Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4758844
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens]
(1332 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens] 2654 0.0
gi|24430149 nucleoporin 155kDa isoform 1 [Homo sapiens] 2654 0.0
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 41 0.007
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 39 0.043
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 38 0.074
gi|169164209 PREDICTED: hypothetical protein [Homo sapiens] 37 0.17
gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo ... 37 0.17
gi|40807452 peroxisome proliferator-activated receptor gamma, co... 36 0.22
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 36 0.22
gi|169215453 PREDICTED: hypothetical protein [Homo sapiens] 36 0.28
gi|169215350 PREDICTED: hypothetical protein [Homo sapiens] 35 0.37
gi|209862789 microtubule associated monoxygenase, calponin and L... 35 0.37
gi|4503493 early growth response 1 [Homo sapiens] 35 0.48
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.48
gi|4502443 dystonin isoform 1e precursor [Homo sapiens] 35 0.48
gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo sa... 35 0.48
gi|27734799 REST corepressor 2 [Homo sapiens] 35 0.48
gi|28269672 serologically defined colon cancer antigen 8 [Homo s... 35 0.48
gi|110611218 ribosome binding protein 1 [Homo sapiens] 35 0.63
gi|110611220 ribosome binding protein 1 [Homo sapiens] 35 0.63
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 35 0.63
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 35 0.63
gi|19924099 synapsin I isoform Ia [Homo sapiens] 35 0.63
gi|19924097 synapsin I isoform Ib [Homo sapiens] 35 0.63
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.63
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 34 0.82
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 34 0.82
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 34 0.82
gi|163965366 nascent polypeptide-associated complex alpha subuni... 34 0.82
gi|87298937 centrosomal protein 110kDa [Homo sapiens] 34 0.82
>gi|4758844 nucleoporin 155kDa isoform 2 [Homo sapiens]
Length = 1332
Score = 2654 bits (6879), Expect = 0.0
Identities = 1332/1332 (100%), Positives = 1332/1332 (100%)
Query: 1 MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI 60
MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI
Sbjct: 1 MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI 60
Query: 61 DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS 120
DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS
Sbjct: 61 DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS 120
Query: 121 YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA 180
YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA
Sbjct: 121 YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA 180
Query: 181 YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV 240
YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV
Sbjct: 181 YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV 240
Query: 241 IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL 300
IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL
Sbjct: 241 IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL 300
Query: 301 AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL 360
AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL
Sbjct: 301 AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL 360
Query: 361 MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD 420
MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD
Sbjct: 361 MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD 420
Query: 421 HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF 480
HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF
Sbjct: 421 HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF 480
Query: 481 KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG 540
KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG
Sbjct: 481 KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG 540
Query: 541 SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY 600
SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY
Sbjct: 541 SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY 600
Query: 601 SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE 660
SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE
Sbjct: 601 SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE 660
Query: 661 FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ 720
FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ
Sbjct: 661 FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ 720
Query: 721 AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA 780
AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA
Sbjct: 721 AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA 780
Query: 781 SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE 840
SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE
Sbjct: 781 SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE 840
Query: 841 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI 900
SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI
Sbjct: 841 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI 900
Query: 901 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH 960
VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH
Sbjct: 901 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH 960
Query: 961 FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD 1020
FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD
Sbjct: 961 FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD 1020
Query: 1021 LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE 1080
LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE
Sbjct: 1021 LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE 1080
Query: 1081 FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA 1140
FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA
Sbjct: 1081 FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA 1140
Query: 1141 ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP 1200
ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP
Sbjct: 1141 ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP 1200
Query: 1201 RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK 1260
RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK
Sbjct: 1201 RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK 1260
Query: 1261 PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN 1320
PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN
Sbjct: 1261 PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN 1320
Query: 1321 FKSLQAKLERLH 1332
FKSLQAKLERLH
Sbjct: 1321 FKSLQAKLERLH 1332
>gi|24430149 nucleoporin 155kDa isoform 1 [Homo sapiens]
Length = 1391
Score = 2654 bits (6879), Expect = 0.0
Identities = 1332/1332 (100%), Positives = 1332/1332 (100%)
Query: 1 MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI 60
MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI
Sbjct: 60 MSDMDYPLQGPGLLSVPNLPEISSIRRVPLPPELVEQFGHMQCNCMMGVFPPISRAWLTI 119
Query: 61 DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS 120
DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS
Sbjct: 120 DSDIFMWNYEDGGDLAYFDGLSETILAVGLVKPKAGIFQPHVRHLLVLATPVDIVILGLS 179
Query: 121 YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA 180
YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA
Sbjct: 180 YANLQTGSGVLNDSLSGGMQLLPDPLYSLPTDNTYLLTITSTDNGRIFLAGKDGCLYEVA 239
Query: 181 YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV 240
YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV
Sbjct: 240 YQAEAGWFSQRCRKINHSKSSLSFLVPSLLQFTFSEDDPILQIAIDNSRNILYTRSEKGV 299
Query: 241 IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL 300
IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL
Sbjct: 300 IQVYDLGQDGQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLL 359
Query: 301 AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL 360
AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL
Sbjct: 360 AVTHAGVRLYFSTCPFRQPLARPNTLTLVHVRLPPGFSASSTVEKPSKVHRALYSKGILL 419
Query: 361 MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD 420
MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD
Sbjct: 420 MAASENEDNDILWCVNHDTFPFQKPMMETQMTAGVDGHSWALSAIDELKVDKIITPLNKD 479
Query: 421 HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF 480
HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF
Sbjct: 480 HIPITDSPVVVQQHMLPPKKFVLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFF 539
Query: 481 KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG 540
KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG
Sbjct: 540 KLHQEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILG 599
Query: 541 SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY 600
SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY
Sbjct: 600 SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCVTGPEIVY 659
Query: 601 SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE 660
SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE
Sbjct: 660 SGKHNGICIYFSRIMGNIWDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKGLQE 719
Query: 661 FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ 720
FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ
Sbjct: 720 FLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQ 779
Query: 721 AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA 780
AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA
Sbjct: 780 AIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKELTGALIA 839
Query: 781 SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE 840
SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE
Sbjct: 840 SLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRE 899
Query: 841 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI 900
SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI
Sbjct: 900 SLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHGEPEEDI 959
Query: 901 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH 960
VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH
Sbjct: 960 VGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHH 1019
Query: 961 FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD 1020
FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD
Sbjct: 1020 FEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMD 1079
Query: 1021 LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE 1080
LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE
Sbjct: 1080 LLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGE 1139
Query: 1081 FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA 1140
FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA
Sbjct: 1140 FLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLA 1199
Query: 1141 ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP 1200
ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP
Sbjct: 1200 ECKLAIIHCAGYSDPILVQTLWQDIIEKELSDSVTLSSSDRMHALSLKIVLLGKIYAGTP 1259
Query: 1201 RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK 1260
RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK
Sbjct: 1260 RFFPLDFIVQFLEQQVCTLNWDVGFVIQTMNEIGVPLPRLLEVYDQLFKSRDPFWNRMKK 1319
Query: 1261 PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN 1320
PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN
Sbjct: 1320 PLHLLDCIHVLLIRYVENPSQVLNCERRRFTNLCLDAVCGYLVELQSMSSSVAVQAITGN 1379
Query: 1321 FKSLQAKLERLH 1332
FKSLQAKLERLH
Sbjct: 1380 FKSLQAKLERLH 1391
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 41.2 bits (95), Expect = 0.007
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 519 GEAQMRFPTTLPPPSNVGPILG----SPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMS 574
G +R P PP + P LG SP+ + SP SP PS PS PP+ +
Sbjct: 267 GLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQA 326
Query: 575 TPVCALGNPATQATN 589
T +LG+P QAT+
Sbjct: 327 T--TSLGSPTLQATH 339
Score = 35.0 bits (79), Expect = 0.48
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 531 PPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQA 587
PPS P L +P P P SP +PS P PP ++ P L P QA
Sbjct: 427 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ---APPPLAAPPLQLAKPPPQA 480
>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
