Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 47174861
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47174861 peter pan homolog [Homo sapiens]
(473 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47174861 peter pan homolog [Homo sapiens] 938 0.0
gi|99028871 PPAN-P2RY11 protein [Homo sapiens] 845 0.0
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 43 5e-04
gi|7661952 squamous cell carcinoma antigen recognized by T cells... 43 7e-04
gi|157676331 hyaluronan binding protein 4 [Homo sapiens] 42 0.001
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 42 0.002
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 41 0.002
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 41 0.003
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 41 0.003
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 41 0.003
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 41 0.003
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 41 0.003
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 41 0.003
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 41 0.003
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 41 0.003
gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform... 40 0.004
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 40 0.004
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 40 0.004
gi|52426743 cisplatin resistance-associated overexpressed protei... 40 0.004
gi|19923485 cisplatin resistance-associated overexpressed protei... 40 0.004
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 40 0.004
gi|22758136 MAP7 domain containing 2 [Homo sapiens] 40 0.004
gi|221219020 NYD-SP11 protein [Homo sapiens] 40 0.005
gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo sapi... 40 0.005
gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 ... 40 0.005
gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens] 40 0.005
gi|213385278 TNF receptor-associated factor 3 interacting protei... 39 0.008
gi|20070262 TNF receptor-associated factor 3 interacting protein... 39 0.008
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 39 0.008
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 39 0.013
>gi|47174861 peter pan homolog [Homo sapiens]
Length = 473
Score = 938 bits (2424), Expect = 0.0
Identities = 473/473 (100%), Positives = 473/473 (100%)
Query: 1 MGQSGRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTAS 60
MGQSGRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTAS
Sbjct: 1 MGQSGRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTAS 60
Query: 61 RLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRD 120
RLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRD
Sbjct: 61 RLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRD 120
Query: 121 VVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRC 180
VVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRC
Sbjct: 121 VVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRC 180
Query: 181 LLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSES 240
LLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSES
Sbjct: 181 LLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSES 240
Query: 241 EAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSF 300
EAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSF
Sbjct: 241 EAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSF 300
Query: 301 VSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSD 360
VSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSD
Sbjct: 301 VSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSD 360
Query: 361 EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRK 420
EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRK
Sbjct: 361 EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRK 420
Query: 421 RWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKRVA 473
RWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKRVA
Sbjct: 421 RWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKRVA 473
>gi|99028871 PPAN-P2RY11 protein [Homo sapiens]
Length = 794
Score = 845 bits (2182), Expect = 0.0
Identities = 433/448 (96%), Positives = 434/448 (96%), Gaps = 2/448 (0%)
Query: 1 MGQSGRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTAS 60
MGQSGRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTAS
Sbjct: 1 MGQSGRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTAS 60
Query: 61 RLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRD 120
RLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRD
Sbjct: 61 RLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRD 120
Query: 121 VVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRC 180
VVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRC
Sbjct: 121 VVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRC 180
Query: 181 LLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSES 240
LLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSES
Sbjct: 181 LLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSES 240
Query: 241 EAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSF 300
EAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSF
Sbjct: 241 EAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSF 300
Query: 301 VSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSD 360
VSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSD
Sbjct: 301 VSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSD 360
Query: 361 EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRK 420
EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRK
Sbjct: 361 EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRK 420
Query: 421 RWEMDRGRGRLCDQKF-PKTKDKSQGAQ 447
RWEMDRG + C F DK G Q
Sbjct: 421 RWEMDRG-AKSCPANFLAAADDKLSGFQ 447
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 43.1 bits (100), Expect = 5e-04
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 13/136 (9%)
Query: 337 QEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGE 396
+E++E K L + +G S S S + S D + D D +Y
Sbjct: 1590 KEKKETKEKSHLSTSESGELGSSLSSESTCGSDSDSESTSRTDQDYVDGDHDY------- 1642
Query: 397 APSEDLFPEAKQKR-LAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQAR-RGPRG 454
F + + KR L K G ++ W+ GR ++ + +G R RG RG
Sbjct: 1643 ----SKFIQTRPKRKLRKQHGNGKRNWKTRGTGGRGRWGRWGRWSRGGRGRGGRGRGSRG 1698
Query: 455 ASRDGGRGRGRGRPGK 470
G RGRGRGR G+
Sbjct: 1699 RGGGGTRGRGRGRGGR 1714
>gi|7661952 squamous cell carcinoma antigen recognized by T cells 3
[Homo sapiens]
Length = 963
Score = 42.7 bits (99), Expect = 7e-04
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 30/170 (17%)
Query: 264 RAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTEEELQAI----LEAKEKKL 319
+A AV+ T P +++ E + V KTE L + ++A EK+
Sbjct: 529 KALHRAVQCTSDYPEHVCEVLLTMERTEGSLEDWDIAVQKTETRLARVNEQRMKAAEKEA 588
Query: 320 RLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDD 379
L Q + + Q + + E++ +KK + G +K DE+ E G+D+
Sbjct: 589 ALVQQEEEKAEQRKRARAEKKALKKKKKIRGPEKRGADEDDEK-----------EWGDDE 637
Query: 380 DEQ---------------EDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKS 414
+EQ E ++E G+ + D+ P +KQK A S
Sbjct: 638 EEQPSKRRRVENSIPAAGETQNVEVAAGPAGKCAAVDVEPPSKQKEKAAS 687
>gi|157676331 hyaluronan binding protein 4 [Homo sapiens]
Length = 413
Score = 42.4 bits (98), Expect = 0.001
Identities = 46/197 (23%), Positives = 75/197 (38%), Gaps = 22/197 (11%)
Query: 293 GKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRK------- 345
G M SF +L+ + + + + ++ Q +QRK+ A
Sbjct: 13 GAAMQESFGCVVANRFHQLLDDESDPFDILREAERRRQQQLQRKRRDEAAAAAGAGPRGG 72
Query: 346 KSLEGMKKARVGG-----SDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSE 400
+S G R G S +E +P+ A Q + + ++
Sbjct: 73 RSPAGASGHRAGAGGRRESQKERKSLPAPVAQRPDSPGGGLQAPGQKRTPRRGEQQGWND 132
Query: 401 DLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTK-----DKSQGAQARRGPRGA 455
PE +R + R+ + +E +R + +KFP K D+ + + R GPRG
Sbjct: 133 SRGPEGMLERAERRSYREYRPYETER-QADFTAEKFPDEKPGDRFDRDRPLRGRGGPRG- 190
Query: 456 SRDGGRGRGRGRPGKRV 472
G RGRGRG PG RV
Sbjct: 191 ---GMRGRGRGGPGNRV 204
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 41.6 bits (96), Expect = 0.002
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 336 KQEQREAHRKKSLEGMKKARVGGSDEEAS--GIPSRTASLELGEDDDEQEDDDIEYFCQA 393
K+ +R + R GG ++A+ G+ SR G+ Q+ +
Sbjct: 323 KKPRRRGQKATKAAAAGTKRGGGGQQKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRG 382
Query: 394 VGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQA--RRG 451
G+ EAK++ GRK+ RW+ R R QK P K + G++ RRG
Sbjct: 383 GGDKKG---LREAKRR----GDGRKKPRWQNPRRRA----QKAPAAKPRGGGSKKPRRRG 431
Query: 452 PRGASRDGGRGRGRG--RPGKR 471
P+ A GG+ R G +P +R
Sbjct: 432 PKAAKSRGGKSRSGGGKKPRRR 453
Score = 29.6 bits (65), Expect = 6.2
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 13/140 (9%)
Query: 335 RKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAV 394
R ++ R +K + G KK R A+G +R A + +
Sbjct: 119 RGRKPRRRGQKAAATGSKKPRWRAQKSAAAGSKNRGAGAQKAAAAAGVKSQG-------- 170
Query: 395 GEAPSEDLFPEAKQKRLAKSP---GRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRG 451
GE P + AK R K P G K + E +GR R +F KT+ + R
Sbjct: 171 GEKPQKAAAAGAKS-RSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPK 229
Query: 452 PRGASRDGGRGRGRGRPGKR 471
P RG G+ +P K+
Sbjct: 230 PAAGGAKSRRGGGK-KPQKQ 248
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 41.2 bits (95), Expect = 0.002
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 315 KEKKLRLKAQRQAQQAQNVQRKQE-QREAHRKKSLEGMK-KARVGGSDEEASGIPSRTAS 372
+E++ K QR+ ++ + +RK+E QRE R++ + + R + E R
Sbjct: 279 RERQTDRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDRE 338
Query: 373 LELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLC 432
E Q + D E Q E + +++ + R+R+ E DR R R
Sbjct: 339 KERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQK 398
Query: 433 DQKFPKTKDK-SQGAQARRGPRGASRDGGRGRGRGR 467
+++ KD+ Q ++ R R+ RGR RGR
Sbjct: 399 ERERQTEKDRDGQRETEKQREREKDRESERGRERGR 434
Score = 36.2 bits (82), Expect = 0.066
Identities = 42/174 (24%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 305 EEELQAILEAKEKKLRLKAQRQAQQAQNVQR-------KQEQREAHRKKSLEGMKKARVG 357
E E Q E KE++ + +RQ Q +N Q+ +QE+RE R++ E + R
Sbjct: 148 ERERQRDAE-KERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHS 206
Query: 358 GSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGR 417
E R E + + + D E Q E E +A+++R ++
Sbjct: 207 ERGRE------RERERETETETERKRQTDRERDRQRKTERERE---KQAERERASERETE 257
Query: 418 KRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKR 471
+ K E +R R R D++ + + ++ + RR R + R R R R +R
Sbjct: 258 RDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERER 311
Score = 33.9 bits (76), Expect = 0.33
Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 25/172 (14%)
Query: 315 KEKKLRLKAQRQAQQAQNVQRKQEQ-REAHR-------KKSLEGMKKARVGGSDEEAS-- 364
KE++ + + R Q+ QR++E+ RE+ R ++ +G ++ R +D +A
Sbjct: 398 KERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQ 457
Query: 365 --------GIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPG 416
