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Search of human proteins with 46094014
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46094014 peptide chain release factor 3 [Homo sapiens]
(628 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46094014 peptide chain release factor 3 [Homo sapiens] 1269 0.0
gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens] 1108 0.0
gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens] 1102 0.0
gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens] 957 0.0
gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform... 347 2e-95
gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1... 347 2e-95
gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [H... 306 4e-83
gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [H... 303 4e-82
gi|239757543 PREDICTED: similar to eukaryotic translation elonga... 268 1e-71
gi|34147630 Tu translation elongation factor, mitochondrial prec... 117 2e-26
gi|169162126 PREDICTED: similar to hCG1981735 [Homo sapiens] 70 8e-12
gi|169162824 PREDICTED: similar to hCG1981735 [Homo sapiens] 70 8e-12
gi|239752724 PREDICTED: similar to hCG1981735 [Homo sapiens] 68 2e-11
gi|82546879 GTP binding protein 1 [Homo sapiens] 68 3e-11
gi|45593140 GTP binding protein 2 [Homo sapiens] 64 4e-10
gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 57 5e-08
gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 57 5e-08
gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens] 57 5e-08
gi|157426893 GUF1 GTPase homolog [Homo sapiens] 55 3e-07
gi|54607086 eukaryotic elongation factor, selenocysteine-tRNA-sp... 51 3e-06
gi|4503507 eukaryotic translation initiation factor 2, subunit 3... 51 4e-06
gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens] 50 8e-06
gi|53729339 mitochondrial translational initiation factor 2 prec... 49 1e-05
gi|53729337 mitochondrial translational initiation factor 2 prec... 49 1e-05
gi|49472835 bridging integrator 2 [Homo sapiens] 42 0.001
gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo s... 42 0.002
gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo s... 42 0.002
gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo s... 42 0.002
gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sap... 42 0.002
gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sap... 42 0.002
>gi|46094014 peptide chain release factor 3 [Homo sapiens]
Length = 628
Score = 1269 bits (3284), Expect = 0.0
Identities = 628/628 (100%), Positives = 628/628 (100%)
Query: 1 MDSGSSSSDSAPDCWDQVDMESPGSAPSGDGVSSAVAEAQREPLSSAFSRKLNVNAKPFV 60
MDSGSSSSDSAPDCWDQVDMESPGSAPSGDGVSSAVAEAQREPLSSAFSRKLNVNAKPFV
Sbjct: 1 MDSGSSSSDSAPDCWDQVDMESPGSAPSGDGVSSAVAEAQREPLSSAFSRKLNVNAKPFV 60
Query: 61 PNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVS 120
PNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVS
Sbjct: 61 PNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVS 120
Query: 121 LEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMM 180
LEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMM
Sbjct: 121 LEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMM 180
Query: 181 EEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYER 240
EEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYER
Sbjct: 181 EEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYER 240
Query: 241 EAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIG 300
EAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIG
Sbjct: 241 EAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIG 300
Query: 301 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSI 360
GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSI
Sbjct: 301 GASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSI 360
Query: 361 ERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNL 420
ERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNL
Sbjct: 361 ERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNL 420
Query: 421 PNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDT 480
PNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDT
Sbjct: 421 PNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDT 480
Query: 481 ETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYN 540
ETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYN
Sbjct: 481 ETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYN 540
Query: 541 AVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 600
AVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF
Sbjct: 541 AVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDF 600
Query: 601 PQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
PQMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 601 PQMGRFTLRDEGKTIAIGKVLKLVPEKD 628
>gi|194018520 G1 to S phase transition 1 isoform 1 [Homo sapiens]
Length = 637
