Guide to the Human Genome
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Search of human proteins with 46409276

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46409276 transmembrane protein 207 [Homo sapiens]
         (146 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46409276 transmembrane protein 207 [Homo sapiens]                  305   9e-84
gi|30425506 transmembrane protein 52 [Homo sapiens]                    37   0.008
gi|23308507 hypothetical protein LOC120939 [Homo sapiens]              33   0.086
gi|4505463 contactin associated protein 1 precursor [Homo sapiens]     30   0.73 
gi|4507117 Stannin [Homo sapiens]                                      29   1.2  
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         28   2.1  
gi|5803023 lectin, mannose-binding 2 precursor [Homo sapiens]          28   2.1  
gi|112421108 capicua homolog [Homo sapiens]                            28   2.1  
gi|33356148 formin-like 1 [Homo sapiens]                               28   2.8  
gi|110735443 delta-like 1 [Homo sapiens]                               27   4.7  
gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo ...    27   4.7  
gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]            27   4.7  
gi|39930575 shisa homolog 4 [Homo sapiens]                             27   4.7  
gi|27436867 slit and trk like 4 protein [Homo sapiens]                 27   4.7  
gi|15208643 ADP-ribosylation factor domain protein 1 isoform gam...    27   6.2  
gi|15208641 ADP-ribosylation factor domain protein 1 isoform bet...    27   6.2  
gi|4502197 ADP-ribosylation factor domain protein 1 isoform alph...    27   6.2  
gi|9507143 G protein-coupled receptor 173 [Homo sapiens]               27   6.2  
gi|106507239 EGFR-coamplified and overexpressed protein [Homo sa...    27   8.0  
gi|189027139 chromosome 9 open reading frame 61 [Homo sapiens]         27   8.0  
gi|189027135 chromosome 9 open reading frame 61 [Homo sapiens]         27   8.0  
gi|169162161 PREDICTED: similar to EGFR-coamplified and overexpr...    27   8.0  
gi|89040494 PREDICTED: hypothetical protein [Homo sapiens]             27   8.0  
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap...    27   8.0  
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]            27   8.0  
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap...    27   8.0  
gi|113411383 PREDICTED: similar to EGFR-coamplified and overexpr...    27   8.0  
gi|20357552 cortactin isoform a [Homo sapiens]                         27   8.0  
gi|20357556 cortactin isoform b [Homo sapiens]                         27   8.0  
gi|194294554 SET binding protein 1 isoform a [Homo sapiens]            27   8.0  

>gi|46409276 transmembrane protein 207 [Homo sapiens]
          Length = 146

 Score =  305 bits (781), Expect = 9e-84
 Identities = 146/146 (100%), Positives = 146/146 (100%)

Query: 1   MSRSRLFSVTSAISTIGILCLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVL 60
           MSRSRLFSVTSAISTIGILCLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVL
Sbjct: 1   MSRSRLFSVTSAISTIGILCLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVL 60

Query: 61  VAALLCGAVVLCLQCWLRRPRIDSHRRTMAVFAVGDLDSIYGTEAAVSPTVGIHLQTQTP 120
           VAALLCGAVVLCLQCWLRRPRIDSHRRTMAVFAVGDLDSIYGTEAAVSPTVGIHLQTQTP
Sbjct: 61  VAALLCGAVVLCLQCWLRRPRIDSHRRTMAVFAVGDLDSIYGTEAAVSPTVGIHLQTQTP 120

Query: 121 DLYPVPAPCFGPLGSPPPYEEIVKTT 146
           DLYPVPAPCFGPLGSPPPYEEIVKTT
Sbjct: 121 DLYPVPAPCFGPLGSPPPYEEIVKTT 146


>gi|30425506 transmembrane protein 52 [Homo sapiens]
          Length = 209

 Score = 36.6 bits (83), Expect = 0.008
 Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 29/148 (19%)

Query: 18  ILCLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQ-CW 76
           +L LP   L  +D  C+  + C     +  + W++ ++LL VL+  LLCG    C++ C 
Sbjct: 23  LLPLPQVALGFADGSCDPSDQCPP-QARWSSLWHVGLILLAVLL-LLLCGVTAGCVRFCC 80

