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Search of human proteins with 47078240
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo
sapiens]
(491 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens] 969 0.0
gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens] 936 0.0
gi|7661914 proteasome (prosome, macropain) 26S subunit, non-ATPa... 98 1e-20
gi|219842262 COP9 constitutive photomorphogenic homolog subunit ... 46 9e-05
gi|4759264 COP9 constitutive photomorphogenic homolog subunit 2 ... 46 9e-05
gi|28872725 proteasome 26S non-ATPase subunit 11 [Homo sapiens] 39 0.008
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 33 0.45
gi|149944680 HAUS augmin-like complex, subunit 5 [Homo sapiens] 33 0.59
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 33 0.59
gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens] 32 1.0
gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens] 32 1.0
gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens] 32 1.3
gi|94681046 cyclin M4 [Homo sapiens] 32 1.3
gi|145309298 coiled-coil domain containing 16 [Homo sapiens] 32 1.3
gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens] 32 1.7
gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens] 32 1.7
gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens] 32 1.7
gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens] 32 1.7
gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens] 30 3.8
gi|46397390 pogo transposable element with ZNF domain isoform 1 ... 30 5.0
gi|46397394 pogo transposable element with ZNF domain isoform 2 ... 30 5.0
gi|221316695 multimerin 2 precursor [Homo sapiens] 30 5.0
gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens] 30 5.0
gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 6.5
gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 6.5
gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 6.5
gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens] 30 6.5
gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens] 30 6.5
gi|27477127 keratin 82 [Homo sapiens] 29 8.5
gi|49533617 sterol O-acyltransferase 1 [Homo sapiens] 29 8.5
>gi|47078240 G protein pathway suppressor 1 isoform 2 [Homo sapiens]
Length = 491
Score = 969 bits (2505), Expect = 0.0
Identities = 491/491 (100%), Positives = 491/491 (100%)
Query: 1 MPLPVQVFNLQGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERL 60
MPLPVQVFNLQGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERL
Sbjct: 1 MPLPVQVFNLQGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERL 60
Query: 61 QFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESG 120
QFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESG
Sbjct: 61 QFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESG 120
Query: 121 VEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSN 180
VEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSN
Sbjct: 121 VEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSN 180
Query: 181 ALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDS 240
ALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDS
Sbjct: 181 ALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDS 240
Query: 241 QTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALAT 300
QTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALAT
Sbjct: 241 QTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALAT 300
Query: 301 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 360
FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP
Sbjct: 301 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 360
Query: 361 HVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSH 420
HVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSH
Sbjct: 361 HVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSH 420
Query: 421 SKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTP 480
SKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTP
Sbjct: 421 SKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTP 480
Query: 481 ANSQSRMSTNM 491
ANSQSRMSTNM
Sbjct: 481 ANSQSRMSTNM 491
>gi|47078238 G protein pathway suppressor 1 isoform 1 [Homo sapiens]
Length = 527
Score = 936 bits (2418), Expect = 0.0
Identities = 476/481 (98%), Positives = 477/481 (99%), Gaps = 4/481 (0%)
Query: 11 QGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTL 70
+GAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTL
Sbjct: 51 EGAVEPMQIDVDPQEDPQNAPDVNYVVENPSLDLEQYAASYSGLMRIERLQFIADHCPTL 110
Query: 71 RVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAW 130
RVEALKMALSFVQRTFNVDMYEEIHRKLSEATR ELQNAPDAIPESGVEPPALDTAW
Sbjct: 111 RVEALKMALSFVQRTFNVDMYEEIHRKLSEATR----ELQNAPDAIPESGVEPPALDTAW 166
Query: 131 VEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARD 190
VEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARD
Sbjct: 167 VEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARD 226
Query: 191 YCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLK 250
YCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLK
Sbjct: 227 YCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLK 286
Query: 251 CAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNV 310
CAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNV
Sbjct: 287 CAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNV 346
Query: 311 ISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIR 370
ISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIR
Sbjct: 347 ISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIR 406
Query: 371 NRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVD 430
NRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVD
Sbjct: 407 NRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVD 466
Query: 431 QRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTN 490
QRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTN
Sbjct: 467 QRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTN 526
Query: 491 M 491
M
Sbjct: 527 M 527
>gi|7661914 proteasome (prosome, macropain) 26S subunit, non-ATPase,
6 [Homo sapiens]
Length = 389
Score = 98.2 bits (243), Expect = 1e-20
Identities = 85/388 (21%), Positives = 172/388 (44%), Gaps = 21/388 (5%)
Query: 68 PTLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRSSLRELQNAP--DAIPESGVEPPA 125
P LR+ L+ LS + + + +E+ +++R+ AP +A+ +S
Sbjct: 15 PDLRIAQLRFLLSLPEHRGDAAVRDEL--------MAAVRDNNMAPYYEALCKS--LDWQ 64
Query: 126 LDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 185
+D + +K +L++LD +L++ + N + IR ++ GD AL +
Sbjct: 65 IDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAF 124
Query: 186 SRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAI 245
+ D + H +++ ++++ ++ + + KA+S + E+ G+ D +
Sbjct: 125 RKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKS---LIEEGGDWDRRN--- 178
Query: 246 LTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQE 305
+LK GL +A R +KQAA+ L L + EL+ Y ++ +R +
Sbjct: 179 --RLKVYQGLYCVAIRDFKQAAE-LFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPD 235
Query: 306 LQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTL 365
L+ VI + L P VR +F YE +Y+ + L ++ + D APH R
Sbjct: 236 LREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYY 295
Query: 366 YTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILY 425
++R A Q Y S + MA AF V ++ EL++ I G + ++D ++I+
Sbjct: 296 VREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVE 355
Query: 426 ARDVDQRSTTFEKSLLMGKEFQRRAKAM 453
D ++ +++++ G R + +
Sbjct: 356 TNRPDSKNWQYQETIKKGDLLLNRVQKL 383
>gi|219842262 COP9 constitutive photomorphogenic homolog subunit 2
isoform 2 [Homo sapiens]
Length = 450
Score = 45.8 bits (107), Expect = 9e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 343 KMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALED 402
K+L N++ D ++ H+ L IR + LI+ PY + ++ N VA +E
Sbjct: 335 KILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVES 394
Query: 403 ELTQLILEGLISARVDSHSKIL 424
L Q IL+ I R+D +++L
Sbjct: 395 LLVQCILDNTIHGRIDQVNQLL 416
>gi|4759264 COP9 constitutive photomorphogenic homolog subunit 2
isoform 1 [Homo sapiens]
Length = 443
Score = 45.8 bits (107), Expect = 9e-05
Identities = 24/82 (29%), Positives = 41/82 (50%)
Query: 343 KMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALED 402
K+L N++ D ++ H+ L IR + LI+ PY + ++ N VA +E
Sbjct: 328 KILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELNIDVADVES 387
Query: 403 ELTQLILEGLISARVDSHSKIL 424
L Q IL+ I R+D +++L
Sbjct: 388 LLVQCILDNTIHGRIDQVNQLL 409
>gi|28872725 proteasome 26S non-ATPase subunit 11 [Homo sapiens]
Length = 422
Score = 39.3 bits (90), Expect = 0.008
Identities = 42/236 (17%), Positives = 87/236 (36%)
Query: 205 VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYK 264
+++V + H LS + KA + A + L +G+ A K
Sbjct: 166 LVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDW 225
Query: 265 QAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALATFDRQELQRNVISSSSFKLFLELEP 324
+ A +F+ D + Y LC + +++Q V + +
Sbjct: 226 KTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTE 285
Query: 325 QVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSA 384
++ + A K L + + L D ++ H+ LY + + LI+ P+
Sbjct: 286 ALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRV 345
Query: 385 DMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKILYARDVDQRSTTFEKSL 440
+ +++ + A +E +L+Q+IL+ +D +L D T+E +L
Sbjct: 346 QIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAAL 401
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 33.5 bits (75), Expect = 0.45
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 17/103 (16%)
Query: 98 LSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSI 157
L+ + S +EL P+A+PES EPP E +K+ +++DT+ K ++