Score = 1108 bits (2865), Expect = 0.0
Identities = 553/627 (88%), Positives = 575/627 (91%), Gaps = 9/627 (1%)
Query: 3 SGSSSSDSAPDCWDQVDMESPGSAPSGDGVS-SAVAEAQREPLSSAFSRKLNVNAKPFVP 61
SGSSSSDSAPDCWDQ DME+PG P G G S +A AEAQRE LS+AFSR+LNVNAKPFVP
Sbjct: 19 SGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVP 78
Query: 62 NVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVSL 121
NVHAAEFVPSFLRGP PP G+ +N +GAG GR APVE S+EE +
Sbjct: 79 NVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAG-------GRAAPVESSQEEQSLC- 130
Query: 122 EGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMME 181
EGSNSAV+MELSEP+VENGE EM+ EESWEH +E+SEAEPGGGS GD PPEES EMME
Sbjct: 131 EGSNSAVSMELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME 190
Query: 182 EKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYERE 241
E+EEI K KSV+ P GAPKKEHVNVVFIGHVDAGKSTIGGQIM+LTGMVDKRTLEKYERE
Sbjct: 191 EEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYERE 250
Query: 242 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGG 301
AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE+KHFTILDAPGHKSFVPNMIGG
Sbjct: 251 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGG 310
Query: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWS E
Sbjct: 311 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 370
Query: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLP 421
RYEECKEKLVPFLKKVGF+PKKDIHFMPCSGLTGAN+KEQSDFCPWY GLPFIPYLDNLP
Sbjct: 371 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLP 430
Query: 422 NFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTE 481
NFNRS+DGPIRLPIVDKYKDMGTVVLGKLESGSI KGQQLVMMPNKHNVEVLGILSDD E
Sbjct: 431 NFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVE 490
Query: 482 TDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNA 541
TD VAPGENLKIRLKGIEEEEILPGFILCDP+NLCHSGRTFD QIVIIEHKSIICPGYNA
Sbjct: 491 TDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNA 550
Query: 542 VLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 601
VLHIHTCIEEVEITALI LVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP
Sbjct: 551 VLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 610
Query: 602 QMGRFTLRDEGKTIAIGKVLKLVPEKD 628
QMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 611 QMGRFTLRDEGKTIAIGKVLKLVPEKD 637
>gi|194097354 G1 to S phase transition 1 isoform 2 [Homo sapiens]
Length = 636
Score = 1102 bits (2849), Expect = 0.0
Identities = 552/627 (88%), Positives = 574/627 (91%), Gaps = 10/627 (1%)
Query: 3 SGSSSSDSAPDCWDQVDMESPGSAPSGDGVS-SAVAEAQREPLSSAFSRKLNVNAKPFVP 61
SGSSSSDSAPDCWDQ DME+PG P G G S +A AEAQRE LS+AFSR+LNVNAKPFVP
Sbjct: 19 SGSSSSDSAPDCWDQADMEAPGPGPCGGGGSLAAAAEAQRENLSAAFSRQLNVNAKPFVP 78
Query: 62 NVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKRMGRGAPVEPSREEPLVSL 121
NVHAAEFVPSFLRGP PP G+ +N +GAG GR APVE S+EE +
Sbjct: 79 NVHAAEFVPSFLRGPAAPPPPAGGAANNHGAGSGAG-------GRAAPVESSQEEQSLC- 130
Query: 122 EGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMME 181
EGSNSAV+MELSEP+ ENGE EM+ EESWEH +E+SEAEPGGGS GD PPEES EMME
Sbjct: 131 EGSNSAVSMELSEPI-ENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMME 189
Query: 182 EKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYERE 241
E+EEI K KSV+ P GAPKKEHVNVVFIGHVDAGKSTIGGQIM+LTGMVDKRTLEKYERE
Sbjct: 190 EEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYERE 249
Query: 242 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGG 301
AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETE+KHFTILDAPGHKSFVPNMIGG
Sbjct: 250 AKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGG 309
Query: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWS E
Sbjct: 310 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNE 369
Query: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLP 421
RYEECKEKLVPFLKKVGF+PKKDIHFMPCSGLTGAN+KEQSDFCPWY GLPFIPYLDNLP
Sbjct: 370 RYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLP 429
Query: 422 NFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTE 481
NFNRS+DGPIRLPIVDKYKDMGTVVLGKLESGSI KGQQLVMMPNKHNVEVLGILSDD E
Sbjct: 430 NFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVE 489
Query: 482 TDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNA 541
TD VAPGENLKIRLKGIEEEEILPGFILCDP+NLCHSGRTFD QIVIIEHKSIICPGYNA
Sbjct: 490 TDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNA 549
Query: 542 VLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 601
VLHIHTCIEEVEITALI LVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP
Sbjct: 550 VLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFP 609
Query: 602 QMGRFTLRDEGKTIAIGKVLKLVPEKD 628
QMGRFTLRDEGKTIAIGKVLKLVPEKD
Sbjct: 610 QMGRFTLRDEGKTIAIGKVLKLVPEKD 636
>gi|194018522 G1 to S phase transition 1 isoform 3 [Homo sapiens]
Length = 499
Score = 957 bits (2474), Expect = 0.0
Identities = 468/499 (93%), Positives = 480/499 (96%)
