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Search of human proteins with 47825361
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47825361 non-specific cytotoxic cell receptor protein 1
homolog [Homo sapiens]
(275 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 578 e-165
gi|15812198 F-box only protein 2 [Homo sapiens] 100 2e-21
gi|8922188 F-box only protein 6 [Homo sapiens] 96 4e-20
gi|34878735 F-box protein 44 isoform 1 [Homo sapiens] 85 6e-17
gi|62388868 F-box protein 44 isoform 1 [Homo sapiens] 85 6e-17
gi|30520327 F-box protein 27 [Homo sapiens] 79 3e-15
gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens] 75 8e-14
gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens] 75 8e-14
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 55 5e-08
gi|56549694 enabled homolog isoform a [Homo sapiens] 51 1e-06
gi|39930375 enabled homolog isoform b [Homo sapiens] 51 1e-06
gi|4507691 transformation/transcription domain-associated protei... 51 1e-06
gi|52485606 formin-like 2 [Homo sapiens] 51 1e-06
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 49 6e-06
gi|150170670 piccolo isoform 2 [Homo sapiens] 48 8e-06
gi|150378539 piccolo isoform 1 [Homo sapiens] 48 8e-06
gi|157168329 formin 1 [Homo sapiens] 48 1e-05
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 48 1e-05
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 48 1e-05
gi|29789008 Huntingtin interacting protein C isoform 2 [Homo sap... 48 1e-05
gi|72534686 Huntingtin interacting protein C isoform 1 [Homo sap... 48 1e-05
gi|21389577 hypothetical protein LOC146705 [Homo sapiens] 48 1e-05
gi|153792074 proline rich 12 [Homo sapiens] 47 1e-05
gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo s... 47 2e-05
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 46 3e-05
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 46 3e-05
gi|61966741 TMF regulated nuclear protein [Homo sapiens] 46 4e-05
gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase... 45 5e-05
gi|33286436 gametogenetin [Homo sapiens] 45 7e-05
gi|194272180 plexin B1 [Homo sapiens] 45 9e-05
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 578 bits (1490), Expect = e-165
Identities = 275/275 (100%), Positives = 275/275 (100%)
Query: 1 MEEVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPE 60
MEEVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPE
Sbjct: 1 MEEVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPE 60
Query: 61 PAQPSEAHARQLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPA 120
PAQPSEAHARQLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPA
Sbjct: 61 PAQPSEAHARQLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPA 120
Query: 121 PPTGPTQRPLETLGNFRGWYIRTEKLQQNQSWTVKQQCVDLLAEGLWEELLDDEQPAITV 180
PPTGPTQRPLETLGNFRGWYIRTEKLQQNQSWTVKQQCVDLLAEGLWEELLDDEQPAITV
Sbjct: 121 PPTGPTQRPLETLGNFRGWYIRTEKLQQNQSWTVKQQCVDLLAEGLWEELLDDEQPAITV 180
Query: 181 MDWFEDSRLDACVYELHVWLLAADRRTVIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPG 240
MDWFEDSRLDACVYELHVWLLAADRRTVIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPG
Sbjct: 181 MDWFEDSRLDACVYELHVWLLAADRRTVIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPG 240
Query: 241 VRFIHFLHKAKNRMEPGGLRRTRVTDSSVSVQLRE 275
VRFIHFLHKAKNRMEPGGLRRTRVTDSSVSVQLRE
Sbjct: 241 VRFIHFLHKAKNRMEPGGLRRTRVTDSSVSVQLRE 275
>gi|15812198 F-box only protein 2 [Homo sapiens]
Length = 296
Score = 99.8 bits (247), Expect = 2e-21
Identities = 94/302 (31%), Positives = 129/302 (42%), Gaps = 50/302 (16%)
Query: 14 MEADG-PASLQELPPSPRSPSPPPSPPPLPSPPSLP--------SPAAPEAPELPEP--- 61
M+ DG P S+ + P SP P + P + AA ELPEP
Sbjct: 1 MDGDGDPESVGQ----PEEASPEEQPEEASAEEERPEDQQEEEAAAAAAYLDELPEPLLL 56
Query: 62 ----AQPSE--AHARQLLLEEWGPLSGGLEL-----------------PQRLTWKLLLLR 98
A P+ A +L+ W L G L +R W+
Sbjct: 57 RVLAALPAAELVQACRLVCLRWKELVDGAPLWLLKCQQEGLVPEGGVEEERDHWQQFYFL 116
Query: 99 RPLYRNLLRSP-NPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQQ----NQSWT 153
RNLLR+P E + + G R E G+ + E +++ + W
Sbjct: 117 SKRRRNLLRNPCGEEDLEGWCDVEHGGDGWRVEELPGDSGVEFTHDESVKKYFASSFEWC 176
Query: 154 VKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIAQH- 212
K Q +DL AEG WEELLD QPAI V DW+ C+YEL V LL ++ V+A+
Sbjct: 177 RKAQVIDLQAEGYWEELLDTTQPAIVVKDWYSGRSDAGCLYELTVKLL-SEHENVLAEFS 235
Query: 213 --HVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTDSSVS 270
VA G G W+++SH F YGPGVRF+ F H ++ + G RVT+SSV
Sbjct: 236 SGQVAVPQDSDG--GGWMEISHTFTDYGPGVRFVRFEHGGQDSVYWKGWFGARVTNSSVW 293
Query: 271 VQ 272
V+
Sbjct: 294 VE 295
>gi|8922188 F-box only protein 6 [Homo sapiens]
Length = 293
Score = 95.5 bits (236), Expect = 4e-20
Identities = 65/184 (35%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 92 WKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQQ--- 148
WK+ R L+RNLLR+P E G + +E+L G K+++
Sbjct: 75 WKIFYFLRSLHRNLLRNPCAEEDMFAWQIDFNGGDRWKVESLPGAHGTDFPDPKVKKYFV 134
Query: 149 -NQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRT 207
+ +K Q VDL+AEG WEELLD +P I V DWF C Y+L V L +AD
Sbjct: 135 TSYEMCLKSQLVDLVAEGYWEELLDTFRPDIVVKDWFAARADCGCTYQLKVQLASAD-YF 193
Query: 208 VIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTDS 267
V+A P T + W +VS+ F Y GVR+I F H ++ G RVT+S
Sbjct: 194 VLASFEPPPVTIQQWNNATWTEVSYTFSDYPRGVRYILFQHGGRDTQYWAGWYGPRVTNS 253
Query: 268 SVSV 271
S+ V
Sbjct: 254 SIVV 257
>gi|34878735 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 85.1 bits (209), Expect = 6e-17
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 92 WKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQQ--- 148
WK+ R L+RNLL +P E + G + +E L + +++++
Sbjct: 68 WKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQVKKYFV 127
Query: 149 -NQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRT 207
+ +K Q VDL AEG WEEL+D +P I V DWF Y+L V LL++
Sbjct: 128 TSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQLLSS-AHA 186
Query: 208 VIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTDS 267
+ P T + +W +VSH F +Y PGVR+I F H + G RVT+S
Sbjct: 187 PLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWYGPRVTNS 246
Query: 268 SVSV 271
S+++
Sbjct: 247 SITI 250
>gi|62388868 F-box protein 44 isoform 1 [Homo sapiens]
Length = 255
Score = 85.1 bits (209), Expect = 6e-17
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 5/184 (2%)
Query: 92 WKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQQ--- 148
WK+ R L+RNLL +P E + G + +E L + +++++
Sbjct: 68 WKIFYFLRSLHRNLLHNPCAEEGFEFWSLDVNGGDEWKVEDLSRDQRKEFPNDQVKKYFV 127
Query: 149 -NQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRT 207
+ +K Q VDL AEG WEEL+D +P I V DWF Y+L V LL++
Sbjct: 128 TSYYTCLKSQVVDLKAEGYWEELMDTTRPDIEVKDWFAARPDCGSKYQLCVQLLSS-AHA 186
Query: 208 VIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTDS 267
+ P T + +W +VSH F +Y PGVR+I F H + G RVT+S
Sbjct: 187 PLGTFQPDPATIQQKSDAKWREVSHTFSNYPPGVRYIWFQHGGVDTHYWAGWYGPRVTNS 246
Query: 268 SVSV 271
S+++
