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Search of human proteins with 4757876
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757876 bone marrow stromal cell antigen 2 [Homo sapiens]
(180 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757876 bone marrow stromal cell antigen 2 [Homo sapiens] 347 4e-96
gi|21735548 centrosomal protein 2 [Homo sapiens] 39 0.002
gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... 39 0.002
gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... 39 0.002
gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... 39 0.002
gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... 39 0.002
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens] 38 0.004
gi|148762940 DVL-binding protein DAPLE [Homo sapiens] 38 0.004
gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-l... 38 0.005
gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-l... 38 0.005
gi|68299759 ecotropic viral integration site 5 [Homo sapiens] 37 0.009
gi|56550047 uveal autoantigen with coiled-coil domains and ankyr... 37 0.009
gi|59850762 uveal autoantigen with coiled-coil domains and ankyr... 37 0.009
gi|83415174 hypothetical protein LOC400818 [Homo sapiens] 36 0.020
gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens] 36 0.020
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 35 0.027
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 35 0.027
gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1 [... 35 0.027
gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2 [... 35 0.027
gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3 [... 35 0.027
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens] 35 0.035
gi|223671856 coiled-coil domain containing 85C [Homo sapiens] 35 0.045
gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.045
gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.045
gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.045
gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-l... 35 0.045
gi|239741297 PREDICTED: neuroblastoma breakpoint family, member ... 35 0.045
gi|167555110 kinesin family member C1 [Homo sapiens] 35 0.045
gi|29294627 PTPRF interacting protein binding protein 1 isoform ... 35 0.045
gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo... 35 0.045
>gi|4757876 bone marrow stromal cell antigen 2 [Homo sapiens]
Length = 180
Score = 347 bits (889), Expect = 4e-96
Identities = 180/180 (100%), Positives = 180/180 (100%)
Query: 1 MASTSYDYCRVPMEDGDKRCKLLLGIGILVLLIIVILGVPLIIFTIKANSEACRDGLRAV 60
MASTSYDYCRVPMEDGDKRCKLLLGIGILVLLIIVILGVPLIIFTIKANSEACRDGLRAV
Sbjct: 1 MASTSYDYCRVPMEDGDKRCKLLLGIGILVLLIIVILGVPLIIFTIKANSEACRDGLRAV 60
Query: 61 MECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI 120
MECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI
Sbjct: 61 MECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI 120
Query: 121 TTLNHKLQDASAEVERLRRENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVLLGLSALLQ 180
TTLNHKLQDASAEVERLRRENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVLLGLSALLQ
Sbjct: 121 TTLNHKLQDASAEVERLRRENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVLLGLSALLQ 180
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 38.9 bits (89), Expect = 0.002
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQG---QKKVEELEGEITTLNH 125
L++ LT ++ QD+ Q A C V L D + +G ++++++L GE TL
Sbjct: 390 LVRSVLTRRRQAVQDLRQQLAGCQEAVNLLQQQHDQWEEEGKALRQRLQKLTGERDTLAG 449
Query: 126 KLQDASAEVERLRRENQVL 144
+ D EV+ L +E ++L
Sbjct: 450 QTVDLQGEVDSLSKERELL 468
Score = 33.1 bits (74), Expect = 0.13
Identities = 21/79 (26%), Positives = 38/79 (48%)
Query: 64 RNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTL 123
+ T +LQ +L EAQ+ ++ Q + +SL +K QK+VE+L+ ++