P RTA + + D + I + + FP + + ++
Sbjct: 458 RKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKSSPEDPKAASTRFPWGRPAKASRGRV 517
Query: 417 RKRKRWEM-------DRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGR 461
R+RWE G GR F SQ GPR DG R
Sbjct: 518 AGRRRWEPRLGEKRGQGGEGRRPSGGFGTENPLSQAPSVFPGPRYTPGDGKR 569
Score = 32.0 bits (71), Expect = 1.3
Identities = 30/163 (18%), Positives = 70/163 (42%), Gaps = 12/163 (7%)
Query: 315 KEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLE 374
KE++ R + ++ ++ + ++ +++ HRK+ + R ++E R +
Sbjct: 60 KERERRREKRQTERETDRKRERRREKDRHRKRD---RHRERQRDREKERERQTDRERDRQ 116
Query: 375 LGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQ 434
++ + Q++ + E + GE D + +++R + K + + DR R R ++
Sbjct: 117 REKERNRQKERERE--TEREGER-GRDRQTDGQRERERQRDAEKERERQTDRERQRQTER 173
Query: 435 KFPKTKDKSQGAQAR------RGPRGASRDGGRGRGRGRPGKR 471
K +++ + Q R R + D RGR R +R
Sbjct: 174 NRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERER 216
Score = 29.6 bits (65), Expect = 6.2
Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 20/171 (11%)
Query: 303 KTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEE 362
+TE E + + ++ R + + ++ Q + + +RE R K E +
Sbjct: 217 ETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERER---------- 266
Query: 363 ASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRW 422
R + + + E++ D Q E E +Q+ + R RKR
Sbjct: 267 -----DRDRDRDRRQKERERQTDRKR---QRRTERDRETERKRERQRERERERERNRKR- 317
Query: 423 EMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKRVA 473
E +R R R +++ +D+ + + +R R D R R GR G+R A
Sbjct: 318 ERERERERERERQRETERDREKERERKR-KRQTEMDRERNRQTGREGRRQA 367
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2442 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2499
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2500 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2558
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2559 QHEAEEGVRRKQEELQQLEQQRRQQEE 2585
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1539 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1598
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1599 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1658
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1659 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1708
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1584 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1643
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1644 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1693
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1694 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1730
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2189 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2248
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2249 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2306
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2307 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2363
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2364 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2423
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2424 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2463
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1353 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1404
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1405 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1464
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1465 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1524
Query: 360 DEEA 363
E A
Sbjct: 1525 AEAA 1528
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2446 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2503
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2504 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2562
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2563 QHEAEEGVRRKQEELQQLEQQRRQQEE 2589
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1543 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1602
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1603 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1662
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1663 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1712
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1588 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1647
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1648 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1697
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1698 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1734
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2193 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2252
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2253 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2310
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2311 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2367
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2368 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2427
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2428 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2467
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1357 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1408
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1409 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1468
