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Search of human proteins with 4759154
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4759154 synaptosomal-associated protein 29 [Homo sapiens]
(258 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4759154 synaptosomal-associated protein 29 [Homo sapiens] 513 e-146
gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B [... 58 9e-09
gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A [... 56 4e-08
gi|18765729 synaptosomal-associated protein 23 isoform SNAP23A [... 53 3e-07
gi|224465202 synaptosomal-associated protein, 47kDa [Homo sapiens] 40 0.003
gi|4759188 syntaxin 8 [Homo sapiens] 38 0.008
gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens] 38 0.010
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 36 0.038
gi|18765731 synaptosomal-associated protein 23 isoform SNAP23B [... 36 0.038
gi|115511012 coiled-coil domain containing 136 [Homo sapiens] 36 0.038
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 34 0.11
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 34 0.11
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 33 0.19
gi|5454166 vesicle transport through interaction with t-SNAREs 1... 33 0.19
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens] 33 0.25
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 33 0.25
gi|156104874 envoplakin [Homo sapiens] 33 0.32
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 32 0.42
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 32 0.42
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 32 0.42
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 32 0.42
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 32 0.42
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 32 0.42
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 32 0.42
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 32 0.42
gi|40538794 coiled-coil domain containing 21 [Homo sapiens] 32 0.42
gi|238908495 similar to pleckstrin homology domain protein (5V32... 32 0.55
gi|71061468 centromere protein E [Homo sapiens] 32 0.55
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 32 0.55
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 32 0.55
>gi|4759154 synaptosomal-associated protein 29 [Homo sapiens]
Length = 258
Score = 513 bits (1320), Expect = e-146
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MSAYPKSYNPFDDDGEDEGARPAPWRDARDLPDGPDAPADRQQYLRQEVLRRAEATAAST 60
MSAYPKSYNPFDDDGEDEGARPAPWRDARDLPDGPDAPADRQQYLRQEVLRRAEATAAST
Sbjct: 1 MSAYPKSYNPFDDDGEDEGARPAPWRDARDLPDGPDAPADRQQYLRQEVLRRAEATAAST 60
Query: 61 SRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLV 120
SRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLV
Sbjct: 61 SRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLV 120
Query: 121 NYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGA 180
NYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGA
Sbjct: 121 NYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGA 180
Query: 181 GSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTK 240
GSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTK
Sbjct: 181 GSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTK 240
Query: 241 VDKLDVNIKSTERKVRQL 258
VDKLDVNIKSTERKVRQL
Sbjct: 241 VDKLDVNIKSTERKVRQL 258
>gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B
[Homo sapiens]
Length = 206
Score = 57.8 bits (138), Expect = 9e-09
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 47 QEVLRRAEATA----ASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDL 102
+E+ RRA+ A ST R L L+ ES+ G+ + L Q LER E+ +D++++D+
Sbjct: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERIEEGMDQINKDM 71
