Guide to the Human Genome
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Name: FBXO17 Sequence: fasta or formatted (278aa) NCBI GI: 18643385
Description:

F-box protein FBG4 isoform 2

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [287aa] F-box protein FBG4 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.2         20           1
 C cysteine            4.3         12           1
 D aspartate           4.3         12           1
 E glutamate           6.5         18           2
 F phenylalanine       3.6         10           1
 G glycine             7.2         20           2
 H histidine           1.8          5           1
 I isoleucine          2.5          7           1
 K lysine              2.2          6           1
 L leucine            10.4         29           2
 M methionine          0.7          2           1
 N asparagine          2.5          7           1
 P proline             5.8         16           2
 Q glutamine           4.3         12           1
 R arginine           10.1         28           3
 S serine              7.2         20           2
 T threonine           2.9          8           1
 V valine             10.4         29           2
 W tryptophan          3.6         10           2
 Y tyrosine            2.5          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box protein FBG4 isoform 2 
FBXO17                1.000   F-box protein FBG4 isoform 1 
FBXO27                0.557   F-box protein 27 
FBXO2                 0.280   F-box only protein 2 
FBXO6                 0.267   F-box only protein 6 
FBXO44                0.247   F-box protein 44 isoform 1 
FBXO44                0.247   F-box protein 44 isoform 1 
NCCRP1                0.090   non-specific cytotoxic cell receptor protein 1 homol...
FBXO44                0.075   F-box protein 44 isoform 2 
FBXO44                0.075   F-box protein 44 isoform 2 
FBXL7                 0.027   F-box and leucine-rich repeat protein 7 
FBXW9                 0.023   F-box and WD-40 domain protein 9 
FBXO16                0.022   F-box only protein 16 
FBXO31                0.020   F-box protein 31 
FBXO24                0.018   F-box only protein 24 isoform 1 
FBXO24                0.018   F-box only protein 24 isoform 2 
FBXO41                0.018   F-box protein 41 
SLC26A11              0.013   solute carrier family 26, member 11 
FBXO18                0.013   F-box only protein, helicase, 18 isoform 1 
FBXO18                0.013   F-box only protein, helicase, 18 isoform 2 
FBXL12                0.013   F-box and leucine-rich repeat protein 12 
FBXW7                 0.011   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.011   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.011   F-box and WD repeat domain containing 7 isoform 2 [H...
FBXL6                 0.011   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL6                 0.011   F-box and leucine-rich repeat protein 6 isoform 1 [H...
LOC100292038          0.009   PREDICTED: hypothetical protein XP_002344902 
LOC100287180          0.009   PREDICTED: hypothetical protein 
LOC100287180          0.009   PREDICTED: hypothetical protein XP_002343415 
FAM47A                0.009   hypothetical protein LOC158724 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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