sapiens]
Length = 753
Score = 38.5 bits (88), Expect = 0.043
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Query: 521 AQMRFPT-TLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCA 579
A RF T T+ PP + SP S+P+P SP P+P H QPP + P
Sbjct: 553 AHARFATSTIQPPREYSSV--SPCPRSAPIPQASPIPHP-------HVYQPPPLGHPATL 603
Query: 580 LGNP 583
G P
Sbjct: 604 FGTP 607
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 37.7 bits (86), Expect = 0.074
Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 646 QLLESVLQELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQ 705
Q L + +++L+ Q + + L + + +KVQQ+ + ++ + G QQ Q LQ
Sbjct: 1531 QKLTAQVEQLEVFQREQTKQVEELSKKLADSDQASKVQQQKLKAVQAQGGESQQEAQRLQ 1590
Query: 706 RKFHE--AQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQ--KELQEQLKI 761
+ +E AQLS+K QA +KL E T A+ Q +ELQEQL+
Sbjct: 1591 AQLNELQAQLSQK-------------EQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLR- 1636
Query: 762 TTFKDLVIRDKEL 774
+ + L +KEL
Sbjct: 1637 -SLEQLQKENKEL 1648
>gi|169164209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 36.6 bits (83), Expect = 0.17
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 14/79 (17%)
Query: 526 PTTLPP-PSNVGPILGSPVYSSSPVPSGSPYPN--------PSFLGTPSHGIQPPAMST- 575
P LPP P+ P++G P + P PS SP P+ PS T S P A T
Sbjct: 18 PPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTE 77
Query: 576 ----PVCALGNPATQATNM 590
P C G A A M
Sbjct: 78 PAVPPSCGSGPGAAGALRM 96
>gi|239741571 PREDICTED: hypothetical protein XP_002342241 [Homo
sapiens]
Length = 179
Score = 36.6 bits (83), Expect = 0.17
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 14/79 (17%)
Query: 526 PTTLPP-PSNVGPILGSPVYSSSPVPSGSPYPN--------PSFLGTPSHGIQPPAMST- 575
P LPP P+ P++G P + P PS SP P+ PS T S P A T
Sbjct: 18 PPDLPPTPTRRAPLIGCPPSPARPAPSASPSPSRAAGPFLPPSHASTSSRSPPPRARRTE 77
Query: 576 ----PVCALGNPATQATNM 590
P C G A A M
Sbjct: 78 PAVPPSCGSGPGAAGALRM 96
>gi|40807452 peroxisome proliferator-activated receptor gamma,
coactivator-related 1 [Homo sapiens]
Length = 1664
Score = 36.2 bits (82), Expect = 0.22
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 7/70 (10%)
Query: 526 PTTLPPPS---NVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGN 582
P L PPS ++GP+L P +P+PS YP+ S G P PP + P+ + G
Sbjct: 894 PPPLQPPSLPLSMGPVLPDPFTHYAPLPSWPCYPHVSPSGYP---CLPPPPTVPLVS-GT 949
Query: 583 PATQATNMSC 592
P A +C
Sbjct: 950 PGAYAVPPTC 959
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 36.2 bits (82), Expect = 0.22
Identities = 90/483 (18%), Positives = 195/483 (40%), Gaps = 62/483 (12%)
Query: 654 ELKGLQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQL 713
+++ LQ ++ S+ A TT K + +L+ + ++ E+ + +
Sbjct: 1092 DVEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERMLKDEVSKCVCRCED 1151
Query: 714 SEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQLKITTFKDLVIRDKE 773
EK + Q+ + S + +A K + + ++E K ++ L+I F + R+KE
Sbjct: 1152 LEKQNRLLHDQIEKLSDKVVASVKEGVQGPLNVSLSEEGKSQEQILEILRF---IRREKE 1208
Query: 774 LTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAI------CSKANELLQRSRQ 827
+ +R V+ + LQ++ L + + + ++ EL++++
Sbjct: 1209 IAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTET 1268
Query: 828 VQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGVVELSLTAAEKKDPQGLG 887
+ E +MLRE + ++ DL + A+ R++ ++ L AE + G+
Sbjct: 1269 MNVVMETNKMLREEKERLEQ-----DLQQMQAKVRKLEL--DILPLQEANAELSEKSGM- 1320
Query: 888 LHFYKHGEPEEDIVGLQAFQERLNSYKCITDT------LQELVNQSKAAPQSPSVPKKPG 941
L K EED+ +A + L S + DT L E +K Q +
Sbjct: 1321 LQAEKK-LLEEDVKRWKARNQHLVSQQKDPDTEEYRKLLSEKEVHTKRIQQLTEEIGRLK 1379
Query: 942 PPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFL 1001
+ S+ ++ +N+ L Q K++L + IQ DL K++ +
Sbjct: 1380 AEIARSNASLTNNQN----------LIQSLKEDLNKVRTEKETIQKDLDAKIIDIQEKVK 1429
Query: 1002 EPHLVRMAKVDQN-RVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIA 1060
+ ++ K+ + + +Y +L ++++ +A+ + H + +Q+ E +
Sbjct: 1430 T--ITQVKKIGRRYKTQYEELK---AQQDKVMETSAQSSGDHQEQHVSVQEMQELKETLN 1484
Query: 1061 RAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLD 1120
+A +KS LE ++E +Q+TL + + ++Q+ QL