Sbjct: 963 QETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQ 1022
Query: 124 NHKLQDASAEVERLRRENQ 142
+ + EV+ RE Q
Sbjct: 1023 DDSQRLVEQEVQEKLRETQ 1041
Score = 30.0 bits (66), Expect = 1.1
Identities = 16/83 (19%), Positives = 35/83 (42%)
Query: 60 VMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGE 119
+ E + + L+Q+L + + + ++ L L + QG+ K + L+ +
Sbjct: 1745 IHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKEQSLQSQ 1804
Query: 120 ITTLNHKLQDASAEVERLRRENQ 142
+ L E+E L++E Q
Sbjct: 1805 LDEAQRALAQRDQELEALQQEQQ 1827
Score = 29.6 bits (65), Expect = 1.5
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 61 MECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI 120
+E R + E +AQ+ + +A++A C L+ EK ++V LE +
Sbjct: 887 LEMRLKEQQTEMEAIQAQREEERTQAESALCQ-------MQLETEK----ERVSLLETLL 935
Query: 121 TTLNHKLQDASAEVERLRRENQVLSVR 147
T +L DAS ++ERLR++ +V ++
Sbjct: 936 QT-QKELADASQQLERLRQDMKVQKLK 961
Score = 26.9 bits (58), Expect = 9.5
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 61 MECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEI 120
MEC QQ+L + +G ++ + A T H + L +AQ + + +LE
Sbjct: 1569 MEC-------QQKLIKELEGQRETQRVALT--HLTLDLEERSQELQAQSSQ-IHDLESHS 1618
Query: 121 TTLNHKLQDASAEVERLRRENQVL 144
T L +LQ+ EV+ R + + L
Sbjct: 1619 TVLARELQERDQEVKSQREQIEEL 1642
>gi|13124879 smooth muscle myosin heavy chain 11 isoform SM1A [Homo
sapiens]
Length = 1972
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 53 CRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLD--------- 103
C DG RA E + H LQ E+ + E +A V +L + L
Sbjct: 1268 CSDGERARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQLQDTQELLQEE 1327
Query: 104 -AEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKK 152
+K K+ +LE E +L +L + + L R L+++++D K
Sbjct: 1328 TRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 1377
Score = 34.3 bits (77), Expect = 0.059
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 72 QELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQ---KKVEELEGEITTLNHKLQ 128
+++ + Q +++ Q A + A +A LD E AQ KK+ ELEG I+ L L
Sbjct: 1069 EQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLD 1128
Query: 129 DASA---EVERLRR----ENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVL 172
A + E+ +R E + L + D ++Q A Q + VL
Sbjct: 1129 SERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVL 1179
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 47 KANSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEK 106
KA E R V E R +ELTE + F+ +A +LD K
Sbjct: 1181 KALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA--------------NLDKNK 1226
Query: 107 AQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+K+ +L GE+ L Q+ + ++L + Q L + +D
Sbjct: 1227 QTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSD 1270
Score = 27.7 bits (60), Expect = 5.6
Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 45 TIKANSEACRDGLRAVMECRNVTHLLQQELTE-------AQKGFQD----VEAQAATCNH 93
+++A+ ++ L A R L ++EL E + QD +EA+ A
Sbjct: 1684 SLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE 1743
Query: 94 TVMALMASLDAEKAQGQK---KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+ +++A + +K + E+L E+ T Q + ++L R+N+ L ++ +
Sbjct: 1744 ELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHE 1803
Query: 151 KKYYPSSQDSSSAAAPQLLIVLL 173
+ S+ S+ AA + I L
Sbjct: 1804 MEGAVKSKFKSTIAALEAKIAQL 1826
>gi|92091586 smooth muscle myosin heavy chain 11 isoform SM1B [Homo
sapiens]
Length = 1979
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 53 CRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLD--------- 103
C DG RA E + H LQ E+ + E +A V +L + L
Sbjct: 1275 CSDGERARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQLQDTQELLQEE 1334
Query: 104 -AEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKK 152
