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Search of human proteins with 47132527
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
(735 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 1512 0.0
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 1251 0.0
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 1075 0.0
gi|27734871 regulatory factor X, 6 [Homo sapiens] 433 e-121
gi|238859557 regulatory factor X1 [Homo sapiens] 288 1e-77
gi|19743879 regulatory factor X2 isoform b [Homo sapiens] 288 2e-77
gi|19743881 regulatory factor X2 isoform a [Homo sapiens] 279 8e-75
gi|4506495 regulatory factor X3 isoform a [Homo sapiens] 278 1e-74
gi|19743884 regulatory factor X3 isoform b [Homo sapiens] 277 3e-74
gi|224586784 hypothetical protein LOC731220 [Homo sapiens] 85 2e-16
gi|148613886 regulatory factor X domain containing 2 [Homo sapiens] 69 2e-11
gi|71040090 regulatory factor X, 5 [Homo sapiens] 66 1e-10
gi|4557843 regulatory factor X, 5 [Homo sapiens] 66 1e-10
gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens] 49 1e-05
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 45 2e-04
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 44 7e-04
gi|116284392 mucin 2 precursor [Homo sapiens] 43 0.001
gi|151301154 mucin 6, gastric [Homo sapiens] 43 0.001
gi|37595553 ring finger protein 111 [Homo sapiens] 43 0.001
gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Hom... 41 0.005
gi|109637784 GLIS family zinc finger 3 isoform a [Homo sapiens] 40 0.010
gi|109637782 GLIS family zinc finger 3 isoform b [Homo sapiens] 40 0.010
gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo ... 40 0.010
gi|169211436 PREDICTED: hypothetical protein [Homo sapiens] 39 0.017
gi|167736355 mucin 4 isoform a [Homo sapiens] 39 0.017
gi|20070107 orthodenticle homeobox 1 [Homo sapiens] 39 0.023
gi|91982772 mucin 17 [Homo sapiens] 39 0.023
gi|33946327 nucleoporin 214kDa [Homo sapiens] 38 0.038
gi|239751395 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.038
gi|239745904 PREDICTED: hypothetical protein, partial [Homo sapi... 38 0.038
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 1512 bits (3914), Expect = 0.0
Identities = 735/735 (100%), Positives = 735/735 (100%)
Query: 1 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA 60
MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA
Sbjct: 1 MHCGLLEEPDMDSTESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPA 60
Query: 61 TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG 120
TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG
Sbjct: 61 TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLG 120
Query: 121 TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE 180
TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE
Sbjct: 121 TRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPE 180
Query: 181 FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML 240
FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML
Sbjct: 181 FPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHML 240
Query: 241 PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD 300
PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD
Sbjct: 241 PVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHD 300
Query: 301 LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK 360
LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK
Sbjct: 301 LPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITK 360
Query: 361 QTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSL 420
QTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSL
Sbjct: 361 QTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSL 420
Query: 421 KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL 480
KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL
Sbjct: 421 KKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANEL 480
Query: 481 MRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG 540
MRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG
Sbjct: 481 MRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG 540
Query: 541 LSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGY 600
LSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGY
Sbjct: 541 LSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGY 600
Query: 601 TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM 660
TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM
Sbjct: 601 TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM 660
Query: 661 SSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP 720
SSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP
Sbjct: 661 SSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP 720
Query: 721 GFAYINGEASTGWAK 735
GFAYINGEASTGWAK
Sbjct: 721 GFAYINGEASTGWAK 735
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 1251 bits (3236), Expect = 0.0
Identities = 609/609 (100%), Positives = 609/609 (100%)
Query: 127 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 186
YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD
Sbjct: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKD 92
Query: 187 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 246
LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS
Sbjct: 93 LNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSS 152
Query: 247 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 306
TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR
Sbjct: 153 TVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR 212
Query: 307 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 366
NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM
Sbjct: 213 NIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTM 272
Query: 367 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 426
EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ
Sbjct: 273 EDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 332
Query: 427 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 486
FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG
Sbjct: 333 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKG 392
Query: 487 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA 546
EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA
Sbjct: 393 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGA 452
Query: 547 MQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNY 606
MQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNY
Sbjct: 453 MQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNY 512
Query: 607 GSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRL 666
GSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRL
Sbjct: 513 GSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRL 572
Query: 667 HPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYIN 726
HPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYIN
Sbjct: 573 HPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYIN 632
Query: 727 GEASTGWAK 735
GEASTGWAK
Sbjct: 633 GEASTGWAK 641
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 1075 bits (2781), Expect = 0.0
Identities = 534/538 (99%), Positives = 536/538 (99%)
Query: 13 STESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA 72
STESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA
Sbjct: 22 STESWIERCLNESENKRYSSHTSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIA 81
Query: 73 EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI 132
EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI
Sbjct: 82 EGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGI 141
Query: 133 AVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS 192
AVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS
Sbjct: 142 AVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLNLPAS 201
Query: 193 LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV 252
LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV
Sbjct: 202 LPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIV 261
Query: 253 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 312
GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL
Sbjct: 262 GVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFEL 321
Query: 313 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 372
SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE
Sbjct: 322 SRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDE 381
Query: 373 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 432
HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS
Sbjct: 382 HRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWS 441
Query: 433 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE 492
CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE
Sbjct: 442 CFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGSTAE 501
Query: 493 VREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSY 550
VREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG +S+
Sbjct: 502 VREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGNGKSF 559
>gi|27734871 regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 433 bits (1114), Expect = e-121
Identities = 249/603 (41%), Positives = 334/603 (55%), Gaps = 34/603 (5%)
Query: 54 KPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQ 113
K T TLQWLEENY + EGVC+PR LY HYLDFC K +P AA+FGK IRQ+FP
Sbjct: 117 KKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPL 176
Query: 114 LTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKKEVSKQTVAYSPRSK 173
LTTRRLGTRG SKYHYYGI +KESS YY +YS KG S + K T YS SK
Sbjct: 177 LTTRRLGTRGHSKYHYYGIGIKESSAYYHSVYSGKGLTRFSGSKLKNEGGFTRKYSLSSK 236
Query: 174 LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 233
GTLLPEFP+ + L + ++KV T IMMY+THCQ ILD I NF+E+Q FLLHFWQ
Sbjct: 237 TGTLLPEFPSAQHLVYQGCISKDKVDTLIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQ 296
Query: 234 GMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEW 293
GMP H+LP+L + +++I VCDSILYK ++ VL+P +Q +P+SL IR FAK ++W
Sbjct: 297 GMPDHLLPLLENPVIIDIFCVCDSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQW 356
Query: 294 LKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNV 353