Query: 103 KISQKHINSIKSVFGGLV---NYFKSKPVETPP---EQNGTLTSQPNNRLKEAISTSKEQ 156
K ++K++ + G V N KS Q+G + SQP + E +EQ
Sbjct: 72 KEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDE-----REQ 126
Query: 157 EAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRL 216
A + G ++ DA ++D NL+++S +G L
Sbjct: 127 MA-----------------ISGGFIRRVTNDAR---------ENEMDENLEQVSGIIGNL 160
Query: 217 KDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
+ +AL M EI+ Q+ +DR+ K D I ++ ++
Sbjct: 161 RHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
>gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A
[Homo sapiens]
Length = 206
Score = 55.8 bits (133), Expect = 4e-08
Identities = 55/222 (24%), Positives = 98/222 (44%), Gaps = 41/222 (18%)
Query: 47 QEVLRRAEATA----ASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDL 102
+E+ RRA+ A ST R L L+ ES+ G+ + L Q L+R E+ ++ ++QD+
Sbjct: 12 EEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRVEEGMNHINQDM 71
Query: 103 KISQKHINSIKSVFGGLV---NYFKSKPVETPP---EQNGTLTSQPNNRLKEAISTSKEQ 156
K ++K++ + G + N KS Q+G + SQP + E +EQ
Sbjct: 72 KEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPARVVDE-----REQ 126
Query: 157 EAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRL 216
A + G ++ DA ++D NL+++S +G L
Sbjct: 127 MA-----------------ISGGFIRRVTNDAR---------ENEMDENLEQVSGIIGNL 160
Query: 217 KDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
+ +AL M EI+ Q+ +DR+ K D I ++ ++
Sbjct: 161 RHMALDMGNEIDTQNRQIDRIMEKADSNKTRIDEANQRATKM 202
>gi|18765729 synaptosomal-associated protein 23 isoform SNAP23A
[Homo sapiens]
Length = 211
Score = 52.8 bits (125), Expect = 3e-07
Identities = 50/201 (24%), Positives = 86/201 (42%), Gaps = 20/201 (9%)
Query: 47 QEVLRRA----EATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDL 102
+E+ +RA + + ST R L L ES+ G+ + L Q+ L R E+ +D++++D+
Sbjct: 7 EEIQQRAHQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDM 66
Query: 103 KISQKHINSIKSVFGGLV-NYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQ 161
+ ++K + + G V ++K E+ T N +S Q
Sbjct: 67 RETEKTLTELNKCCGLCVCPCNRTKNFESGKAYKTTWGDGGENSPCNVVSKQPGPVTNGQ 126
Query: 162 ASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIAL 221
P GA S Y K A +++ NL ++ LG LKD+AL
Sbjct: 127 LQQPTT-----------GAASG----GYIKRITNDAREDEMEENLTQVGSILGNLKDMAL 171
Query: 222 GMQTEIEEQDDILDRLTTKVD 242
+ EI+ Q+ + R+T K D
Sbjct: 172 NIGNEIDAQNPQIKRITDKAD 192
Score = 29.3 bits (64), Expect = 3.6
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 199 HQKIDSNLDELSMGLG---RLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
HQ D +L+ LG +D + T ++EQ + L+R+ +D+++ +++ TE+ +
Sbjct: 14 HQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDMRETEKTL 73
Query: 256 RQL 258
+L
Sbjct: 74 TEL 76
>gi|224465202 synaptosomal-associated protein, 47kDa [Homo sapiens]
Length = 464
Score = 39.7 bits (91), Expect = 0.003
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 203 DSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
+++ EL+ L R+K +AL ++E+E QD+ LD + VD+ + I R++++L
Sbjct: 408 EADTQELTQILRRMKGLALEAESELERQDEALDGVAAAVDRATLTIDKHNRRMKRL 463
Score = 28.5 bits (62), Expect = 6.1
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 42 QQYLRQEVLRRAEATA-ASTSRS-----LALMYESEKVGVASSEELARQRGVLERTEKMV 95
+ + R+ +L + A A AS R+ LM S+K ++ L Q L+ + +
Sbjct: 140 EHFWRELLLSQPGAVADASVPRTRGEELTGLMAGSQKRLEDTARVLHHQGQQLDSVMRGL 199
Query: 96 DKMDQDLKISQKHINSIKS-VFGGLVNYFKSKPVETPPEQNGTLTS 140
DKM+ DL+++ + + ++S + + P ET P ++ ++TS
Sbjct: 200 DKMESDLEVADRLLTELESPAWWPFSSKLWKTPPETKPREDVSMTS 245
>gi|4759188 syntaxin 8 [Homo sapiens]
Length = 236
Score = 38.1 bits (87), Expect = 0.008
