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Search of human proteins with 46198301
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46198301 hypothetical protein LOC79081 [Homo sapiens]
(263 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46198301 hypothetical protein LOC79081 [Homo sapiens] 563 e-161
gi|149274624 limb bud and heart development homolog [Homo sapiens] 38 0.008
gi|30795231 brain abundant, membrane attached signal protein 1 [... 37 0.023
gi|83816964 Holliday junction recognition protein [Homo sapiens] 33 0.33
gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens] 32 0.43
gi|117938759 GNAS complex locus XLas [Homo sapiens] 32 0.57
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 32 0.74
gi|42263098 Sp6 transcription factor [Homo sapiens] 32 0.74
gi|37674210 slingshot 2 [Homo sapiens] 31 0.96
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 31 1.3
gi|41055953 ubiquitin thioesterase 40 [Homo sapiens] 31 1.3
gi|153070260 myristoylated alanine-rich protein kinase C substra... 31 1.3
gi|9910354 THAP domain containing 10 [Homo sapiens] 31 1.3
gi|215820652 StAR-related lipid transfer (START) domain containi... 31 1.3
gi|215820650 StAR-related lipid transfer (START) domain containi... 31 1.3
gi|31543659 StAR-related lipid transfer (START) domain containin... 31 1.3
gi|163965366 nascent polypeptide-associated complex alpha subuni... 31 1.3
gi|4507577 tumor necrosis factor receptor 2 precursor [Homo sapi... 30 1.6
gi|208431815 protein tyrosine phosphatase, receptor type, K isof... 30 1.6
gi|18860902 protein tyrosine phosphatase, receptor type, K isofo... 30 1.6
gi|185136021 spinster homolog 2 [Homo sapiens] 30 2.1
gi|4557743 Mediterranean fever protein [Homo sapiens] 30 2.1
gi|50843820 sickle tail isoform 1 [Homo sapiens] 30 2.1
gi|48255931 hepatoma-derived growth factor-related protein 2 iso... 30 2.1
gi|169209545 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|169210556 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|169210041 PREDICTED: hypothetical protein [Homo sapiens] 30 2.8
gi|4504789 1D-myo-inositol-trisphosphate 3-kinase A [Homo sapiens] 30 2.8
gi|8923842 forkhead box J2 [Homo sapiens] 30 2.8
gi|4502175 apical protein of Xenopus-like [Homo sapiens] 30 2.8
>gi|46198301 hypothetical protein LOC79081 [Homo sapiens]
Length = 263
Score = 563 bits (1450), Expect = e-161
Identities = 263/263 (100%), Positives = 263/263 (100%)
Query: 1 MALVPGRSKEDGLWTRNSPGSSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPS 60
MALVPGRSKEDGLWTRNSPGSSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPS
Sbjct: 1 MALVPGRSKEDGLWTRNSPGSSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPS 60
Query: 61 IVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQSEEPGWAWSPQDPRSPLRTF 120
IVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQSEEPGWAWSPQDPRSPLRTF
Sbjct: 61 IVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQSEEPGWAWSPQDPRSPLRTF 120
Query: 121 NAGLSWGQDQDEEDACWILEDTACLEATNHCPFWDSTGSRVCRSGFVEYSHLLPPNSFEG 180
NAGLSWGQDQDEEDACWILEDTACLEATNHCPFWDSTGSRVCRSGFVEYSHLLPPNSFEG
Sbjct: 121 NAGLSWGQDQDEEDACWILEDTACLEATNHCPFWDSTGSRVCRSGFVEYSHLLPPNSFEG 180
Query: 181 AEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQHYTVREEAQKTPP 240
AEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQHYTVREEAQKTPP
Sbjct: 181 AEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQHYTVREEAQKTPP 240
Query: 241 ADPACPEREDSHGSGSPFKASQD 263
ADPACPEREDSHGSGSPFKASQD
Sbjct: 241 ADPACPEREDSHGSGSPFKASQD 263
>gi|149274624 limb bud and heart development homolog [Homo sapiens]
Length = 105
Score = 38.1 bits (87), Expect = 0.008
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 55 KSHLPSIVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQSEE 103
K LPSIVVE +E ESG+L P EE L+ D E+++ E ++ E+
Sbjct: 58 KDRLPSIVVEPTEGEVESGELRWPPEEFLVQED-EQDNCEETAKENKEQ 105
>gi|30795231 brain abundant, membrane attached signal protein 1
[Homo sapiens]
Length = 227
Score = 36.6 bits (83), Expect = 0.023
Identities = 23/88 (26%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Query: 175 PNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQHYTVREE 234
P EGA E + P E A+ P G A+ AA P E+ + + +EE
Sbjct: 87 PEKTEGAAEAKAEPPKAPEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPS-KEE 145
Query: 235 AQKTPPADPACPEREDSHGSGSPFKASQ 262
+ PA P +++ G+P S+
Sbjct: 146 GEPKKTEAPAAPAAQETKSDGAPASDSK 173
>gi|83816964 Holliday junction recognition protein [Homo sapiens]
Length = 748
Score = 32.7 bits (73), Expect = 0.33
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
Query: 38 GKIGKVEGHQHIQDFSQKSHLPSIVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFF 97
G++ K IQD S K P+ + S V + LP +L D + + +A
Sbjct: 68 GRLIKERNEGEIQDSSMK---PADRTDGS-VQAAAWGPELPSHRTVLGADSKSGEVDAT- 122
Query: 98 QDQSEEPGWAWSPQDPRSPLR 118
DQ E WA +P P+SPL+
Sbjct: 123 SDQEESVAWALAPAVPQSPLK 143
>gi|209571521 cysteine rich BMP regulator 2 isoform 2 [Homo sapiens]
Length = 814
Score = 32.3 bits (72), Expect = 0.43
Identities = 22/76 (28%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 200 APGGRGCDRPRADHA------APPQEAGVQCTCQHYTVREEAQKTPPA-------DPACP 246
AP GC RP A HA +PP + +C C +V + PPA P CP
Sbjct: 659 APAPAGCPRPGAAHARHQEYFSPPGDPCRRCLCLDGSVSCQRLPCPPAPCAHPRQGPCCP 718
Query: 247 EREDSHGSGSPFKASQ 262
+ G F + +
Sbjct: 719 SCDGCLYQGKEFASGE 734
>gi|117938759 GNAS complex locus XLas [Homo sapiens]
Length = 1037
Score = 32.0 bits (71), Expect = 0.57
Identities = 24/81 (29%), Positives = 31/81 (38%), Gaps = 5/81 (6%)
Query: 174 PPNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAP--PQEAGVQCTCQHYTV 231
P + GA +A PA ++GAA EAP RA H AP P T
Sbjct: 450 PADPDSGAAPDA---PADPDAGAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATR 506
Query: 232 REEAQKTPPADPACPEREDSH 252
+ ++ A PA R H
Sbjct: 507 AAQVRRAASAAPASGARRKIH 527
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 31.6 bits (70), Expect = 0.74
Identities = 21/77 (27%), Positives = 30/77 (38%), Gaps = 13/77 (16%)
Query: 199 EAPGGRGCDRPRADHA------APPQEAGVQCTCQHYTVREEAQKTPPA-------DPAC 245
+ P GC RP A HA +PP + +C C +V + PPA P C
Sbjct: 597 QCPAPAGCPRPGAAHARHQEYFSPPGDPCRRCLCLDGSVSCQRLPCPPAPCAHPRQGPCC 656
Query: 246 PEREDSHGSGSPFKASQ 262
P + G F + +
Sbjct: 657 PSCDGCLYQGKEFASGE 673
>gi|42263098 Sp6 transcription factor [Homo sapiens]
Length = 376
Score = 31.6 bits (70), Expect = 0.74
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 161 VCRSGFVEYSHLLPP-NSFEGAEEEAVQTPAGV-ESGAASEAPGGRG 205
VC F+ HL + EGA+EEA +G ++G A E PGG+G
Sbjct: 318 VCSRVFMRSDHLAKHMKTHEGAKEEAAGAASGEGKAGGAVEPPGGKG 364
>gi|37674210 slingshot 2 [Homo sapiens]
Length = 1423
Score = 31.2 bits (69), Expect = 0.96