+K K+ +LE E +L +L + + L R L+++++D K
Sbjct: 1335 TRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 1384
Score = 34.3 bits (77), Expect = 0.059
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 72 QELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQ---KKVEELEGEITTLNHKLQ 128
+++ + Q +++ Q A + A +A LD E AQ KK+ ELEG I+ L L
Sbjct: 1076 EQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLD 1135
Query: 129 DASA---EVERLRR----ENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVL 172
A + E+ +R E + L + D ++Q A Q + VL
Sbjct: 1136 SERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVL 1186
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 47 KANSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEK 106
KA E R V E R +ELTE + F+ +A +LD K
Sbjct: 1188 KALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA--------------NLDKNK 1233
Query: 107 AQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+K+ +L GE+ L Q+ + ++L + Q L + +D
Sbjct: 1234 QTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSD 1277
Score = 27.7 bits (60), Expect = 5.6
Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 45 TIKANSEACRDGLRAVMECRNVTHLLQQELTE-------AQKGFQD----VEAQAATCNH 93
+++A+ ++ L A R L ++EL E + QD +EA+ A
Sbjct: 1691 SLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE 1750
Query: 94 TVMALMASLDAEKAQGQK---KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+ +++A + +K + E+L E+ T Q + ++L R+N+ L ++ +
Sbjct: 1751 ELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHE 1810
Query: 151 KKYYPSSQDSSSAAAPQLLIVLL 173
+ S+ S+ AA + I L
Sbjct: 1811 MEGAVKSKFKSTIAALEAKIAQL 1833
>gi|92091583 smooth muscle myosin heavy chain 11 isoform SM2B [Homo
sapiens]
Length = 1945
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 53 CRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLD--------- 103
C DG RA E + H LQ E+ + E +A V +L + L
Sbjct: 1275 CSDGERARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQLQDTQELLQEE 1334
Query: 104 -AEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKK 152
+K K+ +LE E +L +L + + L R L+++++D K
Sbjct: 1335 TRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 1384
Score = 34.3 bits (77), Expect = 0.059
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 72 QELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQ---KKVEELEGEITTLNHKLQ 128
+++ + Q +++ Q A + A +A LD E AQ KK+ ELEG I+ L L
Sbjct: 1076 EQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLD 1135
Query: 129 DASA---EVERLRR----ENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVL 172
A + E+ +R E + L + D ++Q A Q + VL
Sbjct: 1136 SERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVL 1186
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 47 KANSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEK 106
KA E R V E R +ELTE + F+ +A +LD K
Sbjct: 1188 KALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA--------------NLDKNK 1233
Query: 107 AQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+K+ +L GE+ L Q+ + ++L + Q L + +D
Sbjct: 1234 QTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSD 1277
Score = 27.7 bits (60), Expect = 5.6
Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 45 TIKANSEACRDGLRAVMECRNVTHLLQQELTE-------AQKGFQD----VEAQAATCNH 93
+++A+ ++ L A R L ++EL E + QD +EA+ A
Sbjct: 1691 SLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE 1750
Query: 94 TVMALMASLDAEKAQGQK---KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+ +++A + +K + E+L E+ T Q + ++L R+N+ L ++ +
Sbjct: 1751 ELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHE 1810
Query: 151 KKYYPSSQDSSSAAAPQLLIVLL 173
+ S+ S+ AA + I L
Sbjct: 1811 MEGAVKSKFKSTIAALEAKIAQL 1833
>gi|13124875 smooth muscle myosin heavy chain 11 isoform SM2A [Homo
sapiens]
Length = 1938