Query: 130 MELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQEMMEEKEEIRKS 189
MELSEP+VENGE EM+ EESWEH +E+SEAEPGGGS GD PPEES EMMEE+EEI K
Sbjct: 1 MELSEPIVENGETEMSPEESWEHKEEISEAEPGGGSLGDGRPPEESAHEMMEEEEEIPKP 60
Query: 190 KSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRET 249
KSV+ P GAPKKEHVNVVFIGHVDAGKSTIGGQIM+LTGMVDKRTLEKYEREAKEKNRET
Sbjct: 61 KSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRET 120
Query: 250 WYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAV 309
WYLSWALDTNQEERDKGKTVEVGRAYFETE+KHFTILDAPGHKSFVPNMIGGASQADLAV
Sbjct: 121 WYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAV 180
Query: 310 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEECKEK 369
LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWS ERYEECKEK
Sbjct: 181 LVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSNERYEECKEK 240
Query: 370 LVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPYLDNLPNFNRSIDG 429
LVPFLKKVGF+PKKDIHFMPCSGLTGAN+KEQSDFCPWY GLPFIPYLDNLPNFNRS+DG
Sbjct: 241 LVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCPWYIGLPFIPYLDNLPNFNRSVDG 300
Query: 430 PIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFVAPGE 489
PIRLPIVDKYKDMGTVVLGKLESGSI KGQQLVMMPNKHNVEVLGILSDD ETD VAPGE
Sbjct: 301 PIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPNKHNVEVLGILSDDVETDTVAPGE 360
Query: 490 NLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCI 549
NLKIRLKGIEEEEILPGFILCDP+NLCHSGRTFD QIVIIEHKSIICPGYNAVLHIHTCI
Sbjct: 361 NLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQIVIIEHKSIICPGYNAVLHIHTCI 420
Query: 550 EEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR 609
EEVEITALI LVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR
Sbjct: 421 EEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLR 480
Query: 610 DEGKTIAIGKVLKLVPEKD 628
DEGKTIAIGKVLKLVPEKD
Sbjct: 481 DEGKTIAIGKVLKLVPEKD 499
>gi|223555963 Hsp70 subfamily B suppressor 1-like protein isoform 2
[Homo sapiens]
Length = 642
Score = 347 bits (890), Expect = 2e-95
Identities = 197/511 (38%), Positives = 296/511 (57%), Gaps = 18/511 (3%)
Query: 120 SLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQ-- 177
S E +S T + P+ + LE + + + + S P ++SG+
Sbjct: 141 SEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGKLR 200
Query: 178 EMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEK 237
+ ++ K E+ K + K+ +N+V IGHVDAGKST+ G +++L G ++KRT+ K
Sbjct: 201 QQIDVKAELEKRQG--------GKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHK 252
Query: 238 YEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPN 297
YE+E+K+ + ++ +W LD EER++G T++VG FET K T++DAPGHK F+PN
Sbjct: 253 YEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPN 312
Query: 298 MIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVN 357
MI GA+QAD+AVLV+ A +GEFE GFE GGQTREH +L ++ GV L V +NKMD VN
Sbjct: 313 MITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ--VN 370
Query: 358 WSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANI---KEQSDFCPWYTGLPFI 414
W ER++E KL FLK+ GF + D+ F+P SGL+G N+ + S+ WY GL +
Sbjct: 371 WQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLL 429
Query: 415 PYLDNLPNFNRSIDGPIRLPIVDKYKDMGT--VVLGKLESGSIFKGQQLVMMPNKHNVEV 472
+D+ RSID P RL + D +KD G+ + GK+E+G I G +L+ MP V
Sbjct: 430 EQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTV 489
Query: 473 LGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHK 532
GI D D+ A G+++ + L G++ +I G I C P + F +I+I +
Sbjct: 490 KGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIE 549
Query: 533 SIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI 592
I G+ +LH T E I LIS+++K +GE +K +P+F+ + Q + L+T I
Sbjct: 550 IPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPI 609
Query: 593 CLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 623
LE +KDF ++GRF LR G TIA G V ++
Sbjct: 610 ALELYKDFKELGRFMLRYGGSTIAAGVVTEI 640
>gi|5729864 Hsp70 subfamily B suppressor 1-like protein isoform 1
[Homo sapiens]
Length = 684
Score = 347 bits (890), Expect = 2e-95
Identities = 197/511 (38%), Positives = 296/511 (57%), Gaps = 18/511 (3%)
Query: 120 SLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGGGSSGDSGPPEESGQ-- 177
S E +S T + P+ + LE + + + + S P ++SG+
Sbjct: 183 SEENGHSFHTPQKGPPIEDAIASSDVLETASKSANPPHTIQASEEQSSTPAPVKKSGKLR 242
Query: 178 EMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEK 237
+ ++ K E+ K + K+ +N+V IGHVDAGKST+ G +++L G ++KRT+ K
Sbjct: 243 QQIDVKAELEKRQG--------GKQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHK 294
Query: 238 YEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPN 297
YE+E+K+ + ++ +W LD EER++G T++VG FET K T++DAPGHK F+PN
Sbjct: 295 YEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPN 354
Query: 298 MIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVN 357
MI GA+QAD+AVLV+ A +GEFE GFE GGQTREH +L ++ GV L V +NKMD VN