+ +L +LPE L + K + RRF L+RQTS HL Q +R + + M+ D V
Sbjct: 357 VVSSLENLPEALTDKKIPIVRRFVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERV 416
Query: 354 DLNSITKQTLYTMEDSRDEHRKLITQ-----LYQEFDHLLEEQSPIESYIEWLDTMVDRC 408
DLNSI Q L T+ S D + T+ ++QE LL++ + +E++IEWLDT+V++
Sbjct: 417 DLNSIGSQALLTISGSTDTESGIYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQR 476
Query: 409 VVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLL 468
V+K + + SLKK AQ FLL WS FG RV+ ++TL++A SFGSFHLI ++ D+Y+L +
Sbjct: 477 VIKTSKQNGRSLKKRAQDFLLKWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAM 536
Query: 469 ESLHCQERANELMRAM-----KGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVE 523
E+ ++ EL + + S A A + S K+ + VE
Sbjct: 537 ETQFNNDKEQELQNLLDKYMKNSDASKAAFTASPSSCFLANRNKGSMVSSDAVKNESHVE 596
Query: 524 ---VPPPSSPVSN--------PSPEYTGLSTTGAM---QSYTWSLTYTVTTAAGSPAENS 569
+P PSS P+ + TG M Q +T ++ A S
Sbjct: 597 TTYLPLPSSQPGGLGPALHQFPAGNTDNMPLTGQMELSQIAGHLMTPPISPAMASRGSVI 656
Query: 570 QQLPCMRN-------THVPSSSVTHRIPVY---PHREEHGYTGSYNYGSYGNQHPHPMQS 619
Q P PS T+ P+Y P Y+ S NY + PH
Sbjct: 657 NQGPMAGRPPSVGPVLSAPSHCSTYPEPIYPALPQANHDFYSTSSNYQTVFRAQPHSTSG 716
Query: 620 QYP 622
YP
Sbjct: 717 LYP 719
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 288 bits (738), Expect = 1e-77
Identities = 179/485 (36%), Positives = 259/485 (53%), Gaps = 64/485 (13%)
Query: 57 STPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTT 116
++PAT+QWL +NYE AEGV +PRS LY HYL C++ +PVNAASFGK+IR F L T
Sbjct: 434 ASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRT 493
Query: 117 RRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSE--------------------- 155
RRLGTRG SKYHYYG+ +K SS +M ++ A +
Sbjct: 494 RRLGTRGNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGV 553
Query: 156 -------TGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTFIMMY 205
TG ++S Q Y LP+F + DL LP + + F ++Y
Sbjct: 554 AVGQQPSTGLSDISAQVQQYQQFLDASRSLPDFTEL-DLQGKVLPEGVGPGDIKAFQVLY 612
Query: 206 RTHCQRILDTVIRANFDEVQSFLLHFW--------------------QGMPPHMLPVLGS 245
R HC+ I+D ++ F V++ FW + +P +L +L
Sbjct: 613 REHCEAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSK 672
Query: 246 -STVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPEN 304
V+ CD++LY+ + +L+P VL+ +P +LTQ IR FAK L+ WL A+ ++PE
Sbjct: 673 FEPVLQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEE 732
Query: 305 LRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLY 364
+ +K + F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q +
Sbjct: 733 MLRVKVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASW 792
Query: 365 TMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGS--LKK 422
R E R ++ +L Q+F L++Q+ +E + WLD +V +V QGS K
Sbjct: 793 V---CRCEDR-VVQRLEQDFKVTLQQQNSLEQWAAWLDGVVS----QVLKPYQGSAGFPK 844
Query: 423 VAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMR 482
A+ FLL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E Q + E
Sbjct: 845 AAKLFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAK-GETPI 903
Query: 483 AMKGE 487
A+ GE
Sbjct: 904 AVMGE 908
>gi|19743879 regulatory factor X2 isoform b [Homo sapiens]
Length = 698
Score = 288 bits (736), Expect = 2e-77
Identities = 177/496 (35%), Positives = 261/496 (52%), Gaps = 60/496 (12%)
Query: 45 EEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFG 104
+ ++ A S+PATLQWL +NYE AEGV +PRS+LY HYL C+++ PVNAASFG
Sbjct: 158 DSTRHSLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFG 217
Query: 105 KIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK---------ESSQYY-------------- 141
K+IR F L TRRLGTRG SKYHYYGI +K E +QY
Sbjct: 218 KLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYR 277
Query: 142 -----DVMYSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEF--PNVKDLNLPASLP 194
D + + + T ++ ++ Q+ + + + PEF P++ L +
Sbjct: 278 PAQKTDSLGDSGSHSGLHSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVT 337
Query: 195 EEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMP-----PHMLP-------- 241
V ++YR HC+ +D V+ F ++ L FW P LP
Sbjct: 338 LHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEG 397
Query: 242 -VLGSSTVVNI---------VGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLD 291
VL ++++ + CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+
Sbjct: 398 AVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLE 457
Query: 292 EWLKVALHDLPENLRNIKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWR 351
WL A+ D P+ + K + F+Q LRR TSLNHL QA+R V+ + QML D
Sbjct: 458 GWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLN 517
Query: 352 NVDLNSITKQTLYTMEDSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVK 411
VD ++ +Q + + ++ +L Q+F L++QS ++ + WLD++V + + +
Sbjct: 518 RVDFANVQEQASWVCQC----EESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQ 573
Query: 412 VAAKRQGSLKKVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESL 471
A S K A+QFLL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 574 HAG--SPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH- 630
Query: 472 HCQERANELMRAMKGE 487
E E A+ GE
Sbjct: 631 RVAEATGETPIAVMGE 646
>gi|19743881 regulatory factor X2 isoform a [Homo sapiens]
Length = 723
Score = 279 bits (713), Expect = 8e-75
Identities = 172/479 (35%), Positives = 252/479 (52%), Gaps = 60/479 (12%)
Query: 62 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 121
LQWL +NYE AEGV +PRS+LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 200 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGT 259
Query: 122 RGQSKYHYYGIAVK---------ESSQYY-------------------DVMYSKKGAAWV 153
RG SKYHYYGI +K E +QY D + + +
Sbjct: 260 RGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGL 319
Query: 154 SETGKKEVSKQTVAYSPRSKLGTLLPEF--PNVKDLNLPASLPEEKVSTFIMMYRTHCQR 211
T ++ ++ Q+ + + + PEF P++ L + V ++YR HC+
Sbjct: 320 HSTPEQTMAVQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHCEA 379
Query: 212 ILDTVIRANFDEVQSFLLHFWQGMP-----PHMLP---------VLGSSTVVNI------ 251
+D V+ F ++ L FW P LP VL ++++
Sbjct: 380 TVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPI 439
Query: 252 ---VGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNI 308
+ CD ILY+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A+ D P+ +
Sbjct: 440 LRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQT 499
Query: 309 KFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMED 368
K + F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 500 KVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQC 559
Query: 369 SRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFL 428
++ +L Q+F L++QS ++ + WLD++V + + + A S K A+QFL
Sbjct: 560 ----EESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAG--SPSFPKAARQFL 613
Query: 429 LMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 487
L WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E E E A+ GE
Sbjct: 614 LKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAEATGETPIAVMGE 671
>gi|4506495 regulatory factor X3 isoform a [Homo sapiens]
Length = 707
Score = 278 bits (712), Expect = 1e-74
Identities = 172/485 (35%), Positives = 251/485 (51%), Gaps = 61/485 (12%)
Query: 62 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 121
LQWL +NYE AEGV +PRS LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
Query: 122 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 158
RG SKYHYYGI VK S Q Y M G A + +G+
Sbjct: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
Query: 159 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 211
+ V + +A S + LPEF V+ +LP E + + +YR HC+
Sbjct: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
Query: 212 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 247
ILD V+ F ++ FW+ P ++ + +
Sbjct: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
Query: 248 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 307
++ + CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ +
Sbjct: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
Query: 308 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 367
K F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
Query: 368 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 427
+ ++ +L +F L++QS +E + WLD ++ + + + S K A+QF
Sbjct: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
Query: 428 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGE 487
LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E + E A+ GE
Sbjct: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEH-RVAQATGETPIAVMGE 656
Query: 488 GSTAE 492
AE
Sbjct: 657 VREAE 661
>gi|19743884 regulatory factor X3 isoform b [Homo sapiens]
Length = 749
Score = 277 bits (708), Expect = 3e-74
Identities = 166/462 (35%), Positives = 243/462 (52%), Gaps = 60/462 (12%)
Query: 62 LQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGT 121
LQWL +NYE AEGV +PRS LY HYL C+++ PVNAASFGK+IR F L TRRLGT
Sbjct: 184 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGT 243
Query: 122 RGQSKYHYYGIAVKESS----------------------QYYDVMYSKKGAA-WVSETGK 158
RG SKYHYYGI VK S Q Y M G A + +G+
Sbjct: 244 RGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQ 303
Query: 159 K---EVSKQTVAYSPRSK----LGTLLPEFPNVKDLNLPASLPEEKVSTFIMMYRTHCQR 211
+ V + +A S + LPEF V+ +LP E + + +YR HC+
Sbjct: 304 QTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISSLPDGTTFEDIKSLQSLYREHCEA 363
Query: 212 ILDTVIRANFDEVQSFLLHFWQGMP------------------------PHMLPVLGSST 247
ILD V+ F ++ FW+ P ++ + +
Sbjct: 364 ILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHES 423
Query: 248 VVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRN 307
++ + CD +Y+A+ +L+P VL+ +P +LTQ IR FAK L+ WL A++++P+ +
Sbjct: 424 ILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQ 483
Query: 308 IKFELSRRFSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTME 367
K F+Q LRR TSLNHL QA+R V+ + QML D VD ++ +Q + +
Sbjct: 484 TKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 543
Query: 368 DSRDEHRKLITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQF 427
+ ++ +L +F L++QS +E + WLD ++ + + + S K A+QF
Sbjct: 544 CDDN----MVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGR--PSFPKAARQF 597