Score = 38.9 bits (89), Expect = 0.002
Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 53 CRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLD--------- 103
C DG RA E + H LQ E+ + E +A V +L + L
Sbjct: 1268 CSDGERARAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLSSQLQDTQELLQEE 1327
Query: 104 -AEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKK 152
+K K+ +LE E +L +L + + L R L+++++D K
Sbjct: 1328 TRQKLNVSTKLRQLEEERNSLQDQLDEEMEAKQNLERHISTLNIQLSDSK 1377
Score = 34.3 bits (77), Expect = 0.059
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 72 QELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQ---KKVEELEGEITTLNHKLQ 128
+++ + Q +++ Q A + A +A LD E AQ KK+ ELEG I+ L L
Sbjct: 1069 EQIADLQAQIAELKMQLAKKEEELQAALARLDDEIAQKNNALKKIRELEGHISDLQEDLD 1128
Query: 129 DASA---EVERLRR----ENQVLSVRIADKKYYPSSQDSSSAAAPQLLIVL 172
A + E+ +R E + L + D ++Q A Q + VL
Sbjct: 1129 SERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQEVTVL 1179
Score = 29.3 bits (64), Expect = 1.9
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 47 KANSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEK 106
KA E R V E R +ELTE + F+ +A +LD K
Sbjct: 1181 KALDEETRSHEAQVQEMRQKHAQAVEELTEQLEQFKRAKA--------------NLDKNK 1226
Query: 107 AQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+K+ +L GE+ L Q+ + ++L + Q L + +D
Sbjct: 1227 QTLEKENADLAGELRVLGQAKQEVEHKKKKLEAQVQELQSKCSD 1270
Score = 27.7 bits (60), Expect = 5.6
Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 45 TIKANSEACRDGLRAVMECRNVTHLLQQELTE-------AQKGFQD----VEAQAATCNH 93
+++A+ ++ L A R L ++EL E + QD +EA+ A
Sbjct: 1684 SLEADLMQLQEDLAAAERARKQADLEKEELAEELASSLSGRNALQDEKRRLEARIAQLEE 1743
Query: 94 TVMALMASLDAEKAQGQK---KVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIAD 150
+ +++A + +K + E+L E+ T Q + ++L R+N+ L ++ +
Sbjct: 1744 ELEEEQGNMEAMSDRVRKATQQAEQLSNELATERSTAQKNESARQQLERQNKELRSKLHE 1803
Query: 151 KKYYPSSQDSSSAAAPQLLIVLL 173
+ S+ S+ AA + I L
Sbjct: 1804 MEGAVKSKFKSTIAALEAKIAQL 1826
>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
Length = 1979
Score = 38.1 bits (87), Expect = 0.004
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 102 LDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSV 146
L EK + KK+E+LE +I +N KL A + + LRRE + L+V
Sbjct: 297 LQIEKVESTKKMEQLEDKIKDINKKLSSAENDRDILRREQEQLNV 341
Score = 34.7 bits (78), Expect = 0.045
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 67 THLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHK 126
+ LLQQEL E +K Q+ +A T L S+ A +K+ E+ + EI L K
Sbjct: 1342 SELLQQELEELRKSLQEKDATIRTLQENNHRLSDSIAATSELERKEHEQTDSEIKQLKEK 1401
Query: 127 LQDASAEVERLRRENQVL 144
QD +++L +E +L
Sbjct: 1402 -QDV---LQKLLKEKDLL 1415
>gi|148762940 DVL-binding protein DAPLE [Homo sapiens]
Length = 2028
Score = 38.1 bits (87), Expect = 0.004
Identities = 35/115 (30%), Positives = 48/115 (41%), Gaps = 18/115 (15%)
Query: 49 NSEACRDGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCN----------HTVMAL 98
++ A RD L ++ E N L+ ELT ++ DV+ A T L
Sbjct: 307 SARAYRDELDSLREKANRVERLELELTRCKEKLHDVDFYKARMEELREDNIILIETKAML 366
Query: 99 MASLDAEKAQGQKKVEELEGEITTLNHKLQDASAE-------VERLRRENQVLSV 146
L A +A+G KV ELE E L KL D + +E L EN VL +
Sbjct: 367 EEQLTAARARGD-KVHELEKENLQLKSKLHDLELDRDTDKKRIEELLEENMVLEI 420
>gi|239745132 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 [Homo sapiens]
Length = 602
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 128
LL+ +LT+ ++ FQ V+ + C L E+A+ Q+++ ++ EI TL + Q
Sbjct: 218 LLKVQLTQLKESFQQVQLERDECAE-------HLKGERARWQQRMRKMSQEICTLKKEKQ 270
Query: 129 DASAEVERLRRENQVLSVRIAD 150
VE+L R L ++A+
Sbjct: 271 QDMRRVEKLERSLSKLKNQMAE 292
>gi|239745130 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 37.7 bits (86), Expect = 0.005
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 128