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1469 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1528
Query: 360 DEEA 363
E A
Sbjct: 1529 AEAA 1532
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2442 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2499
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2500 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2558
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2559 QHEAEEGVRRKQEELQQLEQQRRQQEE 2585
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1539 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1598
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1599 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1658
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1659 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1708
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1584 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1643
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1644 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1693
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1694 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1730
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2189 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2248
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2249 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2306
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2307 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2363
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2364 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2423
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2424 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2463
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1353 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1404
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1405 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1464
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1465 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1524
Query: 360 DEEA 363
E A
Sbjct: 1525 AEAA 1528
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2410 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2467
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2468 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2526
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2527 QHEAEEGVRRKQEELQQLEQQRRQQEE 2553
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1507 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1566
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1567 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1626
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1627 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1676
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1552 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1611
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1612 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1661
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1662 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1698
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2157 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2216
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2217 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2274
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2275 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2331
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2332 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2391
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2392 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2431
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1321 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1372
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1373 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1432
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1433 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1492
Query: 360 DEEA 363
E A
Sbjct: 1493 AEAA 1496
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2579 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2636
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2637 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2695
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2696 QHEAEEGVRRKQEELQQLEQQRRQQEE 2722
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1676 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1735
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1736 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1795
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1796 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1845
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1721 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1780
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1781 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1830
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1831 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1867
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2326 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2385
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2386 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2443
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2444 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2500
