Guide to the Human Genome
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Name: ITK Sequence: fasta or formatted (620aa) NCBI GI: 15718680
Description:

IL2-inducible T-cell kinase

Referenced in:

T cells
Non-Receptor Tyrosine Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         31           2
 C cysteine            2.6         16           2
 D aspartate           4.5         28           2
 E glutamate           8.4         52           2
 F phenylalanine       4.4         27           2
 G glycine             5.2         32           3
 H histidine           2.6         16           1
 I isoleucine          4.2         26           1
 K lysine              6.8         42           2
 L leucine             9.2         57           3
 M methionine          1.9         12           2
 N asparagine          4.5         28           3
 P proline             4.8         30           2
 Q glutamine           3.4         21           2
 R arginine            6.3         39           2
 S serine              7.3         45           2
 T threonine           4.5         28           1
 V valine              7.4         46           2
 W tryptophan          2.1         13           2
 Y tyrosine            5.0         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   IL2-inducible T-cell kinase 
TEC                   0.582   tec protein tyrosine kinase 
BTK                   0.495   Bruton agammaglobulinemia tyrosine kinase 
BMX                   0.429   BMX non-receptor tyrosine kinase 
BMX                   0.429   BMX non-receptor tyrosine kinase 
TXK                   0.426   TXK tyrosine kinase 
LYN                   0.232   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog is...
FYN                   0.232   protein-tyrosine kinase fyn isoform a 
LCK                   0.231   lymphocyte-specific protein tyrosine kinase precurs...
LCK                   0.231   lymphocyte-specific protein tyrosine kinase precurs...
YES1                  0.230   viral oncogene yes-1 homolog 1 
FYN                   0.226   protein-tyrosine kinase fyn isoform b 
ABL1                  0.226   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.226   c-abl oncogene 1, receptor tyrosine kinase isoform b...
LYN                   0.226   Yamaguchi sarcoma viral (v-yes-1) oncogene homolog ...
HCK                   0.226   hemopoietic cell kinase isoform p61HCK 
SRC                   0.222   proto-oncogene tyrosine-protein kinase SRC 
SRC                   0.222   proto-oncogene tyrosine-protein kinase SRC 
BLK                   0.222   B lymphoid tyrosine kinase 
ABL2                  0.222   arg tyrosine kinase isoform c 
ABL2                  0.222   arg tyrosine kinase isoform b 
ABL2                  0.222   arg tyrosine kinase isoform e 
ABL2                  0.222   arg tyrosine kinase isoform d 
ABL2                  0.222   arg tyrosine kinase isoform a 
FGR                   0.222   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.222   proto-oncogene tyrosine-protein kinase FGR 
FGR                   0.222   proto-oncogene tyrosine-protein kinase FGR 
FRK                   0.215   fyn-related kinase 
SRMS                  0.197   src-related kinase lacking C-terminal regulatory tyr...
FYN                   0.195   protein-tyrosine kinase fyn isoform c 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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