Sbjct: 247 SITI 250
>gi|30520327 F-box protein 27 [Homo sapiens]
Length = 283
Score = 79.3 bits (194), Expect = 3e-15
Identities = 60/189 (31%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 98 RRPLYRNLLRSP-NPEGINIYEPAPPTGPTQRPLETLGNFRGWYIRTEKLQ--------- 147
RRP+ RNL+R+P EG+ R GW + +
Sbjct: 107 RRPIGRNLIRNPCGQEGL-------------RKWMVQHGGDGWVVEENRTTVPGAPSQTC 153
Query: 148 --QNQSWTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADR 205
+ SW K+Q +DL EGLW ELLD + I V DW+ C+Y L V LL A+
Sbjct: 154 FVTSFSWCCKKQVLDLEEEGLWPELLDSGRIEICVSDWWGARHDSGCMYRLLVQLLDAN- 212
Query: 206 RTVIAQHHVAPRTSGRGPPGRWVQVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVT 265
+TV+ + P + + V+HVF + GVRF+ F H+ ++ G RVT
Sbjct: 213 QTVLDKFSAVPDPIPQWNNNACLHVTHVFSNIKMGVRFVSFEHRGQDTQFWAGHYGARVT 272
Query: 266 DSSVSVQLR 274
+SSV V++R
Sbjct: 273 NSSVIVRVR 281
>gi|22325388 F-box protein FBG4 isoform 1 [Homo sapiens]
Length = 287
Score = 74.7 bits (182), Expect = 8e-14
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 152 WTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIAQ 211
W K+Q VDL+ EG+W+ELLD Q I V DW+ CVY+L V LL + +
Sbjct: 164 WCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLD------VYE 217
Query: 212 HHVAPRTSGRGPPGRWV-----QVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTD 266
V ++ P +W QVSHVF ++G G+R++ F ++ G VT
Sbjct: 218 KEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTH 277
Query: 267 SSVSVQLR 274
SSV V++R
Sbjct: 278 SSVRVRIR 285
>gi|18643385 F-box protein FBG4 isoform 2 [Homo sapiens]
Length = 278
Score = 74.7 bits (182), Expect = 8e-14
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 152 WTVKQQCVDLLAEGLWEELLDDEQPAITVMDWFEDSRLDACVYELHVWLLAADRRTVIAQ 211
W K+Q VDL+ EG+W+ELLD Q I V DW+ CVY+L V LL + +
Sbjct: 155 WCSKRQLVDLVMEGVWQELLDSAQIEICVADWWGARENCGCVYQLRVRLLD------VYE 208
Query: 212 HHVAPRTSGRGPPGRWV-----QVSHVFRHYGPGVRFIHFLHKAKNRMEPGGLRRTRVTD 266
V ++ P +W QVSHVF ++G G+R++ F ++ G VT
Sbjct: 209 KEVVKFSASPDPVLQWTERGCRQVSHVFTNFGKGIRYVSFEQYGRDVSSWVGHYGALVTH 268
Query: 267 SSVSVQLR 274
SSV V++R
Sbjct: 269 SSVRVRIR 276
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 55.5 bits (132), Expect = 5e-08
Identities = 42/127 (33%), Positives = 52/127 (40%), Gaps = 9/127 (7%)
Query: 6 EGHALGGGMEADGPASLQELPPS---PRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPA 62
EG + GG + LPP P P PPP PPP P PP LP A +L +P
Sbjct: 221 EGLSPGGKRRRGCNSEQTGLPPGLPLPPPPLPPPPPPPPPPPPPLPGLATSPPFQLTKPG 280
Query: 63 QPSEAHARQLLLEEWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPP 122
S H + WGP G P+R + L Y + +P G + PA P
Sbjct: 281 LWSTLHG-----DAWGPERKGSAPPERQEQRHSLPHPYPYPAPAYTAHPPGHRLV-PAAP 334
Query: 123 TGPTQRP 129
GP RP
Sbjct: 335 PGPGPRP 341
Score = 38.9 bits (89), Expect = 0.005
Identities = 28/96 (29%), Positives = 37/96 (38%), Gaps = 17/96 (17%)
Query: 34 PPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGPLSGGLELPQRLTWK 93
PPP+ PP P P P+ P+ P P P+ S LL+ + G + R T
Sbjct: 771 PPPALPPPPPLAKFPPPSQPQPPPPPPPSPAS-------LLKSLASVLEGQKYCYRGTGA 823
Query: 94 LLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRP 129
+ R P P Y P PP+G T P
Sbjct: 824 AVSTR----------PGPLPTTQYSPGPPSGATALP 849
Score = 33.9 bits (76), Expect = 0.16
Identities = 18/36 (50%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
Query: 25 LPPSPRSPSPPPSP---PPLPSPPSLPSPAAPEAPE 57
LPP P SP PPP P P P P L PA A E
Sbjct: 461 LPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAARE 496
Score = 33.5 bits (75), Expect = 0.21
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGP 79
PP+ +P P+P P+PPS P E P P S A +L GP
Sbjct: 1046 PPTAPAPPSAPAPSAQPTPPSASVPGKKAREEAPGPPGVSRADMLKLRSLSEGP 1099
Score = 32.7 bits (73), Expect = 0.35
Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 13 GMEADGPASLQELPPSP---RSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAH 68
G + PA PP P RS P P PP P P P P LP PA PS H
Sbjct: 559 GSHSSSPAGPVSFPPPPYLARSIDPLPRPPSPAQNPQDP-PLVPLTLALP-PAPPSSCH 615
Score = 29.6 bits (65), Expect = 3.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 5/43 (11%)
Query: 25 LPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEA 67
LP + SP PP LP P+ AAP A P+P+ S +
Sbjct: 832 LPTTQYSPGPPSGATALP-----PTSAAPSAQGSPQPSASSSS 869
Score = 28.9 bits (63), Expect = 5.1
Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 15/57 (26%)
Query: 19 PASLQELPPSPRSPSP---PPSPPPLPSPPSLPSPAAPEA-----------PELPEP 61
P + + P PR PSP P PP +P +LP PA P + PE P P
Sbjct: 575 PYLARSIDPLPRPPSPAQNPQDPPLVPLTLALP-PAPPSSCHQNTSGSFRRPESPRP 630
Score = 28.9 bits (63), Expect = 5.1
Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 5/43 (11%)
Query: 26 PPSPRSPSPPPSPP-----PLPSPPSLPSPAAPEAPELPEPAQ 63
PP P S +P P PP P P P P + EPA+
Sbjct: 645 PPGPLSKAPQPVPPGVGELPARGPRLFDFPPTPLEDQFEEPAE 687
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 50.8 bits (120), Expect = 1e-06
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 18 GPASLQ-ELPPSPRSPSPPP----SPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQL 72
GPA LPP P P PPP PPP P PP LP+ P P P P P+
Sbjct: 322 GPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLAS 381
Query: 73 LLEEWGPLSG 82
+ E+ PL+G
Sbjct: 382 MSEDNRPLTG 391
Score = 34.3 bits (77), Expect = 0.12
Identities = 19/50 (38%), Positives = 20/50 (40%)
Query: 12 GGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEP 61
G A PA P PP PPPLP P+ S A P P P P
Sbjct: 290 GLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPP 339
Score = 32.0 bits (71), Expect = 0.60
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 14 MEADGPASLQELPPSPRSPSPPPSPPPLPSPPS 46
+ + GP PP P PPP PPP P P+
Sbjct: 342 LPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPA 374
Score = 28.9 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 26 PPSPRSPSPPPSPPPLPSPP--SLPSPAAPEAPELPEPAQP 64
PP P P P + LP PP P P P P P P
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPP 355
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 50.8 bits (120), Expect = 1e-06
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 18 GPASLQ-ELPPSPRSPSPPP----SPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQL 72
GPA LPP P P PPP PPP P PP LP+ P P P P P+
Sbjct: 322 GPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPASGFFLAS 381
Query: 73 LLEEWGPLSG 82
+ E+ PL+G
Sbjct: 382 MSEDNRPLTG 391
Score = 34.3 bits (77), Expect = 0.12
Identities = 19/50 (38%), Positives = 20/50 (40%)
Query: 12 GGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEP 61
G A PA P PP PPPLP P+ S A P P P P
Sbjct: 290 GLQAASQPAETPSQQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPP 339
Score = 32.0 bits (71), Expect = 0.60
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 14 MEADGPASLQELPPSPRSPSPPPSPPPLPSPPS 46
+ + GP PP P PPP PPP P P+
Sbjct: 342 LPSTGPPPPPPPPPLPNQVPPPPPPPPAPPLPA 374
Score = 28.9 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 26 PPSPRSPSPPPSPPPLPSPP--SLPSPAAPEAPELPEPAQP 64