Query: 77  LRR-----PRIDSHRRTMAVFAVGDLDSIYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFG 131
           LR+     P +   R+   V AV  +DS    ++ V  TV  +   Q P    +P P FG
Sbjct: 81  LRKQAQAQPHLPPARQPCDV-AVIPMDS----DSPVHSTVTSYSSVQYPLGMRLPLP-FG 134

Query: 132 PLG---------------SPPPYEEIVK 144
            L                 PP Y+E VK
Sbjct: 135 ELDLDSMAPPAYSLYTPEPPPSYDEAVK 162


>gi|23308507 hypothetical protein LOC120939 [Homo sapiens]
          Length = 163

 Score = 33.1 bits (74), Expect = 0.086
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)

Query: 32 PCEEDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQC 75
          PC     C+  +  H   WYIW LL+++    LLCG   LC +C
Sbjct: 7  PCCISSCCLTTDWVHL--WYIW-LLVVIGALLLLCGLTSLCFRC 47


>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
          Length = 1384

 Score = 30.0 bits (66), Expect = 0.73
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 27   VLSDLPCEEDEMCV--NYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQCWLRRPRIDS 84
            ++S++P E D   +  ++   H  GW    +LL  LVA LL G V + +  +L+  R   
Sbjct: 1256 LVSEVPPELDPWYLPPDFPYYHDEGWVA--ILLGFLVAFLLLGLVGMLVLFYLQNHRYKG 1313

Query: 85   HRRTMAVFAVGDLDSIYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPLGSPPP 138
               T    A  +     G++  + PT G   Q  TP   P  AP   P  +P P
Sbjct: 1314 SYHTNEPKAAHEYHP--GSKPPL-PTSG-PAQVPTPTAAPNQAPASAPAPAPTP 1363


>gi|4507117 Stannin [Homo sapiens]
          Length = 88

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 44 DQHPNGWYIWILLLLVLVAALLCGAVVLCLQCWLRRPRIDSHRRTMAVFAVGD 96
          D  P    + ++++L+ +AAL  GA++L   C+LR  RI       ++   G+
Sbjct: 5  DHSPTTGVVTVIVILIAIAAL--GALILGCWCYLRLQRISQSEDEESIVGDGE 55


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 102 GTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPLGSPP 137
           G + A     G  L  +T  L P P PC  PL  PP
Sbjct: 304 GAKEAARQDEGARLLRRTETLLPGPRPCPSPLPPPP 339


>gi|5803023 lectin, mannose-binding 2 precursor [Homo sapiens]
          Length = 356

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 21/73 (28%)

Query: 18  ILCLPLFQLVLSDLPCEE---------------------DEMCVNYNDQHPNGWYIWILL 56
           I+ + LFQL++   P EE                     D+   N+      GW +++LL
Sbjct: 268 IISMKLFQLMVEHTPDEESIDWTKIEPSVNFLKSPKDNVDDPTGNFRSGPLTGWRVFLLL 327

Query: 57  LLVLVAALLCGAV 69
           L  L+  ++C  V
Sbjct: 328 LCALLGIVVCAVV 340


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 105 AAVSPTVGIHLQTQTPDLYPVPAPCFGPLGSPPP 138
           AA +PT GI +    P   P  A    P+ +PPP
Sbjct: 878 AATAPTPGIPILQSVPSAPPPKAQSVSPVQAPPP 911


>gi|33356148 formin-like 1 [Homo sapiens]
          Length = 1100

 Score = 28.1 bits (61), Expect = 2.8
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 108 SPTVGIHLQTQTPDLYPVPAPCFGPLGSPPP 138
           +PT G+   + +PDL P   P  G    PPP
Sbjct: 516 APTPGVPTGSPSPDLAPAAEPAPGAAPPPPP 546


>gi|110735443 delta-like 1 [Homo sapiens]
          Length = 723

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 4/64 (6%)