Sbjct: 1485 QAETKSKS----------------LESQVE------NLQKTLSEKETEARNLQEQTVQLQ 1522
Query: 1121 SEL 1123
SEL
Sbjct: 1523 SEL 1525
>gi|169215453 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 35.8 bits (81), Expect = 0.28
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 526 PTTLPPPSNVG---PILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGN 582
P + PP +V P + P SSP+P P P+ P +QPPA+S+P A
Sbjct: 501 PPRVQPPCHVSSPPPRVQPPCRVSSPLPRVQP---PAACPAPLLRVQPPAVSSPP-ACPA 556
Query: 583 PATQATNMSCVTGPEIVYSGKHNGICI 609
PATQ + T SG + +C+
Sbjct: 557 PATQGSRSQQPTVQPASVSGVLDTLCL 583
>gi|169215350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 707
Score = 35.4 bits (80), Expect = 0.37
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Query: 526 PTTLPPPSNVG---PILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGN 582
P + PP V P + P SSP+P P P+ P +QPPA+S+P A
Sbjct: 501 PPRVQPPCRVSSPPPRVQPPCRVSSPLPRVQP---PAACPAPLLRVQPPAVSSPP-ACPA 556
Query: 583 PATQATNMSCVTGPEIVYSGKHNGICI 609
PATQ + T SG + +C+
Sbjct: 557 PATQGSRSQQPTVQPASVSGVLDTLCL 583
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 35.4 bits (80), Expect = 0.37
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 8/63 (12%)
Query: 537 PILGSPVY---SSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATNMSCV 593
PI PV + +PV GSP P P P PP P+C+ P+T+AT S
Sbjct: 1222 PIRSQPVTLPEARTPVSPGSPQPQP-----PVAASTPPPSPLPICSQPQPSTEATVPSPT 1276
Query: 594 TGP 596
P
Sbjct: 1277 QSP 1279
>gi|4503493 early growth response 1 [Homo sapiens]
Length = 543
Score = 35.0 bits (79), Expect = 0.48
Identities = 36/134 (26%), Positives = 55/134 (41%), Gaps = 23/134 (17%)
Query: 474 EEIERFFKLH--QEDQACATCLILACSTAACDREVSAWATRAFFRYGGEAQMRFPTTLPP 531
+E +R K+H Q+D+ ++ + +T++ S AT P T
Sbjct: 409 DERKRHTKIHLRQKDKKADKSVVASSATSSLSSYPSPVAT----------SYPSPVTTSY 458
Query: 532 PSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQ------PPAM-----STPVCAL 580
PS SPV +S P S YP+P G PS + PPA S P A+
Sbjct: 459 PSPATTSYPSPVPTSFSSPGSSTYPSPVHSGFPSPSVATTYSSVPPAFPAQVSSFPSSAV 518
Query: 581 GNPATQATNMSCVT 594
N + +T +S +T
Sbjct: 519 TNSFSASTGLSDMT 532
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 35.0 bits (79), Expect = 0.48
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Query: 531 PPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQA 587
PPS P L +P P P SP +PS P PP ++ P L P QA
Sbjct: 466 PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQ---APPPLAAPPLQLAKPPPQA 519
Score = 31.2 bits (69), Expect = 6.9
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 16/78 (20%)
Query: 526 PTTLPPPS-----NVGPILGSPVYSSS-------PVPSGSPYPN--PSFLGTPSHGIQPP 571
P P PS P L + +SSS P+P P P+ PS PS PP
Sbjct: 303 PLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPATPP 362
Query: 572 AMSTPVCALGNPATQATN 589
+ +T +LG+P QAT+
Sbjct: 363 SQAT--TSLGSPTLQATH 378
>gi|4502443 dystonin isoform 1e precursor [Homo sapiens]
Length = 2649
Score = 35.0 bits (79), Expect = 0.48
Identities = 119/599 (19%), Positives = 238/599 (39%), Gaps = 94/599 (15%)
Query: 576 PVCALGNPATQATNMSCVTGPEIVYSGKHNGICIYFSRIMGNIWDASLVVERIFKSGNRE 635
PVC P TQAT+ VTG + + + + + + A+ E+ + E
Sbjct: 1336 PVC----PITQATSCRAVTGLQQEHDKQK---AEELKQQVDELTAANRKAEQDMRELTYE 1388
Query: 636 ITAIESSVPCQLLESVLQELKG--LQEFLDRNSQFAGGPLGNPNTTAKVQQRLIGFMRPE 693
+ A++ LE E K L++ LD + NT ++ L + E
Sbjct: 1389 LNALQ-------LEKTSSEEKARLLKDKLDETN----------NTLRCLKLELERKDQAE 1431
Query: 694 NGNPQQMQQELQRKFHEAQLSEKISLQAIQQL--VRKSYQALALWKLLCEH--------Q 743
G QQ++ EL R+ ++ + ++Q L ++++YQ L L L E +
Sbjct: 1432 KGYSQQLR-ELGRQLNQTTGKAEEAMQEASDLKKIKRNYQ-LELESLNHEKGKLQREVDR 1489
Query: 744 FTIIVAELQKELQE-QLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQD 802
T A +K +Q +I +F+D +KEL I + ++++ L LQ+
Sbjct: 1490 ITRAHAVAEKNIQHLNSQIHSFRD----EKELERLQICQRKSDHLKEQFEKSHEQL-LQN 1544
Query: 803 ICPLLYSTDDAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDL--SNVCAQ 860
I + D + NE L++S E ML++ ++E + +N+ L + A+
Sbjct: 1545 IKAEKENNDKI--QRLNEELEKSN------ECAEMLKQKVEELTRQNNETKLMMQRIQAE 1596
Query: 861 YRQVRFYEGVVE-----LSLTAAEKKDP-QGLGLHFYKHGEPEEDIVGLQAFQERLNSYK 914