PP P P P + LP PP P P P P P P
Sbjct: 315 PPPPLPPGPAQASVALPPPPGPPPPPPLPSTGPPPPPPPPP 355
>gi|4507691 transformation/transcription domain-associated protein
[Homo sapiens]
Length = 3830
Score = 50.8 bits (120), Expect = 1e-06
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 20 ASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSE 66
A+L +P +P +P P PSP P+P+PP P P P P P P P E
Sbjct: 482 AALPGVPTAPAAPGPAPSPAPVPAPPPPPPPPPPATPVTPAPVPPFE 528
Score = 33.1 bits (74), Expect = 0.27
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 9/42 (21%)
Query: 16 ADGPASLQELPPSPRS-PSPPPSPPPLPSPPSLPSPAAPEAP 56
A GPA PSP P+PPP PP P PP+ P AP P
Sbjct: 493 APGPA------PSPAPVPAPPPPPP--PPPPATPVTPAPVPP 526
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 50.8 bits (120), Expect = 1e-06
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 13/61 (21%)
Query: 17 DGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAA------------PEAPELPEPAQP 64
+GP + +PP P P PPP PPP P PP LP PAA P AP LP + P
Sbjct: 545 NGPVT-PPMPPPPPPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGTSSP 603
Query: 65 S 65
+
Sbjct: 604 T 604
Score = 45.8 bits (107), Expect = 4e-05
Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 5/47 (10%)
Query: 16 ADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPA 62
+D P ++Q P +P P PPP PPP P PP P P P LP PA
Sbjct: 537 SDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPP-----PPLPGPA 578
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/76 (38%), Positives = 33/76 (43%), Gaps = 15/76 (19%)
Query: 3 EVREGHALGGGMEADGPASLQELPPSPRSPSPP-----------PSPPPLPSPPSLPSPA 51
EV G+++G M G AS LPP P P PP P PP+P PP P P
Sbjct: 507 EVVAGNSVGPTM---GAASSGPLPPPP-PPLPPSSDTPETVQNGPVTPPMPPPPPPPPPP 562
Query: 52 APEAPELPEPAQPSEA 67
P P P P P A
Sbjct: 563 PPPPPPPPPPPLPGPA 578
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 48.5 bits (114), Expect = 6e-06
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 11 GGGMEADGP-ASLQELPPSPRSPSPP---PSPPPLPSPPSLPSPAAPEAPELPEPAQPSE 66
GGG + P A+ PP P P+PP P PPP P+PP P PA P+ P E P
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEA 65
Query: 67 A 67
A
Sbjct: 66 A 66
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 24 ELPPSPRSPSPPPSPPPLP---SPPSLPSPAAPEAPELPEPAQPSEAHA 69
E P + +P PPP PPP P PP P PA P P P P A A
Sbjct: 12 ESPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEA 60
Score = 38.1 bits (87), Expect = 0.008
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
PA Q+ PP P P+PPP P P+PP P A PE + P
Sbjct: 28 PAPPQQQPPPPPPPAPPPGPG--PAPPQHPPRAEALPPEAADEGGP 71
Score = 37.0 bits (84), Expect = 0.019
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 10 LGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAP 56
L G + P ++ PP P + P PPP SPP +PA+P AP
Sbjct: 746 LVGPLALGSPRLVRRPPPGPAPAAASPGPPPPASPPG--APASPRAP 790
Score = 30.4 bits (67), Expect = 1.8
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 18 GPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHAR 70
GPA P P SPP +P +P + P P AP L PA P+ +R
Sbjct: 764 GPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAP-LAGPALPARRLSR 815
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 48.1 bits (113), Expect = 8e-06
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPE 60
PP P P PPP PPP P PP LP P +P+ LP+
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPK 2440
Score = 44.7 bits (104), Expect = 9e-05
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 18 GPASLQELPPSPR----------SPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
G S+ LP PR S PPP PPP P PP P P P P LP P P
Sbjct: 2379 GSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPPPLPPPTSP 2433
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 20 ASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEP 61
+S ++ P P PPP PPP P PP P P P P P+P
Sbjct: 2396 SSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPP--PTSPKP 2435
Score = 34.7 bits (78), Expect = 0.093
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
P + P P PPP P PPS + P+ P PA+PS
Sbjct: 474 PGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPS 520
Score = 34.7 bits (78), Expect = 0.093
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 27 PSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSE 66
P P+ P P P L PS + PEA L +PA P E
Sbjct: 698 PEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKE 737
Score = 33.5 bits (75), Expect = 0.21
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 25 LPPSPRSPSPPPSPPPLPSPPSLP-SPAAPEAPELPEPAQPSEAHARQLLLEEWGPLSGG 83
L P + PP PP PP+ P PA P A + SE + L + G
Sbjct: 342 LAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTP 401
Query: 84 LELP-------QRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQR 128
+ P Q++ L ++P ++ ++P P + +P P P Q+
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQ 453
Score = 33.5 bits (75), Expect = 0.21
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
P S + P P P P P PPS +A + + P PA+PS
Sbjct: 504 PGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 23 QELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP--EPAQPS 65
+ + PS SPS PP P P P P ++ P PAQPS
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPS 336
Score = 30.0 bits (66), Expect = 2.3
Identities = 16/49 (32%), Positives = 18/49 (36%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEA 67
P S P P P P+ PP P S P+ P P QP A
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA 517
Score = 29.6 bits (65), Expect = 3.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 18 GPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQ 63
GP S Q P +P +P PS PP P + AP AP P +
Sbjct: 953 GPHS-QSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVK 997
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 18 GPASLQELPPS-PRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
G S Q+ P+ P S P P+ P PP P PA P P+ P A+P
Sbjct: 457 GKTSAQQTGPTKPPSQLPGPAKP----PPQQPGPAKP-PPQQPGSAKP 499
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 22 LQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEE 76
++++PP+P P P P P S S + P+ + + Q + A +++LE+
Sbjct: 1122 IRKMPPAPSGPKASPMPVPTES-SSQKTAVPPQVKLVKKQEQEVKTEAEKVILEK 1175
Score = 29.3 bits (64), Expect = 3.9
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 18/76 (23%)
Query: 26 PPSPRSPSPPPS------PPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGP 79
PP P PS PS P PP P P P+ P + +P++ H P
Sbjct: 2484 PPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQ--KPTDIH----------P 2531
Query: 80 LSGGLELPQRLTWKLL 95
GL L +T L+
Sbjct: 2532 KPTGLSLTSSMTLNLV 2547
Score = 28.9 bits (63), Expect = 5.1
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 14 MEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPE----APELPEPAQPSEA 67
++ GP + P S + P P P LP PA P P P P QP A
Sbjct: 441 VQQPGPGKIPAQQAGPGKTSAQQTGPTKP-PSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Score = 28.9 bits (63), Expect = 5.1