Query: 428 LLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 469
LL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 598 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVE 639
>gi|224586784 hypothetical protein LOC731220 [Homo sapiens]
Length = 473
Score = 85.1 bits (209), Expect = 2e-16
Identities = 70/285 (24%), Positives = 128/285 (44%), Gaps = 13/285 (4%)
Query: 205 YRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAIS 264
Y +C+ IL V + L FW+ + + ++ V + D LYK I
Sbjct: 69 YCNYCRDILRNV--------EDLLTSFWKSLQQDTVMLMSLPDVCQLFKCYDVQLYKGIE 120
Query: 265 GVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILRRQT 324
VL+ L+ + + ++ F+K+ WL AL +P L+ K + F + LRR+T
Sbjct: 121 DVLLHDFLEDVSIQYLKSVQLFSKKFKLWLLNALEGVPALLQISKLKEVTLFVKRLRRKT 180
Query: 325 SLNHLCQASRTVIHSADITFQMLEDWR---NVDLNSITKQTLYTMEDSRDE-HRKLITQL 380
L+++ + R V+ S + D + N + +K+ L + DE +
Sbjct: 181 YLSNMAKTMRMVLKSKRRVSVLKSDLQAIINQGTLATSKKALASDRSGADELENNPEMKC 240
Query: 381 YQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFGTRVIR 440
+ LL + + ++ L + + V + + ++ K+A F L W+ T V +
Sbjct: 241 LRNLISLLGTSTDLRVFLSCLSSHLQAFVFQTSRSKE-EFTKLAASFQLRWNLLLTAVSK 299
Query: 441 DMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMK 485
MTL SFGS+HL HL+ +Y++++L+S +E E M +K
Sbjct: 300 AMTLCHRDSFGSWHLFHLLLLEYMIHILQSCLEEEEEEEDMGTVK 344
>gi|148613886 regulatory factor X domain containing 2 [Homo sapiens]
Length = 1460
Score = 68.6 bits (166), Expect = 2e-11
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 4/102 (3%)
Query: 34 TSLGNVSNDENEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKN 93
+ L N + ++RA + H+ W+ E +P+ +Y Y +C+
Sbjct: 85 SGLSNGEKSDQNAMSSSRAQQMHA----FSWIRNTLEEHPETSLPKQEVYDEYKSYCDNL 140
Query: 94 DTQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK 135
P++AA FGKI++ FP + RRLGTRG+SKY Y G+ K
Sbjct: 141 GYHPLSAADFGKIMKNVFPNMKARRLGTRGKSKYCYSGLRKK 182
>gi|71040090 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 66.2 bits (160), Expect = 1e-10
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 63 QWLEENYEIAEGVCIPRSALYMHYLDFCEKNDT-QPVNAASFGKIIRQQFPQLTTRRLGT 121
+W+ + E C+P+ ++Y Y +CE +P++ A+FGKIIR+ FP + RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 122 RGQSKYHYYGIAVK 135
RGQSKY Y GI K
Sbjct: 154 RGQSKYCYSGIRRK 167
>gi|4557843 regulatory factor X, 5 [Homo sapiens]
Length = 616
Score = 66.2 bits (160), Expect = 1e-10
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 63 QWLEENYEIAEGVCIPRSALYMHYLDFCEKNDT-QPVNAASFGKIIRQQFPQLTTRRLGT 121
+W+ + E C+P+ ++Y Y +CE +P++ A+FGKIIR+ FP + RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 122 RGQSKYHYYGIAVK 135
RGQSKY Y GI K
Sbjct: 154 RGQSKYCYSGIRRK 167
>gi|4505939 DNA-directed RNA polymerase II A [Homo sapiens]
Length = 1970
Score = 49.3 bits (116), Expect = 1e-05
Identities = 66/239 (27%), Positives = 95/239 (39%), Gaps = 26/239 (10%)
Query: 504 APTPSPV-PSFSPAK---SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLT---Y 556
+P+ SP PS+SP S TS P S S SP YT S + + S ++S T Y
Sbjct: 1717 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNY 1776
Query: 557 TVTTAAGSPAENS------QQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYG 610
T T+ SP S P + S T + P Y S +Y
Sbjct: 1777 TPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTS 1836
Query: 611 NQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT- 669
++ S P+ P T S P + + S P SPTS P +TP+ PT
Sbjct: 1837 PKYTPTSPSYSPSSPEYTPTS-PKYSPTSPKYSPTSPKYSPTS---PTYSPTTPKYSPTS 1892
Query: 670 ----PVTPRW-PEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFA 723
P +P + P P + + S S +Y +S Y+P T+ + S Y PG++
Sbjct: 1893 PTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP-TSPKGSTYSPTS--PGYS 1948
Score = 46.2 bits (108), Expect = 1e-04
Identities = 61/215 (28%), Positives = 86/215 (40%), Gaps = 20/215 (9%)
Query: 504 APTPSPV-PSFSPAK---SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLT---Y 556
+P+ SP PS+SP S TS P S S SP Y+ S + + S ++S T Y
Sbjct: 1612 SPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1671
Query: 557 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHP 616
+ T+ + SP S P + S S + P Y S +Y +
Sbjct: 1672 SPTSPSYSPTSPSYS-PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1730
Query: 617 MQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPT-SRMEPCLMSSTPRLHPT-----P 670
S P P + S +Y+P +S Y SP+ S P ++P PT P
Sbjct: 1731 SPSYSPTSPSYSPTSP--NYSP---TSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSP 1785
Query: 671 VTPRW-PEVPSANTCYTSPSVHSARYGNSSDMYTP 704
+P + P PS + S S S RY S YTP
Sbjct: 1786 TSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Score = 41.2 bits (95), Expect = 0.003
Identities = 54/200 (27%), Positives = 75/200 (37%), Gaps = 38/200 (19%)
Query: 513 FSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQL 572
FSP+ ++ + P SP +P+P + GSP +S +
Sbjct: 1546 FSPSAASDASGFSPGYSPAWSPTP-----------------------GSPGSPGPSSPYI 1582
Query: 573 PCMRNTHVPSSSVTHRIPVYPHREEHGYT-GSYNYGSYGNQHPHPMQSQYPALPHDTAIS 631
P PS S T P Y R GYT S +Y + S P P+ + S
Sbjct: 1583 PSPGGAMSPSYSPTS--PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTS 1640
Query: 632 GPLHYAPYHRS-SAQYPFNSPTSRMEPCLMSSTPRLHPT-----PVTPRW-PEVPSANTC 684
Y+P S S P SPTS P ++P PT P +P + P PS +
Sbjct: 1641 P--SYSPTSPSYSPTSPSYSPTS---PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1695
Query: 685 YTSPSVHSARYGNSSDMYTP 704
S S S Y +S Y+P
Sbjct: 1696 SPSYSPTSPSYSPTSPSYSP 1715
Score = 30.0 bits (66), Expect = 8.0
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 504 APTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 563
+PT SP SP + TS + P S S SP+Y+ S T + S S TY+ T+
Sbjct: 1892 SPTYSPT---SPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGS-TYSPTSPGY 1947
Query: 564 SPAENSQQL 572
SP + L
Sbjct: 1948 SPTSPTYSL 1956
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 45.4 bits (106), Expect = 2e-04
Identities = 53/218 (24%), Positives = 79/218 (36%), Gaps = 23/218 (10%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAM---------QSY 550
T PTP+ S +P T+ V P +P +P T ++TT + Q+
Sbjct: 1321 TVTPTPTPTSTQSTTPTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP 1380
Query: 551 TWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHREEHGYTGSYNYGSY 609
T + T TT +P Q P T P ++ T P P + T +
Sbjct: 1381 TTTPITTTTTVTPTPTPTGTQTP----TSTPITTTTTVTPTPTPTGTQTPTTTPITTTTT 1436
Query: 610 GNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT 669
P P +Q P TAI+ P P + T P ++T PT
Sbjct: 1437 VTPTPTPTGTQAPT---PTAITTTSTVTP-----TPTPTGTQTPTTTPITTTTTVTPTPT 1488
Query: 670 PVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
P + P P+A T T+ + G + TP+TT
Sbjct: 1489 PTGTQTP-TPTAITTTTTVTPTPTPTGTQTPTSTPITT 1525
Score = 40.4 bits (93), Expect = 0.006
Identities = 59/251 (23%), Positives = 88/251 (35%), Gaps = 34/251 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPV----PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 543
G+ A I T PTP+P P+ +P + T+ V P +P +P T ++T
Sbjct: 1445 GTQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTT--VTPTPTPTGTQTPTPTAITT 1502
Query: 544 TGAM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YP 593
T + Q+ T + T TT +P Q P T P S+ T P P
Sbjct: 1503 TTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTP----TPTPISTTTTVTPTPTP 1558
Query: 594 HREEHGYTGSYNYGSYGNQHPHPMQSQYP--ALPHDTAISGPLHYAPYHRSSAQYPFN-- 649
+ T + P P +Q P L T P +S+ P
Sbjct: 1559 TGTQTPTTTPITTTTTVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTT 1618
Query: 650 -------SPTSRMEPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSD 700
+PT P + +S+T + PTP P +T T+P +
Sbjct: 1619 TTVTATPTPTGTQTPTMIPISTTTTVTPTPTPTTGSTGPPTHTS-TAPIAELTTSNPPPE 1677
Query: 701 MYTPLTTRRNS 711
TP T+R S
Sbjct: 1678 SSTPQTSRSTS 1688
Score = 38.9 bits (89), Expect = 0.017
Identities = 53/233 (22%), Positives = 84/233 (36%), Gaps = 27/233 (11%)
Query: 488 GSTAEVREEIILTEAAAPTPSPV----PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 543
G+ I T PTP+P P+ +P + T+ V P +P +P T ++T
Sbjct: 1353 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTT--VTPTPTPTGTQTPTSTPITT 1410
Query: 544 TGAM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPH 594
T + Q+ T + T TT +P Q P T + ++S P P
Sbjct: 1411 TTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAP--TPTAITTTSTVTPTPT-PT 1467
Query: 595 REEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSR 654
+ T + P P +Q P TAI+ P P + T
Sbjct: 1468 GTQTPTTTPITTTTTVTPTPTPTGTQTPT---PTAITTTTTVTP-----TPTPTGTQTPT 1519
Query: 655 MEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
P ++T PTP + P P+ + T+ + G + TP+TT
Sbjct: 1520 STPITTTTTVTPTPTPTGTQTP-TPTPISTTTTVTPTPTPTGTQTPTTTPITT 1571
Score = 35.8 bits (81), Expect = 0.15
Identities = 51/225 (22%), Positives = 78/225 (34%), Gaps = 54/225 (24%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSV----EVPPPSSPVSNPSPEYTGLSTTGAM------- 547
+T TP+P P+ + A + T++ V P +P +P T ++TT +
Sbjct: 1431 ITTTTTVTPTPTPTGTQAPTPTAITTTSTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPT 1490
Query: 548 --QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYN 605
Q+ T + T TT +P Q P T P ++ T P
Sbjct: 1491 GTQTPTPTAITTTTTVTPTPTPTGTQTP----TSTPITTTTTVTPT-------------- 1532
Query: 606 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR 665
P P +Q P T IS P P + T P ++T
Sbjct: 1533 --------PTPTGTQTPT---PTPISTTTTVTP-----TPTPTGTQTPTTTPITTTTTVT 1576
Query: 666 LHPTPV---TPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
PTP TP + + T +P+ S + S TP+TT
Sbjct: 1577 PTPTPTGTQTPTTVLITTTTTMTPTPTPTSTK----STTVTPITT 1617
Score = 34.7 bits (78), Expect = 0.33
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 501 EAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTT 560
E + P P+ +P ++ + PP S ++P T +TTG+ + T S T TT
Sbjct: 1706 EMTSTAPPSTPT-APTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTT 1764
Query: 561 AAGSPAENSQQLPCMRNT----HVPSSSVTHRI--PVYPHREEHGYTGSYNYGSYGNQHP 614
+A +P P + T PSS + + Y E Y G+Y Y
Sbjct: 1765 SAWTPTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYF---- 1820
Query: 615 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPT---SRMEPCLMSSTPRLHPTPV 671
+ ++S L + Y+ S P +PT S P SSTP PTP