Query: 22  PLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILL----LLVLVAALLCGAVVLCLQCWL 77
           P  Q +L +LP     + +    +   G + W+ +    +LVL+  L C AVV+C++  L
Sbjct: 514 PNCQFLLPELPPGPAVVDLTEKLEGQGGPFPWVAVCAGVILVLMLLLGCAAVVVCVRLRL 573

Query: 78  RRPR 81
           ++ R
Sbjct: 574 QKHR 577


>gi|239751284 PREDICTED: hypothetical protein XP_002347797 [Homo
           sapiens]
          Length = 1674

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 13/39 (33%), Positives = 17/39 (43%)

Query: 99  SIYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPLGSPP 137
           + YG +  +SP V        P L P PAP   P+   P
Sbjct: 252 TFYGLKPDLSPEVXXXXXXLLPALAPTPAPALAPVPVSP 290


>gi|193211395 calcium homeostasis modulator 3 [Homo sapiens]
          Length = 344

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 8/56 (14%)

Query: 25  QLVLSDLPCEEDEMCVNYNDQHPNGWYI--------WILLLLVLVAALLCGAVVLC 72
           QL L+ +PC+EDE+  +   +     Y+        W + LL+++AA L   +  C
Sbjct: 149 QLFLAKVPCKEDELVRDSPARKAVSRYLRCLSQAIGWSVTLLLIIAAFLARCLRPC 204


>gi|39930575 shisa homolog 4 [Homo sapiens]
          Length = 197

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 11/115 (9%)

Query: 35  EDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQCWLRRPRIDSHRRTMAVFAV 94
           + + C+ ++ +   G    ++L + +VA  +C  +  C   + RR ++ S      +   
Sbjct: 74  QQKHCLAFSPKTIAGIASAVILFVAVVATTICCFLCSCCYLYRRRQQLQSPFEGQEIPMT 133

Query: 95  G-DLDSIYG-----TEAAVSPTVGIHLQTQTP----DLYPVPAPCFGPLGSPPPY 139
           G  +  +Y            P  G       P     LYP   P + P  +PPPY
Sbjct: 134 GIPVQPVYPYPQDPKAGPAPPQPGFMYPPSGPAPQYPLYPAGPPVYNP-AAPPPY 187


>gi|27436867 slit and trk like 4 protein [Homo sapiens]
          Length = 837

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 10/18 (55%), Positives = 12/18 (66%)

Query: 113 IHLQTQTPDLYPVPAPCF 130
           +  QT+ P L P PAPCF
Sbjct: 330 VSYQTRVPPLTPCPAPCF 347


>gi|15208643 ADP-ribosylation factor domain protein 1 isoform gamma
           [Homo sapiens]
          Length = 546

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 20  CLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQC 75
           C+  +   L +  C ++EM ++  D H     IW+      +  LL      CL C
Sbjct: 287 CIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHC 342


>gi|15208641 ADP-ribosylation factor domain protein 1 isoform beta
           [Homo sapiens]
          Length = 569

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 20  CLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQC 75
           C+  +   L +  C ++EM ++  D H     IW+      +  LL      CL C
Sbjct: 287 CIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHC 342


>gi|4502197 ADP-ribosylation factor domain protein 1 isoform alpha
           [Homo sapiens]
          Length = 574

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 20  CLPLFQLVLSDLPCEEDEMCVNYNDQHPNGWYIWILLLLVLVAALLCGAVVLCLQC 75
           C+  +   L +  C ++EM ++  D H     IW+      +  LL      CL C
Sbjct: 287 CIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQEDMTILLSEVSAACLHC 342


>gi|9507143 G protein-coupled receptor 173 [Homo sapiens]
          Length = 373

 Score = 26.9 bits (58), Expect = 6.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 104 EAAVSPTVGIHLQTQTPDLYPVPAPCFGPLGSPPPYE 140
           +AAV+P V   L           APC+G  G+P P E
Sbjct: 332 QAAVNPIVCFLLNKDLKKCLRTHAPCWGTGGAPAPRE 368


>gi|106507239 EGFR-coamplified and overexpressed protein [Homo
           sapiens]
          Length = 172

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 3/21 (14%)