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 19 PASLQELPPSPRSPSPPPSPP-PLPSPPSLPSPAAPEAPELPEPAQP 64
P + P P S PP P PP P PA P +P+ P +P
Sbjct: 484 PGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKP-SPQQPGSTKP 529
Score = 28.5 bits (62), Expect = 6.7
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 18/91 (19%)
Query: 15 EADGPASLQELPPSPRSPSPPPS-----------PPPLPSPPSLPSPAAPEAPELPEPAQ 63
E GP +L + P ++P+ P P PL P L SPA P Q
Sbjct: 384 EQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ 443
Query: 64 P-------SEAHARQLLLEEWGPLSGGLELP 87
P +A + ++ GP +LP
Sbjct: 444 PGPGKIPAQQAGPGKTSAQQTGPTKPPSQLP 474
Score = 28.5 bits (62), Expect = 6.7
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Query: 27 PSPRSPSPP-------PSPPPLPSPPSLP--SPAAPEAPELPEPAQPS 65
PS ++ PP P+PP PS PS +P A + P+ P+ +P+
Sbjct: 716 PSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPT 763
Score = 28.1 bits (61), Expect = 8.7
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 22 LQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGPLS 81
LQ+ PP P P PL + P + + PE + P P+
Sbjct: 211 LQQQPPKPIPKQQGPGRDPLQQDGT-PKSISSQQPEKIKSQPPGTGK----------PIQ 259
Query: 82 GGLELPQRLTWKLLLLR---RPLYR--NLLRS-------PNPEGINIYEPAPPTGPTQRP 129
G + PQ KL L R RP + +++R P+P I +P P P Q+P
Sbjct: 260 GPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQP 319
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 48.1 bits (113), Expect = 8e-06
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPE 60
PP P P PPP PPP P PP LP P +P+ LP+
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPK 2440
Score = 44.7 bits (104), Expect = 9e-05
Identities = 24/57 (42%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 18 GPASLQELPPSPR----------SPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
G S+ LP PR S PPP PPP P PP P P P P LP P P
Sbjct: 2379 GSPSVSSLPAKPRPFFRSSSLDISAQPPPPPPPPPPPP--PPPPPPPPPPLPPPTSP 2433
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Query: 20 ASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEP 61
+S ++ P P PPP PPP P PP P P P P P+P
Sbjct: 2396 SSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPP--PTSPKP 2435
Score = 34.7 bits (78), Expect = 0.093
Identities = 16/47 (34%), Positives = 20/47 (42%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
P + P P PPP P PPS + P+ P PA+PS
Sbjct: 474 PGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPS 520
Score = 34.7 bits (78), Expect = 0.093
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 27 PSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSE 66
P P+ P P P L PS + PEA L +PA P E
Sbjct: 698 PEPKKPPPLVKQPTLHGSPSAKAKQPPEADSLSKPAPPKE 737
Score = 33.5 bits (75), Expect = 0.21
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 25 LPPSPRSPSPPPSPPPLPSPPSLP-SPAAPEAPELPEPAQPSEAHARQLLLEEWGPLSGG 83
L P + PP PP PP+ P PA P A + SE + L + G
Sbjct: 342 LAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTP 401
Query: 84 LELP-------QRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQR 128
+ P Q++ L ++P ++ ++P P + +P P P Q+
Sbjct: 402 AQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQ 453
Score = 33.5 bits (75), Expect = 0.21
Identities = 16/47 (34%), Positives = 21/47 (44%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
P S + P P P P P PPS +A + + P PA+PS
Sbjct: 504 PGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 550
Score = 30.8 bits (68), Expect = 1.3
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Query: 23 QELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP--EPAQPS 65
+ + PS SPS PP P P P P ++ P PAQPS
Sbjct: 292 ESVKPSLPSPSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPS 336
Score = 30.0 bits (66), Expect = 2.3
Identities = 16/49 (32%), Positives = 18/49 (36%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEA 67
P S P P P P+ PP P S P+ P P QP A
Sbjct: 469 PPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPA 517
Score = 29.6 bits (65), Expect = 3.0
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 18 GPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQ 63
GP S Q P +P +P PS PP P + AP AP P +
Sbjct: 953 GPHS-QSGPGAPMKQAPAPSQPPTSQGPPKSTGQAPPAPAKSIPVK 997
Score = 29.3 bits (64), Expect = 3.9
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Query: 18 GPASLQELPPS-PRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
G S Q+ P+ P S P P+ P PP P PA P P+ P A+P
Sbjct: 457 GKTSAQQTGPTKPPSQLPGPAKP----PPQQPGPAKP-PPQQPGSAKP 499
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 22 LQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEE 76
++++PP+P P P P P S S + P+ + + Q + A +++LE+
Sbjct: 1122 IRKMPPAPSGPKASPMPVPTES-SSQKTAVPPQVKLVKKQEQEVKTEAEKVILEK 1175
Score = 29.3 bits (64), Expect = 3.9
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 18/76 (23%)
Query: 26 PPSPRSPSPPPS------PPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGP 79
PP P PS PS P PP P P P+ P + +P++ H P
Sbjct: 2484 PPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPVIPQLPTTTQ--KPTDIH----------P 2531
Query: 80 LSGGLELPQRLTWKLL 95
GL L +T L+
Sbjct: 2532 KPTGLSLTSSMTLNLV 2547
Score = 28.9 bits (63), Expect = 5.1
Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 5/58 (8%)
Query: 14 MEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPE----APELPEPAQPSEA 67
++ GP + P S + P P P LP PA P P P P QP A
Sbjct: 441 VQQPGPGKIPAQQAGPGKTSAQQTGPTKP-PSQLPGPAKPPPQQPGPAKPPPQQPGSA 497
Score = 28.9 bits (63), Expect = 5.1
Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 19 PASLQELPPSPRSPSPPPSPP-PLPSPPSLPSPAAPEAPELPEPAQP 64
P + P P S PP P PP P PA P +P+ P +P
Sbjct: 484 PGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKP-SPQQPGSTKP 529
Score = 28.5 bits (62), Expect = 6.7
Identities = 23/91 (25%), Positives = 33/91 (36%), Gaps = 18/91 (19%)
Query: 15 EADGPASLQELPPSPRSPSPPPS-----------PPPLPSPPSLPSPAAPEAPELPEPAQ 63
E GP +L + P ++P+ P P PL P L SPA P Q
Sbjct: 384 EQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQ 443
Query: 64 P-------SEAHARQLLLEEWGPLSGGLELP 87
P +A + ++ GP +LP
Sbjct: 444 PGPGKIPAQQAGPGKTSAQQTGPTKPPSQLP 474
Score = 28.5 bits (62), Expect = 6.7
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Query: 27 PSPRSPSPP-------PSPPPLPSPPSLP--SPAAPEAPELPEPAQPS 65
PS ++ PP P+PP PS PS +P A + P+ P+ +P+
Sbjct: 716 PSAKAKQPPEADSLSKPAPPKEPSVPSEQDKAPVADDKPKQPKMVKPT 763
Score = 28.1 bits (61), Expect = 8.7
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 22 LQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGPLS 81
LQ+ PP P P PL + P + + PE + P P+
Sbjct: 211 LQQQPPKPIPKQQGPGRDPLQQDGT-PKSISSQQPEKIKSQPPGTGK----------PIQ 259
Query: 82 GGLELPQRLTWKLLLLR---RPLYR--NLLRS-------PNPEGINIYEPAPPTGPTQRP 129
G + PQ KL L R RP + +++R P+P I +P P P Q+P
Sbjct: 260 GPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSKPPIQQPTPGKPPAQQP 319
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/42 (54%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 26 PPSPRSPSPPPS---PPPLPSPPSLPSPAAPEAPELPEPAQP 64
