CAPS 30570

Name: CAPS	Sequence: fasta or formatted (189aa)		NCBI GI: 4757908
Description: calcyphosine isoform a		Referenced in: Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [162aa] calcyphosine isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.1 21 3 C cysteine 1.1 2 1 D aspartate 10.1 19 2 E glutamate 7.4 14 2 F phenylalanine 4.8 9 2 G glycine 8.5 16 1 H histidine 0.5 1 1 I isoleucine 1.1 2 1 K lysine 3.2 6 1 L leucine 10.1 19 1 M methionine 3.2 6 2 N asparagine 1.6 3 1 P proline 1.6 3 2 Q glutamine 4.8 9 1 R arginine 9.5 18 2 S serine 7.9 15 2 T threonine 3.7 7 1 V valine 6.9 13 2 W tryptophan 1.6 3 1 Y tyrosine 1.6 3 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcyphosine isoform a CAPS 0.800 calcyphosine isoform b CAPSL 0.531 calcyphosine-like CAPSL 0.531 calcyphosine-like CAPS2 0.140 calcyphosine 2 TNNC2 0.097 fast skeletal muscle troponin C CALML3 0.091 calmodulin-like 3 CALML5 0.091 calmodulin-like 5 CALM3 0.083 calmodulin 3 CALM2 0.083 calmodulin 2 CALM1 0.083 calmodulin 1 SLC25A23 0.083 solute carrier family 25, member 23 SLC25A24 0.083 solute carrier family 25 member 24 isoform 1 CETN1 0.071 centrin 1 LOC100292202 0.066 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.066 solute carrier family 25, member 25 isoform b CETN2 0.063 caltractin CETN3 0.063 centrin 3 VSNL1 0.060 visinin-like 1 SLC25A24 0.060 solute carrier family 25 member 24 isoform 2 HPCAL4 0.057 hippocalcin-like protein 4 CABP7 0.054 calcium binding protein 7 CABP5 0.054 calcium binding protein 5 TNNC1 0.054 troponin C, slow HPCAL1 0.054 hippocalcin-like 1 HPCAL1 0.054 hippocalcin-like 1 HPCA 0.054 hippocalcin CABP1 0.051 calcium binding protein 1 isoform 3 CABP1 0.051 calcium binding protein 1 isoform 2 CABP1 0.051 calcium binding protein 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.