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 195 LRAYHQKI----DSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKS 250
+R QKI D+ LD LS + R K + + E++EQ++I+D L V+ D +++
Sbjct: 140 IRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRN 199
Query: 251 TERKVRQL 258
R+V +
Sbjct: 200 ETRRVNMV 207
>gi|30581135 structural maintenance of chromosomes 1A [Homo sapiens]
Length = 1233
Score = 37.7 bits (86), Expect = 0.010
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 11/224 (4%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
ADR Q L+ EV+R A L +Y +E ++ELA + +E+ +K +DK+
Sbjct: 206 ADRYQRLKDEVVR------AQVQLQLFKLYHNEVEIEKLNKELASKNKEIEKDKKRMDKV 259
Query: 99 DQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEA 158
+ +LK +K + + + K K E ++ + ++ N K + ++
Sbjct: 260 EDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAAKKSL 319
Query: 159 KYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSM-GLGRLK 217
+ H RK D + + + + + Q D L+E + RLK
Sbjct: 320 QNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHRLK 379
Query: 218 DIALGMQTEIEEQDDILDR-LTTKVDKLDVNIK---STERKVRQ 257
+ A + ++ + +R D+LD+ + TE K++Q
Sbjct: 380 EEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAKIKQ 423
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 35.8 bits (81), Expect = 0.038
Identities = 46/230 (20%), Positives = 94/230 (40%), Gaps = 30/230 (13%)
Query: 29 RDLPDGPDAPADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVL 88
R L + R Q L +E+ R A +RS A + ++ + + E+L + R
Sbjct: 1355 RKLLSEKEVHTKRIQQLTEEIGR----LKAEIARSNASLTNNQNLIQSLKEDLNKVRTEK 1410
Query: 89 ERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKE 148
E +K +D D++ K I +K + +K++ E +Q+ +
Sbjct: 1411 ETIQKDLDAKIIDIQEKVKTITQVKKIG----RRYKTQYEELKAQQD------------K 1454
Query: 149 AISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDE 208
+ TS + +Q H +++++ + A K+ L + + + L E
Sbjct: 1455 VMETSAQSSGDHQEQHVSVQEMQELKET--------LNQAETKSKSLESQVENLQKTLSE 1506
Query: 209 LSMGLGRLKDIALGMQTEIEE-QDDILDRLTTKVDKLDVNIKSTERKVRQ 257
L++ + +Q+E+ + D+ DR TT+ ++L I E K R+
Sbjct: 1507 KETEARNLQEQTVQLQSELSRLRQDLQDR-TTQEEQLRQQITEKEEKTRK 1555
>gi|18765731 synaptosomal-associated protein 23 isoform SNAP23B
[Homo sapiens]
Length = 158
Score = 35.8 bits (81), Expect = 0.038
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 197 AYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVD 242
A +++ NL ++ LG LKD+AL + EI+ Q+ + R+T K D
Sbjct: 94 AREDEMEENLTQVGSILGNLKDMALNIGNEIDAQNPQIKRITDKAD 139
Score = 29.3 bits (64), Expect = 3.6
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 199 HQKIDSNLDELSMGLG---RLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
HQ D +L+ LG +D + T ++EQ + L+R+ +D+++ +++ TE+ +
Sbjct: 14 HQITDESLESTRRILGLAIESQDAGIKTITMLDEQKEQLNRIEEGLDQINKDMRETEKTL 73
Query: 256 RQL 258
+L
Sbjct: 74 TEL 76
>gi|115511012 coiled-coil domain containing 136 [Homo sapiens]
Length = 1154
Score = 35.8 bits (81), Expect = 0.038
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 25/138 (18%)
Query: 40 DRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGV-------LERTE 92
+RQQ L++E L+ EA ++A ES + + +L + + LER +
Sbjct: 441 ERQQQLQEE-LQCHEAELQHLRDTVASFKESNEKDTETHAQLQEMKQLYQASKDELERQK 499
Query: 93 KMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAIST 152
M D+++QDL + Q + +K+ S P+ PE G N+ +S
Sbjct: 500 HMYDQLEQDLLLCQLELKELKA----------SHPI---PEDKGKCA----NKCDTLLSR 542
Query: 153 SKEQEAKYQASHPNLRKL 170
E + KY+AS + +L
Sbjct: 543 LTELQEKYKASQKEMGQL 560
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 34.3 bits (77), Expect = 0.11
Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 41/195 (21%)
