HPCAL1 11602

Name: HPCAL1	Sequence: fasta or formatted (193aa)		NCBI GI: 19913443
Description: hippocalcin-like 1		Referenced in: Neurons
Other entries for this name: alt mRNA [193aa] hippocalcin-like 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 8 1 C cysteine 1.0 2 1 D aspartate 8.3 16 1 E glutamate 8.3 16 2 F phenylalanine 7.3 14 2 G glycine 5.7 11 1 H histidine 1.6 3 1 I isoleucine 5.2 10 2 K lysine 8.3 16 2 L leucine 7.8 15 2 M methionine 3.6 7 1 N asparagine 3.6 7 2 P proline 3.6 7 1 Q glutamine 4.1 8 1 R arginine 5.2 10 1 S serine 8.3 16 2 T threonine 5.7 11 1 V valine 4.1 8 1 W tryptophan 1.0 2 1 Y tyrosine 3.1 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hippocalcin-like 1 HPCAL1 1.000 hippocalcin-like 1 HPCA 0.935 hippocalcin NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta NCALD 0.927 neurocalcin delta VSNL1 0.683 visinin-like 1 HPCAL4 0.667 hippocalcin-like protein 4 FREQ 0.593 frequenin homolog isoform 1 FREQ 0.520 frequenin homolog isoform 2 RCVRN 0.504 recoverin KCNIP1 0.398 Kv channel interacting protein 1 isoform 3 KCNIP1 0.398 Kv channel interacting protein 1 isoform 1 KCNIP1 0.398 Kv channel interacting protein 1 isoform 2 KCNIP2 0.382 Kv channel interacting protein 2 isoform 5 KCNIP2 0.382 Kv channel interacting protein 2 isoform 6 KCNIP2 0.382 Kv channel interacting protein 2 isoform 3 KCNIP2 0.382 Kv channel interacting protein 2 isoform 1 KCNIP2 0.382 Kv channel interacting protein 2 isoform 2 KCNIP3 0.374 Kv channel interacting protein 3 isoform 2 KCNIP3 0.374 Kv channel interacting protein 3 isoform 1 KCNIP2 0.366 Kv channel interacting protein 2 isoform 4 KCNIP4 0.366 Kv channel interacting protein 4 isoform 3 KCNIP4 0.366 Kv channel interacting protein 4 isoform 5 KCNIP4 0.366 Kv channel interacting protein 4 isoform 4 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.