LL+ +LT+ ++ FQ V+ + C L E+A+ Q+++ ++ EI TL + Q
Sbjct: 219 LLKVQLTQLKESFQQVQLERDECAE-------HLKGERARWQQRMRKMSQEICTLKKEKQ 271
Query: 129 DASAEVERLRRENQVLSVRIAD 150
VE+L R L ++A+
Sbjct: 272 QDMRRVEKLERSLSKLKNQMAE 293
>gi|68299759 ecotropic viral integration site 5 [Homo sapiens]
Length = 810
Score = 37.0 bits (84), Expect = 0.009
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 111 KKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKKYYPSSQDSSSAAAPQL 168
KK+++LE E TT+ K + E++RLR EN++L RI + + S + + QL
Sbjct: 406 KKMKKLEKEYTTIKTKEMEEQVEIKRLRTENRLLKQRIETLEKHKCSSNYNEDFVLQL 463
>gi|56550047 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 2 [Homo sapiens]
Length = 1403
Score = 37.0 bits (84), Expect = 0.009
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 70 LQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKV-EELEGEITTLNHKLQ 128
L+ L + QK + E + +AL L +E A G ++ EEL+ ++ L K +
Sbjct: 482 LEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDLKVKYE 541
Query: 129 DASAEVERLRRE 140
ASAEV +LR +
Sbjct: 542 GASAEVGKLRNQ 553
>gi|59850762 uveal autoantigen with coiled-coil domains and ankyrin
repeats isoform 1 [Homo sapiens]
Length = 1416
Score = 37.0 bits (84), Expect = 0.009
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 70 LQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKV-EELEGEITTLNHKLQ 128
L+ L + QK + E + +AL L +E A G ++ EEL+ ++ L K +
Sbjct: 495 LEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDLKVKYE 554
Query: 129 DASAEVERLRRE 140
ASAEV +LR +
Sbjct: 555 GASAEVGKLRNQ 566
>gi|83415174 hypothetical protein LOC400818 [Homo sapiens]
Length = 942
Score = 35.8 bits (81), Expect = 0.020
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 66 VTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNH 125
+ H ++ELT+ ++ ++ + + N + AL+ + +K+QGQ E+L H
Sbjct: 369 LVHAQERELTQLREKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQH 428
Query: 126 KLQDASAEVERLRRENQVLSVRIADK 151
+Q S E + +N+ + V +A+K
Sbjct: 429 LVQKLSPEND--NDDNEDVQVEVAEK 452
Score = 31.6 bits (70), Expect = 0.38
Identities = 17/68 (25%), Positives = 34/68 (50%)
Query: 66 VTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNH 125
+ H ++ELT+ ++ ++ + + N + AL+ + +K+QGQ E+L H
Sbjct: 98 LVHSQERELTQLKEKLREGRDASRSLNEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQH 157
Query: 126 KLQDASAE 133
+Q S E
Sbjct: 158 LVQKLSPE 165
>gi|35038601 spindle assembly abnormal protein 6 [Homo sapiens]
Length = 657
Score = 35.8 bits (81), Expect = 0.020
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 9/103 (8%)
Query: 72 QELTEAQKGFQDVEAQAATCNHTVMALMASLDA-------EKAQGQKKVEELEGEITTLN 124
Q+ E QK +D+E H + ++ L+A K +G + EL+ +++ +
Sbjct: 229 QQQHEQQK--KDLEILHQQNIHQLQNRLSELEAANKDLTERKYKGDSTIRELKAKLSGVE 286
Query: 125 HKLQDASAEVERLRRENQVLSVRIADKKYYPSSQDSSSAAAPQ 167
+LQ EV LRREN L V +K+ + + + A Q
Sbjct: 287 EELQRTKQEVLSLRRENSTLDVECHEKEKHVNQLQTKVAVLEQ 329
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 35.4 bits (80), Expect = 0.027
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 70 LQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQ---KKVEELEGEITTLNHK 126
L ++ E Q +++ Q A + A +A ++ E AQ KK+ ELE +I+ L
Sbjct: 1060 LSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMALKKIRELESQISELQED 1119
Query: 127 LQDASAEVERLRRENQVLSVRIADKKYYPSSQDSSSAAAPQL 168
L+ A + ++ + L + K S+AA +L
Sbjct: 1120 LESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQEL 1161
Score = 29.3 bits (64), Expect = 1.9
Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 58 RAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKV---- 113
++V E L+Q++ E + +++E + + L +L A KAQ ++ +
Sbjct: 1518 KSVHELEKSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRD 1577