+ + ++ L + A KD + H +K + E+D FQ ++ K
Sbjct: 1597 SENIVLEKQTIQQRCEALKIQADGFKDQLRSTNEHLHKQTKTEQD------FQRKI---K 1647
Query: 915 CITDTL---QELVNQSKA-APQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQR 970
C+ + L Q LV++ K Q + + V + + + +++E EQ ++L Q
Sbjct: 1648 CLEEDLAKSQNLVSEFKQKCDQQNIIIQNTKKEVRNLNAELNASKEEKRRGEQKVQLQQA 1707
Query: 971 SKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNR 1030
EL + L+ L + + V + + ++ +
Sbjct: 1708 QVQEL---------------NNRLKKVQDELHLKTIEEQMTHRKMVLFQEESGKFKQSAE 1752
Query: 1031 SFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKME 1090
F L + +IS RL++++ L ++S A + + ELE +++
Sbjct: 1753 EFRKKMEKLMESKVITENDIS-GIRLDFVS---LQQENSRAQENAKLCETNIKELERQLQ 1808
Query: 1091 VARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMDITKLYGEFADPFKLAECKLAIIHC 1149
R Q+Q + ++ +H+ Q +L ++ ++ L + K E +L ++ C
Sbjct: 1809 QYREQMQQGQHMEA--NHYQKCQKLEDELIAQKREVENLKQKMDQQIKEHEHQLVLLQC 1865
>gi|156104901 ankyrin repeat domain 20 family, member A1 [Homo
sapiens]
Length = 823
Score = 35.0 bits (79), Expect = 0.48
Identities = 24/103 (23%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 1033 SNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVA 1092
S A +S+ ++ TE +L+ LE + + S+AIS + A+ EFL E + ++
Sbjct: 611 SRLAAAISKHSESVKTERNLKLALERTRDVSVQVEMSSAISKVKAENEFLTEQLSETQIK 670
Query: 1093 RIQL-----QIQETLQRQYSHHSSVQDAVSQLDSELMDITKLY 1130
L + +++L+++ +VQ+ +SQ + ++ ++Y
Sbjct: 671 FNALKDKFRKTRDSLRKKSLALETVQNDLSQTQQQTQEMKEMY 713
>gi|27734799 REST corepressor 2 [Homo sapiens]
Length = 523
Score = 35.0 bits (79), Expect = 0.48
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 522 QMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMS 574
Q R PPP + P L +P +S+ P P P P+ +G P ++PPA S
Sbjct: 477 QPRLAPNQPPPPLIRPALAAPRHSARP----GPQPPPTLIGAP---LEPPAPS 522
>gi|28269672 serologically defined colon cancer antigen 8 [Homo
sapiens]
Length = 713
Score = 35.0 bits (79), Expect = 0.48
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 27/187 (14%)
Query: 951 MLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAK 1010
+LS H + + +L + +D+L S + ++ LAD + AS + + V
Sbjct: 292 VLSQTHTNVHMQTIERLV-KERDDLMSALVS---VRSSLADTQQREASAYEQVKQVLQIS 347
Query: 1011 VDQNRVRYMDLLWRYYEKNRSFSNAARV---LSRLADMHSTEISLQQRLEYIARAILSAK 1067
+ N +EK ++ ++ L R A+ E++ QQ I + ++ +
Sbjct: 348 EEAN-----------FEKTKALIQCDQLRKELERQAERLEKELASQQEKRAIEKDMMKKE 396
Query: 1068 SSTAISSIAADGEFLHE--LEEKMEVARIQLQIQETLQRQYSHHSSVQDAVSQLDSELMD 1125
I + E++ L +A+++ Q+++ + + S + +++ SQL S MD
Sbjct: 397 -------ITKEREYMGSKMLILSQNIAQLEAQVEKVTKEKISAINQLEEIQSQLASREMD 449
Query: 1126 ITKLYGE 1132
+TK+ GE
Sbjct: 450 VTKVCGE 456
>gi|110611218 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 34.7 bits (78), Expect = 0.63
Identities = 58/331 (17%), Positives = 130/331 (39%), Gaps = 64/331 (19%)
Query: 812 DAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKI--SNQVDLSNVCAQYRQVRFYEG 869
+ + KA + + K + +L+ L+E +K+ + Q D + ++ R++
Sbjct: 239 EILSEKAGIIQDTWHKATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMA 298
Query: 870 VVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQA-----FQERLNSYKCITDTLQELV 924
+ A E K + L E++I +QA ++E + + + ++ L
Sbjct: 299 AEKAKAAAGEAKVKKQLVAR-------EQEITAVQARMQASYREHVKEVQQLQGKIRTLQ 351
Query: 925 NQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWL 984
Q + P + + +L N +++ ++ KL Q
Sbjct: 352 EQLENGPNTQLARLQQENSILRDALNQATSQVESKQNAELAKLRQ--------------- 396
Query: 985 IQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLAD 1044
+L +V+ +E + D+ + + ++ +EK +VL A
Sbjct: 397 -------ELSKVSKELVEKS--EAVRQDEQQRKALEAKAAAFEK--------QVLQLQAS 439
Query: 1045 MHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQR 1104
+E +LQ+RL+ ++R + +SS A S+ AD E + QE Q+
Sbjct: 440 HRESEEALQKRLDEVSRELCHTQSSHA--SLRADAE----------------KAQEQQQQ 481
Query: 1105 QYSHHSSVQDAVSQLDSELMDITKLYGEFAD 1135
HS +Q + +++ S+ +++ L+G+ +
Sbjct: 482 MAELHSKLQSSEAEVRSKCEELSGLHGQLQE 512
>gi|110611220 ribosome binding protein 1 [Homo sapiens]
Length = 977
Score = 34.7 bits (78), Expect = 0.63
Identities = 58/331 (17%), Positives = 130/331 (39%), Gaps = 64/331 (19%)