Query: 85 RGVLERTEKMVD---KMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQ 141
+G L+++ ++++ K+ D+K ++ H+N +K+ +E +NG L
Sbjct: 1968 KGCLQKSFRILNEAKKLANDVKENEDHLNGLKT------------RIENADARNGDLLRT 2015
Query: 142 PNNRLKEAISTSKEQEAKYQASHPNLRKLDDT---------------DPVPRG----AGS 182
N+ L + + + AK QA R+ +DT D + + A S
Sbjct: 2016 LNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADS 2075
Query: 183 AMSTDAYPKNPHLR-------AYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILD 235
T+A K+P A + ++ D L L +K++ ++ I E ++++
Sbjct: 2076 VAKTNAVVKDPSKNKIIADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELIN 2135
Query: 236 RLTTKVDKLDVNIKS 250
+ + + + V++ S
Sbjct: 2136 QARKQANSIKVSVSS 2150
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 34.3 bits (77), Expect = 0.11
Identities = 37/195 (18%), Positives = 82/195 (42%), Gaps = 41/195 (21%)
Query: 85 RGVLERTEKMVD---KMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQ 141
+G L+++ ++++ K+ D+K ++ H+N +K+ +E +NG L
Sbjct: 1968 KGCLQKSFRILNEAKKLANDVKENEDHLNGLKT------------RIENADARNGDLLRT 2015
Query: 142 PNNRLKEAISTSKEQEAKYQASHPNLRKLDDT---------------DPVPRG----AGS 182
N+ L + + + AK QA R+ +DT D + + A S
Sbjct: 2016 LNDTLGKLSAIPNDTAAKLQAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADS 2075
Query: 183 AMSTDAYPKNPHLR-------AYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILD 235
T+A K+P A + ++ D L L +K++ ++ I E ++++
Sbjct: 2076 VAKTNAVVKDPSKNKIIADADATVKNLEQEADRLIDKLKPIKELEDNLKKNISEIKELIN 2135
Query: 236 RLTTKVDKLDVNIKS 250
+ + + + V++ S
Sbjct: 2136 QARKQANSIKVSVSS 2150
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 33.5 bits (75), Expect = 0.19
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 21/183 (11%)
Query: 82 ARQRGVLERTE--KMVDKMDQDLKISQKHINSIKSV--FGGLVNYFKSKPVETPPEQNGT 137
A+ RGVL R E K++++ D L + Q +I + V + + YFK KP+ E+
Sbjct: 790 AQSRGVLARMEYKKLLERRDS-LLVIQWNIRAFMGVKNWPWMKLYFKIKPLLKSAEREKE 848
Query: 138 LTSQPNN--RLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHL 195
+ S RLKEA+ S+ + + + +L + + + A DA
Sbjct: 849 MASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADA------- 901
Query: 196 RAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKV 255
+ D+L +L+ M +E+++++ LT K KL+ +R +
Sbjct: 902 -------EERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDI 954
Query: 256 RQL 258
L
Sbjct: 955 DDL 957
Score = 30.0 bits (66), Expect = 2.1
Identities = 34/187 (18%), Positives = 74/187 (39%), Gaps = 28/187 (14%)
Query: 80 ELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLT 139
EL R V+E+TE+ +Q+L + + + + S L+N K +
Sbjct: 1684 ELEELRAVVEQTERSRKLAEQELIETSERVQLLHSQNTSLINQKKKMDAD---------L 1734
Query: 140 SQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYH 199
SQ ++EA+ + E K + + + D + T A HL
Sbjct: 1735 SQLQTEVEEAVQECRNAEEKAK------KAITDAAMMAEELKKEQDTSA-----HLERMK 1783
Query: 200 QKIDSNLDELSMGLGRLKDIAL--------GMQTEIEEQDDILDRLTTKVDKLDVNIKST 251
+ ++ + +L L + IAL ++ + E ++ L+ + + ++ +
Sbjct: 1784 KNMEQTIKDLQHRLDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKS 1843
Query: 252 ERKVRQL 258
ER++++L
Sbjct: 1844 ERRIKEL 1850
>gi|5454166 vesicle transport through interaction with t-SNAREs 1B
[Homo sapiens]
Length = 232
Score = 33.5 bits (75), Expect = 0.19
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 40 DRQQYLRQEVLRRAEATAASTS---RSLALMYESEKVGVASSEELARQRGVLERTEKMVD 96
+R Q R +L+ E+ +T RS + E++++G EEL QR LERT+ +
Sbjct: 123 NRLQSQRAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLV 182
Query: 97 KMDQDLKISQKHINSI 112
++L S+K + S+
Sbjct: 183 NTSENLSKSRKILRSM 198
>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
Length = 3664
Score = 33.1 bits (74), Expect = 0.25