Sbjct: 1821 -----------VNCSLSCTLEF--YNWSCPSTPSPTPTPSKSTPTPSKPSSTPS-KPTPG 1866
Query: 672 TPRWPEVP 679
T + PE P
Sbjct: 1867 T-KPPECP 1873
Score = 33.5 bits (75), Expect = 0.73
Identities = 55/242 (22%), Positives = 84/242 (34%), Gaps = 27/242 (11%)
Query: 488 GSTAEVREEIILTEAAAPTPSPV--PSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P +T+ V P +P +P T ++TT
Sbjct: 1514 GTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTT 1573
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQ----LPCMRNTHV---PSSSVTHRI 589
+ Q+ T L T TT +P S + P T V P+ + T
Sbjct: 1574 TVTPTPTPTGTQTPTTVLITTTTTMTPTPTPTSTKSTTVTPITTTTTVTATPTPTGTQTP 1633
Query: 590 PVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFN 649
+ P T + + G+ P S P T+ P P S P
Sbjct: 1634 TMIPISTTTTVTPTPT-PTTGSTGPPTHTSTAPIAELTTSNPPPESSTPQTSRSTSSPLT 1692
Query: 650 SPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRR 709
T+ L + P + T P P P+A T T+ H+ S+ P T R
Sbjct: 1693 ESTT----LLSTLPPAIEMTSTAP--PSTPTAPT--TTSGGHTLSPPPSTTTSPPGTPTR 1744
Query: 710 NS 711
+
Sbjct: 1745 GT 1746
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 43.5 bits (101), Expect = 7e-04
Identities = 47/217 (21%), Positives = 82/217 (37%), Gaps = 30/217 (13%)
Query: 478 NELMRAMKGEGSTAEVRE-----EIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVS 532
NE + + +G +RE E +L P + + SP + P P+ PV
Sbjct: 722 NEFILPSERDGFLRRIREIIQRVETLLKRDTGPMEAAEDTLSPQEEPA----PLPALPVP 777
Query: 533 NPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVY 592
P P L ++ +++ +W+ T +++ G+P N P + ++ P++
Sbjct: 778 LPDPSNEELQSSTSLEHRSWTAFSTSSSSPGTPLSPG-------NPFSPGTPISPG-PIF 829
Query: 593 P------HREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQY 646
P H ++ + S N PHP S P PL P+ +
Sbjct: 830 PITSPPCHPSPSPFSPISSQVS-SNPSPHPTSSPLPFSSSTPEFPVPLSQCPW----SSL 884
Query: 647 PFNSPTSRMEPC--LMSSTPRLHPTPVTPRWPEVPSA 681
P SP + C + S+P P P T +P +A
Sbjct: 885 PTTSPPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAA 921
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 43.1 bits (100), Expect = 0.001
Identities = 54/237 (22%), Positives = 85/237 (35%), Gaps = 33/237 (13%)
Query: 487 EGSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTT 544
E T I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 1891 ENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTT 1950
Query: 545 GAM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPH 594
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 1951 TTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPT 2006
Query: 595 REEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSR 654
+ T + P P +Q P P ++ P +PT
Sbjct: 2007 GTQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGT 2054
Query: 655 MEPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2055 QTPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2110
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2053 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2112
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2113 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2168
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 2169 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2216
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2217 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2271
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2214 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2273
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2274 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2329
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 2330 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2377
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2378 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2432
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2375 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2434
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2435 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2490
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 2491 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2538
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2539 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2593
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2536 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2595
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2596 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2651
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 2652 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2699
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2700 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2754
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2697 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2756
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2757 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2812
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 2813 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 2860
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 2861 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 2915
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 2858 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 2917
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 2918 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 2973
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 2974 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3021
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3022 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3076
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3019 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3078
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3079 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3134
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 3135 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3182
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3183 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3237
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3180 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3239
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3240 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3295
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 3296 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3343
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3344 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3398
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3341 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3400
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3401 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3456
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 3457 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3504
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3505 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3559
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3502 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3561
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3562 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3617
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 3618 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3665
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3666 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3720
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3663 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3722
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3723 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3778
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 3779 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3826
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3827 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 3881
Score = 42.4 bits (98), Expect = 0.002
Identities = 53/236 (22%), Positives = 85/236 (36%), Gaps = 33/236 (13%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3824 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 3883
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 3884 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 3939
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 3940 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 3987
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HSARYGNSSDMYTPLTT 707
P +++T + PTP TP + P+ T+ +V G + TP+TT
Sbjct: 3988 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITT 4042
Score = 39.7 bits (91), Expect = 0.010
Identities = 48/217 (22%), Positives = 78/217 (35%), Gaps = 31/217 (14%)
Query: 488 GSTAEVREEIILTEAAAPTPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTG 545
G+ I T PTP+P + +P + T+ V P +P +P T ++TT
Sbjct: 3985 GTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTT 4044
Query: 546 AM---------QSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPV-YPHR 595
+ Q+ T + T TT +P Q P T P ++ T P P
Sbjct: 4045 TVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP----TTTPITTTTTVTPTPTPTG 4100
Query: 596 EEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRM 655
+ T + P P +Q P P ++ P +PT
Sbjct: 4101 TQTPTTTPITTTTTVTPTPTPTGTQTPTT------------TPITTTTTVTPTPTPTGTQ 4148
Query: 656 EPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV 690
P +++T + PTP TP + P+ T+ +V
Sbjct: 4149 TPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTV 4184
Score = 35.0 bits (79), Expect = 0.25
Identities = 43/202 (21%), Positives = 67/202 (33%), Gaps = 13/202 (6%)
Query: 506 TPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSP 565
TPSP + + T+ PP ++P++ P+ T TT T + T TT SP
Sbjct: 1483 TPSPPTTTTTTPPPTTTPSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTP-SP 1541
Query: 566 AENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALP 625
+ P T +P ++ P T P P + P+ P
Sbjct: 1542 PTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTT------------PSPPTTTTPSPP 1589