PP P P PPPS PPP P PP LP+ AP P P PA P
Sbjct: 683 PPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPP 724
Score = 45.8 bits (107), Expect = 4e-05
Identities = 21/40 (52%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAA-PEAPELPEPAQP 64
PPS P PPP PPPLP+ P+ P+P P AP P A P
Sbjct: 692 PPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPP 731
Score = 45.1 bits (105), Expect = 7e-05
Identities = 25/55 (45%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 18 GPASLQELPP------SPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP-EPAQPS 65
G SL PP P P PPP PPPLP P S P P P LP PA P+
Sbjct: 661 GLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPN 715
Score = 39.3 bits (90), Expect = 0.004
Identities = 25/55 (45%), Positives = 28/55 (50%), Gaps = 7/55 (12%)
Query: 17 DGPASLQE--LPPSPRS-PSPPPSPPPL----PSPPSLPSPAAPEAPELPEPAQP 64
+G AS Q+ LPP P S P PPP P L P+PP P A P P P P P
Sbjct: 635 EGMASNQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPPPPPPP 689
Score = 38.1 bits (87), Expect = 0.008
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 18 GPASLQELPPSPRSPSPPP--SPPPLPSPPSLPSPAAP 53
GP PP P SP+PP PPP P PP L P P
Sbjct: 697 GPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPP 734
Score = 31.6 bits (70), Expect = 0.79
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
PP P P P P+ P P+P P AP P L P P
Sbjct: 698 PPPPPPPPPLPNSPAPPNPGG--PPPAPPPPGLAPPPPP 734
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 47.8 bits (112), Expect = 1e-05
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 25 LPPSPRSPSPPPSPPPLPSPPSLP-SPAAPEAPELPE-PAQPSE 66
LPP P P PPP PPPLP PP LP +P + P+ PAQP +
Sbjct: 1522 LPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQ 1565
Score = 33.1 bits (74), Expect = 0.27
Identities = 17/52 (32%), Positives = 21/52 (40%)
Query: 20 ASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQ 71
A+++ + R P P PPP P PP P P P P P H Q
Sbjct: 1507 ATIEAVIHMAREAPPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQ 1558
Score = 32.0 bits (71), Expect = 0.60
Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Query: 14 MEADGPASLQELPPSPRSPSPPPSPPPLPSPPS------LPSPAAPEAPELPEPAQ 63
M + P PP P PPP PPP P P + P AP P P Q
Sbjct: 1515 MAREAPPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQ 1570
Score = 28.5 bits (62), Expect = 6.7
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 16/52 (30%)
Query: 19 PASLQELPPSPRSPSPP----------------PSPPPLPSPPSLPSPAAPE 54
P L PP P P PP P+ PP SPP P P E
Sbjct: 1527 PPPLPPPPPPPLPPPPPLPKTPRGGKRKHKPQAPAQPPQQSPPQQPLPQEEE 1578
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/42 (57%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 26 PPSPRSPSPPP--SPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
PP P P PPP SPPPLPSPP P PA E E P P P+
Sbjct: 424 PPPPLCPPPPPPVSPPPLPSPP--PPPAQEEQEESPPPVVPA 463
Score = 46.2 bits (108), Expect = 3e-05
Identities = 24/48 (50%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 19 PASLQELPPSPRSPSPP--PSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
P+ LPP SP PP P PPP SPP LPSP P A E E + P
Sbjct: 411 PSPPPPLPPPSTSPPPPLCPPPPPPVSPPPLPSPPPPPAQEEQEESPP 458
Score = 43.5 bits (101), Expect = 2e-04
Identities = 37/113 (32%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPE--LPEPAQPSEAHARQL----LLEEWGP 79
PP P+ P+P PSPP P+PPS P P PE L EP + R+L P
Sbjct: 571 PPVPQEPAPVPSPPRAPTPPSTPVP-LPEKRRSILREPTFRWTSLTRELPPPPPAPPPPP 629
Query: 80 LSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPA---PPTGPTQRP 129
P + + LLLR P + +P+ + IYE PP G + P
Sbjct: 630 APSPPPAPATSSRRPLLLRAPQF-----TPSEAHLKIYESVLTPPPLGAPEAP 677
Score = 43.1 bits (100), Expect = 3e-04
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 3 EVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPA 62
E +E A+ M +LPP P +P P PPPLP P + P P P P P P
Sbjct: 379 EEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPP--PLCPPPPPPV 436
Query: 63 QP 64
P
Sbjct: 437 SP 438
Score = 41.6 bits (96), Expect = 8e-04
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Query: 23 QELPPSPRSPSPPPSPPPLPSP-PSLPSPAAPEAPELPEPAQPSEAHAR 70
+ELPP P +P PPP+P P P+P S P AP+ PSEAH +
Sbjct: 616 RELPPPPPAPPPPPAPSPPPAPATSSRRPLLLRAPQF----TPSEAHLK 660
Score = 39.3 bits (90), Expect = 0.004
Identities = 35/126 (27%), Positives = 48/126 (38%), Gaps = 39/126 (30%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPS--------------------PPSLPSPAAPEAPEL 58
P +P PR+P+PP +P PLP PP P+P P AP
Sbjct: 574 PQEPAPVPSPPRAPTPPSTPVPLPEKRRSILREPTFRWTSLTRELPPPPPAPPPPPAPS- 632
Query: 59 PEPAQPSEAHARQLLLE--EWGPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINI 116
P PA P+ + R LLL ++ P L+ +Y ++L P
Sbjct: 633 PPPA-PATSSRRPLLLRAPQFTPSEAHLK---------------IYESVLTPPPLGAPEA 676
Query: 117 YEPAPP 122
EP PP
Sbjct: 677 PEPEPP 682
Score = 32.3 bits (72), Expect = 0.46
Identities = 31/99 (31%), Positives = 41/99 (41%), Gaps = 20/99 (20%)
Query: 35 PPSPPPLPSPPSL--PSPAAPEAPELPEPAQPSEAHARQLLLEEWGPLSGGLELPQRLTW 92
PP PP + P L P +P P+ P P PS A P S + LP++
Sbjct: 551 PPKPPKVEVSPVLRPPITTSPPVPQEPAPV-PSPPRAPT-------PPSTPVPLPEK--- 599
Query: 93 KLLLLRRPLYR--NLLRSPNPEGINIYEPAPPTGPTQRP 129
+ +LR P +R +L R P PAPP P P
Sbjct: 600 RRSILREPTFRWTSLTRELPPP-----PPAPPPPPAPSP 633
Score = 31.6 bits (70), Expect = 0.79
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 13 GMEADGPASLQELPPSPRSPSPPPSPPPLPSP-PSLPSPAAPEAPELPEPAQP 64
G E + A +E+ P+ PPPL P PS P P P + P P P
Sbjct: 378 GEEKEERAVAEEMMPAAEKEEAKLPPPPLTPPAPSPPPPLPPPSTSPPPPLCP 430
Score = 30.0 bits (66), Expect = 2.3
Identities = 24/75 (32%), Positives = 28/75 (37%), Gaps = 33/75 (44%)
Query: 25 LPPSPR----------SPSPPPSPPPL--------PSPP---------------SLPSPA 51
LPP P P+PPP PPPL SPP S P+P
Sbjct: 2234 LPPGPLLGVLPVVGVVRPAPPPPPPPLTLVLSSGPASPPRQAIRVKRVSTFSGRSPPAPP 2293
Query: 52 APEAPELPEPAQPSE 66
+AP L E + SE
Sbjct: 2294 PYKAPRLDEDGEASE 2308
Score = 29.6 bits (65), Expect = 3.0
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 27 PSPRSPSPPPS---PPPL--------PSPPSLPSPAAPEAPELPEP 61
PSP +P PPPS PPL P P S+ + P + EL P
Sbjct: 1916 PSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELAPP 1961
Score = 28.5 bits (62), Expect = 6.7
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 9/39 (23%)
Query: 27 PSPRSPS------PPPSPPPLPSPP---SLPSPAAPEAP 56
PSP SPS P P P+PP PSP AP P
Sbjct: 1886 PSPGSPSSLTHHIPTVGDPDFPAPPRRSRRPSPLAPRPP 1924
>gi|29789008 Huntingtin interacting protein C isoform 2 [Homo
sapiens]
Length = 858
Score = 47.8 bits (112), Expect = 1e-05
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 3 EVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPP-PLPSPPSL--PSPAAPEAPELP 59
EV G + P +LQ PP P+ P PPP PP P P P L P P E ++
Sbjct: 165 EVLVKQEAAGKQQQQLPQTLQPQPPQPQ-PDPPPVPPGPTPVPTGLLEPEPGGSEDCDVL 223
Query: 60 EPAQPSEAHARQLLLEEWGPLSGGLELPQR 89
E QP E Q L E GP S G PQ+
Sbjct: 224 EATQPLEQGFLQQL--EEGPSSSGQHQPQQ 251