Identities = 45/181 (24%), Positives = 64/181 (35%), Gaps = 17/181 (9%)
Query: 45 GHQHIQDFSQKSHLPSIVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQSEEP 104
GH QD + P + +S N E H + L +GE + E Q P
Sbjct: 801 GHME-QDEDSCTAQPELAKDSGMCNPEG--CLTTHSSIADLEEGEPAEGEQELQGSGMHP 857
Query: 105 GWAWSPQDPRSPLRTFNAGLSWGQDQDEEDACWILEDTACLEATNHCPFWDSTGSRVCRS 164
G W P R F L Q+Q+ A T +T DS+ + +
Sbjct: 858 GAKWYPGSVRRATLEFEERLR--QEQEHHGAA----PTCTSLSTRKNSKNDSSVADLAPK 911
Query: 165 GFVEYSHLLPPNSFEGAEEEAVQTP---AGVESGAASEAPGGRGCDRPRA---DHAAPPQ 218
G + P +SF E E + +G E+G+ S + PR DH PQ
Sbjct: 912 G--KSDEAPPEHSFVLKEPEMSKGKGKYSGSEAGSLSHSEQNATVPAPRVLEFDHLPDPQ 969
Query: 219 E 219
E
Sbjct: 970 E 970
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [Homo
sapiens]
Length = 3969
Score = 30.8 bits (68), Expect = 1.3
Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 16/97 (16%)
Query: 17 NSPGSSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPSIVVESSEVNEESGDLH 76
+SP S Q SP +P P + K + + + + K H + S + S + H
Sbjct: 3517 SSPSSGQRSASPSVPGPTKPKPKTKRFQ--LPLDKGNGKKH------KVSHLRTSSSEAH 3568
Query: 77 LPHEELLLLTDG--------EEEDAEAFFQDQSEEPG 105
+P +E LT G E++D + Q +E G
Sbjct: 3569 IPDQETTSLTSGTGTPGAEAEQQDTASVEQSSQKECG 3605
>gi|41055953 ubiquitin thioesterase 40 [Homo sapiens]
Length = 1247
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 156 STGSRVCRSGFVEYSHLLPPNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDR-PRADHA 214
S G + C+ +E H+ P N+ G A+ PAGV ++ PGG G P+ D
Sbjct: 664 SDGEKCCQ--VIESPHVFPANAEVGTVLTALAIPAGVIFINSAGCPGGEGWTAIPKEDMR 721
Query: 215 APPQEAGVQ 223
+E G++
Sbjct: 722 KTFREQGLR 730
>gi|153070260 myristoylated alanine-rich protein kinase C substrate
[Homo sapiens]
Length = 332
Score = 30.8 bits (68), Expect = 1.3
Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 182 EEEAVQTPAGVE---------SGAASEAPGGRGCDRPRADHAAPPQE---AGVQCTCQHY 229
E +A + P+ VE S AA EAP G P AAP +E A C
Sbjct: 254 ETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAP 313
Query: 230 TVREEAQKTPPADPA 244
+ + + +P A PA
Sbjct: 314 SQEAQPECSPEAPPA 328
>gi|9910354 THAP domain containing 10 [Homo sapiens]
Length = 257
Score = 30.8 bits (68), Expect = 1.3
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 174 PPNSFEGAEEEAVQTPAGVESGAASEA-PGGRGCDRPRADHAAPPQEAGVQCTCQHYTVR 232
P EG + + T +++ SEA PG C RPRA Q A Q TC++ V+
Sbjct: 97 PKRGEEGDQAGRLDTRGELQAARHSEAAPGPVSCTRPRAG----KQAAASQITCENELVQ 152
Query: 233 EEAQKTPPAD 242
+ P++
Sbjct: 153 TQPHADNPSN 162
>gi|215820652 StAR-related lipid transfer (START) domain containing
8 isoform b [Homo sapiens]
Length = 1023
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 12/60 (20%)
Query: 54 QKSHLPSIVVESSEVNEE-SGDLHLPHE-ELLLLTDGEEEDAEAFFQDQS--EEPGWAWS 109
Q SH PS+ ES E+N + +G ++L H+ LL LT AF + + + GW WS
Sbjct: 500 QNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLT--------AFMEKYTVPHKQGWVWS 551
>gi|215820650 StAR-related lipid transfer (START) domain containing
8 isoform a [Homo sapiens]
Length = 1103
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 12/60 (20%)
Query: 54 QKSHLPSIVVESSEVNEE-SGDLHLPHE-ELLLLTDGEEEDAEAFFQDQS--EEPGWAWS 109
Q SH PS+ ES E+N + +G ++L H+ LL LT AF + + + GW WS
Sbjct: 580 QNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLT--------AFMEKYTVPHKQGWVWS 631
>gi|31543659 StAR-related lipid transfer (START) domain containing 8