Sbjct: 355 MITGAAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQ--VN 412
Query: 358 WSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANI---KEQSDFCPWYTGLPFI 414
W ER++E KL FLK+ GF + D+ F+P SGL+G N+ + S+ WY GL +
Sbjct: 413 WQQERFQEITGKLGHFLKQAGFK-ESDVGFIPTSGLSGENLITRSQSSELTKWYKGLCLL 471
Query: 415 PYLDNLPNFNRSIDGPIRLPIVDKYKDMGT--VVLGKLESGSIFKGQQLVMMPNKHNVEV 472
+D+ RSID P RL + D +KD G+ + GK+E+G I G +L+ MP V
Sbjct: 472 EQIDSFKPPQRSIDKPFRLCVSDVFKDQGSGFCITGKIEAGYIQTGDRLLAMPPNETCTV 531
Query: 473 LGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSNLCHSGRTFDVQIVIIEHK 532
GI D D+ A G+++ + L G++ +I G I C P + F +I+I +
Sbjct: 532 KGITLHDEPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKVPIKACTRFRARILIFNIE 591
Query: 533 SIICPGYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTI 592
I G+ +LH T E I LIS+++K +GE +K +P+F+ + Q + L+T I
Sbjct: 592 IPITKGFPVLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKFLTKGQNALVELQTQRPI 651
Query: 593 CLETFKDFPQMGRFTLRDEGKTIAIGKVLKL 623
LE +KDF ++GRF LR G TIA G V ++
Sbjct: 652 ALELYKDFKELGRFMLRYGGSTIAAGVVTEI 682
>gi|4503471 eukaryotic translation elongation factor 1 alpha 1 [Homo
sapiens]
Length = 462
Score = 306 bits (784), Expect = 4e-83
Identities = 166/443 (37%), Positives = 255/443 (57%), Gaps = 17/443 (3%)
Query: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259
+K H+N+V IGHVD+GKST G +++ G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 260 QEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 319
+ ER++G T+++ FET + + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 320 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGF 379
E G K GQTREHA+LA T GVK LIV +NKMD +S +RYEE +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEIVKEVSTYIKKIGY 183
Query: 380 SPKKDIHFMPCSGLTGANIKEQSDFCPWY------------TGLPFIPYLDNLPNFNRSI 427
+P + F+P SG G N+ E S PW+ +G + LD + R
Sbjct: 184 NP-DTVAFVPISGWNGDNMLEPSANMPWFKGWKVTRKDGNASGTTLLEALDCILPPTRPT 242
Query: 428 DGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFV 485
D P+RLP+ D YK +GTV +G++E+G + G + P EV +
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPVNVTTEVKSVEMHHEALSEA 302
Query: 486 APGENLKIRLKGIEEEEILPGFILCDPSN-LCHSGRTFDVQIVIIEHKSIICPGYNAVLH 544
PG+N+ +K + +++ G + D N F Q++I+ H I GY VL
Sbjct: 303 LPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQISAGYAPVLD 362
Query: 545 IHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG 604
HT + L +D++SG+K + P+F+K I + +C+E+F D+P +G
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIVDMVPGKPMCVESFSDYPPLG 422
Query: 605 RFTLRDEGKTIAIGKVLKLVPEK 627
RF +RD +T+A+G V+K V +K
Sbjct: 423 RFAVRDMRQTVAVG-VIKAVDKK 444
>gi|4503475 eukaryotic translation elongation factor 1 alpha 2 [Homo
sapiens]
Length = 463
Score = 303 bits (775), Expect = 4e-82
Identities = 163/443 (36%), Positives = 256/443 (57%), Gaps = 17/443 (3%)
Query: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259
+K H+N+V IGHVD+GKST G +++ G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 260 QEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 319
+ ER++G T+++ FET + + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 320 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGF 379
E G K GQTREHA+LA T GVK LIV +NKMD +S +RY+E +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGY 183
Query: 380 SPKKDIHFMPCSGLTGANIKEQSDFCPWY------------TGLPFIPYLDNLPNFNRSI 427
+P + F+P SG G N+ E S PW+ +G+ + LD + R
Sbjct: 184 NP-ATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGVSLLEALDTILPPTRPT 242
Query: 428 DGPIRLPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDDTETDFV 485
D P+RLP+ D YK +GTV +G++E+G + G + P EV +
Sbjct: 243 DKPLRLPLQDVYKIGGIGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHHEALSEA 302
Query: 486 APGENLKIRLKGIEEEEILPGFILCD-PSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLH 544
PG+N+ +K + ++I G + D S+ F Q++I+ H I GY+ V+
Sbjct: 303 LPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAGYSPVID 362
Query: 545 IHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMG 604
HT + L +D++SG+K + P+ +K I + +C+E+F +P +G
Sbjct: 363 CHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFSQYPPLG 422
Query: 605 RFTLRDEGKTIAIGKVLKLVPEK 627
RF +RD +T+A+G V+K V +K
Sbjct: 423 RFAVRDMRQTVAVG-VIKNVEKK 444
>gi|239757543 PREDICTED: similar to eukaryotic translation
elongation factor 1 alpha 2 [Homo sapiens]
Length = 444
Score = 268 bits (685), Expect = 1e-71
Identities = 152/444 (34%), Positives = 235/444 (52%), Gaps = 34/444 (7%)
Query: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259
+K H+N+V IGHVD+GKST G +++ G +DKRT+EK+E+EA E + ++ +W LD
Sbjct: 4 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVLDKL 63
Query: 260 QEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEF 319
+ ER++G T+++ FET + + TI+DAPGH+ F+ NMI G SQAD AVL+++A GEF
Sbjct: 64 KAERERGITIDISLWKFETTKYYITIIDAPGHRDFIKNMITGTSQADCAVLIVAAGVGEF 123