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2501 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2560
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2561 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2600
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1490 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1541
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1542 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1601
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1602 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1661
Query: 360 DEEA 363
E A
Sbjct: 1662 AEAA 1665
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2420 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2477
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2478 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2536
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2537 QHEAEEGVRRKQEELQQLEQQRRQQEE 2563
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1517 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1576
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1577 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1636
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1637 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1686
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1562 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1621
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1622 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1671
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1672 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1708
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2167 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2226
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2227 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2284
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2285 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2341
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2342 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2401
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2402 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2441
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1331 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1382
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1383 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1442
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1443 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1502
Query: 360 DEEA 363
E A
Sbjct: 1503 AEAA 1506
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2428 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2485
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2486 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2544
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2545 QHEAEEGVRRKQEELQQLEQQRRQQEE 2571
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1525 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1584
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1585 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1644
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1645 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1694
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1570 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1629
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1630 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1679
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1680 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1716
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2175 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2234
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2235 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2292
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2293 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2349
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2350 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2409
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2410 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2449
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1339 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1390
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1391 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1450
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1451 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1510
Query: 360 DEEA 363
E A
Sbjct: 1511 AEAA 1514
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 40.8 bits (94), Expect = 0.003
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 247 DHNITELPQAVAG--RGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKT 304
DH+ L +A+A R + QQ A L M Q ++ ++ + E + + SF+S+
Sbjct: 2469 DHDAERLREAIAELEREKEKLQQEAKLLQLKSEEM--QTVQQEQLLQETQALQQSFLSEK 2526
Query: 305 EEELQ--AILEAKEKKLRLKAQRQAQQAQNV----QRKQEQREAHRKKSLEGMKKARVGG 358
+ LQ +E ++ KL Q + +AQ + QR+Q+Q E R++ + M++AR
Sbjct: 2527 DSLLQRERFIEQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEAR-RR 2585
Query: 359 SDEEASGIPSRTASLELGEDDDEQEDD 385
E G+ + L+ E Q+++
Sbjct: 2586 QHEAEEGVRRKQEELQQLEQQRRQQEE 2612
Score = 31.6 bits (70), Expect = 1.6
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 25/170 (14%)