Query: 626 HDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCY 685
T + P P ++ T+ P TP T + P P T
Sbjct: 1590 TITTTTPPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTT 1649
Query: 686 TSPSVHSARYGNSSDMYTPLTT 707
T P + ++ P+TT
Sbjct: 1650 TPPPTTTPSPPTTTTPSPPITT 1671
Score = 34.7 bits (78), Expect = 0.33
Identities = 47/208 (22%), Positives = 72/208 (34%), Gaps = 20/208 (9%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT 559
T TPSP + +P+ + PPP++ PSP T +TT + T S T
Sbjct: 1571 TPPPTTTPSPPTTTTPSPPTITTTTPPPTTT---PSPPTT--TTTTPPPTTTPS---PPT 1622
Query: 560 TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQS 619
T +P ++ LP P ++ T P T P P +
Sbjct: 1623 TTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTT------------PSPPIT 1670
Query: 620 QYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVP 679
P T S P+ P ++ + T+ P ++TP TP P
Sbjct: 1671 TTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITTTTTPSSTTTPSPPPTTMTT 1730
Query: 680 SANTCYTSPSVHSARYGNSSDMYTPLTT 707
+ T SP + + +PLTT
Sbjct: 1731 PSPTTTPSPPTTTMTTLPPTTTSSPLTT 1758
Score = 34.7 bits (78), Expect = 0.33
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 29/188 (15%)
Query: 501 EAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTT 560
E + P P+ +P ++ + PP S ++P T +TTG+ + T S T TT
Sbjct: 4246 EMTSTAPPSTPT-APTTTSGGHTLSPPPSTTTSPPGTPTRGTTTGSSSAPTPSTVQTTTT 4304
Query: 561 AAGSPAENSQQLPCMRNT----HVPSSSVTHRI--PVYPHREEHGYTGSYNYGSYGNQHP 614
+A +P P + T PSS + + Y E Y G+Y Y
Sbjct: 4305 SAWTPTPTPLSTPSIIRTTGLRPYPSSVLICCVLNDTYYAPGEEVYNGTYGDTCYF---- 4360
Query: 615 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPT---SRMEPCLMSSTPRLHPTPV 671
+ ++S L + Y+ S P +PT S P SSTP PTP
Sbjct: 4361 -----------VNCSLSCTLEF--YNWSCPSTPSPTPTPSKSTPTPSKPSSTPS-KPTPG 4406
Query: 672 TPRWPEVP 679
T + PE P
Sbjct: 4407 T-KPPECP 4413
Score = 34.3 bits (77), Expect = 0.43
Identities = 45/206 (21%), Positives = 70/206 (33%), Gaps = 21/206 (10%)
Query: 506 TPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT----TA 561
T +P P+ +P+ T+ PPP++ S P +STT T T T T
Sbjct: 1429 TTTPPPTTTPSPPITTTTTPPPTTTPSPP------ISTTTTPPPTTTPSPPTTTPSPPTT 1482
Query: 562 AGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQY 621
SP + P T P ++ P+ P + P +
Sbjct: 1483 TPSPPTTTTTTPPPTTTPSPPTTT----PITPPASTTTLPPTTTPSPPTTTTTTPPPTTT 1538
Query: 622 PALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSA 681
P+ P T I+ P ++ P PT+ P P P+P T P P+
Sbjct: 1539 PSPPTTTPITPPTSTTTLPPTTTPSP--PPTTTTTP-----PPTTTPSPPTTTTPSPPTI 1591
Query: 682 NTCYTSPSVHSARYGNSSDMYTPLTT 707
T P+ + ++ P TT
Sbjct: 1592 TTTTPPPTTTPSPPTTTTTTPPPTTT 1617
Score = 32.3 bits (72), Expect = 1.6
Identities = 43/195 (22%), Positives = 70/195 (35%), Gaps = 23/195 (11%)
Query: 518 SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRN 577
+ T PP ++P++ + + TG T +T T TT +P Q P
Sbjct: 1888 TTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPIT-TTTTVTPTPTPTGTQTP---- 1942
Query: 578 THVPSSSVTHRIPV-YPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHY 636
T P ++ T P P + T + P P +Q P
Sbjct: 1943 TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTT------------ 1990
Query: 637 APYHRSSAQYPFNSPTSRMEPCL--MSSTPRLHPTPVTPRWPEVPSANTCYTSPSV--HS 692
P ++ P +PT P +++T + PTP TP + P+ T+ +V
Sbjct: 1991 TPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTP-TPTGTQTPTTTPITTTTTVTPTP 2049
Query: 693 ARYGNSSDMYTPLTT 707
G + TP+TT
Sbjct: 2050 TPTGTQTPTTTPITT 2064
Score = 30.8 bits (68), Expect = 4.7
Identities = 45/169 (26%), Positives = 67/169 (39%), Gaps = 18/169 (10%)
Query: 506 TPSPVPSFSPAKSATSVE-VPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGS 564
TPSP P+ +P+ TS +P P + PSP T +TT + T S T TT +
Sbjct: 1398 TPSP-PTTTPSPPPTSTTTLP----PTTTPSPPTT--TTTTPPPTTTPSPPITTTT---T 1447
Query: 565 PAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPAL 624
P + P + T P + T P P T + + + P P + P+
Sbjct: 1448 PPPTTTPSPPISTTTTPPPTTT---PSPPTTTPSPPTTTPSPPTTTTTTPPPTTT--PSP 1502
Query: 625 PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTP 673
P T I+ P ++ P + T+ P S P TP+TP
Sbjct: 1503 PTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPT--TTPITP 1549
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 42.7 bits (99), Expect = 0.001
Identities = 57/212 (26%), Positives = 79/212 (37%), Gaps = 35/212 (16%)
Query: 484 MKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 543
+K GST T + +PS SFS AK++TS+ P S PE T ST
Sbjct: 1883 IKATGSTHTAPPMTPTTSGTSQSPS---SFSTAKTSTSL----PYHTSSTHHPEVTPTST 1935
Query: 544 TGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGS 603
T +T T T T A + + +S +LP TH P TGS
Sbjct: 1936 TNITPKHT--STGTRTPVAHTTSASSSRLPTPFTTHSPP------------------TGS 1975
Query: 604 YNYGSYGNQHPHPMQ--SQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMS 661
+ S G Q + YP P + P H P+ +S P M+
Sbjct: 1976 SPFSSTGPMTATSFQTTTTYPT-PSHPQTTLPTHVPPF-STSLVTPSTHTVIITTHTQMA 2033
Query: 662 STPRLHPTPVTPRWPEVPSANTCYTSPSVHSA 693
++ +H TP VP T + S H+A
Sbjct: 2034 TSASIHSTPT----GTVPPPTTLKATGSTHTA 2061
Score = 42.0 bits (97), Expect = 0.002
Identities = 52/202 (25%), Positives = 78/202 (38%), Gaps = 26/202 (12%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 558
+T + T SFS AK++TS+ S S PE T STT ++T T T
Sbjct: 1726 MTVTTSGTSQSRSSFSTAKTSTSLH----SHTSSTHHPEVTSTSTTSITPNHT--STGTR 1779
Query: 559 TTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQ 618
T A + + S +LP TH P + T P+ TG S+ +P
Sbjct: 1780 TPVAHTTSATSSRLPTPFTTHSPPTGTT---PI-------SSTGPVTATSFQTTTTYPT- 1828
Query: 619 SQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLH--PTPVTPRWP 676
P+ PH T P H P +S P M+++ +H PT P
Sbjct: 1829 ---PSHPHTTL---PTH-VPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPT 1881
Query: 677 EVPSANTCYTSPSVHSARYGNS 698
+ + + +T+P + G S
Sbjct: 1882 TIKATGSTHTAPPMTPTTSGTS 1903
Score = 37.7 bits (86), Expect = 0.038
Identities = 56/206 (27%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 518 SATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRN 577
SATS +P P + S P+ T +S+TG + + ++ T T T P+ LP
Sbjct: 1787 SATSSRLPTPFTTHSPPTGT-TPISSTGPVTATSFQTTTTYPT----PSHPHTTLP---- 1837
Query: 578 THVPSSSV------THRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQ---SQYPALPHDT 628
THVPS S TH + + H + ++ + P ++ S + A P
Sbjct: 1838 THVPSFSTSLVTPSTHTVIIPTHTQMATSASIHSMPTGTIPPPTTIKATGSTHTAPPMTP 1897
Query: 629 AISG----PLHYA--------PYHRSSAQYPFNSPTS--RMEPCLMSS---TPRLH---- 667
SG P ++ PYH SS +P +PTS + P S+ TP H
Sbjct: 1898 TTSGTSQSPSSFSTAKTSTSLPYHTSSTHHPEVTPTSTTNITPKHTSTGTRTPVAHTTSA 1957
Query: 668 -----PTPVTPRWPEVPSANTCYTSP 688
PTP T P S+ T P
Sbjct: 1958 SSSRLPTPFTTHSPPTGSSPFSSTGP 1983
Score = 33.1 bits (74), Expect = 0.95
Identities = 57/228 (25%), Positives = 86/228 (37%), Gaps = 29/228 (12%)
Query: 484 MKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLST 543
+K GST + T T + S + AK++TS+ S S E T ST
Sbjct: 1659 LKATGSTHTAPTMTLTTSG---TSQALSSLNTAKTSTSLH----SHTSSTHHAEATSTST 1711
Query: 544 TGAMQSYTWSLT--YTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYT 601
T + T + T TVTT+ S + +S + +S TH +P T
Sbjct: 1712 TNITPNPTSTGTPPMTVTTSGTSQSRSSFSTAKTSTSLHSHTSSTH----HPEVTSTSTT 1767
Query: 602 G-SYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLM 660
+ N+ S G + P + H T+ + P+ S +P S P
Sbjct: 1768 SITPNHTSTGTRTP---------VAHTTSATSSRLPTPFTTHSPPTG-TTPISSTGPVTA 1817
Query: 661 SS--TPRLHPTPVTPRWP---EVPSANTCYTSPSVHSARYGNSSDMYT 703
+S T +PTP P VPS +T +PS H+ + M T
Sbjct: 1818 TSFQTTTTYPTPSHPHTTLPTHVPSFSTSLVTPSTHTVIIPTHTQMAT 1865
Score = 32.7 bits (73), Expect = 1.2
Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 20/208 (9%)
Query: 503 AAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAA 562
+ PT + P + + ++ PP + S S ++ ST A S+ S ++ ++
Sbjct: 2040 STPTGTVPPPTTLKATGSTHTAPPMTVTTSGTSQTHSSFSTATASSSFISSSSWLPQNSS 2099
Query: 563 GSPAEN--SQQLPCMRNTHVPSSSVTHRIPVY-PHREEHGYTGSYNYGSYGNQHPHPMQS 619
P + + QLP + + P S+ + P SY + H P S
Sbjct: 2100 SRPPSSPITTQLPHLSSATTPVSTTNQLSSSFSPSPSAPSTVSSY----VPSSHSSPQTS 2155
Query: 620 QYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVP 679
+ +S P+H ++ S +S+ P +P +P P
Sbjct: 2156 SPSVGTSSSFVSAPVH-------------STTLSSGSHSSLSTHPTTASVSASPLFPSSP 2202
Query: 680 SANTCYTSPSVHSARYGNSSDMYTPLTT 707
+A+T + H+ + P++T
Sbjct: 2203 AASTTIRATLPHTISSPFTLSALLPIST 2230
Score = 31.6 bits (70), Expect = 2.8
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 496 EIILTEAAAPTPSPVPS-----FSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSY 550
E+ T TP+P + + SATS PPP + +P + S+TG M +
Sbjct: 1536 EVTPTSTTTITPNPTSTRTRTPVAHTNSATSSRPPPPFT-THSPPTGSSPFSSTGPMTAT 1594
Query: 551 TWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVT 586
++ T T T P+ LP THVP S +
Sbjct: 1595 SFKTTTTYPT----PSHPQTTLP----THVPPFSTS 1622
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 42.7 bits (99), Expect = 0.001
Identities = 55/232 (23%), Positives = 87/232 (37%), Gaps = 30/232 (12%)
Query: 490 TAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTG-AMQ 548
T R E T A+ +P S + +A++V PS+ VS S T STTG ++
Sbjct: 397 TTSARMESQATSASINNSNPSTSEQASDTASAVTSSQPST-VSETSATLTSNSTTGTSIG 455
Query: 549 SYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHR---EEHGYTGSYN 605
+ T + T G PA C +++ SS H +PH ++HG+
Sbjct: 456 DDSRRTTSSAVTETGPPAMPRLPSCCPQHSPCGGSSQNHHALGHPHTSCFQQHGH----- 510
Query: 606 YGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPC--LMSST 663
+ H H + +PA+P + S P P P PC SS
Sbjct: 511 ---HFQHHHHHHHTPHPAVPVSPSFSDP-----------ACPVERPPQVQAPCGANSSSG 556
Query: 664 PRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEH 715
H P V +N+ S S ++ D P+++ R + + H
Sbjct: 557 TSYHEQQALP----VDLSNSGIRSHGSGSFHGASAFDPCCPVSSSRAAIFGH 604
>gi|30581117 SRY (sex determining region Y)-box 30 isoform a [Homo
sapiens]
Length = 753
Score = 40.8 bits (94), Expect = 0.005
Identities = 47/169 (27%), Positives = 69/169 (40%), Gaps = 12/169 (7%)
Query: 492 EVREEIILTEAAAPTPSPVPSFSPA-KSATSVEVPPPSSPV--SNPSPEYTGLSTTGAMQ 548
E I L A +PSPV F P+ SA V V PS PV + P +TG S T Q
Sbjct: 464 ETSPAIQLPTPAVQSPSPVTLFQPSVSSAAQVAVQDPSLPVYPALPPQRFTGPSQTDTHQ 523
Query: 549 SYTWSLTYTVTTAAGSPAENSQQLPCMRNT-HVPSSSVTHRIPVYPHREEHGYTGSYNYG 607
