CAPS 9735

Name: CAPS	Sequence: fasta or formatted (162aa)		NCBI GI: 18104964
Description: calcyphosine isoform b		Referenced in: Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [189aa] calcyphosine isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 13.0 21 3 C cysteine 1.2 2 1 D aspartate 9.3 15 2 E glutamate 6.2 10 2 F phenylalanine 4.3 7 2 G glycine 8.6 14 1 H histidine 0.6 1 1 I isoleucine 1.2 2 1 K lysine 3.1 5 1 L leucine 10.5 17 1 M methionine 3.7 6 2 N asparagine 1.2 2 1 P proline 1.9 3 2 Q glutamine 4.9 8 1 R arginine 9.3 15 1 S serine 7.4 12 1 T threonine 3.7 6 1 V valine 6.8 11 2 W tryptophan 1.2 2 1 Y tyrosine 1.9 3 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calcyphosine isoform b CAPS 0.949 calcyphosine isoform a CAPSL 0.468 calcyphosine-like CAPSL 0.468 calcyphosine-like CAPS2 0.156 calcyphosine 2 CALML5 0.102 calmodulin-like 5 SLC25A23 0.098 solute carrier family 25, member 23 SLC25A24 0.098 solute carrier family 25 member 24 isoform 1 CALM3 0.092 calmodulin 3 CALM2 0.092 calmodulin 2 CALM1 0.092 calmodulin 1 CALML3 0.081 calmodulin-like 3 TNNC2 0.081 fast skeletal muscle troponin C SLC25A24 0.071 solute carrier family 25 member 24 isoform 2 CABP7 0.064 calcium binding protein 7 CALN1 0.064 calneuron 1 isoform 2 CALN1 0.064 calneuron 1 isoform 1 CABP5 0.064 calcium binding protein 5 LOC100292202 0.064 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.064 solute carrier family 25, member 25 isoform b CABP1 0.061 calcium binding protein 1 isoform 3 CABP1 0.061 calcium binding protein 1 isoform 2 CABP1 0.061 calcium binding protein 1 isoform 1 CABP2 0.061 calcium binding protein 2 isoform 2 CABP2 0.061 calcium binding protein 2 isoform 1 LOC100292202 0.058 PREDICTED: similar to solute carrier family 25, mem... SLC25A25 0.058 solute carrier family 25, member 25 isoform c SLC25A25 0.058 solute carrier family 25, member 25 isoform a CALML6 0.058 calmodulin-like 6 CETN1 0.058 centrin 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.