
Length = 1381
Score = 38.5 bits (88), Expect = 0.004
Identities = 24/59 (40%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 20 PGSPKRRRCAPLPGPTPGL-----RPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
P SP RR + P GL R P+ EPPP TPP+ + PA PG R P P
Sbjct: 34 PPSPARRALSLAPLAGAGLELQLERRPEREPPP-----TPPRERRGPATPGPSYRAPEP 87
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.1 bits (87), Expect = 0.005
Identities = 39/120 (32%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 10 PMEFEAALLSPGSPKRRRCAP----LPGPTPGLRPPDAEPPPPFQTQTPP-QSLQQPAPP 64
PME E+ SP P P +P P P PP PP Q PP Q +PP
Sbjct: 140 PMELESPPESPPVPPGSYMPPSQSYMPPPQP---PPSYYPPTSSQPYLPPAQPSPSQSPP 196
Query: 65 GSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQSEACASE-SQPHS-SALTAPSSPGS 122
PTP S H + L S+A S SQ HS S L AP P +
Sbjct: 197 SQSYLAPTPSY----SSSSSSSQSYLSHSQSYLPSSQASPSRPSQGHSKSQLLAPPPPSA 252
Score = 33.9 bits (76), Expect = 0.087
Identities = 31/101 (30%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQIFQN 79
PGS R P P RPP PPPP PP P PP P + Q
Sbjct: 1522 PGSIVRPSAPPARSSVPVTRPPVPIPPPP-----PP----PPLPPPPPVIKPQTSAVEQE 1572
Query: 80 IKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSP 120
E S Y W N + SE + ++A+ PS+P
Sbjct: 1573 RWDEDSFYGLWD-----TNDEQGLNSEFKSETAAI--PSAP 1606
Score = 33.5 bits (75), Expect = 0.11
Identities = 32/130 (24%), Positives = 44/130 (33%), Gaps = 14/130 (10%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERR------------LPTPEQIF 77
PLP P PP PPP PPQ P PP S + LPTP
Sbjct: 620 PLP-PLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSFG 678
Query: 78 QNIKQEYSRYQRWRHLEVVLNQSEACASESQPHSSALTAPSSPGSSWMKKDQPTFTLRQV 137
Y + +N + + P+SS ++ G S QP ++ +
Sbjct: 679 SAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSS-FSSDQGLGESSAAPSQPITAVKDM 737
Query: 138 GIICERLLKD 147
+ LL D
Sbjct: 738 PVRSGGLLPD 747
Score = 30.4 bits (67), Expect = 0.97
Identities = 22/58 (37%), Positives = 24/58 (41%), Gaps = 10/58 (17%)
Query: 10 PMEFEAALLSPGSPKRRRCAPLPGPTPGLRPP---DAEPPPPFQTQTPPQSLQQPAPP 64
P ++ PG P A GP P L PP A PPP PP SL APP
Sbjct: 566 PPSLPTSVPPPGMPPSLSSA---GPPPVLPPPSLSSAGPPPVL----PPPSLSSTAPP 616
Score = 30.0 bits (66), Expect = 1.3
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAEP---PPPFQTQTPPQSLQQPA-PPGSERRLPTP 73
P P + PLP P + PP P PP PP + P PP +P P
Sbjct: 519 PFVPYSQMPPPLPTMPPPVLPPSLPPPVMPPALPATVPPPGMPPPVMPPSLPTSVPPP 576
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 8/40 (20%)
Query: 33 GPTPGLRPPD----AEPP----PPFQTQTPPQSLQQPAPP 64
GP P L PP A PP PP + TPP + P P
Sbjct: 600 GPPPVLPPPSLSSTAPPPVMPLPPLSSATPPPGIPPPGVP 639
Score = 28.9 bits (63), Expect = 2.8
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 15 AALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQT 51
A +L P P P PGP P PP ++PPP QT
Sbjct: 1605 APVLPP--PPVHSSIPPPGPVPMGMPPMSKPPPVQQT 1639
Score = 28.5 bits (62), Expect = 3.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 36 PGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLP 71
PG+ PP PP PP S+ +P+ P + +P
Sbjct: 1503 PGMYPPPGSYRPPPPMGKPPGSIVRPSAPPARSSVP 1538
Score = 28.1 bits (61), Expect = 4.8
Identities = 26/93 (27%), Positives = 31/93 (33%), Gaps = 6/93 (6%)
Query: 40 PPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQIFQNIKQEYSRYQRWRHLEVVLNQ 99
PP PPPP Q P PP P P KQ+ ++Q H
Sbjct: 82 PPPPLPPPPVMPGGGYGDWQPPPPP----MPPPPGPALSYQKQQQYKHQMLHHQRDGPPG 137