Sbjct: 1481 LTASCNSEPKELAGDPEAVPESDEEPPP-----GEQAQKQDQKNSKEVDTEFKEGNPATM 1535
Query: 158 K---------ESIRRGHDDLGDHYLDCGDLSNA---LKCYSRA 188
+ +S+ + + D + DC + A L+ Y+RA
Sbjct: 1536 EIDSETVQAVQSLTQESSEQDDTFQDCAETQEACRSLQNYTRA 1578
>gi|149944680 HAUS augmin-like complex, subunit 5 [Homo sapiens]
Length = 633
Score = 33.1 bits (74), Expect = 0.59
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 357 YLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISAR 416
Y+ HV + T + R + ++ S + R V L E+ +L
Sbjct: 45 YILQHVHSQRTVKKIRGNLLWYGHQDSPQVRRKLE-LEAAVTRLRAEIQEL--------- 94
Query: 417 VDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQG 476
S L RD + + T E++ ++ QRRA + +A +R Q H P + Q
Sbjct: 95 --DQSLELMERDTEAQDTAMEQARQHTQDTQRRALLLRAQAGAMRRQQHTLRDPMQRLQN 152
Query: 477 ELTPANSQSR 486
+L R
Sbjct: 153 QLRRLQDMER 162
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 33.1 bits (74), Expect = 0.59
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Query: 136 KKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSA 195
+K+LL LEK + + ++ S+K ++R ++D LS L + + DY TS
Sbjct: 116 RKSLLALEKEEEEERSKTIESLKTALRTKPMRFVTRFIDLDGLSCILN-FLKTMDYETSE 174
Query: 196 KHVINMCLNVIKVSV-YLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAG 254
+ + IK + Q +HVL++ +ES IA+ + +T+ + ++ A
Sbjct: 175 SRIHTSLIGCIKALMNNSQGRAHVLAH---SESINVIAQSLSTENIKTKVAVLEILGAVC 231
Query: 255 LAELAARKYKQA 266
L +K QA
Sbjct: 232 LVPGGHKKVLQA 243
>gi|63252906 tropomyosin 1 alpha chain isoform 7 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 1.0
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
ALD A EA +K A + ++L+ D+ + KE + R +D D L+ +L A
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEEDI------AAKEKLLRVSEDERDRVLE--ELHKAED 69
Query: 184 CYSRARDYCTSAKHVI---NMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEI 231
A + A+ + N + ++ +++ LQ ++E ++
Sbjct: 70 SLLAAEEAAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKV 129
Query: 232 AEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 276
E R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 130 IESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252902 tropomyosin 1 alpha chain isoform 2 [Homo sapiens]
Length = 284
Score = 32.3 bits (72), Expect = 1.0
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
ALD A EA +K A + ++L+ D+ + KE + R +D D L+ +L A
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEEDI------AAKEKLLRVSEDERDRVLE--ELHKAED 69
Query: 184 CYSRARDYCTSAKHVI---NMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEI 231
A + A+ + N + ++ +++ LQ ++E ++
Sbjct: 70 SLLAAEEAAAKAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKV 129
Query: 232 AEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 276
E R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 130 IESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|223555975 tropomyosin 4 isoform 1 [Homo sapiens]
Length = 284
Score = 32.0 bits (71), Expect = 1.3
Identities = 33/159 (20%), Positives = 70/159 (44%), Gaps = 16/159 (10%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
A+D A EA +K A K ++++ +L + +++ ++ D+L + D D L+
Sbjct: 18 AIDRAEQAEADKKAAEDKCKQVEEELTH-----LQKKLKGTEDELDKYSEDLKDAQEKLE 72
Query: 184 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 234
+ +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LTEKKASDAEGDVAALNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIEN 132
Query: 235 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLL 272
R +D + I +LK A +AE A RKY++ A+ L++
Sbjct: 133 RAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVI 171
>gi|94681046 cyclin M4 [Homo sapiens]
Length = 775
Score = 32.0 bits (71), Expect = 1.3
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 353 LLDMYLAPHVRTLYTQIRNRALIQYFSPY---VSADMHRMAAAFNTTVAALEDELTQL 407
LLD +L +RT+Y + + +++ PY V +++ + A +ED +TQL
Sbjct: 323 LLDFFLGQEIRTVYNREKLMEMLKVTEPYNDLVKEELNMIQGALELRTKTVEDIMTQL 380
>gi|145309298 coiled-coil domain containing 16 [Homo sapiens]
Length = 372
Score = 32.0 bits (71), Expect = 1.3
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Query: 93 EIHRKLSEATRSSLRELQNAPDAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNY 152
EIH K+ E +N +A+PE + P +D + K + E +
Sbjct: 230 EIHEKVVERR-------ENTAEALPEGFFDDPEVDARVRKVDAPKDQMDKEWDEFQKAMR 282
Query: 153 KGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKV 208
+ N+I E+I D+ G G++ ++CY R + N ++ +
Sbjct: 283 QVNTISEAIVAEEDEEGRLDRQIGEIDEQIECYRRVEKLRNRQDEIKNKLKEILTI 338
>gi|63252900 tropomyosin 1 alpha chain isoform 4 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.7
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 184 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 234
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 235 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 276