Identities = 22/109 (20%), Positives = 49/109 (44%), Gaps = 10/109 (9%)
Query: 41 RQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQ 100
+ + + +E L+R+ + + L L E+EK+ +S+ A ++ +
Sbjct: 1843 KSERIDREKLKRSNSPRGEAQKLLELKMEAEKITRTASKNSAAD----------LEHPEP 1892
Query: 101 DLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEA 149
L +S+ +++SV+ + ++ PV+ P EQ + L+EA
Sbjct: 1893 SLPLSRTRRRNVRSVYATMGDHENRSPVKEPVEQPRVTRKRLERELQEA 1941
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 33.1 bits (74), Expect = 0.25
Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 51/193 (26%)
Query: 69 ESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPV 128
E EK + +E+ Q + E EK ++K+D + Q + S+ S ++
Sbjct: 650 EQEKETLLKDKEIIFQAHIEEMNEKTLEKLD----VKQTELESLSSELSEVL-------- 697
Query: 129 ETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDA 188
+ ++L+E +S K+Q K + K+D+
Sbjct: 698 ------------KARHKLEEELSVLKDQTDKMKQELE--AKMDEQ--------------- 728
Query: 189 YPKNPHLRAYHQKIDSNLDELSMGLGR----LKDIALGMQTEIEEQDDILDRLTTKVDKL 244
KN H Q++DS + E + + R LKD ++ ++E+D L V+ L
Sbjct: 729 --KNHH----QQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHVENL 782
Query: 245 DVNIKSTERKVRQ 257
+ +IK +E +++Q
Sbjct: 783 EADIKRSEGELQQ 795
>gi|156104874 envoplakin [Homo sapiens]
Length = 2033
Score = 32.7 bits (73), Expect = 0.32
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 11/71 (15%)
Query: 191 KNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQ---TEIEEQDDILDRLTTKVDKLDVN 247
K+P LR H ++ +LDE +GR + + L +Q +EEQ+ +L + KL V
Sbjct: 1380 KDPKLREEHSRLSGSLDE---EVGRRRQLELEVQQLRAGVEEQEGLLSFQEDRSKKLAV- 1435
Query: 248 IKSTERKVRQL 258
ER++RQL
Sbjct: 1436 ----ERELRQL 1442
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1243 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1302
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1303 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1348
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1394 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1453
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1454 IRVVRLQLEATERQRGG 1470
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1969 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2028
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2029 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2087
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2088 RAAEEAEEARVQA 2100
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1247 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1306
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1307 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1352
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1398 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1457
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1458 IRVVRLQLEATERQRGG 1474
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1973 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2032
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2033 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2091
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2092 RAAEEAEEARVQA 2104
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1243 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1302
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1303 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1348
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1394 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1453
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1454 IRVVRLQLEATERQRGG 1470
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1969 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2028