Query: 100 SEACASESQPHSSALTAPS--SPGSSWMKKDQP 130
ES P S + S P S+M QP
Sbjct: 138 LVPMELESPPESPPVPPGSYMPPSQSYMPPPQP 170
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 37.4 bits (85), Expect = 0.008
Identities = 26/66 (39%), Positives = 30/66 (45%), Gaps = 14/66 (21%)
Query: 15 AALLSPGSPKRRRCAPL---PGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPP----GSE 67
++++SP P PL PGP PG PP A PPPP PP P PP GS
Sbjct: 292 SSVVSPSHPPP--APPLGSPPGPKPGFAPPPAPPPPP-----PPMIGIPPPPPPVGFGSP 344
Query: 68 RRLPTP 73
P P
Sbjct: 345 GTPPPP 350
Score = 29.3 bits (64), Expect = 2.2
Identities = 19/45 (42%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQ-QPA--PPGSERRLP 71
PL PT G PP PPPP P QPA PP S+ P
Sbjct: 382 PLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLSDTTKP 426
Score = 28.9 bits (63), Expect = 2.8
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 6/51 (11%)
Query: 19 SPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQT--PPQSLQQP---APP 64
SPG+P P P P P PPPP PP L QP APP
Sbjct: 343 SPGTPPPPSPPSFP-PHPDFAAPPPPPPPPAADYPTLPPPPLSQPTGGAPP 392
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 6/43 (13%)
Query: 32 PGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSE-RRLPTP 73
PG P PP P P F PP P PP ++ LP P
Sbjct: 344 PGTPPPPSPPSFPPHPDFAAPPPP-----PPPPAADYPTLPPP 381
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 5/43 (11%)
Query: 29 APLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLP 71
AP P P PP PPPP PPQ QQP PP +P
Sbjct: 749 APAPVPQQPPPPPQQPPPPP-----PPQQQQQPPPPPPPPSMP 786
Score = 34.3 bits (77), Expect = 0.067
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 7/53 (13%)
Query: 31 LPGPTPGLRPPDAEPPPP-------FQTQTPPQSLQQPAPPGSERRLPTPEQI 76
LP +PP PPPP Q Q PP QP PP ++ P P +
Sbjct: 945 LPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPV 997
Score = 32.3 bits (72), Expect = 0.25
Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 15/56 (26%)
Query: 32 PGPTPGLRPPDAEPPPPFQTQTPPQS-----------LQQPAPP-GSERRLPTPEQ 75
P P P PP +PPP Q Q PP+ +QQP PP G + P P Q
Sbjct: 974 PPPPP---PPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQ 1026
Score = 30.8 bits (68), Expect = 0.74
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 8/46 (17%)
Query: 32 PGPTPGLRPPDAE----PPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
P P P PP + PPPP Q Q PP P PP S + P
Sbjct: 750 PAPVPQQPPPPPQQPPPPPPPQQQQQPP----PPPPPPSMPQQAAP 791
Score = 30.8 bits (68), Expect = 0.74
Identities = 36/146 (24%), Positives = 52/146 (35%), Gaps = 35/146 (23%)
Query: 9 RPMEFEAALLSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQ--------- 59
+PM+F + P P+ G P PP + PPP Q P Q +Q
Sbjct: 1000 QPMQFSTHIQQPPPPQ--------GQQPP-HPPPGQQPPPPQPAKPQQVIQHHHSPRHHK 1050
Query: 60 -QPAPPGSERRLPTPEQI-------FQNIKQE-------YSRYQRWRHLEVVLNQSEACA 104
P G R P+P I FQ++ + + Q R VV Q
Sbjct: 1051 SDPYSTGHLREAPSPLMIHSPQMSQFQSLTHQSPPQQNVQPKKQELRAASVVQPQPLVVV 1110
Query: 105 SESQPHSSALTAPSSPGSSWMKKDQP 130
E + HS + S P S ++ + P
Sbjct: 1111 KEEKIHSPIIR--SEPFSPSLRPEPP 1134
Score = 30.4 bits (67), Expect = 0.97
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 19/79 (24%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAE----PPPP-----------FQTQTPPQSLQQPAPP 64
P ++ + P P P P +PP + PP P Q PPQ Q P PP
Sbjct: 964 PSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPP 1023
Query: 65 GSERRLP----TPEQIFQN 79
++ P P+Q+ Q+
Sbjct: 1024 PGQQPPPPQPAKPQQVIQH 1042