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252898 tropomyosin 1 alpha chain isoform 1 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.7
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 184 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 234
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 235 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 276
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252896 tropomyosin 1 alpha chain isoform 3 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.7
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 184 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 234
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 235 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 276
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|27597085 tropomyosin 1 alpha chain isoform 5 [Homo sapiens]
Length = 284
Score = 31.6 bits (70), Expect = 1.7
Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 125 ALDTA-WVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALK 183
ALD A EA +K A + ++L+ +L S+++ ++ D+L + D L+
Sbjct: 18 ALDRAEQAEADKKAAEDRSKQLEDELV-----SLQKKLKGTEDELDKYSEALKDAQEKLE 72
Query: 184 CYSRARDYCTSAKHVINMCLNVI---------KVSVYLQNWSHVLSYVSKAESTPEIAEQ 234
+ + +N + ++ +++ LQ ++E ++ E
Sbjct: 73 LAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIES 132
Query: 235 RGERDSQTQAILT-KLKCAAGLAELAARKYKQAAKCLLLASFD 276
R ++D + I +LK A +AE A RKY++ A+ L++ D
Sbjct: 133 RAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESD 175
>gi|63252904 tropomyosin 1 alpha chain isoform 6 [Homo sapiens]
Length = 245
Score = 30.4 bits (67), Expect = 3.8
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 207 KVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILT-KLKCAAGLAELAARKYKQ 265
+++ LQ ++E ++ E R ++D + I +LK A +AE A RKY++
Sbjct: 69 RLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEE 128
Query: 266 AAKCLLLASFD 276
A+ L++ D
Sbjct: 129 VARKLVIIESD 139
>gi|46397390 pogo transposable element with ZNF domain isoform 1 [Homo
sapiens]
Length = 1410
Score = 30.0 bits (66), Expect = 5.0
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 85 TFNVDMYEEIHRKLSEATRSSLRELQNA---PDAIPESGVEPPALDTAWVEATRKKALLK 141
T N DM EE+ L E + S +++ P + PE +EP +L + + ++
Sbjct: 1340 TRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPESLHQLFEGESETESFYG 1399
Query: 142 LEKLDTDL 149
E+ D DL
Sbjct: 1400 FEEADLDL 1407
>gi|46397394 pogo transposable element with ZNF domain isoform 2 [Homo
sapiens]
Length = 1357
Score = 30.0 bits (66), Expect = 5.0
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 85 TFNVDMYEEIHRKLSEATRSSLRELQNA---PDAIPESGVEPPALDTAWVEATRKKALLK 141
T N DM EE+ L E + S +++ P + PE +EP +L + + ++
Sbjct: 1287 TRNADMQEELIASLEEQLKLSGEHSESSTPRPRSSPEETIEPESLHQLFEGESETESFYG 1346
Query: 142 LEKLDTDL 149
E+ D DL
Sbjct: 1347 FEEADLDL 1354
>gi|221316695 multimerin 2 precursor [Homo sapiens]
Length = 949
Score = 30.0 bits (66), Expect = 5.0
Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 13/182 (7%)
Query: 3 LPVQVFNLQGAVEPMQIDVDPQ----EDPQNAPDVN--YVVENPSLDLEQYAASYSGLMR 56
L Q F L ++ +Q DVD + Q AP N V+ P S +
Sbjct: 315 LHAQHFTLHRSISELQADVDTKLKRLHKAQEAPGTNGSLVLATPGAGARPEPDSLQARLG 374
Query: 57 IERLQFIADHCPTLR-VEALKMALSFVQRTF--NVDMYEEIHRKLSEATRSSLRELQNAP 113
+ H T R E L+ L ++ T +VD +E++ + E + ++
Sbjct: 375 QLQRNLSELHMTTARREEELQYTLEDMRATLTRHVDEIKELYSESDE----TFDQISKVE 430
Query: 114 DAIPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYL 173
+ E V AL V K +++ K + + + + N + ++ GH DL +
Sbjct: 431 RQVEELQVNHTALRELRVILMEKSLIMEENKEEVERQLLELNLTLQHLQGGHADLIKYVK 490
Query: 174 DC 175
DC
Sbjct: 491 DC 492
>gi|30089940 Golgi autoantigen, golgin subfamily a, 3 [Homo sapiens]
Length = 1498
Score = 30.0 bits (66), Expect = 5.0
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)
Query: 43 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHRKLSE-- 100
DL++ + G ERLQ +AD +L + ++ L+ +QR ++ ++ H L +
Sbjct: 669 DLQRRLEEFEG--ERERLQRMADSAASLEQQLEQVKLTLLQRDQQLEALQQEHLDLMKQL 726
Query: 101 -ATRSSLRELQNAPDAIPESGVEPPA-LDTAWVEATRKK---ALLKLEKLDTDLKNYKGN 155
T+ +L+ + + DA+ E A L EA ++ LL+ EK+ +
Sbjct: 727 TLTQEALQSREQSLDALQTHYDELQARLGELQGEAASREDTICLLQNEKIILEAALQAAK 786
Query: 156 SIKESIRRG 164
S KE + RG
Sbjct: 787 SGKEELDRG 795
>gi|37221184 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 6.5
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 131 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 179
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 180 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 237
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 238 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 296
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 297 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 356
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 357 YLAPHVRTL 365