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2029 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2087
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2088 RAAEEAEEARVQA 2100
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1211 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1270
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1271 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1316
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1362 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1421
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1422 IRVVRLQLEATERQRGG 1438
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1937 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 1996
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 1997 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2055
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2056 RAAEEAEEARVQA 2068
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1380 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1439
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1440 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1485
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1531 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1590
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1591 IRVVRLQLEATERQRGG 1607
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 2106 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2165
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2166 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2224
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2225 RAAEEAEEARVQA 2237
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1221 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1280
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1281 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1326
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1372 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1431
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1432 IRVVRLQLEATERQRGG 1448
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1947 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2006
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2007 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2065
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2066 RAAEEAEEARVQA 2078
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1229 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1288
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1289 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1334
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1380 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1439
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1440 IRVVRLQLEATERQRGG 1456
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1955 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2014
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2015 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2073
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2074 RAAEEAEEARVQA 2086
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 32.3 bits (72), Expect = 0.42
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 24/106 (22%)
Query: 76 ASSEELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYFK-----SKPVET 130
A E+L +++ +LE E+ +K+++ + ++++IN+IK LV Y + P +
Sbjct: 1270 AVREQLRQEQALLEEIERHGEKVEECQRFAKQYINAIKDYELQLVTYKAQLEPVASPAKK 1329
Query: 131 PPEQNG-------------------TLTSQPNNRLKEAISTSKEQE 157