Query: 320 ETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGF 379
E G K GQTREHA+LA T GVK LIV +NKMD +S +RY+E +++ ++KK+G+
Sbjct: 124 EAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPAYSEKRYDEIVKEVSAYIKKIGY 183
Query: 380 SPKKDIHFMPCSGLTGANIKEQSDFCPWYTG--------------------LPFIPYLDN 419
+P + F+P SG G N+ E S PW+ G P IP
Sbjct: 184 NP-ATVPFVPISGWHGDNMLEPSPNMPWFKGWKVERKEGNASGXRLCPRISCPSIPSGPT 242
Query: 420 LPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHNVEVLGILSDD 479
P+ G +GTV +G++E+G + G + P EV +
Sbjct: 243 FPSHPLPSAG------------IGTVPVGRVETGILRPGMVVTFAPVNITTEVKSVEMHH 290
Query: 480 TETDFVAPGENLKIRLKGIEEEEILPGFILCD-PSNLCHSGRTFDVQIVIIEHKSIICPG 538
PG+N+ +K + ++I G + D S+ F Q++I+ H I G
Sbjct: 291 EALSEALPGDNVGFNVKNVSVKDIRRGNVCGDSKSDPPQEAAQFTSQVIILNHPGQISAG 350
Query: 539 YNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFK 598
Y+ V+ HT + L +D++SG+K + P+ +K I + +C+E+F
Sbjct: 351 YSPVIDCHTAHIACKFAELKEKIDRRSGKKLEDNPKSLKSGDAAIVEMVPGKPMCVESFS 410
Query: 599 DFPQMGRFTLRDEGKTIAIGKVLK 622
+P +G E K+ GKV K
Sbjct: 411 QYPPLGEPGWSGEKKSGGAGKVTK 434
>gi|34147630 Tu translation elongation factor, mitochondrial
precursor [Homo sapiens]
Length = 455
Score = 117 bits (294), Expect = 2e-26
Identities = 93/327 (28%), Positives = 144/327 (44%), Gaps = 47/327 (14%)
Query: 201 KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQ 260
K HVNV IGHVD GK+T+ I + +KYE +D
Sbjct: 58 KPHVNVGTIGHVDHGKTTLTAAITKILAEGGGAKFKKYEE---------------IDNAP 102
Query: 261 EERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFE 320
EER +G T+ + T +H+ D PGH +V NMI G + D +LV++A G
Sbjct: 103 EERARGITINAAHVEYSTAARHYAHTDCPGHADYVKNMITGTAPLDGCILVVAANDGPMP 162
Query: 321 TGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYE-ECKEKLVPFLKKVGF 379
QTREH +LA+ GV+H++V +NK D + +E E E +E L F K
Sbjct: 163 -------QTREHLLLARQIGVEHVVVYVNKADAVQDSEMVELVELEIRELLTEFGYKGEE 215
Query: 380 SPKKDIHFMPCSGLTG-------ANIKEQSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIR 432
+P I L G ++++ D Y +P R ++ P
Sbjct: 216 TPV--IVGSALCALEGRDPELGLKSVQKLLDAVDTYIPVP-----------ARDLEKPFL 262
Query: 433 LPIVDKYK--DMGTVVLGKLESGSIFKGQQLVMMPNKHNVE--VLGILSDDTETDFVAPG 488
LP+ Y GTVV G LE G + KG + ++ + N+ V GI + G
Sbjct: 263 LPVEAVYSVPGRGTVVTGTLERGILKKGDECELLGHSKNIRTVVTGIEMFHKSLERAEAG 322
Query: 489 ENLKIRLKGIEEEEILPGFILCDPSNL 515
+NL ++G++ E++ G ++ P ++
Sbjct: 323 DNLGALVRGLKREDLRRGLVMVKPGSI 349
>gi|169162126 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 69.7 bits (169), Expect = 8e-12
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
+ Q D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S
Sbjct: 44 SGQEDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKE 400
+EE +++ ++KK+ ++ + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|169162824 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 69.7 bits (169), Expect = 8e-12
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
+ Q D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S
Sbjct: 44 SGQEDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKE 400
+EE +++ ++KK+ ++ + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|239752724 PREDICTED: similar to hCG1981735 [Homo sapiens]
Length = 155
Score = 68.2 bits (165), Expect = 2e-11
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 302 ASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIE 361
+ + D AVL++++ GE E G K Q EH +LA T G+K LIV +NKMD +S
Sbjct: 44 SGREDCAVLIVASGVGECEAGISKNKQICEHTLLAYTLGMKQLIVTVNKMDITEPPYSST 103
Query: 362 RYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKE 400
+EE +++ ++KK+ ++ + + F+P SG G N+ E
Sbjct: 104 CFEEISKEVKAYIKKISYN-SQTLPFVPISGWHGDNMLE 141
>gi|82546879 GTP binding protein 1 [Homo sapiens]
Length = 669
Score = 67.8 bits (164), Expect = 3e-11
Identities = 112/485 (23%), Positives = 180/485 (37%), Gaps = 116/485 (23%)
Query: 204 VNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEER 263
V V +G+VDAGKST L G++ L+ A++K L ++ E
Sbjct: 161 VRVAVVGNVDAGKST-------LLGVLTHGELDNGRGFARQK----------LFRHKHEI 203
Query: 264 DKGKTVEVGRAYF-------------------------ETERKHFTILDAPGHKSFVPNM 298
+ G+T VG E K T +D GH+ ++
Sbjct: 204 ESGRTSSVGNDILGFDSEGNVVNKPDSHGGSLEWTKICEKSTKVITFIDLAGHEKYLKTT 263
Query: 299 IGGAS--QADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTV 356
+ G + D +L++ + G G T+EH LA V + V++ K+D
Sbjct: 264 VFGMTGHLPDFCMLMVGSNAGIV-------GMTKEHLGLALALNVP-VFVVVTKIDMCPA 315
Query: 357 NWSIERYEECKEKL-VPFLKKV---------------GFSPKKDIHFMPCSGLTGANIKE 400
N E + + L P +K+ FS ++ S +TG N+
Sbjct: 316 NILQETLKLLQRLLKSPGCRKIPVLVQSKDDVIVTASNFSSERMCPIFQISNVTGENL-- 373
Query: 401 QSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVVLGKLESGSIFKG 458
D + L P + + P I D Y +GTVV G G I
Sbjct: 374 --DLLKMFLNL-------LSPRTSYREEEPAEFQIDDTYSVPGVGTVVSGTTLRGLIKLN 424