Score = 29.3 bits (64), Expect = 2.2
Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Query: 20 PGSPKRRRCAPLPGPTPGLRPPDAEP-----PPPF-QTQTPPQSLQQPAPPGS 66
P P +++ P P P P P A P PPPF TQ P + +P PGS
Sbjct: 766 PPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVP---VLEPQLPGS 815
Score = 28.5 bits (62), Expect = 3.7
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAP 63
P ++ P P P +PP PPP Q P P P
Sbjct: 759 PPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPP 799
Score = 28.1 bits (61), Expect = 4.8
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERR 69
P+R P+ P +RPP+ PPP Q Q+P P + ++
Sbjct: 1147 PQRPEMKPVDVGRPVIRPPEQNAPPPGAPDKDKQK-QEPKTPVAPKK 1192
Score = 27.7 bits (60), Expect = 6.3
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 32 PGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAP-PGSERRLPTP 73
P P P + P D P T PPQ LQ P P P + P P
Sbjct: 222 PHPFPAVTP-DLIVQTPVMTVVPPQPLQTPPPVPPQPQPPPAP 263
Score = 27.7 bits (60), Expect = 6.3
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPE 74
P P P + P PPPP Q +++ PP ++P E
Sbjct: 765 PPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPPFIATQVPVLE 809
Score = 27.3 bits (59), Expect = 8.2
Identities = 12/31 (38%), Positives = 15/31 (48%)
Query: 43 AEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
A P P Q PPQ P PP +++ P P
Sbjct: 749 APAPVPQQPPPPPQQPPPPPPPQQQQQPPPP 779
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 37.4 bits (85), Expect = 0.008
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 26 RRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTPEQI 76
R+ + P +PP PPPP + PQ LQQP PP +L P Q+
Sbjct: 528 RKSGVMLDPLQQQQPPQPPPPPPPPPPSQPQPLQQPQPP----QLQPPHQV 574
Score = 34.7 bits (78), Expect = 0.051
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 20 PGSPKRRRCAPLPGPTPG-LRPPDAEPPPPFQTQTPPQSLQQPAPP 64
P P + PL P P L+PP PP P QTQ PP QQP PP
Sbjct: 549 PPPPPPSQPQPLQQPQPPQLQPPHQVPPQP-QTQPPP--TQQPQPP 591
Score = 31.2 bits (69), Expect = 0.57
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 23 PKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQP--APPGSERRLPTPEQ 75
P +++ P P P P PP P P Q PPQ LQ P PP + + P +Q
Sbjct: 536 PLQQQQPPQPPPPPP--PPPPSQPQPLQQPQPPQ-LQPPHQVPPQPQTQPPPTQQ 587
Score = 29.3 bits (64), Expect = 2.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Query: 30 PLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQP---APPGSERRLPT 72
P P P P +P + P P Q Q P Q QP PP + + PT
Sbjct: 547 PPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPPTQQPQPPT 592
>gi|96974985 coiled-coil and C2 domain containing 1A [Homo sapiens]
Length = 951
Score = 37.4 bits (85), Expect = 0.008
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 13 FEAAL--LSPGSPKRRRCAPLPGPTPGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRL 70
F+A L LS G P C P P P PPD P PP Q TP + P +
Sbjct: 293 FDAVLEALSRGEPVDLSCLP---PPPDQLPPDP-PSPPSQPPTPATA------PSTTEVP 342
Query: 71 PTPEQIFQNIKQEYSRYQ 88
P P + + ++Q RYQ
Sbjct: 343 PPPRTLLEALEQRMERYQ 360
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,760,943
Number of Sequences: 37866
Number of extensions: 723939
Number of successful extensions: 11369
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 646
Number of HSP's that attempted gapping in prelim test: 5686
Number of HSP's gapped (non-prelim): 4355
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.