Query: 114 EELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKK 152
E+ E + L ++++ AE+E R++ S+ +A +K
Sbjct: 1578 EQSEEKKKQLVRQVREMEAELEDERKQR---SMAVAARK 1613
Score = 26.9 bits (58), Expect = 9.5
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 46 IKANSEACRDG--LRAVMECRNVTHLLQQELTEAQKGFQD-VEAQAATCNHTVMALMASL 102
++A +E C + LRA + + +QEL E + VE + C H L
Sbjct: 889 LQAETELCAEAEELRARLTAK------KQELEEICHDLEARVEEEEERCQH--------L 934
Query: 103 DAEKAQGQKKVEELEGEI---TTLNHKLQ----DASAEVERLRRENQVL 144
AEK + Q+ ++ELE ++ + KLQ A++++L E +L
Sbjct: 935 QAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQIIL 983
Score = 26.9 bits (58), Expect = 9.5
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 77 AQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVE- 135
A K +++E+Q + + + AS + + Q + EELE T L L +A+ E
Sbjct: 1102 ALKKIRELESQISELQEDLESERASRNKAEKQKRDLGEELEALKTELEDTLDSTAAQQEL 1161
Query: 136 RLRRENQV 143
R +RE +V
Sbjct: 1162 RSKREQEV 1169
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 35.4 bits (80), Expect = 0.027
Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 58 RAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQG---QKKVE 114
RA + L Q+ + + + Q ++ + + + AL A ++ E+A G QKK++
Sbjct: 1050 RAKRKLEGDLKLTQESIMDLENDKQQLDERLKKKDFELNALNARIEDEQALGSQLQKKLK 1109
Query: 115 ELEGEITTLNHKLQ---DASAEVERLR----RENQVLSVRIAD 150
EL+ I L +L+ A A+VE+LR RE + +S R+ +
Sbjct: 1110 ELQARIEELEEELEAERTARAKVEKLRSDLSRELEEISERLEE 1152
Score = 33.5 bits (75), Expect = 0.10
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 59 AVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNH----------TVMALMASLD-AEKA 107
AV ECRN ++ +T+A ++++ + T H T+ L LD AE+
Sbjct: 1744 AVQECRNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTIKDLQHRLDEAEQI 1803
Query: 108 Q---GQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKKY----YPSSQDS 160
G+K++++LE + L ++L E E+ R V +R ++++ Y + +D
Sbjct: 1804 ALKGGKKQLQKLEARVRELENEL-----EAEQKRNAESVKGMRKSERRIKELTYQTEEDR 1858
Query: 161 SSAAAPQLLIVLLGL 175
+ Q L+ L L
Sbjct: 1859 KNLLRLQDLVDKLQL 1873
Score = 30.8 bits (68), Expect = 0.66
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 9/89 (10%)
Query: 57 LRAVME-CRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEE 115
LRAV+E L +QEL E + Q + +Q N +++ +DA+ +Q Q +VEE
Sbjct: 1688 LRAVVEQTERSRKLAEQELIETSERVQLLHSQ----NTSLINQKKKMDADLSQLQTEVEE 1743
Query: 116 LEGEITTLNHK----LQDASAEVERLRRE 140
E K + DA+ E L++E
Sbjct: 1744 AVQECRNAEEKAKKAITDAAMMAEELKKE 1772
Score = 28.5 bits (62), Expect = 3.3
Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 45/149 (30%)
Query: 47 KANSEACR-------DGLRAVMECRNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALM 99
KANSE + D ++ E L Q L EA++ + V A+ ++ T L
Sbjct: 1363 KANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQ 1422
Query: 100 -----------------ASLD---------------------AEKAQGQKKVEELEGEIT 121
A+LD +E QK+ L E+
Sbjct: 1423 NEIEDLMVDVERSNAAAAALDKKQRNFDKILAEWKQKYEESQSELESSQKEARSLSTELF 1482
Query: 122 TLNHKLQDASAEVERLRRENQVLSVRIAD 150
L + +++ +E +REN+ L I+D
Sbjct: 1483 KLKNAYEESLEHLETFKRENKNLQEEISD 1511
>gi|157738615 coiled-coil alpha-helical rod protein 1 isoform 1
[Homo sapiens]
Length = 871
Score = 35.4 bits (80), Expect = 0.027
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 31/155 (20%)
Query: 54 RDGLRAVMEC-----RNVTHLL---QQELTEAQKGFQDVEAQ-AATCN-------HTVMA 97
RD L A E +++TH+L ++ELT + +E + C V A
Sbjct: 373 RDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFA 432
Query: 98 LMASLDAEKAQGQKKVEELEGEITTLNHK--------------LQDASAEVERLRRENQV 143
LM L A++ + V++L+G++ +L K LQD +AEVE R +
Sbjct: 433 LMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKG 492
Query: 144 LSVRIA-DKKYYPSSQDSSSAAAPQLLIVLLGLSA 177
L + ++ ++ Q +++A QL +V+ +S+
Sbjct: 493 LQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSS 527