Query: 306 EELQAILEAKEKKLR---LKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS--- 359
EEL+ E E++LR ++ RQ Q A ++ + E K++ K A++ S
Sbjct: 1566 EELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAELQSKRASFAEKTAQLERSLQE 1625
Query: 360 --------DEEASGIPSRTASLELGEDDDEQE--------DDDIEYFCQAVGEAPSEDL- 402
EEA + A E ++ E+E ++ + QA A + L
Sbjct: 1626 EHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALRLRLQAEEVAQQKSLA 1685
Query: 403 -FPEAKQKRLAKSPGRKRKRWEMDRGRGR-LCDQKFPKTKDKSQGAQARR 450
KQK A+ R+R + E R R L +Q+ K + ++G +R
Sbjct: 1686 QAEAEKQKEEAEREARRRGKAEEQAVRQRELAEQELEKQRQLAEGTAQQR 1735
Score = 31.6 bits (70), Expect = 1.6
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 299 SFVSKTEEELQAILE--AKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKK-SLEGMKKAR 355
SF KT + +++ E +LR +A+R+AQQ +R +E+ E ++ L+ + R
Sbjct: 1611 SFAEKTAQLERSLQEEHVAVAQLREEAERRAQQQAEAERAREEAERELERWQLKANEALR 1670
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE + S L + + E++ ++ E + G+A + +Q+ LA+
Sbjct: 1671 LRLQAEEVAQQKS------LAQAEAEKQKEEAEREARRRGKAEEQ----AVRQRELAEQE 1720
Query: 416 GRKRKRWEMDRGRGRL-CDQKFPKTK-DKSQGAQARR 450
K+++ + RL +Q+ + + + QG Q R+
Sbjct: 1721 LEKQRQLAEGTAQQRLAAEQELIRLRAETEQGEQQRQ 1757
Score = 31.2 bits (69), Expect = 2.1
Identities = 52/280 (18%), Positives = 110/280 (39%), Gaps = 16/280 (5%)
Query: 176 TIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGA 235
T R L + + LD +K A+R ++ +E F +++++S+L A
Sbjct: 2216 TTLRLQLEETDHQKNLLDEELQRLKAEATEAARQRSQVEEELFSVRVQMEELSKLKARIE 2275
Query: 236 GLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKV 295
+ + D D N Q A + A+++A RL+ +E + + +
Sbjct: 2276 AENRALILRDKD-NTQRFLQEEAEKMKQVAEEAA-RLSVAAQEAARLRQLAEEDLAQQRA 2333
Query: 296 MFHSFVSKTEEELQAILEAKEKKLRLKAQRQA-----QQAQNVQRKQEQREAHRKKSLEG 350
+ + +E++QA+ EA K + +Q +QA+ +Q +EQ + +G
Sbjct: 2334 LAEKML---KEKMQAVQEATRLKAEAELLQQQKELAQEQARRLQEDKEQMAQQLAEETQG 2390
Query: 351 MKKA------RVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
++ R EA + R A + + E++ + +GE
Sbjct: 2391 FQRTLEAERQRQLEMSAEAERLKLRVAEMSRAQARAEEDAQRFRKQAEEIGEKLHRTELA 2450
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQ 444
++ L ++ +R++ + D R R + + K+K Q
Sbjct: 2451 TQEKVTLVQTLEIQRQQSDHDAERLREAIAELEREKEKLQ 2490
Score = 30.0 bits (66), Expect = 4.8
Identities = 43/184 (23%), Positives = 72/184 (39%), Gaps = 43/184 (23%)
Query: 215 QEKFPNMSRLQDISELLATGAGLSES--EAEPDGDHNITELPQAVAGRGNMRAQQSAVRL 272
Q++ RL ++ L L+E+ +A+ + EL Q R Q+ VR
Sbjct: 1380 QQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQ--------RMQEEVVRR 1431
Query: 273 TEIGPRMTLQLIKVQEGVGEGKVMFHSFVS--------------KTEEELQAI---LEAK 315
E Q +QE + + + + + + EEE++ + LEA
Sbjct: 1432 EEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1491
Query: 316 EKK----------LRLKAQ------RQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGS 359
E++ LR +A+ RQAQ+ R+Q Q E+ RK+ E +RV
Sbjct: 1492 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRVKAE 1551
Query: 360 DEEA 363
E A
Sbjct: 1552 AEAA 1555
>gi|10947135 ATP-binding cassette, sub-family F, member 1 isoform b
[Homo sapiens]
Length = 807
Score = 40.4 bits (93), Expect = 0.004
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 34/169 (20%)
Query: 286 VQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRK 345
V++G + K+ F E+ QA E EK L+ K Q+Q QQ Q ++K++ R+ RK
Sbjct: 28 VKKGKKDKKIKKTFFEELAVEDKQAGEE--EKVLKEKEQQQQQQQQQQKKKRDTRKGRRK 85
Query: 346 KS----------LEGMKKARVGGSDEE--------ASGIPSRTASL--ELGEDDDEQEDD 385
K +E +KK V SDEE G ++ ++ L +D E+E++
Sbjct: 86 KDVDDDGEEKELMERLKKLSVPTSDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEE 145
Query: 386 DIEYFCQAVGEAPSEDLFPEAKQKRLAKS----PGRKRKRWEMDRGRGR 430
+ ++ P + PE + A S P K K+ + ++ +G+
Sbjct: 146 EEKH--------PPKPAKPEKNRINKAVSEEQQPALKGKKGKEEKSKGK 186
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 40.4 bits (93), Expect = 0.004
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 34/169 (20%)
Query: 286 VQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRK 345
V++G + K+ F E+ QA E EK L+ K Q+Q QQ Q ++K++ R+ RK
Sbjct: 28 VKKGKKDKKIKKTFFEELAVEDKQAGEE--EKVLKEKEQQQQQQQQQQKKKRDTRKGRRK 85
Query: 346 KS----------LEGMKKARVGGSDEE--------ASGIPSRTASL--ELGEDDDEQEDD 385
K +E +KK V SDEE G ++ ++ L +D E+E++
Sbjct: 86 KDVDDDGEEKELMERLKKLSVPTSDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEE 145
Query: 386 DIEYFCQAVGEAPSEDLFPEAKQKRLAKS----PGRKRKRWEMDRGRGR 430
+ ++ P + PE + A S P K K+ + ++ +G+
Sbjct: 146 EEKH--------PPKPAKPEKNRINKAVSEEQQPALKGKKGKEEKSKGK 186
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
VGG + E PS ++ + GED+DE+EDD+ E + E E+ + L S
Sbjct: 74 VGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEE----ESSAESLVGSS 129
Query: 416 GRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRG 462
G G D +G + +GPRG+ GG G
Sbjct: 130 GGSSSDETRSLSPGAASSSS--GDGDGKEGLEEPKGPRGSQGGGGGG 174
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 40.4 bits (93), Expect = 0.004
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 57/264 (21%)
Query: 204 VGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPDGDHNITELPQAVAGRGNM 263
V ++GM KL+++ L++ ELL + ES A + + E+ A G+
Sbjct: 152 VEEAQGMMKLVEQ-------LKEERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDA 204
Query: 264 RAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKA 323
++ R+ L+ Q +G K+ + V + +E+L+ E ++ RLK
Sbjct: 205 QS------------RVDDHLMGKQH-MGYAKIK--ATVEELKEKLRKRTEEPDRDERLKK 249
Query: 324 QRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQE 383
++Q ++ + +R++E+ E RK+ E ++ + D E SR+ S D