Score = 30.0 bits (66), Expect = 2.3
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 25 LPP-SPRSPSPPPSPPPLPSPPSLPSPAAP----EAPELPEPAQP 64
LPP S R P+ PP PP + PP LP AP + P + P P
Sbjct: 15 LPPMSQRPPAIPPMPPGI-LPPMLPPMGAPPPLTQIPGMVPPMMP 58
Score = 28.1 bits (61), Expect = 8.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 19 PASLQELPPSPRSPSPPP--SPPPLPSPPSLPSPAAP 53
P ++ +PP P PP +PPPL P + P P
Sbjct: 22 PPAIPPMPPGILPPMLPPMGAPPPLTQIPGMVPPMMP 58
>gi|72534686 Huntingtin interacting protein C isoform 1 [Homo
sapiens]
Length = 871
Score = 47.8 bits (112), Expect = 1e-05
Identities = 35/90 (38%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Query: 3 EVREGHALGGGMEADGPASLQELPPSPRSPSPPPSPP-PLPSPPSL--PSPAAPEAPELP 59
EV G + P +LQ PP P+ P PPP PP P P P L P P E ++
Sbjct: 171 EVLVKQEAAGKQQQQLPQTLQPQPPQPQ-PDPPPVPPGPTPVPTGLLEPEPGGSEDCDVL 229
Query: 60 EPAQPSEAHARQLLLEEWGPLSGGLELPQR 89
E QP E Q L E GP S G PQ+
Sbjct: 230 EATQPLEQGFLQQL--EEGPSSSGQHQPQQ 257
Score = 30.0 bits (66), Expect = 2.3
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 25 LPP-SPRSPSPPPSPPPLPSPPSLPSPAAP----EAPELPEPAQP 64
LPP S R P+ PP PP + PP LP AP + P + P P
Sbjct: 21 LPPMSQRPPAIPPMPPGI-LPPMLPPMGAPPPLTQIPGMVPPMMP 64
Score = 28.1 bits (61), Expect = 8.7
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 19 PASLQELPPSPRSPSPPP--SPPPLPSPPSLPSPAAP 53
P ++ +PP P PP +PPPL P + P P
Sbjct: 28 PPAIPPMPPGILPPMLPPMGAPPPLTQIPGMVPPMMP 64
>gi|21389577 hypothetical protein LOC146705 [Homo sapiens]
Length = 525
Score = 47.8 bits (112), Expect = 1e-05
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 11/72 (15%)
Query: 22 LQELPPSPRSPSPPPSPP--PLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGP 79
L P S RSP+P P P+P+PP P+A +P P PSEA AR W P
Sbjct: 394 LSSTPVSSRSPAPSSGMPSSPVPTPP-------PDASPIPAPGDPSEAEARLAESRRWRP 446
Query: 80 --LSGGLELPQR 89
+ GG + P+R
Sbjct: 447 ERIPGGTDSPKR 458
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 47.4 bits (111), Expect = 1e-05
Identities = 22/42 (52%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 27 PSPRSPSPPPSP-PPLPSPPSL--PSPAAPEAPELPEPAQPS 65
P P+ P PPP P P LPSPP L P+P++P P LP P P+
Sbjct: 1467 PQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPA 1508
Score = 47.4 bits (111), Expect = 1e-05
Identities = 24/52 (46%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Query: 26 PPSPRSPSPPP---SPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLL 74
PP P P PPP SPPP P P + P A PE P P P P R L L
Sbjct: 1497 PPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRPLHL 1548
Score = 46.2 bits (108), Expect = 3e-05
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 26 PPSPRSPSPPPSPPPLPS---PPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEWGPLSG 82
PP P PSPPP P PS PP LP P P P P P P+ A E P
Sbjct: 1477 PPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPE 1536
Query: 83 GLELP 87
ELP
Sbjct: 1537 DPELP 1541
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/48 (45%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPEL--PEPAQP 64
P L+E PP P+P P P P P PP P PA P P L P P+ P
Sbjct: 1450 PPLLEEKPPPTPPPAPTPQPQPPPPPPP-PQPALPSPPPLVAPTPSSP 1496
Score = 43.1 bits (100), Expect = 3e-04
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 6 EGHALGGGMEADGPASLQELPPSPRSPSPPP-----SPPPLPSPPSLPSPAAPEAPELPE 60
+G L GP L LP + + +P P PPP P P P P P P P+
Sbjct: 1420 DGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQ 1479
Query: 61 PAQPS 65
PA PS
Sbjct: 1480 PALPS 1484
Score = 40.0 bits (92), Expect = 0.002
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 21/66 (31%)
Query: 17 DGP-----ASLQELPPSPRSPS---------------PPPSPPPLPSP-PSLPSPAAPEA 55
DGP A++ PP P PS PPP+PPP P+P P P P P
Sbjct: 1420 DGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQ 1479
Query: 56 PELPEP 61
P LP P
Sbjct: 1480 PALPSP 1485
Score = 37.0 bits (84), Expect = 0.019
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
Query: 27 PSPRSPSPPPSP----------PPLPSPPS-LPSPAAPEAPELPEPAQ 63
P P++P+PPP P PP +P + +P P APE P L P +
Sbjct: 1692 PPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVE 1739
Score = 35.4 bits (80), Expect = 0.054
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 14/72 (19%)
Query: 25 LPPSPRSPSPPPSPPPLPSPPSLP------------SPAAPEAPELPEPAQPSEAHARQL 72
L P+ R +P P PPP P PP +P PAAP PE + ++L
Sbjct: 824 LEPATRDGAPQPPPPPPPPPPPMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQEL 883
Query: 73 L--LEEWGPLSG 82
L LE P G
Sbjct: 884 LGALEPLPPAPG 895
Score = 33.9 bits (76), Expect = 0.16
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLP 48
P L + P +P PPP PPP P+P S P
Sbjct: 1026 PLGLIQSGPHQAAPPPPPPPPPPPAPASEP 1055
Score = 33.1 bits (74), Expect = 0.27
Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 10/79 (12%)
Query: 11 GGGMEADGPASLQELPPSPRSPSPPPSPPPLPSP-----PSLPSPAAPEAPEL-----PE 60
GG + G A E P++ + PP PP P P S A PE P L
Sbjct: 956 GGAADDYGKAGPPEDEGDPKAGAGPPPGPPAYDPYGPYCPGRASGAGPETPGLGLDPNKP 1015
Query: 61 PAQPSEAHARQLLLEEWGP 79
P PS +A L L + GP
Sbjct: 1016 PELPSTVNAEPLGLIQSGP 1034
Score = 32.3 bits (72), Expect = 0.46
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 8/48 (16%)
Query: 26 PPSPRSPSPP--------PSPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
P +P P P PPPLP PS S PE P L E P+
Sbjct: 1413 PKDTSTPDGPPLAPAAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPT 1460
Score = 31.6 bits (70), Expect = 0.79
Identities = 29/82 (35%), Positives = 32/82 (39%), Gaps = 16/82 (19%)
Query: 14 MEADGPASLQELPPSPR-------SPSPPPSPPPLPSPPSLPSPA----APEAPELPEPA 62
+EA GP LPP P S +P PSP L PA AP+ P P P
Sbjct: 783 LEAGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPP 842
Query: 63 QPS-----EAHARQLLLEEWGP 79
P EAH R LE P
Sbjct: 843 PPPMPLQLEAHLRSHGLEPAAP 864
Score = 31.6 bits (70), Expect = 0.79
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 4/40 (10%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPS----PAAPEAPELPEP 61
PP ++ PP PP PPS+P+ P P P +P P
Sbjct: 1296 PPLYQAGLTPPLSPPKSVPPSVPARGLQPQPPATPAVPHP 1335
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/60 (33%), Positives = 22/60 (36%), Gaps = 16/60 (26%)
Query: 7 GHALGGGMEADG----PASLQELPPS------------PRSPSPPPSPPPLPSPPSLPSP 50
G A G G E G P ELP + P +PPP PPP P P P
Sbjct: 996 GRASGAGPETPGLGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPASEP 1055
Score = 29.6 bits (65), Expect = 3.0
Identities = 24/76 (31%), Positives = 29/76 (38%), Gaps = 15/76 (19%)
Query: 11 GGGMEAD---GPASLQELPPSPRSPSPPPSPPP-----LPSPPSLPSPAAPEAPEL---- 58
GGG+ GPA P P P PPP P L S + + A +P+L
Sbjct: 210 GGGVLGPAGLGPAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFS 269
Query: 59 ---PEPAQPSEAHARQ 71
P P P A RQ
Sbjct: 270 GAAPGPPPPERALPRQ 285
Score = 28.9 bits (63), Expect = 5.1
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 7/41 (17%)
Query: 7 GHALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSL 47
G GGG Q+L +P PP PP P PP L