Query: 459 QQLVMMP----NKHNVEVLGILSDDTETDFVAPGENLKIRLKGIEEEEILPGFILCDPSN 514
L++ P N ++ V I V G+ LK I+ I G ++ P
Sbjct: 425 DTLLLGPDPLGNFLSIAVKSIHRKRMPVKEVRGGQTASFALKKIKRSSIRKGMVMVSPRL 484
Query: 515 LCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVDK---KSGEKSKT 571
+ F+ +I+++ H + I P Y A++H + + TA I +DK ++G+K+
Sbjct: 485 NPQASWEFEAEILVLHHPTTISPRYQAMVHCGS----IRQTATILSMDKDCLRTGDKATV 540
Query: 572 RPRFVKQ------DQVCI---ARLRTAGTI--CLETFKDFP-------------QMGRFT 607
RF+K DQ + R + GTI L+T + P + G T
Sbjct: 541 HFRFIKTPEYLHIDQRLVFREGRTKAVGTITKLLQTTNNSPMNSKPQQIKMQSTKKGPLT 600
Query: 608 LRDEG 612
RDEG
Sbjct: 601 KRDEG 605
>gi|45593140 GTP binding protein 2 [Homo sapiens]
Length = 602
Score = 63.9 bits (154), Expect = 4e-10
Identities = 100/439 (22%), Positives = 178/439 (40%), Gaps = 53/439 (12%)
Query: 177 QEMMEEKEEIRKSKSVIVPSGAPKKEHVN--VVFIGHVDAGKSTIGGQIMFLTGMVD--- 231
+E+ + + RK V+V ++ ++ V +G+VD+GKST+ G + G +D
Sbjct: 144 REVDYDSDMPRKITEVLVRKVPDNQQFLDLRVAVLGNVDSGKSTLLG--VLTQGELDNGR 201
Query: 232 -KRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVE-----VGRAYFETERKHFTI 285
+ L + + ++ T +S+ + KG+ V E+ K T
Sbjct: 202 GRARLNLFRHLHEIQSGRTSSISFEI---LGFNSKGEVVNYSDSRTAEEICESSSKMITF 258
Query: 286 LDAPGHKSFVPNMIGGASQ--ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH 343
+D GH ++ I G + D A+L++SA G G TREH LA V
Sbjct: 259 IDLAGHHKYLHTTIFGLTSYCPDCALLLVSANTGI-------AGTTREHLGLALALKVPF 311
Query: 344 LIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQS- 402
IV ++K+D ++ER E++ LK+ G + +T A QS
Sbjct: 312 FIV-VSKID-LCAKTTVERTVRQLERV---LKQPGCHKVPMLVTSEDDAVTAAQQFAQSP 366
Query: 403 DFCPWYT--------------GLPFIPYLDNLPNFNRSIDGPIRLPIVDKYK--DMGTVV 446
+ P +T L +P L N + + + Y ++GTVV
Sbjct: 367 NVTPIFTLSSVSGESLDLLKVFLNILPPLTNSKEQEELMQQLTEFQVDEIYTVPEVGTVV 426
Query: 447 LGKLESGSIFKGQQLVMMPNKHN----VEVLGILSDDTETDFVAPGENLKIRLKGIEEEE 502
G L SG +G QLV+ P + V I + + + G+ + L +
Sbjct: 427 GGTLSSGICREGDQLVVGPTDDGCFLELRVCSIQRNRSACRVLRAGQAATLALGDFDRAL 486
Query: 503 ILPGFILCDPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITALISLVD 562
+ G ++ P F+ +IV++ H + G+ +H+ + + + I D
Sbjct: 487 LRKGMVMVSPEMNPTICSVFEAEIVLLFHATTFRRGFQVTVHVGN-VRQTAVVEKIHAKD 545
Query: 563 K-KSGEKSKTRPRFVKQDQ 580
K ++GEK+ R RF+K +
Sbjct: 546 KLRTGEKAVVRFRFLKHPE 564
>gi|169217153 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 57.0 bits (136), Expect = 5e-08
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 260 QEERDKGKTVEVGRAYFETERKHFTIL 286
+ E + G T+++ FET ++ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|113430525 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 57.0 bits (136), Expect = 5e-08
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 260 QEERDKGKTVEVGRAYFETERKHFTIL 286
+ E + G T+++ FET ++ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|113429979 PREDICTED: similar to EEF1A1 protein [Homo sapiens]
Length = 105
Score = 57.0 bits (136), Expect = 5e-08
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 200 KKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN 259
+K H+++ IGH D+GK T G + VDKRT+E +E++A E + + +W L
Sbjct: 4 EKAHISITVIGHQDSGKPTTNGHL------VDKRTIENFEKDAAEMGKGFFKYAWVLHKL 57
Query: 260 QEERDKGKTVEVGRAYFETERKHFTIL 286
+ E + G T+++ FET ++ +L
Sbjct: 58 KAECECGVTIDISPWKFETSKQWTRLL 84
>gi|157426893 GUF1 GTPase homolog [Homo sapiens]
Length = 669
Score = 54.7 bits (130), Expect = 3e-07
Identities = 80/330 (24%), Positives = 129/330 (39%), Gaps = 58/330 (17%)
Query: 161 PGGGSSGDSGP-PEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTI 219
PG S+ G PE + + E ++ + S P + N + HVD GKST+
Sbjct: 28 PGPRSAPTLGAAPESWATDRLYSSAEFKEKLDM---SRFPVENIRNFSIVAHVDHGKSTL 84
Query: 220 GGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRA--YFE 277
+++ LTG +DK K LD Q ER++G TV+ A ++
Sbjct: 85 ADRLLELTGTIDKTKNNKQ----------------VLDKLQVERERGITVKAQTASLFYN 128
Query: 278 TERKHF--TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAML 335
E K + ++D PGH F + S +LV+ A +G QT + L
Sbjct: 129 CEGKQYLLNLIDTPGHVDFSYEVSRSLSACQGVLLVVDANEG-------IQAQTVANFFL 181
Query: 336 AKTAGVKHLIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTG 395
A A + +I +INK+D N ER E EK+ F D + S G
Sbjct: 182 AFEAQLS-VIPVINKID--LKNADPERVENQIEKV--------FDIPSD-ECIKISAKLG 229
Query: 396 ANIKEQSDFCPWYTGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDM--GTVVLGKLESG 453
N++ ++ +P P+R + D D G + L G
Sbjct: 230 TNVESVLQ-----------AIIERIPPPKVHRKNPLRALVFDSTFDQYRGVIANVALFDG 278
Query: 454 SIFKGQQLVMMPNKHNVEV--LGILSDDTE 481
+ KG ++V + EV +G+L+ + +
Sbjct: 279 VVSKGDKIVSAHTQKTYEVNEVGVLNPNEQ 308
>gi|54607086 eukaryotic elongation factor,
selenocysteine-tRNA-specific [Homo sapiens]
Length = 596
Score = 51.2 bits (121), Expect = 3e-06
Identities = 71/293 (24%), Positives = 113/293 (38%), Gaps = 67/293 (22%)
Query: 198 APKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALD 257
A ++ +VNV +GH+D+GK+ + + T + A D