P Q+G TLTSQ + E + +E+E
Sbjct: 1330 PKVQSGSESVIQEYVDLRTHYSELTTLTSQYIKFISETLRRMEEEE 1375
Score = 32.0 bits (71), Expect = 0.55
Identities = 15/77 (19%), Positives = 42/77 (54%)
Query: 42 QQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQD 101
QQ +++EV+RR EA + + ++ E +++ +S E+ + E E+ +++++
Sbjct: 1421 QQRMQEEVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEE 1480
Query: 102 LKISQKHINSIKSVFGG 118
+++ + + + + GG
Sbjct: 1481 IRVVRLQLEATERQRGG 1497
Score = 30.4 bits (67), Expect = 1.6
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 10/133 (7%)
Query: 39 ADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKM 98
A RQ+ L E RR +SLA E+ + A+ EE+ R + +E ++ ++
Sbjct: 1996 AARQRQLAAEEERRRREAEERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERA 2055
Query: 99 DQD--------LKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAI 150
+Q+ + +QK + + + V K + ++ +Q ++ Q + A
Sbjct: 2056 EQESARQLQLAQEAAQKRLQAEEKAHAFAVQQ-KEQELQQTLQQEQSVLDQLRGEAEAAR 2114
Query: 151 STSKE-QEAKYQA 162
++E +EA+ QA
Sbjct: 2115 RAAEEAEEARVQA 2127
>gi|40538794 coiled-coil domain containing 21 [Homo sapiens]
Length = 762
Score = 32.3 bits (72), Expect = 0.42
Identities = 51/244 (20%), Positives = 101/244 (41%), Gaps = 16/244 (6%)
Query: 21 RPAPWRDARDLPDGPDAPADRQQYLRQEVLRRAEATAASTSRSLALMYESEKVGVASSE- 79
RPAP+ D L Q+ R+ RA+ + + S + +K+ + E
Sbjct: 372 RPAPFGDVCLLR--------LQELQRENTFLRAQFAQKTEALSREKIDLEKKLSASEVEV 423
Query: 80 ELARQ--RGVLERTEKMVDKMDQDLKISQKHINSIKSVF--GGLVNYFKSKPVETPPEQN 135
+L R+ + L++ + V K ++ +K KHIN++K N K + +ET
Sbjct: 424 QLIRESLKVALQKHSEEVKKQEERVKGRDKHINNLKKKCQKESEQNREKQQRIETLERYL 483
Query: 136 GTL-TSQPNNRLKEAISTSKEQEAKYQASHPNLRK-LDDTDPVPRGAGSAMSTDAYPKNP 193
L T + + + + + S+ + + Q L L++T + R + + +
Sbjct: 484 ADLPTLEDHQKQSQQLKDSELKSTELQEKVTELESLLEETQAICREKEIQLESLRQREAE 543
Query: 194 HLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTER 253
A H D E + G G ++ Q + I+++ K+D+L ++S E+
Sbjct: 544 FSSAGHSLQDKQSVEETSGEGPEVEME-SWQKRYDSLQKIVEKQQQKMDQLRSQVQSLEQ 602
Query: 254 KVRQ 257
+V Q
Sbjct: 603 EVAQ 606
>gi|238908495 similar to pleckstrin homology domain protein (5V327)
[Homo sapiens]
Length = 506
Score = 32.0 bits (71), Expect = 0.55
Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 18/196 (9%)
Query: 66 LMYESEKVGVASS--EELARQRGVLERTEKMVDKMDQDLKISQKHINSIKSVFGGLVNYF 123
LM E+E++ + EEL R VLE ++ +++ Q+L++ Q+ I + +
Sbjct: 170 LMEETEELCLQREQREELERLNQVLEAEKQQFEEVVQELRMEQEQIKRELELTARCL--- 226
Query: 124 KSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKYQASHPNLRKLDDTDPVPRGAGSA 183
K VE ++ LT L+E K+ + + +L+ L + P +G
Sbjct: 227 --KGVEQEKKELRHLTESLQQTLEELSIEKKKTLEMLEENENHLQTLANQSEQPPPSGGL 284
Query: 184 MSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLK---DIALGMQTEIEEQDDILDRLTTK 240
S +LR +K+ L+E + R+K + + ++ E E L
Sbjct: 285 HS--------NLRQIEEKMQQLLEEKLLAEKRMKENEERSRALEEEREFYSSQSQALQNS 336
Query: 241 VDKLDVNIKSTERKVR 256
+ +L + ER+++
Sbjct: 337 LQELTAEKQQAERELK 352
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 32.0 bits (71), Expect = 0.55
Identities = 33/172 (19%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 95 VDKMDQDLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSK 154
++K+ ++ I + + F + ++ E E++ T++ + LK ++
Sbjct: 2282 IEKLKNGIQKENDRICQVNNFFNNRIIAIMNESTEFE-ERSATISKEWEQDLKSLKEKNE 2340
Query: 155 EQEAKYQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSN-LDELSMGL 213
+ YQ +L +P T KNPH+ + ++ + + EL L
Sbjct: 2341 KLFKNYQTLKTSLASGAQVNP----------TTQDNKNPHVTSRATQLTTEKIRELENSL 2390
Query: 214 GRLKDIALG-------MQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
K+ A+ MQ E+E +DI+ +L KV + + ++ T+ ++ L
Sbjct: 2391 HEAKESAMHKESKIIKMQKELEVTNDIIAKLQAKVHESNKCLEKTKETIQVL 2442