Sbjct: 458 GQGFGGGQA-------QDLSKAPSYSGGPPQPPSGPPPPGL 491
>gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 564
Score = 46.6 bits (109), Expect = 2e-05
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Query: 26 PPSPRSPSPPPS--PPPLPSPPSL--PSPAAPEAPELPEPAQP 64
PP+P P PPPS PP+PSPPS P P AP P P++P
Sbjct: 516 PPAPHCPPPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRP 558
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPE-LPEPAQ 63
PP+P PPP+P P PPS P+P P P LP P Q
Sbjct: 507 PPAPIYTPPPPAPHCPPPPPSAPTPPIPSPPSTLPPPPQ 545
Score = 39.3 bits (90), Expect = 0.004
Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 26 PPSPRSPSPP-PSPPP-LPSPPSLPSPAAPEAPELPEP 61
PP P +P+PP PSPP LP PP P P P P P
Sbjct: 523 PPPPSAPTPPIPSPPSTLPPPPQAPPPNRAPPPSRPPP 560
Score = 37.4 bits (85), Expect = 0.014
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 8 HALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAA--PEAPELPEP 61
+ L P P P +P PP PP P+PP +PSP + P P+ P P
Sbjct: 495 YPLNNAYHTSSPPPAPIYTPPPPAPHCPPPPPSAPTPP-IPSPPSTLPPPPQAPPP 549
Score = 31.6 bits (70), Expect = 0.79
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Query: 33 SPPPSPPPLPSPPSLP-SPAAPEAPELPEPAQPS 65
SPPP+P P PP+ P P AP P P+ PS
Sbjct: 505 SPPPAPIYTPPPPAPHCPPPPPSAPTPPIPSPPS 538
Score = 31.2 bits (69), Expect = 1.0
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPP 45
P+ LPP P++P P +PPP PP
Sbjct: 534 PSPPSTLPPPPQAPPPNRAPPPSRPPP 560
Score = 29.3 bits (64), Expect = 3.9
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 27 PSPRS--PSPPPSPPPLPSPPSLPSPAAP 53
PSP S P PP +PPP +PP P P
Sbjct: 534 PSPPSTLPPPPQAPPPNRAPPPSRPPPRP 562
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 23 QELPPSPRSPSPPP------SPPPLPSPPSLPSPAAPEAPELPEP 61
Q+ PP P+ P PPP PPP P PPS+P AAP P P
Sbjct: 755 QQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPAMKSSPPP 799
Score = 41.2 bits (95), Expect = 0.001
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 22 LQELP-PSPRSPSPPPSPPPLPSPPSLPS--PAAPEAPELPEPAQPS 65
+Q+ P P P+ P PPP PP P PP P P P +P+ A P+
Sbjct: 746 MQQAPAPVPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQAAPA 792
Score = 39.7 bits (91), Expect = 0.003
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 10/113 (8%)
Query: 19 PASLQELPPSPRSPSPPPSP-PPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEW 77
PA LP P PS + PP P+ P SPA + P LP QP A Q+LLE+
Sbjct: 860 PALHNALPQQPSRPSNRAAALPPKPARPPAVSPALTQTPLLP---QPPMAQPPQVLLEDE 916
Query: 78 GPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIY-EPAPPTGPTQRP 129
P P + ++ L + L + +P + + +P PP P P
Sbjct: 917 EP-----PAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHP 964
Score = 35.4 bits (80), Expect = 0.054
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAP 56
P LQ PP P P PPP+P P P P AA P
Sbjct: 244 PQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQP 281
Score = 34.7 bits (78), Expect = 0.093
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 27 PSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEA 67
P+P P PP PP P PP P P P P+ P +A
Sbjct: 750 PAP-VPQQPPPPPQQPPPPPPPQQQQQPPPPPPPPSMPQQA 789
Score = 33.5 bits (75), Expect = 0.21
Identities = 14/40 (35%), Positives = 16/40 (40%)
Query: 25 LPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
+PP P PP P P P P P P P + QP
Sbjct: 242 VPPQPLQTPPPVPPQPQPPPAPAPQPVQSHPPIIAATPQP 281
Score = 33.5 bits (75), Expect = 0.21
Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 8/54 (14%)
Query: 25 LPPSPR-------SPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQ 71
LPP P PPP PPP P PP P P +P Q S H +Q
Sbjct: 958 LPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFS-THIQQ 1010
Score = 32.3 bits (72), Expect = 0.46
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 24/69 (34%)
Query: 22 LQELPPSPRSPSPPPSP------------------------PPLPSPPSLPSPAAPEAPE 57
LQ+ PP P P P P P PP P P P + P
Sbjct: 970 LQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPPPGQQPP 1029
Query: 58 LPEPAQPSE 66
P+PA+P +
Sbjct: 1030 PPQPAKPQQ 1038
Score = 31.6 bits (70), Expect = 0.79
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 30 RSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQ 71
++P+P P PP P P P P P+ + P P P + +Q
Sbjct: 748 QAPAPVPQQPP-PPPQQPPPPPPPQQQQQPPPPPPPPSMPQQ 788
Score = 30.4 bits (67), Expect = 1.8
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 13/62 (20%)
Query: 26 PPSPRSPS------PPPSPPPLPSP------PSLPSPAAPEAPELPEPAQPSEAHARQLL 73
PP+P PS PPP PP P P P P P P+ P P Q + R +
Sbjct: 940 PPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQ-PPPQQQHQPPPRPVH 998
Query: 74 LE 75
L+
Sbjct: 999 LQ 1000
Score = 29.6 bits (65), Expect = 3.0
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 24/72 (33%)
Query: 19 PASLQELPPSPRSPSPP-PSPPP-----------------------LPSPPSLPSPAAPE 54
P+ Q+L P P PP P PPP P PP P P
Sbjct: 964 PSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQQPPPPQGQQPPHPP 1023
Query: 55 APELPEPAQPSE 66
+ P P QP++
Sbjct: 1024 PGQQPPPPQPAK 1035
Score = 28.9 bits (63), Expect = 5.1
Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 27 PSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPE--PAQPSEAHARQLLL 74
P P P P PP +PP L A P L P QPS R L
Sbjct: 831 PQPELPPHLPQPPEHSTPPHLNQHAVVSPPALHNALPQQPSRPSNRAAAL 880
Score = 28.1 bits (61), Expect = 8.7
Identities = 20/76 (26%), Positives = 29/76 (38%), Gaps = 27/76 (35%)
Query: 19 PASLQELPPSPRSPSPPPSPPPL-------------------------PSPPSLPSPAAP 53
P + Q P P++ +P P+PPP+ P P P P P
Sbjct: 197 PNTTQASTP-PQTQTPQPNPPPVQATPHPFPAVTPDLIVQTPVMTVVPPQPLQTPPPVPP 255
Query: 54 EAPELPEPA-QPSEAH 68
+ P PA QP ++H
Sbjct: 256 QPQPPPAPAPQPVQSH 271
Score = 28.1 bits (61), Expect = 8.7
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP--EPAQP 64
P Q+ PP P PPPS P +P SP A ++P EP P
Sbjct: 769 PPQQQQQPPPP---PPPPSMPQQAAPAMKSSPPPFIATQVPVLEPQLP 813
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 46.2 bits (108), Expect = 3e-05
Identities = 21/38 (55%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 22 LQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP 59
LQ PP+P P PPP PPP P PP P P+AP +LP
Sbjct: 1990 LQAPPPTP--PPPPPPPPPPPPPPPPPPPSAPPQVQLP 2025
Score = 40.8 bits (94), Expect = 0.001
Identities = 16/28 (57%), Positives = 17/28 (60%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAP 53
P SP +P PPP PPPLP P PS P
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPPQPSSMGP 1979
Score = 40.0 bits (92), Expect = 0.002
Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 18/56 (32%)
Query: 19 PASLQELPPSPRS------------------PSPPPSPPPLPSPPSLPSPAAPEAP 56
P L PP P S P+PPP PPP P PP P P P AP
Sbjct: 1964 PPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAP 2019
Score = 40.0 bits (92), Expect = 0.002
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 18 GPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQ 63
GP + +P PP PPP P PP P P P P P Q
Sbjct: 1978 GPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQ 2023