>gi|157738613 coiled-coil alpha-helical rod protein 1 isoform 2
[Homo sapiens]
Length = 835
Score = 35.4 bits (80), Expect = 0.027
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 31/155 (20%)
Query: 54 RDGLRAVMEC-----RNVTHLL---QQELTEAQKGFQDVEAQ-AATCN-------HTVMA 97
RD L A E +++TH+L ++ELT + +E + C V A
Sbjct: 337 RDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFA 396
Query: 98 LMASLDAEKAQGQKKVEELEGEITTLNHK--------------LQDASAEVERLRRENQV 143
LM L A++ + V++L+G++ +L K LQD +AEVE R +
Sbjct: 397 LMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKG 456
Query: 144 LSVRIA-DKKYYPSSQDSSSAAAPQLLIVLLGLSA 177
L + ++ ++ Q +++A QL +V+ +S+
Sbjct: 457 LQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSS 491
>gi|157738611 coiled-coil alpha-helical rod protein 1 isoform 3
[Homo sapiens]
Length = 782
Score = 35.4 bits (80), Expect = 0.027
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 31/155 (20%)
Query: 54 RDGLRAVMEC-----RNVTHLL---QQELTEAQKGFQDVEAQ-AATCN-------HTVMA 97
RD L A E +++TH+L ++ELT + +E + C V A
Sbjct: 284 RDSLHATAELLQVRVQSLTHILALQEEELTRKVQPSDSLEPEFTRKCQSLLNRWREKVFA 343
Query: 98 LMASLDAEKAQGQKKVEELEGEITTLNHK--------------LQDASAEVERLRRENQV 143
LM L A++ + V++L+G++ +L K LQD +AEVE R +
Sbjct: 344 LMVQLKAQELEHSDSVKQLKGQVASLQEKVTSQSQEQAILQRSLQDKAAEVEVERMGAKG 403
Query: 144 LSVRIA-DKKYYPSSQDSSSAAAPQLLIVLLGLSA 177
L + ++ ++ Q +++A QL +V+ +S+
Sbjct: 404 LQLELSRAQEARRRWQQQTASAEEQLRLVVNAVSS 438
>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
Length = 3628
Score = 35.0 bits (79), Expect = 0.035
Identities = 20/86 (23%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 66 VTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNH 125
+ H ++ELT+ ++ ++ + + N + AL+ + +K+QGQ E+L H
Sbjct: 369 LVHAQERELTQLKEKLREGRDASRSLNEHLQALLTPYEPDKSQGQDLQEQLAEGCRLAQH 428
Query: 126 KLQDASAEVERLRRENQVLSVRIADK 151
+Q S E + +++ + V +A+K
Sbjct: 429 LVQKLSPEND--NDDDEDVQVEVAEK 452
Score = 29.3 bits (64), Expect = 1.9
Identities = 20/86 (23%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 66 VTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNH 125
+ H ++ELT+ ++ ++ + + + AL+ + +K+QGQ E+L H
Sbjct: 98 LVHSQERELTQLREKLREGRDASRSLYEHLQALLTPDEPDKSQGQDLQEQLAEGCRLAQH 157
Query: 126 KLQDASAEVERLRRENQVLSVRIADK 151
+Q S E + E++ + V A+K
Sbjct: 158 LVQKLSPEND--EDEDEDVQVEEAEK 181
>gi|223671856 coiled-coil domain containing 85C [Homo sapiens]
Length = 419
Score = 34.7 bits (78), Expect = 0.045
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 12/89 (13%)
Query: 64 RNVTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELE------ 117
R+V LQQ L E +G +DV + N + L LD ++ +G+K E +
Sbjct: 54 RDVNRRLQQHLLEI-RGLKDVNQRLQDDNQELRELCCFLDDDRQKGRKLAREWQRFGRHA 112
Query: 118 -----GEITTLNHKLQDASAEVERLRREN 141
E+ KL++ A E L REN
Sbjct: 113 AGAVWHEVARSQQKLRELEARQEALLREN 141
>gi|169208036 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 601
Score = 34.7 bits (78), Expect = 0.045
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 128
LL+ +LT+ ++ FQ V+ + + L E+A+ Q+++ ++ EI TL + Q
Sbjct: 218 LLKVQLTQLKESFQQVQLERDEYSE-------HLKGERARWQQRMRKMSQEICTLKKEKQ 270
Query: 129 DASAEVERLRRENQVLSVRIAD 150
VE+L R L ++A+
Sbjct: 271 QDMRRVEKLERSLSKLKNQMAE 292
>gi|239745147 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 630
Score = 34.7 bits (78), Expect = 0.045
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 128
LL+ +LT+ ++ FQ V+ + + L E+A+ Q+++ ++ EI TL + Q
Sbjct: 219 LLKVQLTQLKESFQQVQLERDEYSE-------HLKGERARWQQRMRKMSQEICTLKKEKQ 271
Query: 129 DASAEVERLRRENQVLSVRIAD 150
VE+L R L ++A+
Sbjct: 272 QDMRRVEKLERSLSKLKNQMAE 293
>gi|169208517 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 2 [Homo sapiens]
Length = 602
Score = 34.7 bits (78), Expect = 0.045