Sbjct: 250 EKQEREEREKEREREREERERKRRREEEEREKERARDRERRK-RSRSRSRHSSRTSD--- 305
Query: 384 DDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKS 443
+R ++S KR R +R R R D++ ++ D+S
Sbjct: 306 -------------------------RRCSRSRDHKRSR-SRERRRSRSRDRRRSRSHDRS 339
Query: 444 QGAQARRGPRGASRDGGRGRGRGR 467
+ R R SRD R + R R
Sbjct: 340 E-----RKHRSRSRDRRRSKSRDR 358
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 40.4 bits (93), Expect = 0.004
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 57/264 (21%)
Query: 204 VGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPDGDHNITELPQAVAGRGNM 263
V ++GM KL+++ L++ ELL + ES A + + E+ A G+
Sbjct: 152 VEEAQGMMKLVEQ-------LKEERELLRSTTSTIESFAAQEKQMEVCEVCGAFLIVGDA 204
Query: 264 RAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKA 323
++ R+ L+ Q +G K+ + V + +E+L+ E ++ RLK
Sbjct: 205 QS------------RVDDHLMGKQH-MGYAKIK--ATVEELKEKLRKRTEEPDRDERLKK 249
Query: 324 QRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQE 383
++Q ++ + +R++E+ E RK+ E ++ + D E SR+ S D
Sbjct: 250 EKQEREEREKEREREREERERKRRREEEEREKERARDRERRK-RSRSRSRHSSRTSD--- 305
Query: 384 DDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKS 443
+R ++S KR R +R R R D++ ++ D+S
Sbjct: 306 -------------------------RRCSRSRDHKRSR-SRERRRSRSRDRRRSRSHDRS 339
Query: 444 QGAQARRGPRGASRDGGRGRGRGR 467
+ R R SRD R + R R
Sbjct: 340 E-----RKHRSRSRDRRRSKSRDR 358
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 6/107 (5%)
Query: 356 VGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
VGG + E PS ++ + GED+DE+EDD+ E + E E+ + L S
Sbjct: 74 VGGGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEE----ESSAESLVGSS 129
Query: 416 GRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRG 462
G G D +G + +GPRG+ GG G
Sbjct: 130 GGSSSDETRSLSPGAASSSS--GDGDGKEGLEEPKGPRGSQGGGGGG 174
>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
Length = 732
Score = 40.4 bits (93), Expect = 0.004
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 10/146 (6%)
Query: 234 GAGLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEG 293
G G S + + P+G T LP +A G +R Q R P+ +K E
Sbjct: 4 GGGGSGTGSRPEGTARGTSLPGKIAEPGAVRTSQPNYR-----PQGMEGFLKSDERQRLA 58
Query: 294 KVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKK 353
K Q ILE K+K+ RL+ ++Q ++ +Q QRE ++ ++E +K
Sbjct: 59 KERREEREKCLAAREQQILE-KQKRARLQYEKQMEERWRKLEEQRQREDQKRAAVEEKRK 117
Query: 354 ARVGGSDEEASGIP----SRTASLEL 375
++ +E + RT LEL
Sbjct: 118 QKLREEEERLEAMMRRSLERTQQLEL 143
Score = 32.7 bits (73), Expect = 0.73
Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 303 KTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQR---EAHRKKSLEGMKKARVGGS 359
+ E+E Q LE +E L+ KA+ + + + RKQE+ + KK EG +K + G
Sbjct: 422 RVEKEEQDRLEREE--LKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEGEEKRKAG-- 477
Query: 360 DEEASGIPSRTASLELGEDDDEQEDDDIE 388
EEA L+ ++ ++QE IE
Sbjct: 478 -EEAKRKAEEELLLKEKQEQEKQEKAMIE 505
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 40.0 bits (92), Expect = 0.005
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 3/124 (2%)
Query: 299 SFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGG 358
S S+ EEE + E +E+++R + + + ++ + +++ E+ E +KK + KK V
Sbjct: 2242 SLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQE 2301
Query: 359 SD---EEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSP 415
+ EE I S + L ++++E+E +E E ++ + +++R
Sbjct: 2302 KEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQRRKSLR 2361
Query: 416 GRKR 419
GR+R
Sbjct: 2362 GRER 2365
Score = 34.7 bits (78), Expect = 0.19
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 294 KVMFHSFVSKTE------EELQAILEAKEKKLRLKAQRQAQQAQNVQRKQE---QREAHR 344
K F S V + E EE++++L+ EK+ L ++ + ++ + +R++E + E R
Sbjct: 2210 KEKFSSQVDEVESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEER 2269
Query: 345 KKSLEGMKKARVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFP 404
K+ EG +K +V +EE + E +++ +++++ E + + E +E L
Sbjct: 2270 KEEEEGEEK-QVEKEEEE-----KKKKKKEKKKEEVQEKEEVFEEKEEIMSEEETESLSD 2323
Query: 405 EAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASR 457
E +++ E+DR + L +K K ++ Q R+ RG R
Sbjct: 2324 EEEEEESCS------LEEEVDREKEILKKEKQFKLQE-----QRRKSLRGRER 2365
>gi|29568103 U1 small nuclear ribonucleoprotein 70 kDa [Homo
sapiens]
Length = 437
Score = 40.0 bits (92), Expect = 0.005
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 17/158 (10%)
Query: 315 KEKKLRLKAQRQAQQAQNVQRKQEQREAH-RKKSLEGMKKARVGGSDEEASGIPSRTASL 373
KE++ R R ++ + K+E+R + R K + +K R S E A R L
Sbjct: 250 KERERRRSRSRDRRRRSRSRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEEL 309
Query: 374 ELGEDDDEQEDDDIEYFCQAVGEAPSED-----LFPEAKQKRLAKSPGRKRKRWEMDRGR 428
G D + + G+AP +D L P+ K R R+R R
Sbjct: 310 RGGGGDMAEPSE--------AGDAPPDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSE 361
Query: 429 GRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRG 466
+++ + +D+ + + +RG RG+ R RG G
Sbjct: 362 R---ERRRDRDRDRDRDREHKRGERGSERGRDEARGGG 396
>gi|46519147 ankyrin repeat and KH domain containing 1 isoform 1 [Homo
sapiens]
Length = 2542
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 317 KKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELG 376
K+L L+ R+ + Q + K+E+R+ RKK E K+ + +E+ P + EL
Sbjct: 1433 KELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQ----EEDEENKPKENS--ELP 1486
Query: 377 EDDDEQE-DDDIE 388
ED+DE+E D+D+E
Sbjct: 1487 EDEDEEENDEDVE 1499
>gi|37620163 ANKHD1-EIF4EBP3 protein [Homo sapiens]
Length = 2617