isoform b [Homo sapiens]
Length = 1023
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 12/60 (20%)
Query: 54 QKSHLPSIVVESSEVNEE-SGDLHLPHE-ELLLLTDGEEEDAEAFFQDQS--EEPGWAWS 109
Q SH PS+ ES E+N + +G ++L H+ LL LT AF + + + GW WS
Sbjct: 500 QNSHRPSLNSESLEINRQFAGQINLLHKGSLLRLT--------AFMEKYTVPHKQGWVWS 551
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 30.8 bits (68), Expect = 1.3
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 179 EGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQHYTVREEAQKT 238
+GA TP + G A+ P G P A PP G T H A T
Sbjct: 1238 KGAPTTPAATPPSPKGGPATPPPKGA----PTPPAATPPSLKGGLATPPHKGAPNPAVVT 1293
Query: 239 PPADPACPEREDSHGSGSP 257
PP+ P G+ +P
Sbjct: 1294 PPSPKGGPATSPPKGAPTP 1312
>gi|4507577 tumor necrosis factor receptor 2 precursor [Homo
sapiens]
Length = 461
Score = 30.4 bits (67), Expect = 1.6
Identities = 23/80 (28%), Positives = 31/80 (38%), Gaps = 13/80 (16%)
Query: 4 VPGRSKEDGLWTRNSPGSSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPSI-- 61
+PG + D + T SP S P + LP P+ R QH Q + S PS
Sbjct: 190 IPGNASMDAVCTSTSPTRSMAPGAVHLPQPVSTRS--------QHTQPTPEPSTAPSTSF 241
Query: 62 ---VVESSEVNEESGDLHLP 78
+ S +GD LP
Sbjct: 242 LLPMGPSPPAEGSTGDFALP 261
>gi|208431815 protein tyrosine phosphatase, receptor type, K isoform
a [Homo sapiens]
Length = 1446
Score = 30.4 bits (67), Expect = 1.6
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 21 SSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPSIVVESSEVNEESGDLH---- 76
S+ H E P + + E H + S+ +P + E +E ++G LH
Sbjct: 810 STLHAEDPLSITFMDQHNFSPRYENHSATAESSRLLDVPRYLCEGTESPYQTGQLHPAIR 869
Query: 77 ----LPHEELLLLTD--GEEEDAEAFFQDQS 101
L H L+ +D G +E+ E+FF+ QS
Sbjct: 870 VADLLQHINLMKTSDSYGFKEEYESFFEGQS 900
>gi|18860902 protein tyrosine phosphatase, receptor type, K isoform
b [Homo sapiens]
Length = 1440
Score = 30.4 bits (67), Expect = 1.6
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 21 SSQHPESPRLPNPLWDRGKIGKVEGHQHIQDFSQKSHLPSIVVESSEVNEESGDLH---- 76
S+ H E P + + E H + S+ +P + E +E ++G LH
Sbjct: 810 STLHAEDPLSITFMDQHNFSPRYENHSATAESSRLLDVPRYLCEGTESPYQTGQLHPAIR 869
Query: 77 ----LPHEELLLLTD--GEEEDAEAFFQDQS 101
L H L+ +D G +E+ E+FF+ QS
Sbjct: 870 VADLLQHINLMKTSDSYGFKEEYESFFEGQS 900
>gi|185136021 spinster homolog 2 [Homo sapiens]
Length = 549
Score = 30.0 bits (66), Expect = 2.1
Identities = 24/84 (28%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Query: 180 GAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQHYTVREEAQKTP 239
GAEEE A GG GC R A AG + +VR P
Sbjct: 13 GAEEEEADAERRRRRRGAQRGAGGSGCCGARGAGGAGVSAAGDEVQTLSGSVRRAPTGPP 72
Query: 240 --PADPACPEREDSHGSGSPFKAS 261
P P C G+ P AS
Sbjct: 73 GTPGTPGCAATAKGPGAQQPKPAS 96
>gi|4557743 Mediterranean fever protein [Homo sapiens]
Length = 781
Score = 30.0 bits (66), Expect = 2.1
Identities = 21/84 (25%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Query: 175 PNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQEAGVQCTCQH-YTVRE 233
P GA + + P E P R A P V+ +C V
Sbjct: 281 PTPDGGASADLKEGPGNPEHSVTGRPPDTAASPRCHAQEGDPVDGTCVRDSCSFPEAVSG 340
Query: 234 EAQKTPPADPACPEREDSHGSGSP 257
Q + P CP +DSH SP
Sbjct: 341 HPQASGSRSPGCPRCQDSHERKSP 364
>gi|50843820 sickle tail isoform 1 [Homo sapiens]
Length = 1943
Score = 30.0 bits (66), Expect = 2.1
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 54 QKSHLPSIVVESSEVNEESGDLHLPHEELLLLTDGEEEDAEAFFQDQS-----EEPGWAW 108