Query: 124 PVPAPCFGPLGSPPPYEEIVK 144
           P PA C  P   PPPYE++VK
Sbjct: 153 PPPAYCNTP---PPPYEQVVK 170


>gi|189027139 chromosome 9 open reading frame 61 [Homo sapiens]
          Length = 450

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 9/33 (27%)

Query: 120 PDLYPVP---------APCFGPLGSPPPYEEIV 143
           PD+ P+P            F PL  PPPYE +V
Sbjct: 169 PDVIPLPHIYGARIKGVEVFCPLDPPPPYEAVV 201


>gi|189027135 chromosome 9 open reading frame 61 [Homo sapiens]
          Length = 450

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 9/33 (27%)

Query: 120 PDLYPVP---------APCFGPLGSPPPYEEIV 143
           PD+ P+P            F PL  PPPYE +V
Sbjct: 169 PDVIPLPHIYGARIKGVEVFCPLDPPPPYEAVV 201


>gi|169162161 PREDICTED: similar to EGFR-coamplified and
           overexpressed protein [Homo sapiens]
          Length = 172

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 3/21 (14%)

Query: 124 PVPAPCFGPLGSPPPYEEIVK 144
           P PA C  P   PPPYE++VK
Sbjct: 153 PPPAYCNTP---PPPYEQVVK 170


>gi|89040494 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 187

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 4/44 (9%)

Query: 99  SIYGTEAAVSPTVGIHLQTQTPDLYPVPAPC----FGPLGSPPP 138
           ++YG  A V P   +       D +  P PC    FG   +PPP
Sbjct: 41  ALYGPRARVLPARDLSSARARRDAFAEPRPCHVGLFGSREAPPP 84


>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 100 IYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPL----GSPP 137
           + G     +P   + + T  P   P P P  GPL    G+PP
Sbjct: 131 VLGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAPP 172


>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 878

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 100 IYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPL----GSPP 137
           + G     +P   + + T  P   P P P  GPL    G+PP
Sbjct: 131 VLGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAPP 172


>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 4/42 (9%)

Query: 100 IYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPL----GSPP 137
           + G     +P   + + T  P   P P P  GPL    G+PP
Sbjct: 131 VLGPGVTANPGTSLSVFTALPFTTPAPGPAHGPLLVTAGAPP 172


>gi|113411383 PREDICTED: similar to EGFR-coamplified and
           overexpressed protein [Homo sapiens]
          Length = 172

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/21 (57%), Positives = 14/21 (66%), Gaps = 3/21 (14%)

Query: 124 PVPAPCFGPLGSPPPYEEIVK 144
           P PA C  P   PPPYE++VK
Sbjct: 153 PPPAYCNTP---PPPYEQVVK 170


>gi|20357552 cortactin isoform a [Homo sapiens]
          Length = 550

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 116 QTQTPDLYPVPAPCFGPLGSPPPYEE 141
           +TQTP + P P P    L S P YE+
Sbjct: 398 KTQTPPVSPAPQPTEERLPSSPVYED 423


>gi|20357556 cortactin isoform b [Homo sapiens]
          Length = 513

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/26 (46%), Positives = 15/26 (57%)

Query: 116 QTQTPDLYPVPAPCFGPLGSPPPYEE 141
           +TQTP + P P P    L S P YE+
Sbjct: 361 KTQTPPVSPAPQPTEERLPSSPVYED 386


>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
          Length = 1596

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 8/41 (19%)

Query: 98   DSIYGTEAAVSPTVGIHLQTQTPDLYPVPAPCFGPLGSPPP 138
            D+I  T  AV     IH+  + P L P P P   PL  PPP
Sbjct: 1503 DTIMATIEAV-----IHMAREAPPLPPPPPP---PLPPPPP 1535


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.325    0.141    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,362,849
Number of Sequences: 37866
Number of extensions: 287758
Number of successful extensions: 1508
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 39
length of query: 146
length of database: 18,247,518
effective HSP length: 92
effective length of query: 54
effective length of database: 14,763,846
effective search space: 797247684
effective search space used: 797247684
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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