++ T+TV E++ ++ +T H ++ T + P RE +
Sbjct: 524 LHS-EATHTVKQPTPVSLESANRISSSASTAHARFATST----IQPPREYSSVSPCPRSA 578
Query: 608 --SYGNQHPHPMQSQYPALPHDTAISG-PLHYAPYHRSSAQYPFNSPTS 653
+ PHP Q P L H + G P ++ +H P P+S
Sbjct: 579 PIPQASPIPHPHVYQPPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSS 627
>gi|109637784 GLIS family zinc finger 3 isoform a [Homo sapiens]
Length = 930
Score = 39.7 bits (91), Expect = 0.010
Identities = 55/216 (25%), Positives = 74/216 (34%), Gaps = 28/216 (12%)
Query: 500 TEAAAPTPSP----VPSFSP---AKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTW 552
T +P P P P FS ++S T+ PP PVS+PSP G + G+ + +
Sbjct: 696 TVGRSPGPGPDLYSAPIFSSNYSSRSGTAAGAVPPPHPVSHPSP---GHNVQGSPHNPSS 752
Query: 553 SLTYTVTTAAG----SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGS 608
L AG +P+ S R PSS + P Y + + SY
Sbjct: 753 QLPPLTAVDAGAERFAPSAPSPHHISPRRVPAPSSILQRTQPPYTQQPSGSHLKSY---- 808
Query: 609 YGNQHPHPMQSQYPALPHDTAISG------PLHYAPYHRSSAQYPFNSPTSRMEPCLMSS 662
P S P H G P HY R S E CL+ +
Sbjct: 809 ----QPETNSSFQPNGIHVHGFYGQLQKFCPPHYPDSQRIVPPVSSCSVVPSFEDCLVPT 864
Query: 663 TPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNS 698
+ V R S T Y PS S+ +G S
Sbjct: 865 SMGQASFDVFHRAFSTHSGITVYDLPSSSSSLFGES 900
>gi|109637782 GLIS family zinc finger 3 isoform b [Homo sapiens]
Length = 775
Score = 39.7 bits (91), Expect = 0.010
Identities = 55/216 (25%), Positives = 74/216 (34%), Gaps = 28/216 (12%)
Query: 500 TEAAAPTPSP----VPSFSP---AKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTW 552
T +P P P P FS ++S T+ PP PVS+PSP G + G+ + +
Sbjct: 541 TVGRSPGPGPDLYSAPIFSSNYSSRSGTAAGAVPPPHPVSHPSP---GHNVQGSPHNPSS 597
Query: 553 SLTYTVTTAAG----SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGS 608
L AG +P+ S R PSS + P Y + + SY
Sbjct: 598 QLPPLTAVDAGAERFAPSAPSPHHISPRRVPAPSSILQRTQPPYTQQPSGSHLKSY---- 653
Query: 609 YGNQHPHPMQSQYPALPHDTAISG------PLHYAPYHRSSAQYPFNSPTSRMEPCLMSS 662
P S P H G P HY R S E CL+ +
Sbjct: 654 ----QPETNSSFQPNGIHVHGFYGQLQKFCPPHYPDSQRIVPPVSSCSVVPSFEDCLVPT 709
Query: 663 TPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNS 698
+ V R S T Y PS S+ +G S
Sbjct: 710 SMGQASFDVFHRAFSTHSGITVYDLPSSSSSLFGES 745
>gi|56549668 AT rich interactive domain 2 (ARID, RFX-like) [Homo
sapiens]
Length = 1835
Score = 39.7 bits (91), Expect = 0.010
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 63 QWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPV-NAASFGKIIRQQFPQLTTRRL-- 119
QWL ++E+ + R+ +Y YL C K + + F K +R FP T +R+
Sbjct: 526 QWLNAHFEVNPDCSVSRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVED 585
Query: 120 -GTRGQSKYHYYGI 132
+ GQ+ H G+
Sbjct: 586 SSSNGQAHIHVVGV 599
>gi|169211436 PREDICTED: hypothetical protein [Homo sapiens]
Length = 280
Score = 38.9 bits (89), Expect = 0.017
Identities = 60/218 (27%), Positives = 82/218 (37%), Gaps = 21/218 (9%)
Query: 499 LTEAAAPT--PSPVPSFSPAKSATSVEVPPPSSPVSNPS--PEYTGLSTTGAMQSYTWSL 554
LT ++ PT PS P+ +P + T + P S+P PS P T ST S T +L
Sbjct: 54 LTPSSPPTLTPSNTPTLTPCSTPT---LTPCSTPTLTPSNTPTLTPSSTPTLTPSSTPTL 110
Query: 555 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHP 614
T + T +P+ P T PSS+ P T S + P
Sbjct: 111 TPSSTPTL-TPSSTPTLTPSSTPTLTPSST-----PTLTRSSTPTLTPSSTPTLTPSSTP 164
Query: 615 HPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHP----T 669
S P L P T P RSS S T + P SSTP L P T
Sbjct: 165 TLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSTPTLTP---SSTPTLTPSNTPT 221
Query: 670 PVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
+ P + ++T +PS +S+ TP +T
Sbjct: 222 LIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTPSST 259
Score = 34.3 bits (77), Expect = 0.43
Identities = 47/177 (26%), Positives = 68/177 (38%), Gaps = 11/177 (6%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPS--PEYTGLSTTGAMQSYTWSLTY 556
T + TP+ PS +P + +S + P S+P PS P T ST +S T +LT
Sbjct: 93 TLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTRSSTPTLTP 152
Query: 557 TVT---TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQH 613
+ T T + +P P + + P+ + + R P+ T S +
Sbjct: 153 SSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSR-PILTRSSTPTLTPSSTPTLTPSST 211
Query: 614 PHPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT 669
P S P L P T P SS S T + P SSTP L P+
Sbjct: 212 PTLTPSNTPTLIPSSTPTLTPSSTPTLTPSSRPTLTRSSTPTLTP---SSTPTLTPS 265
Score = 31.6 bits (70), Expect = 2.8
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)
Query: 489 STAEVREEIILTEAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPS--PEYTGLSTTG 545
ST + T + TP+ PS +P + +S + P S+P PS P T ST
Sbjct: 138 STPTLTRSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPT 197
Query: 546 AMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVT 586
S T +LT + +T +P+ +P T PSS+ T
Sbjct: 198 LTPSSTPTLTPS-STPTLTPSNTPTLIPSSTPTLTPSSTPT 237
>gi|167736355 mucin 4 isoform a [Homo sapiens]
Length = 5284
Score = 38.9 bits (89), Expect = 0.017
Identities = 67/244 (27%), Positives = 94/244 (38%), Gaps = 39/244 (15%)
Query: 506 TPSPVPSFSPAKS--ATSVEVPPPSS---------PVSNPSPEYTGLST----TGAMQSY 550
TP PV S A + AT + V PSS PV++PS TG +T TG +
Sbjct: 3695 TPLPVTDASSASTGHATPLPVTIPSSVSTGDTMPLPVTSPSSASTGHATPLPVTGLSSAS 3754
Query: 551 TWSLT-YTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSY 609
T T VT + + ++ LP + +T S+ T R+PV + S
Sbjct: 3755 TGDTTPLPVTDTSSASTRHATPLP-VTDTSSASTDDTTRLPV----------TDVSSAST 3803
Query: 610 GNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSP-TSRMEPCLMSSTPRLHP 668
G+ P P+ S A DT PL S + + P TSR +ST P
Sbjct: 3804 GHATPLPVTSTSSASTGDTT---PLPVTDTSSVSTGHATSLPVTSRSS----ASTGHATP 3856
Query: 669 TPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGE 728
PVT + S +T + +P ++ S+ TPL S P
Sbjct: 3857 LPVT----DTSSVSTGHATPLPVTSTSSVSTGHATPLPVTSPSSASTGHATPVPVTSTSS 3912
Query: 729 ASTG 732
ASTG
Sbjct: 3913 ASTG 3916
Score = 37.4 bits (85), Expect = 0.050
Identities = 60/246 (24%), Positives = 90/246 (36%), Gaps = 23/246 (9%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTG----LSTTGAMQSYTWSL 554
L+ A+ P+P SP+ ++T P P + S+ S +T S + A +T L
Sbjct: 1526 LSSASTGDTMPLPVTSPSSASTGDTTPLPVTDASSVSTGHTTPLPVTSPSSASTGHTTPL 1585
Query: 555 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGS------YNYGS 608
T T++A ++ LP T S+S H P+ TG N S
Sbjct: 1586 PVTDTSSASK--GDTTPLPV---TSPSSASTGHTTPLPVTDTSSASTGDTTPLPVTNASS 1640
Query: 609 YGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHP 668
H P+ P+ T + PL +S + P + + T RL
Sbjct: 1641 LSTGHATPLHVTSPS-SASTGHATPLPVTSTSSASTGHATPLPVTGLSSATTDDTTRL-- 1697
Query: 669 TPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGE 728
PVT +V SA+T +P ++ S+ TPL S P
Sbjct: 1698 -PVT----DVSSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHASPLLVTDASS 1752
Query: 729 ASTGWA 734
ASTG A
Sbjct: 1753 ASTGQA 1758
Score = 36.2 bits (82), Expect = 0.11
Identities = 62/252 (24%), Positives = 94/252 (37%), Gaps = 39/252 (15%)
Query: 506 TPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 563
TP PV S + ATS+ V PS+ + + T+ A SL T T++
Sbjct: 1215 TPLPVTDASSVSTDHATSLPVTIPSAASTGHTTPLPVTDTSSASTGQATSLLVTDTSSVS 1274
Query: 564 SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG--------SYNYGSYGNQHPH 615
+ ++ LP T S+S H P++ TG S + S G+ P
Sbjct: 1275 T--GDTTPLPV---TSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMPL 1329
Query: 616 PMQSQYPALPHDTAISGPL-----------HYAPYHRSSAQYPFNSPTSRMEPCLMSSTP 664
P+ S A DT PL H P H + A + + +SS
Sbjct: 1330 PVTSPSSASTGDTT---PLPVTDASSVSTGHTTPLHVTDASSASTGQATPLPVTSLSSVS 1386
Query: 665 RLHPTPVTPRWPEVPSANTCYTSP----SVHSARYGNSSDMYTPLTTRRNSEYEHMQHFP 720
TP+ P SA+T + +P SA G+++ + P+T + +H P
Sbjct: 1387 TGDTTPLPVTSPS--SASTGHATPLLVTDTSSASTGHATPL--PVTDASSVSTDHATSLP 1442
Query: 721 GFAYINGEASTG 732
I ASTG
Sbjct: 1443 --VTIPSAASTG 1452
Score = 33.9 bits (76), Expect = 0.56
Identities = 63/251 (25%), Positives = 90/251 (35%), Gaps = 33/251 (13%)
Query: 506 TPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 563
TP PV S + ATS+ V PS+ + + T+ A SL T T++
Sbjct: 1423 TPLPVTDASSVSTDHATSLPVTIPSAASTGHTTPLPVTDTSSASTGQATSLLVTDTSSVS 1482
Query: 564 SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG--------SYNYGSYGNQHPH 615
+ ++ LP T S+S H P++ TG S + S G+ P
Sbjct: 1483 T--GDTTPLPV---TSTSSASTGHVTPLHVTSPSSASTGHATPLPVTSLSSASTGDTMPL 1537
Query: 616 PMQSQYPALPHDTAISGPL-----------HYAPYHRSSAQYPFNSPTSRMEPCLMSSTP 664
P+ S A DT PL H P +S P ++ T P ++ T
Sbjct: 1538 PVTSPSSASTGDTT---PLPVTDASSVSTGHTTPLPVTS---PSSASTGHTTPLPVTDTS 1591
Query: 665 RLHPTPVTPRWPEVP-SANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFA 723
TP P SA+T +T+P + S+ TPL S P
Sbjct: 1592 SASKGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGDTTPLPVTNASSLSTGHATPLHV 1651
Query: 724 YINGEASTGWA 734
ASTG A
Sbjct: 1652 TSPSSASTGHA 1662
Score = 33.5 bits (75), Expect = 0.73
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 49/235 (20%)
Query: 506 TPSPVPSFSPAKS--ATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVTTAAG 563
TP PV S A + ATS+ V SS + + T+ A + L T T++A
Sbjct: 2815 TPLPVTDTSSASTGHATSLPVTDTSSASTGHATPLPDTDTSSASTGHATLLPVTDTSSAS 2874
Query: 564 SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPA 623
++ LP T S S H P+ + S + S G+ P P+
Sbjct: 2875 --IGHATSLPV---TDTSSISTGHATPL--------HVTSPSSASTGHATPLPVT----- 2916
Query: 624 LPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANT 683
DT+ + H P H SP+S +ST P PVT + SA+T
Sbjct: 2917 ---DTSSASTGHANPLH-------VTSPSS-------ASTGHATPLPVT----DTSSAST 2955
Query: 684 CYTSP----SVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWA 734
+ +P S+ S G+++ + P+T+ ++ H P ASTG A
Sbjct: 2956 GHATPLPVTSLSSVSTGDTTPL--PVTSPSSASTGHTTPLP--VTDTSSASTGQA 3006
Score = 33.5 bits (75), Expect = 0.73
Identities = 65/253 (25%), Positives = 94/253 (37%), Gaps = 43/253 (16%)
Query: 498 ILTEAAAPTPSPVPSFSPAKSATSVEVPPPSS---------PVSNPSPEYTG----LSTT 544
+ T P P PS + ATS+ V SS PV++ S YTG L T
Sbjct: 3097 VSTGDTTPLPVTSPSSASTGHATSLPVTDTSSASTGDTTSLPVTDTSSAYTGDTTSLPVT 3156
Query: 545 GAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSY 604
S T T + T S P + T S+S H P+ + S
Sbjct: 3157 DTSSSSTGDTTPLLVTETSS-VSTGHATPLL-VTDASSASTGHATPL--------HVTSP 3206
Query: 605 NYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMS--S 662