Query: 812 DAICSKANELLQRSRQVQNKTEKERMLRESLKEYQKI--SNQVDLSNVCAQYRQVRFYEG 869
+ + KA + + K + +L+ L+E +K+ + Q D + ++ R++
Sbjct: 239 EILSEKAGIIQDTWHKATQKGDPVAILKRQLEEKEKLLATEQEDAAVAKSKLRELNKEMA 298
Query: 870 VVELSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQA-----FQERLNSYKCITDTLQELV 924
+ A E K + L E++I +QA ++E + + + ++ L
Sbjct: 299 AEKAKAAAGEAKVKKQLVAR-------EQEITAVQARMQASYREHVKEVQQLQGKIRTLQ 351
Query: 925 NQSKAAPQSPSVPKKPGPPVLSSDPNMLSNEEAGHHFEQMLKLSQRSKDELFSIALYNWL 984
Q + P + + +L N +++ ++ KL Q
Sbjct: 352 EQLENGPNTQLARLQQENSILRDALNQATSQVESKQNAELAKLRQ--------------- 396
Query: 985 IQVDLADKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRLAD 1044
+L +V+ +E + D+ + + ++ +EK +VL A
Sbjct: 397 -------ELSKVSKELVEKS--EAVRQDEQQRKALEAKAAAFEK--------QVLQLQAS 439
Query: 1045 MHSTEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKMEVARIQLQIQETLQR 1104
+E +LQ+RL+ ++R + +SS A S+ AD E + QE Q+
Sbjct: 440 HRESEEALQKRLDEVSRELCHTQSSHA--SLRADAE----------------KAQEQQQQ 481
Query: 1105 QYSHHSSVQDAVSQLDSELMDITKLYGEFAD 1135
HS +Q + +++ S+ +++ L+G+ +
Sbjct: 482 MAELHSKLQSSEAEVRSKCEELSGLHGQLQE 512
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 34.7 bits (78), Expect = 0.63
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 526 PTTLPPPSNVGPILGSPVYSSSPVPSGSPYPN-PSFLGTPSHGI--QPPAMSTPV 577
PT P P N G LG SP+ S SP+ N P TPS + +PP PV
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPV 271
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 34.7 bits (78), Expect = 0.63
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 526 PTTLPPPSNVGPILGSPVYSSSPVPSGSPYPN-PSFLGTPSHGI--QPPAMSTPV 577
PT P P N G LG SP+ S SP+ N P TPS + +PP PV
Sbjct: 217 PTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPV 271
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 34.7 bits (78), Expect = 0.63
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 25/90 (27%)
Query: 530 PPP------SNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHG---------------- 567
PPP S +GP GSP+ P P+ +P S P+ G
Sbjct: 485 PPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544
Query: 568 -IQPPAMSTPVCALGNPATQATNMSCVTGP 596
+PPA +P G P QAT + V+GP
Sbjct: 545 AARPPASPSPQRQAGPP--QATRQTSVSGP 572
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 34.7 bits (78), Expect = 0.63
Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 25/90 (27%)
Query: 530 PPP------SNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHG---------------- 567
PPP S +GP GSP+ P P+ +P S P+ G
Sbjct: 485 PPPQGQQHLSGLGPPAGSPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAPP 544
Query: 568 -IQPPAMSTPVCALGNPATQATNMSCVTGP 596
+PPA +P G P QAT + V+GP
Sbjct: 545 AARPPASPSPQRQAGPP--QATRQTSVSGP 572
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 34.7 bits (78), Expect = 0.63
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 710 EAQLSEKISLQAIQ-QLVRKSYQALALWKLLCEHQFTIIVAELQKELQEQL-KITTFKDL 767
E L + IS + ++ Q +RK + KL E QF +V ++ + LQ++ +I +
Sbjct: 1059 EIYLKQTISEKEVELQHIRKDLEE----KLAAEEQFQALVKQMNQTLQDKTNQIDLLQAE 1114
Query: 768 VIRDKELTGALIASLINCYIRDNAAV-----------DGISLH----LQDICPLLYSTDD 812
+ ++ + LI S + D+ A+ G S H L++ L +
Sbjct: 1115 ISENQAIIQKLITSNTDASDGDSVALVKETVVISPPCTGSSEHWKPELEEKILALEKEKE 1174
Query: 813 AICSKANELLQRSRQVQNKT-EKERMLRESLK----EYQKISNQVD-----LSNVCAQYR 862
+ K E L + + K EKER LRE LK +Y ++ Q D N+ Q R
Sbjct: 1175 QLQKKLQEALTSRKAILKKAQEKERHLREELKQQKDDYNRLQEQFDEQSKENENIGDQLR 1234
Query: 863 QVR 865
Q++
Sbjct: 1235 QLQ 1237
Score = 32.0 bits (71), Expect = 4.1
Identities = 48/220 (21%), Positives = 97/220 (44%), Gaps = 21/220 (9%)
Query: 700 MQQELQRKFH-----EAQLSEKISLQAIQQLVRKSYQALALWKLLCEHQFTIIV--AELQ 752
M+Q+LQ K +AQLS+ + QA QQ+VR+ L E + +V A+++
Sbjct: 188 MKQQLQEKEEFISTLQAQLSQTQAEQAAQQVVREKDARFETQVRLHEDELLQLVTQADVE 247
Query: 753 KELQEQLKITTFKDLVIRDKELTGALIASLINCYIRDNAAVDGISLHLQDICPLLYSTDD 812
E+Q++L++ K L ++ L G A +++ ++ A + + L + + +
Sbjct: 248 TEMQQKLRVLQRK-LEEHEESLVGR--AQVVDLLQQELTAAEQRNQILSQQLQQMEAEHN 304
Query: 813 AICSKANELLQRSRQVQNKTEKERMLRESLKEYQKISNQVDLSNVCAQYRQVRFYEGVVE 872
+ + + S+ + K E E + E + + Q ++ ++ Q+ Q + +E
