Guide to the Human Genome
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Name: GPR173 Sequence: fasta or formatted (373aa) NCBI GI: 9507143
Description:

G protein-coupled receptor 173

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.1         49           3
 C cysteine            4.0         15           1
 D aspartate           1.9          7           1
 E glutamate           2.9         11           2
 F phenylalanine       6.4         24           1
 G glycine             6.2         23           2
 H histidine           3.2         12           2
 I isoleucine          4.0         15           1
 K lysine              4.3         16           2
 L leucine            11.5         43           3
 M methionine          4.8         18           1
 N asparagine          2.1          8           1
 P proline             5.4         20           2
 Q glutamine           1.9          7           1
 R arginine            5.1         19           2
 S serine              4.8         18           2
 T threonine           4.6         17           2
 V valine              7.5         28           1
 W tryptophan          2.4          9           1
 Y tyrosine            3.8         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 173 
GPR85                 0.631   G protein-coupled receptor 85 
GPR85                 0.631   G protein-coupled receptor 85 
GPR85                 0.631   G protein-coupled receptor 85 
GPR85                 0.631   G protein-coupled receptor 85 
GPR27                 0.501   G protein-coupled receptor 27 
DRD3                  0.086   dopamine receptor D3 isoform a 
HTR2A                 0.086   5-hydroxytryptamine (serotonin) receptor 2A 
CCKBR                 0.082   cholecystokinin B receptor 
HTR7                  0.080   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.080   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.080   5-hydroxytryptamine receptor 7 isoform a 
HTR2B                 0.080   5-hydroxytryptamine (serotonin) receptor 2B 
CCKAR                 0.078   cholecystokinin A receptor 
DRD3                  0.076   dopamine receptor D3 isoform e 
HTR1F                 0.074   5-hydroxytryptamine (serotonin) receptor 1F 
HTR2C                 0.072   5-hydroxytryptamine (serotonin) receptor 2C 
ADRB1                 0.070   beta-1-adrenergic receptor 
GALR3                 0.068   galanin receptor 3 
ADRA1A                0.068   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.068   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.068   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.068   alpha-1A-adrenergic receptor isoform 3 
HTR1A                 0.067   5-hydroxytryptamine (serotonin) receptor 1A 
MTNR1B                0.067   melatonin receptor 1B 
ADRA2A                0.067   alpha-2A-adrenergic receptor 
HTR1B                 0.066   5-hydroxytryptamine (serotonin) receptor 1B 
ADRA2C                0.066   alpha-2C-adrenergic receptor 
HTR5A                 0.066   5-hydroxytryptamine receptor 5A 
HTR1D                 0.066   5-hydroxytryptamine (serotonin) receptor 1D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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