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 317 KKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELG 376
K+L L+ R+ + Q + K+E+R+ RKK E K+ + +E+ P + EL
Sbjct: 1433 KELDLEKSREESRKQALAAKREKRKEKRKKKKEEQKRKQ----EEDEENKPKENS--ELP 1486
Query: 377 EDDDEQE-DDDIE 388
ED+DE+E D+D+E
Sbjct: 1487 EDEDEEENDEDVE 1499
>gi|213385278 TNF receptor-associated factor 3 interacting protein 1
isoform 2 [Homo sapiens]
Length = 625
Score = 39.3 bits (90), Expect = 0.008
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Query: 313 EAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTAS 372
E E K R ++Q+ N ++E+ H K+ E A + +E S R
Sbjct: 132 EKGEVKGRASLTSRSQELDNKNVREEESRVH--KNTEDRGDAEI----KERSTSRDRKQK 185
Query: 373 LELGEDDDEQEDD-DIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRL 431
EL ED +E D D E + G E E ++ + P +R++ +R R R
Sbjct: 186 EELKEDRKPREKDKDKEKAKENGGNRHREG---ERERAKARARPDNERQKDRGNRERDRD 242
Query: 432 CDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKRV 472
++K +T+ KS+G + + R R+ R +G+ R +RV
Sbjct: 243 SERK-KETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRV 282
>gi|20070262 TNF receptor-associated factor 3 interacting protein 1
isoform 1 [Homo sapiens]
Length = 691
Score = 39.3 bits (90), Expect = 0.008
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 11/161 (6%)
Query: 313 EAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTAS 372
E E K R ++Q+ N ++E+ H K+ E A + +E S R
Sbjct: 132 EKGEVKGRASLTSRSQELDNKNVREEESRVH--KNTEDRGDAEI----KERSTSRDRKQK 185
Query: 373 LELGEDDDEQEDD-DIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRL 431
EL ED +E D D E + G E E ++ + P +R++ +R R R
Sbjct: 186 EELKEDRKPREKDKDKEKAKENGGNRHREG---ERERAKARARPDNERQKDRGNRERDRD 242
Query: 432 CDQKFPKTKDKSQGAQARRGPRGASRDGGRGRGRGRPGKRV 472
++K +T+ KS+G + + R R+ R +G+ R +RV
Sbjct: 243 SERK-KETERKSEGGKEKERLRDRDRERDRDKGKDRDRRRV 282
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 39.3 bits (90), Expect = 0.008
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 41/191 (21%)
Query: 303 KTEEELQAILEAKEKKLRLKAQRQAQQAQNVQ--------RKQEQREAHRKKSLEGMKKA 354
+ E E + LEA+E++ RL+AQ QA++ + ++ R+QE+ E + L+ ++
Sbjct: 305 RREREERERLEAEEERRRLQAQAQAEERRRLEEDARLEERRRQEEEEGRCAEELKRQEEE 364
Query: 355 RVGGSDE------EASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDL------ 402
G +E E G P G E+ED E + G+A ED
Sbjct: 365 EAEGWEELEQQEAEVQGPPEALEETGEGRRGAEEEDLGEE---EEEGQAHLEDWRGQLSE 421
Query: 403 ----FPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRD 458
F E + + P +R+ E +C+++ P+ A+ RR +G S
Sbjct: 422 LLNDFEERLEDQERLKPEGQREHSE----EPGICEEQNPE-------AERRREQQGRS-- 468
Query: 459 GGRGRGRGRPG 469
G +G RPG
Sbjct: 469 -GDFQGADRPG 478
Score = 34.3 bits (77), Expect = 0.25
Identities = 42/193 (21%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 291 GEGKVMFHSFVSKT--EEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQR-------- 340
GE K +H EE + E ++L K +RQ +A +R +EQR
Sbjct: 201 GEDKPTWHEEEPNPLDSEEERRRQEDYWRELEAKCKRQKAEAAEKRRLEEQRLQALERRL 260
Query: 341 --EAHRKKSLEGMKKARVGGSDEEASGIPSRTASLEL-GEDDDEQEDDDIEYFCQAVGEA 397
E R++ LE + + + E + + SLE G +D E+ + + +A E
Sbjct: 261 WEENRRQELLEEEGEGQEPPLEAERAPREEQQRSLEAPGWEDAERREREERERLEAEEER 320
Query: 398 PSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQAR-------R 450
+A+++R + R +R + GR ++ + +++++G + +
Sbjct: 321 RRLQAQAQAEERRRLEEDARLEERRRQEEEEGRCAEELKRQEEEEAEGWEELEQQEAEVQ 380
Query: 451 GPRGASRDGGRGR 463
GP A + G GR
Sbjct: 381 GPPEALEETGEGR 393
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 38.5 bits (88), Expect = 0.013
Identities = 32/156 (20%), Positives = 67/156 (42%), Gaps = 3/156 (1%)
Query: 317 KKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKKARVGGSDEEASGIPSRTASLELG 376
K K++ +++ + K R R +S + +K+R ++ S S S
Sbjct: 212 KSSHSKSRSRSRSGSRSRSKSRSRSQSRSRSKK--EKSRSPSKEKSRSRSHSAGKSRSKS 269
Query: 377 EDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKRLAKSPGRKRKRWEMDRGRGRLCDQKF 436
+D E++ + + + +PS + R + + KR + RGR + +
Sbjct: 270 KDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQ 329
Query: 437 PKTKDKSQ-GAQARRGPRGASRDGGRGRGRGRPGKR 471
+++ +S+ G+++R R S+D +GR R R R
Sbjct: 330 SRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESR 365
Score = 33.9 bits (76), Expect = 0.33
Identities = 34/184 (18%), Positives = 74/184 (40%), Gaps = 12/184 (6%)
Query: 292 EGKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSL-EG 350
E K+ + V K + + ++K K +++ Q ++ + +R R ++KSL +
Sbjct: 274 EEKIQNNDNVGKPKSRSPSRHKSKSKS---RSRSQERRVEEEKRGSVSRGRSQEKSLRQS 330
Query: 351 MKKARVGGSDEEASGIPSRTASLELGEDDDEQEDDDIEYFCQAVGEAPSEDLFPEAKQKR 410
++R G S S++ G +E ++ + SE ++
Sbjct: 331 RSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRS-----RSRSRSKSERSRKRGSKRD 385
Query: 411 LAKSPGRKRKRWEMDRGRGRLCDQKFPKTKDKSQGAQARRGPRGASRDGGRG---RGRGR 467
+K+K+ + DR + R + K ++ ++ ++R RG S + G R R R
Sbjct: 386 SKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSR 445
Query: 468 PGKR 471
+
Sbjct: 446 SNSK 449
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,002,756
Number of Sequences: 37866
Number of extensions: 839839
Number of successful extensions: 8892
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 354
Number of HSP's that attempted gapping in prelim test: 7227
Number of HSP's gapped (non-prelim): 1423
length of query: 473
length of database: 18,247,518
effective HSP length: 106
effective length of query: 367
effective length of database: 14,233,722
effective search space: 5223775974
effective search space used: 5223775974
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.