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 32.0 bits (71), Expect = 0.55
Identities = 46/226 (20%), Positives = 87/226 (38%), Gaps = 32/226 (14%)
Query: 45 LRQEVLRRAEATAASTSRSLALMYES----EKVGVASSEELARQRGVLERTEKMVDKMDQ 100
L Q L+ +A R A ++E E+ + EL R LE+ E+ +Q
Sbjct: 1694 LMQAQLKEEQAGRDEEQRLAAELHEQAQALERRASLLAAELEELRAALEQGERSRRLAEQ 1753
Query: 101 DLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEAKY 160
+L + + +N + S GL+N K + +Q + ++EA +E E K
Sbjct: 1754 ELLEATERLNLLHSQNTGLLNQKKKLEAD---------LAQLSGEVEEAAQERREAEEKA 1804
Query: 161 QASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIA 220
+ + + D + T A HL + ++ + EL L + A
Sbjct: 1805 K------KAITDAAMMAEELKKEQDTSA-----HLERMKKTLEQTVRELQARLEEAEQAA 1853
Query: 221 L--------GMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQL 258
L ++ ++ E + LD K + ++ ER+V++L
Sbjct: 1854 LRGGKKQVQKLEAKVRELEAELDAEQKKHAEALKGVRKHERRVKEL 1899
Score = 28.5 bits (62), Expect = 6.1
Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 20/225 (8%)
Query: 48 EVLRRAEATAASTSRSLALMYESEKVGVASSEELARQ-------RGVLERTEKMVDKMDQ 100
E L RA+A+A R+ K+ V EEL RQ RG L+ + ++ +
Sbjct: 1285 ETLTRAKASAEKLCRTYEDQLSEAKIKV---EELQRQLADASTQRGRLQTESGELSRLLE 1341
Query: 101 DLKISQKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTS-QPNNRLKEAISTSKEQEAK 159
+ + ++ K++ + + + E ++ + Q + + E+EA+
Sbjct: 1342 EKECLISQLSRGKALAAQSLEELRRQLEEESKAKSALAHAVQALRHDCDLLREQHEEEAE 1401
Query: 160 YQASHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGL------ 213
QA L L + S DA + L +K+ L E G+
Sbjct: 1402 AQAELQRL--LSKANAEVAQWRSKYEADAIQRTEELEEAKKKLALRLQEAEEGVEAANAK 1459
Query: 214 -GRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQ 257
L+ L +QTE E+ L+R T+ LD + ER + +
Sbjct: 1460 CSSLEKAKLRLQTESEDVTLELERATSAAAALDKKQRHLERALEE 1504
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 32.0 bits (71), Expect = 0.55
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 180 AGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTT 239
AG + PK L+ K + ++ LS L + +QTEI EQ+D++ L T
Sbjct: 1382 AGLEHLRELQPKLDELQKLISKKEEDVSYLSGQLSEKEAALTKIQTEIIEQEDLIKALHT 1441
Query: 240 KVDKLDVNIKSTERKVRQL 258
+L++ K + +++QL
Sbjct: 1442 ---QLEMQAKEHDERIKQL 1457
Score = 29.3 bits (64), Expect = 3.6
Identities = 40/215 (18%), Positives = 87/215 (40%), Gaps = 29/215 (13%)
Query: 46 RQEVLRRAEATAASTSRSLALMYESEKVGVASSEELARQRGVLERTEKMVDKMDQDLKIS 105
+Q++ R+ +A S +L K + EEL+ RG +ER K + ++ +
Sbjct: 1478 KQQIQRKLQAALISRKEAL-------KENKSLQEELSLARGTIERLTKSLADVESQVSAQ 1530
Query: 106 QKHINSIKSVFGGLVNYFKSKPVETPPEQNGTLTSQPNNRLKEAISTSKEQEA---KYQA 162
K +++ L E+ L ++ + L E S S E+ +
Sbjct: 1531 NKEKDTVLGRLALL------------QEERDKLITEMDRSLLENQSLSSSCESLKLALEG 1578
Query: 163 SHPNLRKLDDTDPVPRGAGSAMSTDAYPKNPHLRAYHQKIDSNLDELSMGLGRLKDIALG 222
+ KL + + A ST+ K+ L+ ++ + + + +S R++ +
Sbjct: 1579 LTEDKEKLVKEIESLKSSKIAESTEWQEKHKELQKEYEILLQSYENVSNEAERIQHVVEA 1638
Query: 223 MQTEIEEQDDILDRLTTKVDKLDVNIKSTERKVRQ 257
++ E +E L K+ + N K TE+++++
Sbjct: 1639 VRQEKQE-------LYGKLRSTEANKKETEKQLQE 1666
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.128 0.353
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,702,348
Number of Sequences: 37866
Number of extensions: 432620
Number of successful extensions: 1842
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 1708
Number of HSP's gapped (non-prelim): 192
length of query: 258
length of database: 18,247,518
effective HSP length: 100
effective length of query: 158
effective length of database: 14,460,918
effective search space: 2284825044
effective search space used: 2284825044
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.