Guide to the Human Genome
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Name: ATE1 Sequence: fasta or formatted (518aa) NCBI GI: 50345877
Description:

arginyltransferase 1 isoform 1

Referenced in:

tRNA Enzymes

Other entries for this name:
alt prot [518aa] arginyltransferase 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         23           2
 C cysteine            3.1         16           2
 D aspartate           5.6         29           2
 E glutamate           6.9         36           2
 F phenylalanine       3.9         20           1
 G glycine             5.6         29           2
 H histidine           2.1         11           1
 I isoleucine          3.1         16           2
 K lysine              8.7         45           2
 L leucine             8.3         43           2
 M methionine          2.5         13           1
 N asparagine          2.7         14           1
 P proline             7.9         41           2
 Q glutamine           6.0         31           2
 R arginine            4.6         24           2
 S serine              9.7         50           2
 T threonine           2.9         15           1
 V valine              5.6         29           2
 W tryptophan          1.0          5           1
 Y tyrosine            5.4         28           3
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arginyltransferase 1 isoform 1 
ATE1                  0.950   arginyltransferase 1 isoform 2 
MAP1B                 0.011   microtubule-associated protein 1B 
BEST1                 0.010   bestrophin 1 isoform 2 
BEST1                 0.010   bestrophin 1 isoform 1 
MLLT1                 0.010   myeloid/lymphoid or mixed-lineage leukemia (trithora...
ADD2                  0.010   adducin 2 isoform c 
LOC731605             0.010   PREDICTED: similar to BCL2-associated transcription...
LOC731605             0.010   PREDICTED: similar to BCL2-associated transcription...
C14orf174             0.010   hypothetical protein LOC161394 
AP3D1                 0.009   adaptor-related protein complex 3, delta 1 subunit ...
BCLAF1                0.008   BCL2-associated transcription factor 1 isoform 3 [H...
BCLAF1                0.008   BCL2-associated transcription factor 1 isoform 2 [H...
BCLAF1                0.008   BCL2-associated transcription factor 1 isoform 1 [Hom...
SRPK1                 0.008   SFRS protein kinase 1 
POTEH                 0.008   ANKRD26-like family C, member 3 
KIAA1009              0.008   KIAA1009 protein 
MYCBP2                0.007   MYC binding protein 2 
P704P                 0.007   prostate-specific P704P 
BPTF                  0.007   bromodomain PHD finger transcription factor isoform ...
BPTF                  0.007   bromodomain PHD finger transcription factor isoform ...
CELSR2                0.007   cadherin EGF LAG seven-pass G-type receptor 2 
SDCCAG1               0.007   serologically defined colon cancer antigen 1 
MICALCL               0.007   MICAL C-terminal like 
MDM1                  0.007   mouse Mdm1 nuclear protein homolog isoform 1 
POTEG                 0.006   POTE ankyrin domain family, member G 
TBC1D10A              0.006   TBC1 domain family, member 10A 
IKBKG                 0.006   inhibitor of kappa light polypeptide gene enhancer ...
IKBKG                 0.006   inhibitor of kappa light polypeptide gene enhancer in...
IKBKG                 0.006   inhibitor of kappa light polypeptide gene enhancer ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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