+ S G+ P P+ DT+ H P + T+R+ +S S
Sbjct: 3207 SSASTGDTTPVPVT--------DTSSVSTGHATPLPVTGLSSASTGDTTRLPVTDISSAS 3258
Query: 663 TPRLHPTPVTPRWPEVPSANTC---YTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHF 719
T + P PVT V + +T TSPS SA G+++ + P+T+ ++ H
Sbjct: 3259 TGQATPLPVT-NTSSVSTGDTMPLPVTSPS--SASTGHATPL--PVTSTSSASTGHATPV 3313
Query: 720 PGFAYINGEASTG 732
P ASTG
Sbjct: 3314 P--VTSTSSASTG 3324
Score = 32.7 bits (73), Expect = 1.2
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 43/237 (18%)
Query: 508 SPVPSFSPAKSATSVEVPPPSSPVSNPSPEY-TGL---STTGAMQSYTWSLTYTVTTAAG 563
+P+P SP+ ++T P P + S+ S + T L T+ A + SL T T++A
Sbjct: 2127 TPLPVTSPSSASTGDTTPLPVTDTSSVSTGHATSLPVTDTSSASTGHATSLPVTDTSSAS 2186
Query: 564 ------------SPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTG--------S 603
S A Q P + T S+S H IP+ TG S
Sbjct: 2187 TGHATPLPVTDTSSASTGQATP-LPVTSPSSASTGHAIPLLVTDTSSASTGQATPLPVTS 2245
Query: 604 YNYGSYGNQHPHPM-QSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSS 662
+ S G+ P P+ + + H T++ + + P SP+S +S
Sbjct: 2246 LSSASTGDTTPLPVTDASSVSTGHATSLPVTSLSSVSTGDTTPLPVTSPSS-------AS 2298
Query: 663 TPRLHPTPVTPRWPEVPSANTCYTSP----SVHSARYGNSSDMYTPLTTRRNSEYEH 715
T P VT + SA+T + +P S+ SA G+++ + P+T+ ++ H
Sbjct: 2299 TGHATPLHVT----DASSASTGHATPLPVTSLSSASTGDTTPL--PVTSPSSASTGH 2349
Score = 32.0 bits (71), Expect = 2.1
Identities = 55/240 (22%), Positives = 91/240 (37%), Gaps = 37/240 (15%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP-EYTGL---STTGAMQSYTWSL 554
L+ + +P+P SP+ ++T P P + S+ S + T L ST+ A T L
Sbjct: 2966 LSSVSTGDTTPLPVTSPSSASTGHTTPLPVTDTSSASTGQATALPVTSTSSASTGDTTPL 3025
Query: 555 TYTVTTAAGS------PAENSQQLPCMRNTHVP-----SSSVTHRIPVYPHREEHGYTG- 602
T T++A + P + + T +P S+S H P+ TG
Sbjct: 3026 PVTDTSSASTGQATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPLLVTDASSASTGQ 3085
Query: 603 -------SYNYGSYGNQHPHPMQS----------QYPALPHDTAISGPLHYAPYHRSSAQ 645
S + S G+ P P+ S P +A +G P +S+
Sbjct: 3086 ATPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATSLPVTDTSSASTGDTTSLPVTDTSSA 3145
Query: 646 YPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPL 705
Y ++ + + SST P VT E S +T + +P + + S+ TPL
Sbjct: 3146 YTGDTTSLPVTDTSSSSTGDTTPLLVT----ETSSVSTGHATPLLVTDASSASTGHATPL 3201
Score = 31.2 bits (69), Expect = 3.6
Identities = 66/282 (23%), Positives = 94/282 (33%), Gaps = 35/282 (12%)
Query: 474 QERANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSN 533
QE A A T+ + I L A T S VP P S TS + P +
Sbjct: 899 QETAAISRMAQTQRTRTSRGSDTISLASQATDTFSTVPPTPP--SITSTGLTSPQTETHT 956
Query: 534 PSPEYTGLSTTGAMQSYTWSLTYT--------------VTTAAGSPAENSQQLPCMRNTH 579
SP +G + T A+ S L T VT A+ ++ LP +
Sbjct: 957 LSPSGSGKTFTTALISNATPLPVTYASSASTGHTTPLHVTDASSVSTGHATPLPVTSPSS 1016
Query: 580 VPSSSVTHRIPVYPHREEHGY-----TGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPL 634
V + T E G+ S++ S G+ P P+ DT+ +
Sbjct: 1017 VSTGHTTPLPVTDTSSESTGHVTPLPVTSFSSASTGDSTPLPVT--------DTSSASTG 1068
Query: 635 HYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPT--PVTPRWPEVPSANTCYTSPSVHS 692
H P +S T+ + SS H T PVT + S +T +T+P +
Sbjct: 1069 HVTPLPVTSLSSASTGDTTPLPVTDTSSASTGHATSLPVT----DTSSVSTGHTTPLPVT 1124
Query: 693 ARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWA 734
S+ T L S P ASTG A
Sbjct: 1125 DTSSASTGHATSLPVTDTSSVSTGHTTPLHVTDASSASTGQA 1166
Score = 31.2 bits (69), Expect = 3.6
Identities = 54/239 (22%), Positives = 88/239 (36%), Gaps = 13/239 (5%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEY-TGLSTTGAMQSYTWSLT-Y 556
++ A+ +P+P S + ++T P P + S+ S + T L T A T T
Sbjct: 2438 VSSASTGHATPLPVTSTSSASTGDTTPLPGTDTSSVSTGHTTPLLVTDASSVSTGDTTRL 2497
Query: 557 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHP 616
VT+ + + ++ LP T PS+S P+ P + + +
Sbjct: 2498 PVTSPSSASTGHTTPLPV---TDTPSASTGDTTPL-PVTNASSLSTRHATSLHVTSPSSA 2553
Query: 617 MQSQYPALP-HDTAISGPLHYAPYHRSSAQYPFNSPTSRM--EPCLMSSTPRLHPTPVTP 673
+LP DT+ + H P +S T+ + +ST + P PVT
Sbjct: 2554 STGHATSLPVTDTSAASTGHATPLPVTSTSSASTGDTTPLPVTDTYSASTGQATPLPVT- 2612
Query: 674 RWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTG 732
+ SA+T T+P + S+ TPL S P ASTG
Sbjct: 2613 ---DTSSASTGDTTPLPVTDTSSASTGHATPLPVTNTSSVSTGHATPLHVTSPSSASTG 2668
Score = 30.4 bits (67), Expect = 6.1
Identities = 54/237 (22%), Positives = 83/237 (35%), Gaps = 21/237 (8%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP-EYTGLSTTGAMQSYTWSLTYT 557
L+ A+ +P+P + ++T + P P + +S+ S + T L T + T T
Sbjct: 2022 LSSASTGDTTPLPVTDTSSASTGQDTPLPVTSLSSVSTGDTTPLPVTSPSSASTGHATPL 2081
Query: 558 VTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPM 617
+ T A S + H S VT V + + S G+ P P+
Sbjct: 2082 LVTDASS----------VSTGHATSLLVTDASSVSTGHATALHVTDASSLSTGDTTPLPV 2131
Query: 618 QSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPE 677
S A DT PL S + + P + +ST PVT +
Sbjct: 2132 TSPSSASTGDTT---PLPVTDTSSVSTGHATSLPVTDTS---SASTGHATSLPVT----D 2181
Query: 678 VPSANTCYTSPSVHSARYGNSSDMYTPLTTRRNSEYEHMQHFPGFAYINGEASTGWA 734
SA+T + +P + S+ TPL S P ASTG A
Sbjct: 2182 TSSASTGHATPLPVTDTSSASTGQATPLPVTSPSSASTGHAIPLLVTDTSSASTGQA 2238
>gi|20070107 orthodenticle homeobox 1 [Homo sapiens]
Length = 354
Score = 38.5 bits (88), Expect = 0.023
Identities = 45/195 (23%), Positives = 66/195 (33%), Gaps = 26/195 (13%)
Query: 477 ANELMRAMKGEGSTAEVREEIILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSP 536
AN A G G + T AA+ SP S SP + SV VP P + SN S
Sbjct: 147 ANPAAAAAAGLGGNPVAAASSLSTPAASSIWSPA-SISPGSAPASVSVPEPLAAPSNTSC 205
Query: 537 EYTGLSTTGAMQSYTWSLTYTVTTAAGSPAENSQQLPCMRNTHVPSSSV-------THRI 589
++ A + ++ ++Y G Q P PSSS ++
Sbjct: 206 MQRSVAAGAATAAASYPMSY------GQGGSYGQGYP------TPSSSYFGGVDCSSYLA 253
Query: 590 PVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFN 649
P++ H H + G+ H HP H + S H+ +H Y +
Sbjct: 254 PMHSHHHPHQLSPMAPSSMAGHHHHHPHAH------HPLSQSSGHHHHHHHHHHQGYGGS 307
Query: 650 SPTSRMEPCLMSSTP 664
CL P
Sbjct: 308 GLAFNSADCLDYKEP 322
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 38.5 bits (88), Expect = 0.023
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 21/215 (9%)
Query: 497 IILTEAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPSPEYTGLST--TGAMQSYTWS 553
+ + EA+ + +PV S SP ++T V P P+ S P Y+ ST TG S T
Sbjct: 3058 VAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPV 3117
Query: 554 LTYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQH 613
+ ++T + +P + S P +T SS T P T + + GS +
Sbjct: 3118 TSSAISTLSTTPVDTS--TPVTTSTEAHSSPTTSEGTSMP-------TSTPSEGSTPLTY 3168
Query: 614 PHPMQSQYPALPHDTAISG-PLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVT 672
P+ + D+ +S P+ + +S + S T+ + +STP TP+T
Sbjct: 3169 -MPVSTMLVVSSEDSTLSATPVDTSTPVTTSTE--ATSSTTAEGTSIPTSTPSEGMTPLT 3225
Query: 673 PRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
VP +NT S S S D TPLTT
Sbjct: 3226 ----SVPVSNTPVAS-SEASILSTTPVDSNTPLTT 3255
Score = 35.0 bits (79), Expect = 0.25
Identities = 57/213 (26%), Positives = 86/213 (40%), Gaps = 24/213 (11%)
Query: 501 EAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPSPEYTGLST--TGAMQSYTWSLTYT 557
EA+ + +PV S SP ++T V P P+ S P+ Y+ T T S T T
Sbjct: 822 EASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTLVATSA 881
Query: 558 VTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPM 617
++T + +P + S P +T SS T P GS S + +
Sbjct: 882 ISTLSTTPVDTS--TPVTNSTEARSSPTTSEGTSMPTSTPG--EGSTPLTSMPDSTTPVV 937
Query: 618 QSQ---YPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPR 674
S+ A P DT S P+ +++ +SPT+ + +STP TP+T
Sbjct: 938 SSEARTLSATPVDT--STPV-------TTSTEATSSPTTAEGTSIPTSTPSEGTTPLT-- 986
Query: 675 WPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
P ++T + S S D TPLTT
Sbjct: 987 --STPVSHTLVAN-SEASTLSTTPVDSNTPLTT 1016
Score = 34.3 bits (77), Expect = 0.43
Identities = 52/218 (23%), Positives = 85/218 (38%), Gaps = 22/218 (10%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPP-----SSPVSNPSPEYTGLSTTGAMQSYTWSL 554
+EA+ + +PV S +P ++T PPP S P S PS T L T S T
Sbjct: 998 SEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTPSEGSTPL--TRMPVSTTMVA 1055
Query: 555 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHP 614
+ +T + +PA+ S P + SSS T P T +Y+ GS
Sbjct: 1056 SSETSTLSTTPADTS--TPVTTYSQASSSSTTADGTSMP-------TSTYSEGSTPLTSV 1106
Query: 615 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPR-----LHPT 669
P+ ++ + +S +++ +SPT+ + +S P L
Sbjct: 1107 -PVSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASM 1165
Query: 670 PVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
PV+ ANT T+P + S++ +P T
Sbjct: 1166 PVSTTLVVSSEANTLSTTPVDSKTQVATSTEASSPPPT 1203
Score = 33.1 bits (74), Expect = 0.95
Identities = 46/207 (22%), Positives = 77/207 (37%), Gaps = 25/207 (12%)
Query: 498 ILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYT 557
++TE + P + +P S+T+ P + VS P T L+T S T + +++
Sbjct: 3928 VITEGSTPGTTIFIPSTPVTSSTADVFPATTGAVSTPVITSTELNTPSTSSSST-TTSFS 3986
Query: 558 VTTAAGSPAENSQQLPCMRNTHVPSSSVT-HRIPVYPHREEHGYTGSYN-YGSYGNQHPH 615
T +PA T P + VT P P G T S + + H
Sbjct: 3987 TTKEFTTPA---------MTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTS 4037
Query: 616 PMQSQYPALPHD--------TAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLH 667
+ P P T+ + P + P H S+ S T+ + + T R
Sbjct: 4038 TSVTTRPVTPSSESSRPSTITSHTIPPTFPPAHSSTPPTTSASSTTVNPEAVTTMTTRTK 4097
Query: 668 PTPVTPRWP-----EVPSANTCYTSPS 689
P+ T +P VP+ T ++P+
Sbjct: 4098 PSTRTTSFPTVTTTAVPTNTTIKSNPT 4124
Score = 32.3 bits (72), Expect = 1.6
Identities = 51/210 (24%), Positives = 75/210 (35%), Gaps = 47/210 (22%)
Query: 501 EAAAPTPSPVPSFSPAKSATSV-EVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTVT 559
EA+ + +PV S SP ++T V P P+ S P+ YT T S+T T
Sbjct: 1647 EASTLSTTPVDSNSPVITSTEVSSSPTPAEGTSMPTSTYTEGRTP------LTSITVRTT 1700
Query: 560 TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQS 619
A S P +T V +S+ P S
Sbjct: 1701 PVASSAISTLSTTPVDNSTPVTTST--------------------------EARSSPTTS 1734
Query: 620 QYPALPHDTAISG--PLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPE 677
+ ++P+ T G PL P +P E +S+TP TPVT E
Sbjct: 1735 EGTSMPNSTPSEGTTPLTSIPVS--------TTPVLSSEASTLSATPIDTSTPVTTS-TE 1785