Sbjct: 305 TLRNTVETEREESKILLEKMELE--VAERKLSFHNL--QEEMHHLLEQFEQAGQAQAELE 360
Query: 873 LSLTAAEKKDPQGLGLHFYKHGEPEEDIVGLQAFQERLNS 912
+A E+K H + E I+ LQ + L S
Sbjct: 361 SRYSALEQK-------HKAEMEEKTSHILSLQKTGQELQS 393
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 34.3 bits (77), Expect = 0.82
Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 11/66 (16%)
Query: 525 FPTTLPPPSNVGPILGSP---VYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALG 581
FP+T P G + GSP VY S P P+ PYP+ PS P +S + G
Sbjct: 589 FPSTFSP---AGSVEGSPMHGVYMSQPAPAAGPYPS-----MPSTAADPSMVSAYMYPAG 640
Query: 582 NPATQA 587
QA
Sbjct: 641 ATGAQA 646
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 34.3 bits (77), Expect = 0.82
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 530 PPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATN 589
P P+ +P Y+ SPVP+ +P P P++ +P+ P + V G PA A+
Sbjct: 321 PSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNP---APSVAYSGGPAEPASR 377
Query: 590 MSCVT 594
VT
Sbjct: 378 PPWVT 382
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 34.3 bits (77), Expect = 0.82
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 530 PPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPATQATN 589
P P+ +P Y+ SPVP+ +P P P++ +P+ P + V G PA A+
Sbjct: 431 PSPAPAYTPSPAPAYTPSPVPTYTPSPAPAYTPSPAPNYNP---APSVAYSGGPAEPASR 487
Query: 590 MSCVT 594
VT
Sbjct: 488 PPWVT 492
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 34.3 bits (77), Expect = 0.82
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 526 PTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSH-GIQPPAMSTPVCALGNPA 584
P PP GP P + +P P+ +P L TP H G PA+ TP G PA
Sbjct: 1244 PAATPPSPKGGPATPPPKGAPTP-PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPA 1302
Query: 585 T 585
T
Sbjct: 1303 T 1303
Score = 33.5 bits (75), Expect = 1.4
Identities = 23/72 (31%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 526 PTTLPPPS-NVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPA 584
P + PPS GP P + +P + P P S P G P TP G P
Sbjct: 1289 PAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPT 1348
Query: 585 TQATNMSCVTGP 596
AT S GP
Sbjct: 1349 LPATTPSSKGGP 1360
Score = 33.1 bits (74), Expect = 1.8
Identities = 18/60 (30%), Positives = 23/60 (38%)
Query: 526 PTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTPSHGIQPPAMSTPVCALGNPAT 585
P PP GP SP ++ +P + P P G P +TP G PAT
Sbjct: 943 PAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPAT 1002
Score = 32.7 bits (73), Expect = 2.4
Identities = 22/72 (30%), Positives = 26/72 (36%), Gaps = 1/72 (1%)
Query: 526 PTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFLGTP-SHGIQPPAMSTPVCALGNPA 584
P PP GP SP + +P P P S TP G P +TP G+PA
Sbjct: 989 PAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPA 1048
Query: 585 TQATNMSCVTGP 596
T P
Sbjct: 1049 ATPLPKGAPTTP 1060
>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
Length = 2325
Score = 34.3 bits (77), Expect = 0.82
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 989 LADKLLQVASPFLEPHLVRMAKVDQNRVRYMDLLWRYYEKNRSFSNAARVLSRL-ADMHS 1047
LA L +A L+ + K++Q R + R+ +R + AAR L+R A++
Sbjct: 989 LATAELTIAKDQLKSLHGTVMKINQERAEELQEAERF---SRKAAQAARDLTRAEAEIEL 1045
Query: 1048 TEISLQQRLEYIARAILSAKSSTAISSIAADGEFLHELEEKM--EVARIQLQIQETLQRQ 1105
+ L+Q+ E + T +S + E L+E E+ E+AR+Q + T
Sbjct: 1046 LQNLLRQKGEQFRLEMEKTGVGTGANSQVLEIEKLNETMERQRTEIARLQNVLDLTGSDN 1105
Query: 1106 YSHHSSVQDAVSQLDSELMDITKLYGEFADPFK 1138
+V + +++L E+ ADPFK
Sbjct: 1106 KGGFENVLEEIAELRREVSYQNDYISSMADPFK 1138
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,790,402
Number of Sequences: 37866
Number of extensions: 2440184
Number of successful extensions: 9908
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 109
Number of HSP's that attempted gapping in prelim test: 9520
Number of HSP's gapped (non-prelim): 501
length of query: 1332
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1218
effective length of database: 13,930,794
effective search space: 16967707092
effective search space used: 16967707092
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.