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 128
LL+ +LT+ ++ FQ V+ + + L E+A+ Q+++ ++ EI TL + Q
Sbjct: 218 LLKVQLTQLKESFQQVQLERDEYSE-------HLKGERARWQQRMRKMSQEICTLKKEKQ 270
Query: 129 DASAEVERLRRENQVLSVRIAD 150
VE+L R L ++A+
Sbjct: 271 QDMRRVEKLERSLSKLKNQMAE 292
>gi|239745099 PREDICTED: similar to Golgin subfamily A member 8-like
protein 1 isoform 1 [Homo sapiens]
Length = 632
Score = 34.7 bits (78), Expect = 0.045
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 69 LLQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQ 128
LL+ +LT+ ++ FQ V+ + + L E+A+ Q+++ ++ EI TL + Q
Sbjct: 219 LLKVQLTQLKESFQQVQLERDEYSE-------HLKGERARWQQRMRKMSQEICTLKKEKQ 271
Query: 129 DASAEVERLRRENQVLSVRIAD 150
VE+L R L ++A+
Sbjct: 272 QDMRRVEKLERSLSKLKNQMAE 293
>gi|239741297 PREDICTED: neuroblastoma breakpoint family, member 9
[Homo sapiens]
Length = 299
Score = 34.7 bits (78), Expect = 0.045
Identities = 26/115 (22%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 46 IKANSEACRDGLRAVMECRN---VTHLLQQELTEAQKGFQDVEAQAATCNHTVMALMASL 102
++ E + L+ E R + H ++ELT+ ++ ++ + + N + AL+
Sbjct: 75 LQFKEEKLAEQLKQAEELRQYKVLVHSQERELTQLREKLREGRDASRSLNEHLQALLTPD 134
Query: 103 DAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVRIADKKYYPSS 157
+ +K+QGQ E+L H +Q S E + +++ + V +A+K SS
Sbjct: 135 EPDKSQGQDLQEQLAEGCRLAQHLVQKLSPEND--NDDDEDVQVEVAEKVQKSSS 187
>gi|167555110 kinesin family member C1 [Homo sapiens]
Length = 673
Score = 34.7 bits (78), Expect = 0.045
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 63 CRNVTHLLQQELTEAQKGFQDVEAQA---ATCNHTVMALMASLDAEKAQGQKKVEELEGE 119
CR T L QE + Q +D + Q T T+ +A + A+ QGQ++++ L
Sbjct: 153 CRERTQTLDQENQQLQDQLRDAQQQVKALGTERTTLEGHLAKVQAQAEQGQQELKNLRAC 212
Query: 120 ITTLNHKLQDASAEVERLRRE 140
+ L +L V+ L+++
Sbjct: 213 VLELEERLSTQEGLVQELQKK 233
Score = 28.1 bits (61), Expect = 4.3
Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 71 QQELTEAQKGFQDVEAQAATCNHTVMALM---ASLDAEKAQGQKKVEELEGEITTLNHKL 127
QQEL + ++E + +T V L L E+ ++EE E + T L
Sbjct: 203 QQELKNLRACVLELEERLSTQEGLVQELQKKQVELQEERRGLMSQLEEKERRLQTSEAAL 262
Query: 128 QDASAEVERLRRENQVLSVRIADKK 152
+ AEV LR+E + + +++
Sbjct: 263 SSSQAEVASLRQETVAQAALLTERE 287
>gi|29294627 PTPRF interacting protein binding protein 1 isoform 1
[Homo sapiens]
Length = 1005
Score = 34.7 bits (78), Expect = 0.045
Identities = 16/71 (22%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 70 LQQELTEAQKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNHKLQD 129
++++ + + F+D E N + + + +D+E+ Q +KK++ + E+ +L +L++
Sbjct: 186 VEKDRLDYEDKFRDTEGLIQEINDLRLKV-SEMDSERLQYEKKLKSTKDELASLKEQLEE 244
Query: 130 ASAEVERLRRE 140
+EV+RL+ +
Sbjct: 245 KESEVKRLQEK 255
>gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo
sapiens]
Length = 316
Score = 34.7 bits (78), Expect = 0.045
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 20 CKLLL--GIGILVLLIIVILGVPLIIFTIKANSEACRDGLRAVMECRNVTHLLQQELTEA 77
C LLL G+G+L+L+II ++G NS+ RD + + N T E+
Sbjct: 39 CHLLLSLGLGLLLLVIICVVGF--------QNSKFQRDLVTLRTDFSNFTSNTVAEI--- 87
Query: 78 QKGFQDVEAQAATCNHTVMALMASLDAEKAQGQKKVEELEGEITTLNH 125
Q + +Q ++ T+ +L A ++ K + Q V EL+ T H
Sbjct: 88 ----QALTSQGSSLEETIASLKAEVEGFKQERQAGVSELQEHTTQKAH 131
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,662,158
Number of Sequences: 37866
Number of extensions: 204638
Number of successful extensions: 2172
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 144
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 1565
Number of HSP's gapped (non-prelim): 763
length of query: 180
length of database: 18,247,518
effective HSP length: 96
effective length of query: 84
effective length of database: 14,612,382
effective search space: 1227440088
effective search space used: 1227440088
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.