Sbjct: 2 AGRRVNVNVGVLGHIDSGKTALARAL------------------------STTASTAAFD 37
Query: 258 TNQEERDKGKTVEVGRAYF-------------------ETERK------HFTILDAPGHK 292
+ R++G T+++G + F E E + T++D PGH
Sbjct: 38 KQPQSRERGITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTLVDCPGHA 97
Query: 293 SFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMD 352
S + +IGGA DL +LVI KG +T Q+ E ++ + A K L+V++NK+D
Sbjct: 98 SLIRTIIGGAQIIDLMMLVIDVTKG-MQT------QSAECLVIGQIACQK-LVVVLNKID 149
Query: 353 DPTVNWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCP----WY 408
++ +K+ L+ F I G A E P
Sbjct: 150 LLPEGKRQAAIDKMTKKMQKTLENTKFRGAPIIPVAAKPGGPEAPETEAPQGIPELIELL 209
Query: 409 TGLPFIPYLDNLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQL 461
T IP D F S+D + K GTV+ G + SGSI G +
Sbjct: 210 TSQISIPTRDPSGPFLMSVDHCFSI------KGQGTVMTGTILSGSISLGDSV 256
>gi|4503507 eukaryotic translation initiation factor 2, subunit 3
gamma, 52kDa [Homo sapiens]
Length = 472
Score = 50.8 bits (120), Expect = 4e-06
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 204 VNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEK-------------YEREAKEKNRETW 250
+N+ IGHV GKST+ I + + K LE+ Y+ + R
Sbjct: 42 INIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKLDDPSCPRPEC 101
Query: 251 YLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVL 310
Y S T E + + F+ R H + +D PGH + M+ GA+ D A+L
Sbjct: 102 YRSCGSSTPDE---FPTDIPGTKGNFKLVR-HVSFVDCPGHDILMATMLNGAAVMDAALL 157
Query: 311 VISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYEE 365
+I+ + + QT EH + +KH+++L NK+D + + E+YE+
Sbjct: 158 LIAGNESCPQP------QTSEHLAAIEIMKLKHILILQNKIDLVKESQAKEQYEQ 206
>gi|18390331 G elongation factor, mitochondrial 1 [Homo sapiens]
Length = 751
Score = 49.7 bits (117), Expect = 8e-06
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 10/119 (8%)
Query: 199 PKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDT 258
P ++ N+ H+D+GK+T+ ++++ TG + K E K K+ + +D+
Sbjct: 42 PNEKIRNIGISAHIDSGKTTLTERVLYYTGRIAKM------HEVKGKDG----VGAVMDS 91
Query: 259 NQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKG 317
+ ER +G T++ Y + + I+D PGH F + D AVLV+ A G
Sbjct: 92 MELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGG 150
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 49.3 bits (116), Expect = 1e-05
Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 61/288 (21%)
Query: 182 EKEEIRKSKSVIV-PSGAPK---KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEK 237
+++++RK+K + P P V +GHVD GK+T+ L+K
Sbjct: 155 KQDKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTL---------------LDK 199
Query: 238 YEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETER-KHFTILDAPGHKSFVP 296
+ + A++T G T +G + T LD PGH +F
Sbjct: 200 FRKTQVA----------AVETG------GITQHIGAFLVSLPSGEKITFLDTPGHAAFSA 243
Query: 297 NMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTV 356
GA D+ VLV++A G + QT E AK A V +I+ +NK D
Sbjct: 244 MRARGAQVTDIVVLVVAADDGVMK-------QTVESIQHAKDAQVP-IILAVNKCDKAEA 295
Query: 357 NWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPY 416
+ E+ K++L+ + V D+ +P S LTG N+ ++ L +
Sbjct: 296 D-----PEKVKKELLAY-DVVCEDYGGDVQAVPVSALTGDNLMALAEAT---VALAEMLE 346
Query: 417 LDNLPNFNRSIDGPIRLPIVDKYKD--MGTVVLGKLESGSIFKGQQLV 462
L PN GP+ +++ + D G V ++ G++ KG LV
Sbjct: 347 LKADPN------GPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLV 388
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 49.3 bits (116), Expect = 1e-05
Identities = 71/288 (24%), Positives = 117/288 (40%), Gaps = 61/288 (21%)
Query: 182 EKEEIRKSKSVIV-PSGAPK---KEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEK 237
+++++RK+K + P P V +GHVD GK+T+ L+K
Sbjct: 155 KQDKVRKNKDAVRRPQADPALLTPRSPVVTIMGHVDHGKTTL---------------LDK 199
Query: 238 YEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETER-KHFTILDAPGHKSFVP 296
+ + A++T G T +G + T LD PGH +F
Sbjct: 200 FRKTQVA----------AVETG------GITQHIGAFLVSLPSGEKITFLDTPGHAAFSA 243
Query: 297 NMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTV 356
GA D+ VLV++A G + QT E AK A V +I+ +NK D
Sbjct: 244 MRARGAQVTDIVVLVVAADDGVMK-------QTVESIQHAKDAQVP-IILAVNKCDKAEA 295
Query: 357 NWSIERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPY 416
+ E+ K++L+ + V D+ +P S LTG N+ ++ L +
Sbjct: 296 D-----PEKVKKELLAY-DVVCEDYGGDVQAVPVSALTGDNLMALAEAT---VALAEMLE 346
Query: 417 LDNLPNFNRSIDGPIRLPIVDKYKD--MGTVVLGKLESGSIFKGQQLV 462
L PN GP+ +++ + D G V ++ G++ KG LV
Sbjct: 347 LKADPN------GPVEGTVIESFTDKGRGLVTTAIIQRGTLRKGSVLV 388
>gi|49472835 bridging integrator 2 [Homo sapiens]
Length = 565
Score = 42.4 bits (98), Expect = 0.001
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 6/158 (3%)
Query: 44 LSSAFSRKLNVNAKPFVPNVHAAEFVPSFLRGPTQPPTLPAGSGSNDETCTGAGYPQGKR 103
LSS+ R L ++ P V A V S L PT P TL S S + T P +
Sbjct: 252 LSSSSRRSLVIS-----PPVRTAT-VSSPLTSPTSPSTLSLKSESESVSATEDLAPDAAQ 305