Query: 678 VPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
S+ T S+ ++ S+ TPLT+
Sbjct: 1786 ATSSPTTAEGTSIPTS---TLSEGMTPLTS 1812
Score = 32.3 bits (72), Expect = 1.6
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPP-----SSPVSNPSPEYTGL-----STTGAMQS 549
+EA+ + +PV S +P ++T PP S P S PS T L STT S
Sbjct: 3237 SEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSMPTSTPSEGSTPLTSMPVSTTTVASS 3296
Query: 550 YTWSLTYT---VTTAAGSPAENSQQLPCMRNTHVPSSS 584
T +L+ T +T + ++ S P T +P+S+
Sbjct: 3297 ETSTLSTTPADTSTPVTTYSQASSSPPIADGTSMPTST 3334
Score = 32.0 bits (71), Expect = 2.1
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 497 IILTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTY 556
++ +EA + +PV S + ++T PPP++ V++ ST G + S+
Sbjct: 1172 VVSSEANTLSTTPVDSKTQVATSTEASSPPPTAEVTS-----MPTSTPGERSTPLTSMPV 1226
Query: 557 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIP 590
T A S A P +T V +S+ T P
Sbjct: 1227 RHTPVASSEASTLSTSPVDTSTPVTTSAETSSSP 1260
Score = 30.4 bits (67), Expect = 6.1
Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 15/96 (15%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPP-----PSSPVSNPSPEYTGLSTTGAMQSYTWSL 554
+EA+ + +PV S SP ++T+V P S +S PS T L+ S+
Sbjct: 1470 SEASTLSTTPVDSNSPVVTSTAVSSSPTPAEGTSIAISTPSEGSTALT----------SI 1519
Query: 555 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIP 590
+ TT A S + P + +T V + S P
Sbjct: 1520 PVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSP 1555
Score = 30.4 bits (67), Expect = 6.1
Identities = 56/224 (25%), Positives = 87/224 (38%), Gaps = 34/224 (15%)
Query: 500 TEA-AAPTPSP---VPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLT 555
TEA ++PT S +P+ +P++ +T P S PVS + ST A T +
Sbjct: 2196 TEARSSPTTSEGTSMPTSTPSEGST----PFTSMPVSTMPVVTSEASTLSATPVDTSTPV 2251
Query: 556 YTVTTAAGSPAENSQQLPCMRNTHVPSSSVTH-RIPVYPHREEHGYTGSYNYGSYGNQHP 614
T T A SP T +P+S+++ P+ H + +
Sbjct: 2252 TTSTEATSSPT-------TAEGTSIPTSTLSEGTTPLTSIPVSHTLVANSEVSTLSTT-- 2302
Query: 615 HPMQSQYPALPHDTAIS-GPLHYAPYHRSSAQYPFNSPTSRM----------EPCLMSST 663
P+ S P A S P +S N+P +RM E +S+T
Sbjct: 2303 -PVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLSTT 2361
Query: 664 PRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
P TPVT + + S+ T S+ ++ Y S TPLT+
Sbjct: 2362 PADTSTPVT-TYSQAGSSPTTADDTSMPTSTYSEGS---TPLTS 2401
Score = 30.4 bits (67), Expect = 6.1
Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 18/211 (8%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSN---PSPEYTGLSTTGAMQSYTWSLTY 556
TEA++P P+ + P +++ P PVS S E + LSTT A S
Sbjct: 2314 TEASSPPPTAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFETSTLSTTPA----DTSTPV 2369
Query: 557 TVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHP 616
T + AGS + +T+ S+ +PV +++ P
Sbjct: 2370 TTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVT 2429
Query: 617 MQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPVTPRWP 676
++ + P TA + +P S P S P + S L TPV P
Sbjct: 2430 TSTEASSSP-TTAEGTSIPTSP--PSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTP 2486
Query: 677 EVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
S +SP+ + D+ P++T
Sbjct: 2487 MTTSTEAS-SSPT-------TAEDIVVPIST 2509
Score = 30.0 bits (66), Expect = 8.0
Identities = 53/225 (23%), Positives = 77/225 (34%), Gaps = 46/225 (20%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPP-----SSPVSNPSPEYTGLSTTGAMQSYTWSL 554
+E + + +PV S +P ++T PPP S P S S T L T S T
Sbjct: 2294 SEVSTLSTTPVDSNTPFTTSTEASSPPPTAEGTSMPTSTSSEGNTPL--TRMPVSTTMVA 2351
Query: 555 TYTVTTAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHP 614
++ +T + +PA+ S P + SS T P T +Y+ GS
Sbjct: 2352 SFETSTLSTTPADTS--TPVTTYSQAGSSPTTADDTSMP-------TSTYSEGS------ 2396
Query: 615 HPMQSQYPALPHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCLMSSTPRLHPTPV--- 671
S P+ P S A +P P S+ PT
Sbjct: 2397 ------------TPLTSVPVSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGT 2444
Query: 672 -----TPRWPEVPSANTCYTSPSVHSARYGNSS----DMYTPLTT 707
P P A+ ++ V S+ G S D TP+TT
Sbjct: 2445 SIPTSPPSEGTTPLASMPVSTTPVVSSEAGTLSTTPVDTSTPMTT 2489
Score = 30.0 bits (66), Expect = 8.0
Identities = 62/255 (24%), Positives = 96/255 (37%), Gaps = 53/255 (20%)
Query: 497 IILTEAAAPTPSPVPSFSPAKSATSVEVPPPSS-----PVSNPSPEYTGL-----STTGA 546
++ +EA+ + +PV + +P ++T + P ++ P S+PS T L STT
Sbjct: 3352 VVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPV 3411
Query: 547 MQSYTWSLTYT-------VTT---AAGSP-------------AENSQQLPCMRNTHVP-S 582
+ S +L+ T VTT A+ SP +E S L M + P +
Sbjct: 3412 VSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGTSLPTSTTSEGSTPLSIMPLSTTPVA 3471
Query: 583 SSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPHPMQSQYPALPHDTAISG-------PLH 635
SS + P T S S P ++ ++P TA G P+
Sbjct: 3472 SSEASTLSTTPVDTSTPVTTSSPTNS------SPTTAEVTSMPTSTAGEGSTPLTNMPVS 3525
Query: 636 YAPYHRSSAQ----YPFNSPTSRMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVH 691
P S A P +S T SS+P VT PS + + +
Sbjct: 3526 TTPVASSEASTLSTTPVDSNTFVTSSSQASSSPA--TLQVTTMRMSTPSEGSSSLTTMLL 3583
Query: 692 SARYGNSSDMYTPLT 706
S+ Y SS+ TP T
Sbjct: 3584 SSTYVTSSEASTPST 3598
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 37.7 bits (86), Expect = 0.038
Identities = 56/226 (24%), Positives = 85/226 (37%), Gaps = 37/226 (16%)
Query: 505 PTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTW--SLTYTVTTAA 562
PT S P A +A + PPSSP + P ++ L GA +++ S + T
Sbjct: 438 PTSSQAPQKLDASAAAAPASLPPSSPAA-PIATFSLLPAGGAPTVFSFGSSSLKSSATVT 496
Query: 563 GSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYT----------GSYNYGSYG-- 610
G P S + P S +P P + T S+++GS G
Sbjct: 497 GEPPSYSSGSDSSKAAPGPGPSTFSFVP--PSKASLAPTPAASPVAPSAASFSFGSSGFK 554
Query: 611 ---NQHPHPMQS-----QYPALPHDTA---------ISGPLHYAPYHRSSAQYPFNSPTS 653
P P S P+ P T+ + P S + P + +S
Sbjct: 555 PTLESTPVPSVSAPNIAMKPSFPPSTSAVKVNLSEKFTAAATSTPVSSSQSAPPMSPFSS 614
Query: 654 RMEPCLMSSTPRLHPTPVTPRWPEVPSANTCYTSPSVHSARYGNSS 699
+P +S P HPTP++ VP ++ SPS SA+ G+SS
Sbjct: 615 ASKPA--ASGPLSHPTPLSAPPSSVPLKSSVLPSPSGRSAQ-GSSS 657
>gi|239751395 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.038
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 558
LT ++ PT +P P + + + T PP+ SN +P T +T S T +LT +
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSN-TPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 559 T---TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPH 615
T T + +P P + + P+ + + R P+ T S + P
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSR-PILTRSSTPTLTPSSTPTLTPSSTPT 191
Query: 616 PMQSQYPAL-----PHDTAISGPLHYAPYHR---SSAQYPFNSPTSRMEPCL-MSSTPRL 666
S P L P T S P P R + + P +P+SR P L SSTP L
Sbjct: 192 LTPSSTPTLTPSSRPILTRSSTPT-LTPSSRPILTPSSTPTLTPSSR--PILTRSSTPTL 248
Query: 667 HP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
P TP +TP P + +NT +PS +S+ TP +T
Sbjct: 249 TPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSST 293
Score = 30.8 bits (68), Expect = 4.7
Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVS-NPS------PEYTGLSTTGAMQSYTW 552
T + TP+ PS P + +S PSSP + PS P T T + + T
Sbjct: 17 TLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 76
Query: 553 SLTYTVT-----TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYG 607
S T T+T T + +P P + ++ P+ + ++ + P
Sbjct: 77 SSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTP-------------- 122
Query: 608 SYGNQHPHPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCL-MSSTPR 665
+ P S P L P T P RSS P +P+SR P L SSTP
Sbjct: 123 ---SNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST--PTLTPSSR--PILTRSSTPT 175
Query: 666 LHP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTP 704
L P TP +TP P + ++T +PS +S+ TP
Sbjct: 176 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP 218
>gi|239745904 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 306
Score = 37.7 bits (86), Expect = 0.038
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 21/225 (9%)
Query: 499 LTEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVSNPSPEYTGLSTTGAMQSYTWSLTYTV 558
LT ++ PT +P P + + + T PP+ SN +P T +T S T +LT +
Sbjct: 74 LTPSSTPTLTPQPILTRSSTPTLTPSSPPTLTPSN-TPTLTPSNTPTLTPSNTPTLTPSS 132
Query: 559 T---TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYGSYGNQHPH 615
T T + +P P + + P+ + + R P+ T S + P
Sbjct: 133 TPTLTPSSTPTLTPSSRPILTRSSTPTLTPSSR-PILTRSSTPTLTPSSTPTLTPSSTPT 191
Query: 616 PMQSQYPAL-----PHDTAISGPLHYAPYHR---SSAQYPFNSPTSRMEPCL-MSSTPRL 666
S P L P T S P P R + + P +P+SR P L SSTP L
Sbjct: 192 LTPSSTPTLTPSSRPILTRSSTPT-LTPSSRPILTPSSTPTLTPSSR--PILTRSSTPTL 248
Query: 667 HP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTPLTT 707
P TP +TP P + +NT +PS +S+ TP +T
Sbjct: 249 TPSSTPTLTPSNTPTLTPSNTPTLTPSNTPTLTPSSTPTLTPSST 293
Score = 30.8 bits (68), Expect = 4.7
Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 39/223 (17%)
Query: 500 TEAAAPTPSPVPSFSPAKSATSVEVPPPSSPVS-NPS------PEYTGLSTTGAMQSYTW 552
T + TP+ PS P + +S PSSP + PS P T T + + T
Sbjct: 17 TLTPSSTPTLTPSSQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTPSSTPTLTP 76
Query: 553 SLTYTVT-----TAAGSPAENSQQLPCMRNTHVPSSSVTHRIPVYPHREEHGYTGSYNYG 607
S T T+T T + +P P + ++ P+ + ++ + P
Sbjct: 77 SSTPTLTPQPILTRSSTPTLTPSSPPTLTPSNTPTLTPSNTPTLTP-------------- 122
Query: 608 SYGNQHPHPMQSQYPAL-PHDTAISGPLHYAPYHRSSAQYPFNSPTSRMEPCL-MSSTPR 665
+ P S P L P T P RSS P +P+SR P L SSTP
Sbjct: 123 ---SNTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSST--PTLTPSSR--PILTRSSTPT 175
Query: 666 LHP--TP-VTP-RWPEVPSANTCYTSPSVHSARYGNSSDMYTP 704
L P TP +TP P + ++T +PS +S+ TP
Sbjct: 176 LTPSSTPTLTPSSTPTLTPSSTPTLTPSSRPILTRSSTPTLTP 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,387,830
Number of Sequences: 37866
Number of extensions: 1508632
Number of successful extensions: 11010
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 272
Number of HSP's that attempted gapping in prelim test: 9152
Number of HSP's gapped (non-prelim): 1462
length of query: 735
length of database: 18,247,518
effective HSP length: 110
effective length of query: 625
effective length of database: 14,082,258
effective search space: 8801411250
effective search space used: 8801411250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.