Score = 39.7 bits (91), Expect = 0.003
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
Query: 25 LPPSPRSPS-------------PPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSE 66
LPP+P PS P +PPP P PP P P P P P P+ P +
Sbjct: 1967 LPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQ 2021
Score = 39.3 bits (90), Expect = 0.004
Identities = 16/34 (47%), Positives = 19/34 (55%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP 59
PP P P PPP PPP P P + P P + +LP
Sbjct: 1998 PPPPPPPPPPPPPPPPPPPSAPPQVQLPVSLDLP 2031
Score = 39.3 bits (90), Expect = 0.004
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 26 PPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELP 59
PP P P PPP PPP +PP + P + + P P
Sbjct: 2001 PPPPPPPPPPPPPPPPSAPPQVQLPVSLDLPLFP 2034
Score = 38.9 bits (89), Expect = 0.005
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 16/62 (25%)
Query: 19 PASLQELPPSPRSPSPPPSPP----------------PLPSPPSLPSPAAPEAPELPEPA 62
P+S + PP P P PP+PP PL +PP P P P P P P
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPP 2011
Query: 63 QP 64
P
Sbjct: 2012 PP 2013
Score = 38.5 bits (88), Expect = 0.006
Identities = 17/35 (48%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 26 PPSPRSP-SPPPSPPPLPSPPSLPSPAAPEAPELP 59
P SP SP +PPP PPP P PP+ P P++ ++P
Sbjct: 1949 PISPSSPETPPPPPPPPPLPPAPPQPSSMGPVKIP 1983
Score = 35.4 bits (80), Expect = 0.054
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 10/37 (27%)
Query: 29 PRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPS 65
P SPS P +PPP P PP LP P P QPS
Sbjct: 1949 PISPSSPETPPPPPPPPPLP----------PAPPQPS 1975
Score = 34.7 bits (78), Expect = 0.093
Identities = 14/26 (53%), Positives = 15/26 (57%)
Query: 21 SLQELPPSPRSPSPPPSPPPLPSPPS 46
SL P P +PPP PPP P PPS
Sbjct: 3104 SLSSAPTKPLLQTPPPPPPPPPPPPS 3129
Score = 29.6 bits (65), Expect = 3.0
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 20 ASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQP 64
AS PP + P P P P P + P P A + P P+ P
Sbjct: 2387 ASTSSDPPQASTAQPQPQPQPPKQPQLIGRP--PSASQTPVPSSP 2429
Score = 29.3 bits (64), Expect = 3.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Query: 17 DGPASLQELPPSPRSPSPPPS-----PPPLPSPPSLPSPAAPEAPELPEPAQP 64
+GP+SL P + + +PP + P S P+L +AP P L P P
Sbjct: 3068 NGPSSLPGFPQNSNTLTPPGAGMLGFPTSATSSPALSLSSAPTKPLLQTPPPP 3120
Score = 28.9 bits (63), Expect = 5.1
Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 7/48 (14%)
Query: 27 PSPRSPSPPPSPP---PLPSPPSLPS----PAAPEAPELPEPAQPSEA 67
P P SP P P P S PS PS PA P A +P Q S A
Sbjct: 2352 PEPEKTSPKPEYPAEKPKQSDPSPPSQGTKPALPLASTSSDPPQASTA 2399
>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
Length = 227
Score = 45.8 bits (107), Expect = 4e-05
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 9 ALGGGMEADGPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAH 68
A G G + +G A Q PP PR P P S PP P+P P+P ++P LP+ A S
Sbjct: 8 ACGPGAQ-EGTAE-QRSPPPPRDPMPS-SQPPPPTPTLTPTPTPGQSPPLPDAAGASAGA 64
Query: 69 ARQLLLEEWGPLSGGL 84
A L+ W + G+
Sbjct: 65 AEDQELQRWRQGASGI 80
>gi|104876423 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 4
[Homo sapiens]
Length = 456
Score = 45.4 bits (106), Expect = 5e-05
Identities = 31/84 (36%), Positives = 38/84 (45%), Gaps = 14/84 (16%)
Query: 10 LGGGMEADGPASLQELPPSPRSPSPPPSPPP-LPSPPSLPSPAAPEAP---------ELP 59
LGG P +LQE P + P P P PP LP+P L +P+ P AP E P
Sbjct: 53 LGGSGSLQFPLALQESPGAAAEPPPSPPPPSLLPTPVRLGAPSQPPAPPPLDNASHGEPP 112
Query: 60 EPAQPSEAHARQLLLEEWGPLSGG 83
EP + A + WG SGG
Sbjct: 113 EPPEQPAAPG----TDGWGLPSGG 132
Score = 32.7 bits (73), Expect = 0.35
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Query: 30 RSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQ 63
R P+PPP PPP PP L +P P A PA+
Sbjct: 3 RWPAPPPPPPP---PPPLAAPPPPGASAKGPPAR 33
Score = 32.7 bits (73), Expect = 0.35
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Query: 29 PRSPSPPPSPPPLPSPPSLPSPAAPEAP 56
P P PPP PPPL +PP P A+ + P
Sbjct: 5 PAPPPPPPPPPPLAAPP--PPGASAKGP 30
Score = 29.3 bits (64), Expect = 3.9
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 27 PSPRSPSPPPSPPPLPSPPSLPSPAAP 53
P+P P PPP P P PP + P
Sbjct: 5 PAPPPPPPPPPPLAAPPPPGASAKGPP 31
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 45.1 bits (105), Expect = 7e-05
Identities = 35/108 (32%), Positives = 40/108 (37%), Gaps = 17/108 (15%)
Query: 18 GPASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLLLEEW 77
GP LQELP P PPP+PPP PP+L P AP P P H L
Sbjct: 430 GPPGLQELP-----PLPPPTPPPTLQPPALQPTPLPVAP----PLTPGLGHKESALAPTA 480
Query: 78 GPLSGGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGP 125
P LP L P + P+P + PAP P
Sbjct: 481 AP-----ALPPALAADQAPAPSPAPAPTVAEPSPP---VSAPAPAAAP 520
Score = 33.1 bits (74), Expect = 0.27
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 7/50 (14%)
Query: 10 LGGGMEADGPASLQELPP---SPRSPSPPPSPPPL---PSPP-SLPSPAA 52
LG A P + LPP + ++P+P P+P P PSPP S P+PAA
Sbjct: 469 LGHKESALAPTAAPALPPALAADQAPAPSPAPAPTVAEPSPPVSAPAPAA 518
Score = 30.0 bits (66), Expect = 2.3
Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 14/123 (11%)
Query: 19 PASLQELPPSPRSPSPPPSPPPLPSPPSLPSPAAPEAPELPEPAQPSEAHARQLL---LE 75
PA PP+ P+P P P PP L E P LP P P L L
Sbjct: 406 PAPALLAPPTFIFPAPTNGEPMRPGPPGL-----QELPPLPPPTPPPTLQPPALQPTPLP 460
Query: 76 EWGPLSGGLELPQRLTWKLLLLRRP--LYRNLLRSPNP-EGINIYEPAPPT---GPTQRP 129
PL+ GL + P L + +P+P + EP+PP P P
Sbjct: 461 VAPPLTPGLGHKESALAPTAAPALPPALAADQAPAPSPAPAPTVAEPSPPVSAPAPAAAP 520
Query: 130 LET 132
++T
Sbjct: 521 IKT 523
Score = 28.9 bits (63), Expect = 5.1
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 19 PASLQEL--PPSPRSPSPPPSPPPLPS--PPSLPSPAAPEAPELPEPAQPSE 66
P SL+ L PP PR S + P PS PP L + P P LP QP++
Sbjct: 136 PPSLRPLKPPPPPRQLSVKDTVPRAPSQFPPPLETWKPP--PPLPSERQPAD 185
>gi|194272180 plexin B1 [Homo sapiens]
Length = 2135
Score = 44.7 bits (104), Expect = 9e-05
Identities = 34/108 (31%), Positives = 41/108 (37%), Gaps = 29/108 (26%)
Query: 31 SPSPPPSPPPLPSPPSLPSPAAPEAPE-LP-EPAQPSEAHARQL-------LLEEWGPLS 81
SP PP P PSPP+ P A AP+ LP EP PS A A + LL WGP +
Sbjct: 681 SPDPPARGGPSPSPPTAPKALATPAPDTLPVEPGAPSTATASDISPGASPSLLSPWGPWA 740
Query: 82 GGLELPQRLTWKLLLLRRPLYRNLLRSPNPEGINIYEPAPPTGPTQRP 129
G + SP G ++E P P P
Sbjct: 741 GS--------------------GSISSPGSTGSPLHEEPSPPSPQNGP 768
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,674,263
Number of Sequences: 37866
Number of extensions: 1070064
Number of successful extensions: 45518
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 954
Number of HSP's that attempted gapping in prelim test: 14019
Number of HSP's gapped (non-prelim): 17122
length of query: 275
length of database: 18,247,518
effective HSP length: 101
effective length of query: 174
effective length of database: 14,423,052
effective search space: 2509611048
effective search space used: 2509611048
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.