Query: 104 MGRGAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMALEESWEHSKEVSEAEPGG 163
+ ++ EE + EGS ++ + E NG + + E +K E P
Sbjct: 306 GEDNSEIKELLEEEEIEKEGSEASSSEEDEPLPACNGPAQAQPSPTTERAKSQEEVLPSS 365
Query: 164 GSSGDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKK 201
+ G SGQ E + ++++ S PKK
Sbjct: 366 TTPSPGGALSPSGQPSSSATEVVLRTRTASEGSEQPKK 403
>gi|25306287 mitochondrial elongation factor G2 isoform 2 [Homo
sapiens]
Length = 732
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 185 EIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKE 244
+I+ S+I P P + N+ + H+DAGK+T +I++ +G Y R +
Sbjct: 55 DIKSLHSIINP---PIAKIRNIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102
Query: 245 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQ 304
+ D +ER++G T++ F+ + ++D PGH F +
Sbjct: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158
Query: 305 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYE 364
D AV V A G Q +H + I +NKMD ++ E
Sbjct: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASFKY-AVE 209
Query: 365 ECKEKL 370
+EKL
Sbjct: 210 SIREKL 215
>gi|25306283 mitochondrial elongation factor G2 isoform 3 [Homo
sapiens]
Length = 513
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 185 EIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKE 244
+I+ S+I P P + N+ + H+DAGK+T +I++ +G Y R +
Sbjct: 55 DIKSLHSIINP---PIAKIRNIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102
Query: 245 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQ 304
+ D +ER++G T++ F+ + ++D PGH F +
Sbjct: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158
Query: 305 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYE 364
D AV V A G Q +H + I +NKMD ++ E
Sbjct: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASFKY-AVE 209
Query: 365 ECKEKL 370
+EKL
Sbjct: 210 SIREKL 215
>gi|19923640 mitochondrial elongation factor G2 isoform 1 [Homo
sapiens]
Length = 779
Score = 42.0 bits (97), Expect = 0.002
Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 25/186 (13%)
Query: 185 EIRKSKSVIVPSGAPKKEHVNVVFIGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKE 244
+I+ S+I P P + N+ + H+DAGK+T +I++ +G Y R +
Sbjct: 55 DIKSLHSIINP---PIAKIRNIGIMAHIDAGKTTTTERILYYSG---------YTRSLGD 102
Query: 245 KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETERKHFTILDAPGHKSFVPNMIGGASQ 304
+ D +ER++G T++ F+ + ++D PGH F +
Sbjct: 103 VDDG----DTVTDFMAQERERGITIQSAAVTFDWKGYRVNLIDTPGHVDFTLEVERCLRV 158
Query: 305 ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSIERYE 364
D AV V A G Q +H + I +NKMD ++ E
Sbjct: 159 LDGAVAVFDASAGVEAQTLTVWRQADKHNI--------PRICFLNKMDKTGASFKY-AVE 209
Query: 365 ECKEKL 370
+EKL
Sbjct: 210 SIREKL 215
>gi|239756039 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 95 GAGYPQGKRMGRGAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMA------LEE 148
G G QGK G + +E L SNS++T + + +E E + L+
Sbjct: 4177 GVGIEQGKMDGD----KNEQERVLFLYLPSNSSLTHYILDTRIEGEEDQQGIIRPGILQP 4232
Query: 149 SWEHSKEVSEAEPGGGSSGDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVF 208
+ S E + G S GDS + ++ M++KEE + ++ P + +
Sbjct: 4233 RHQKSSETGKKANGVPSEGDSASEVQKAKDYMQQKEEDESKQETVLFLHLPSESSLTCYE 4292
Query: 209 IGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN--------- 259
+ G+ L G++ TL+ ++++ + + S+ +D++
Sbjct: 4293 LNTRKEGEED-------LQGIIKSATLQLRQQKSFDAGKIAHTKSFGVDSSNDVKTVQEY 4345
Query: 260 --QEERDKGKTVEV 271
Q+E D+GKTV V
Sbjct: 4346 KPQKEVDRGKTVSV 4359
>gi|239750569 PREDICTED: hypothetical protein LOC643677 [Homo sapiens]
Length = 6929
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/194 (21%), Positives = 80/194 (41%), Gaps = 28/194 (14%)
Query: 95 GAGYPQGKRMGRGAPVEPSREEPLVSLEGSNSAVTMELSEPVVENGEVEMA------LEE 148
G G QGK G + +E L SNS++T + + +E E + L+
Sbjct: 4177 GVGIEQGKMDGD----KNEQERVLFLYLPSNSSLTHYILDTRIEGEEDQQGIIRPGILQP 4232
Query: 149 SWEHSKEVSEAEPGGGSSGDSGPPEESGQEMMEEKEEIRKSKSVIVPSGAPKKEHVNVVF 208
+ S E + G S GDS + ++ M++KEE + ++ P + +
Sbjct: 4233 RHQKSSETGKKANGVPSEGDSASEVQKAKDYMQQKEEDESKQETVLFLHLPSESSLTCYE 4292
Query: 209 IGHVDAGKSTIGGQIMFLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTN--------- 259
+ G+ L G++ TL+ ++++ + + S+ +D++
Sbjct: 4293 LNTRKEGEED-------LQGIIKSATLQLRQQKSFDAGKIAHTKSFGVDSSNDVKTVQEY 4345
Query: 260 --QEERDKGKTVEV 271
Q+E D+GKTV V
Sbjct: 4346 KPQKEVDRGKTVSV 4359
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,515,931
Number of Sequences: 37866
Number of extensions: 1362396
Number of successful extensions: 4534
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 4236
Number of HSP's gapped (non-prelim): 352
length of query: 628
length of database: 18,247,518
effective HSP length: 108
effective length of query: 520
effective length of database: 14,157,990
effective search space: 7362154800
effective search space used: 7362154800
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.