HPCA 11603

Name: HPCA	Sequence: fasta or formatted (193aa)		NCBI GI: 19913446
Description: hippocalcin		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 8 1 C cysteine 1.0 2 1 D aspartate 7.3 14 1 E glutamate 9.8 19 2 F phenylalanine 7.3 14 2 G glycine 5.2 10 1 H histidine 0.5 1 1 I isoleucine 5.7 11 2 K lysine 7.3 14 2 L leucine 8.3 16 2 M methionine 4.7 9 1 N asparagine 4.1 8 2 P proline 3.6 7 1 Q glutamine 4.1 8 1 R arginine 5.7 11 1 S serine 8.8 17 2 T threonine 4.7 9 1 V valine 3.6 7 1 W tryptophan 1.0 2 1 Y tyrosine 3.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hippocalcin HPCAL1 0.945 hippocalcin-like 1 HPCAL1 0.945 hippocalcin-like 1 NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta NCALD 0.893 neurocalcin delta HPCAL4 0.674 hippocalcin-like protein 4 VSNL1 0.671 visinin-like 1 FREQ 0.586 frequenin homolog isoform 1 FREQ 0.515 frequenin homolog isoform 2 RCVRN 0.501 recoverin KCNIP1 0.414 Kv channel interacting protein 1 isoform 3 KCNIP1 0.414 Kv channel interacting protein 1 isoform 1 KCNIP1 0.414 Kv channel interacting protein 1 isoform 2 KCNIP2 0.405 Kv channel interacting protein 2 isoform 5 KCNIP2 0.405 Kv channel interacting protein 2 isoform 6 KCNIP2 0.405 Kv channel interacting protein 2 isoform 3 KCNIP2 0.405 Kv channel interacting protein 2 isoform 1 KCNIP2 0.405 Kv channel interacting protein 2 isoform 2 KCNIP2 0.389 Kv channel interacting protein 2 isoform 4 KCNIP4 0.386 Kv channel interacting protein 4 isoform 3 KCNIP4 0.386 Kv channel interacting protein 4 isoform 5 KCNIP4 0.386 Kv channel interacting protein 4 isoform 4 KCNIP4 0.386 Kv channel interacting protein 4 isoform 3 KCNIP4 0.386 Kv channel interacting protein 4 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.