Guide to the Human Genome
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Name: SSH2 Sequence: fasta or formatted (1423aa) NCBI GI: 37674210
Description:

slingshot 2

Referenced in:

Dual-Specificity Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         77           2
 C cysteine            2.0         29           2
 D aspartate           5.1         73           2
 E glutamate           9.4        134           3
 F phenylalanine       2.7         38           2
 G glycine             5.1         72           3
 H histidine           3.7         53           2
 I isoleucine          3.7         53           2
 K lysine              5.0         71           2
 L leucine             9.2        131           3
 M methionine          2.6         37           2
 N asparagine          3.9         56           1
 P proline             7.1        101           2
 Q glutamine           4.9         70           2
 R arginine            4.8         69           2
 S serine             11.4        162           4
 T threonine           6.0         86           3
 V valine              5.3         75           3
 W tryptophan          0.7         10           1
 Y tyrosine            1.8         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   slingshot 2 
SSH1                  0.229   slingshot 1 isoform 1 
SSH1                  0.229   slingshot 1 isoform 2 
SSH1                  0.218   slingshot 1 isoform 3 
SSH3                  0.139   slingshot homolog 3 
DUSP2                 0.030   dual specificity phosphatase 2 
DUSP1                 0.029   dual specificity phosphatase 1 
DUSP9                 0.027   dual specificity phosphatase 9 
DUSP10                0.026   dual specificity phosphatase 10 isoform a 
DUSP4                 0.026   dual specificity phosphatase 4 isoform 1 
DUSP4                 0.026   dual specificity phosphatase 4 isoform 2 
DUSP5                 0.026   dual specificity phosphatase 5 
DUSP7                 0.025   dual specificity phosphatase 7 
DUSP6                 0.025   dual specificity phosphatase 6 isoform a 
DUSP16                0.023   dual specificity phosphatase 16 
DUSP14                0.023   dual specificity phosphatase 14 
DUSP19                0.023   dual specificity phosphatase 19 isoform 1 
DUSP28                0.022   dual specificity phosphatase 28 
DUSP8                 0.022   dual specificity phosphatase 8 
LOC100290651          0.021   PREDICTED: hypothetical protein XP_002347464 
STYX                  0.021   serine/threonine/tyrosine interacting protein [Homo...
STYX                  0.021   serine/threonine/tyrosine interacting protein 
DUSP10                0.021   dual specificity phosphatase 10 isoform b 
DUSP10                0.021   dual specificity phosphatase 10 isoform b 
DUSP22                0.018   dual specificity phosphatase 22 
DUSP15                0.017   dual specificity phosphatase 15 isoform a 
DUSP26                0.016   dual specificity phosphatase 26 
DUSP21                0.015   dual specificity phosphatase 21 
DUSP13                0.014   muscle-restricted dual specificity phosphatase isofo...
DUSP18                0.014   dual specificity phosphatase 18 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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