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|37221182 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 6.5
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 131 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 179
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 180 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 237
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 238 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 296
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 297 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 356
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 357 YLAPHVRTL 365
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|37221187 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 6.5
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 131 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 179
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 180 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 237
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 238 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 296
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 297 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 356
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 357 YLAPHVRTL 365
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|31581522 krev interaction trapped 1 isoform 1 [Homo sapiens]
Length = 736
Score = 29.6 bits (65), Expect = 6.5
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 131 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 179
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 334 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 391
Query: 180 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 237
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 392 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 451
Query: 238 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 296
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 452 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 493
Query: 297 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 356
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 494 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 543
Query: 357 YLAPHVRTL 365
Y AP + +
Sbjct: 544 YTAPDAKLI 552
>gi|61742817 krev interaction trapped 1 isoform 2 [Homo sapiens]
Length = 688
Score = 29.6 bits (65), Expect = 6.5
Identities = 57/249 (22%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 131 VEATRKKALLKLEKLDTDLKNYK-----------GNSIKESIRRGHDDLGDHYLDCGDLS 179
VEATR LL+ K + +L N + G++ I H + H D S
Sbjct: 286 VEATR--ILLEKGKCNPNLLNGQLSSPLHFAAGGGHAEIVQILLNHPETDRHITDQQGRS 343
Query: 180 NALKCYSRARDYCTSAKHVINMCLN--VIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGE 237
C ++ A ++ +N KV +Y + S+ + +T G
Sbjct: 344 PLNICEENKQNNWEEAAKLLKEAINKPYEKVRIYRMDGSYRSVELKHGNNTTVQQIMEGM 403
Query: 238 RDSQ-TQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLC 296
R SQ TQ T C+ L+ L + Y + + + D+PE+L+
Sbjct: 404 RLSQETQQYFTIWICSENLS-LQLKPYHKPLQHVR-------DWPEILAE---------- 445
Query: 297 ALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDM 356
L D Q + +L LE+E Q+ D + + L + DE + NLL
Sbjct: 446 -LTNLDPQRETPQLFLRRDVRLPLEVEKQIEDPL---------AILILFDEARYNLLKGF 495
Query: 357 YLAPHVRTL 365
Y AP + +
Sbjct: 496 YTAPDAKLI 504
>gi|27477127 keratin 82 [Homo sapiens]
Length = 513
Score = 29.3 bits (64), Expect = 8.5
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 7/85 (8%)
Query: 188 ARDYCTSAKHVINMCLNVIKVSVYLQNWS-HVLSYVSKAESTPEIAEQRGERDSQTQAIL 246
A ++C + ++ N L + K+ LQ + +V + K E AEQ+GE A L
Sbjct: 322 AGNHCDNLRNRKNEILEMNKLIQRLQQETENVKAQRCKLEGAIAEAEQQGE------AAL 375
Query: 247 TKLKCAAGLAELAARKYKQAAKCLL 271
KC E A +K KQ CLL
Sbjct: 376 NDAKCKLAGLEEALQKAKQDMACLL 400
>gi|49533617 sterol O-acyltransferase 1 [Homo sapiens]
Length = 550
Score = 29.3 bits (64), Expect = 8.5
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Query: 222 VSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASF------ 275
+SK+ PE E +R+ +++ T + +L A+K K A+ L F
Sbjct: 13 LSKSRENPE--EDEDQRNPAKESLETPSNGRIDIKQLIAKKIKLTAEAEELKPFFMKEVG 70
Query: 276 -DHCDFPELLSPSNVAIYGGLCALATFDRQELQRN 309
DF L + ++ G CAL TF E ++N
Sbjct: 71 SHFDDFVTNLIEKSASLDNGGCALTTFSVLEGEKN 105
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,867,491
Number of Sequences: 37866
Number of extensions: 675309
Number of successful extensions: 2081
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2068
Number of HSP's gapped (non-prelim): 39
length of query: 491
length of database: 18,247,518
effective HSP length: 106
effective length of query: 385
effective length of database: 14,233,722
effective search space: 5479982970
effective search space used: 5479982970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.