++S+LP S SGD+ + + EDA Q ++ EEP AW
Sbjct: 1053 RRSYLPG----SGLTTTRSGDVVYTGRKENITAKASSEDAGPSPQTRATKYPAEEPASAW 1108
Query: 109 SPQDPRSPLRTFNAGLSWGQDQDEEDACWILEDTACLEATNHCPFWD 155
+P P P+ T + S ++++EE+ I+ + L+A C F D
Sbjct: 1109 TPSPP--PVTTSS---SKDEEEEEEEGDKIMAE---LQAFQKCSFMD 1147
>gi|48255931 hepatoma-derived growth factor-related protein 2
isoform 1 [Homo sapiens]
Length = 671
Score = 30.0 bits (66), Expect = 2.1
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Query: 180 GAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAPPQ-EAGVQCTCQHYTVREEAQKT 238
G E+E + E A EAP + D+P D +AP EA Q E +
Sbjct: 565 GMEKEKAEEKLAGEELAGEEAPQEKAEDKPSTDLSAPVNGEATSQKGESAEDKEHEEGRD 624
Query: 239 PPADPACPEREDSHGS 254
P C ED H S
Sbjct: 625 SEEGPRCGSSEDLHDS 640
>gi|169209545 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 170 SHLLPPNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAP--PQEAGVQCTCQ 227
SH P S G +V++P G A + APG + P + +P P EAG C
Sbjct: 17 SHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCAST 76
Query: 228 HYTVREEAQKTPPADPA 244
V + P+ PA
Sbjct: 77 GRQVGVSGAGSSPSGPA 93
>gi|169210556 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 170 SHLLPPNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAP--PQEAGVQCTCQ 227
SH P S G +V++P G A + APG + P + +P P EAG C
Sbjct: 17 SHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCAST 76
Query: 228 HYTVREEAQKTPPADPA 244
V + P+ PA
Sbjct: 77 GRQVGVSGAGSSPSGPA 93
>gi|169210041 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 170 SHLLPPNSFEGAEEEAVQTPAGVESGAASEAPGGRGCDRPRADHAAP--PQEAGVQCTCQ 227
SH P S G +V++P G A + APG + P + +P P EAG C
Sbjct: 17 SHGPAPQSSVGGLLVSVKSPPGDVHAARACAPGRHSGEGPPQGNLSPSCPAEAGHGCAST 76
Query: 228 HYTVREEAQKTPPADPA 244
V + P+ PA
Sbjct: 77 GRQVGVSGAGSSPSGPA 93
>gi|4504789 1D-myo-inositol-trisphosphate 3-kinase A [Homo sapiens]
Length = 461
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 10/65 (15%)
Query: 190 AGVESGAASEAPGGRGCDR-----PRADHAAPPQEAGVQCTCQHYTVREEAQKTPPADPA 244
A V + AA+ P RG R P APP Q T V E PP P
Sbjct: 43 AAVAAAAAAGEPRARGAKRRGGQVPNGLPRAPPAPVIPQLT-----VTAEEPDVPPTSPG 97
Query: 245 CPERE 249
PERE
Sbjct: 98 PPERE 102
>gi|8923842 forkhead box J2 [Homo sapiens]
Length = 574
Score = 29.6 bits (65), Expect = 2.8
Identities = 23/100 (23%), Positives = 34/100 (34%), Gaps = 15/100 (15%)
Query: 174 PPNSFEGAEEEA-VQTPAGVESGAASEAPGGRGCDRPRADHAA--------------PPQ 218
PP + +++A Q P+ V P GC P A PP
Sbjct: 311 PPQQSQPQQQQAPAQGPSAVGGAPPLHTPSTDGCTPPGGKQAGAEGYGPPPVMAMHPPPL 370
Query: 219 EAGVQCTCQHYTVREEAQKTPPADPACPEREDSHGSGSPF 258
+ G QH+ AQ+ PP P + + +G F
Sbjct: 371 QHGGYHPHQHHPHSHPAQQPPPPQPQAQGQAPINNTGFAF 410
>gi|4502175 apical protein of Xenopus-like [Homo sapiens]
Length = 1616
Score = 29.6 bits (65), Expect = 2.8
Identities = 12/23 (52%), Positives = 13/23 (56%)
Query: 11 DGLWTRNSPGSSQHPESPRLPNP 33
D SPGS QHP S + PNP
Sbjct: 967 DAQCREGSPGSQQHPPSQKAPNP 989
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.130 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,834,985
Number of Sequences: 37866
Number of extensions: 753345
Number of successful extensions: 2446
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 2402
Number of HSP's gapped (non-prelim): 106
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.