Guide to the Human Genome
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Name: TMEM207 Sequence: fasta or formatted (146aa) NCBI GI: 46409276
Description:

transmembrane protein 207

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2          9           2
 C cysteine            4.8          7           1
 D aspartate           4.8          7           1
 E glutamate           4.1          6           2
 F phenylalanine       2.7          4           1
 G glycine             5.5          8           1
 H histidine           2.1          3           1
 I isoleucine          6.2          9           1
 K lysine              0.7          1           1
 L leucine            14.4         21           4
 M methionine          2.1          3           1
 N asparagine          2.1          3           1
 P proline             8.9         13           3
 Q glutamine           3.4          5           1
 R arginine            4.8          7           2
 S serine              6.8         10           1
 T threonine           6.2          9           2
 V valine              8.9         13           2
 W tryptophan          2.1          3           1
 Y tyrosine            3.4          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 207 
TMEM52                0.043   transmembrane protein 52 
C12orf59              0.029   hypothetical protein LOC120939 
CNTNAP1               0.018   contactin associated protein 1 precursor 
SNN                   0.014   Stannin 
TNRC18                0.011   trinucleotide repeat containing 18 
LMAN2                 0.011   lectin, mannose-binding 2 precursor 
CIC                   0.011   capicua homolog 
FMNL1                 0.011   formin-like 1 
DLL1                  0.007   delta-like 1 
LOC100290717          0.007   PREDICTED: hypothetical protein XP_002347797 
CALHM3                0.007   calcium homeostasis modulator 3 
SHISA4                0.007   shisa homolog 4 
SLITRK4               0.007   slit and trk like 4 protein 
TRIM23                0.007   ADP-ribosylation factor domain protein 1 isoform gam...
TRIM23                0.007   ADP-ribosylation factor domain protein 1 isoform bet...
TRIM23                0.007   ADP-ribosylation factor domain protein 1 isoform alph...
GPR173                0.007   G protein-coupled receptor 173 
ECOP                  0.007   EGFR-coamplified and overexpressed protein 
FAM189A2              0.007   chromosome 9 open reading frame 61 
FAM189A2              0.007   chromosome 9 open reading frame 61 
LOC729086             0.007   PREDICTED: similar to EGFR-coamplified and overexpr...
LOC645307             0.007   PREDICTED: hypothetical protein 
FAM22E                0.007   PREDICTED: hypothetical protein isoform 1 
FAM22E                0.007   PREDICTED: hypothetical protein 
FAM22B                0.007   PREDICTED: hypothetical protein isoform 1 
LOC729086             0.007   PREDICTED: similar to EGFR-coamplified and overexpr...
CTTN                  0.007   cortactin isoform a 
CTTN                  0.007   cortactin isoform b 
SETBP1                0.007   SET binding protein 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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