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Search of human proteins with 46048439
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46048439 N-acetyltransferase 6 [Homo sapiens]
(308 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46048439 N-acetyltransferase 6 [Homo sapiens] 634 0.0
gi|145309324 FH2 domain containing 1 [Homo sapiens] 47 2e-05
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 46 4e-05
gi|56549694 enabled homolog isoform a [Homo sapiens] 45 6e-05
gi|39930375 enabled homolog isoform b [Homo sapiens] 45 6e-05
gi|149999378 inverted formin 2 isoform 2 [Homo sapiens] 45 6e-05
gi|149999380 inverted formin 2 isoform 1 [Homo sapiens] 45 6e-05
gi|52485606 formin-like 2 [Homo sapiens] 45 1e-04
gi|110832843 TBP-associated factor 4 [Homo sapiens] 44 1e-04
gi|157168329 formin 1 [Homo sapiens] 44 2e-04
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ... 44 2e-04
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ... 44 2e-04
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ... 44 2e-04
gi|19923345 RNA binding motif protein 12 [Homo sapiens] 44 2e-04
gi|118572599 formin homology 2 domain containing 1 [Homo sapiens] 44 2e-04
gi|23510462 RNA binding motif protein 12 [Homo sapiens] 44 2e-04
gi|10937869 survival of motor neuron 2, centromeric isoform d [H... 43 3e-04
gi|13259527 survival of motor neuron 2, centromeric isoform a [H... 43 3e-04
gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo... 43 3e-04
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 43 3e-04
gi|148613878 acrosin precursor [Homo sapiens] 43 3e-04
gi|33356148 formin-like 1 [Homo sapiens] 43 3e-04
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 43 4e-04
gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens] 43 4e-04
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 42 5e-04
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho... 42 5e-04
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 42 5e-04
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 42 7e-04
gi|153792074 proline rich 12 [Homo sapiens] 42 9e-04
gi|188536047 SWI/SNF-related matrix-associated actin-dependent r... 41 0.002
>gi|46048439 N-acetyltransferase 6 [Homo sapiens]
Length = 308
Score = 634 bits (1636), Expect = 0.0
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MQELTLSPGPAKLTPTLDPTHRMELILSTSPAELTLDPACQPKLPLDSTCQPEMTFNPGP 60
MQELTLSPGPAKLTPTLDPTHRMELILSTSPAELTLDPACQPKLPLDSTCQPEMTFNPGP
Sbjct: 1 MQELTLSPGPAKLTPTLDPTHRMELILSTSPAELTLDPACQPKLPLDSTCQPEMTFNPGP 60
Query: 61 TELTLDPEHQPEETPAPSLAELTLEPVHRRPELLDACADLINDQWPRSRTSRLHSLGQSS 120
TELTLDPEHQPEETPAPSLAELTLEPVHRRPELLDACADLINDQWPRSRTSRLHSLGQSS
Sbjct: 61 TELTLDPEHQPEETPAPSLAELTLEPVHRRPELLDACADLINDQWPRSRTSRLHSLGQSS 120
Query: 121 DAFPLCLMLLSPHPTLEAAPVVVGHARLSRVLNQPQSLLVETVVVARALRGRGFGRRLME 180
DAFPLCLMLLSPHPTLEAAPVVVGHARLSRVLNQPQSLLVETVVVARALRGRGFGRRLME
Sbjct: 121 DAFPLCLMLLSPHPTLEAAPVVVGHARLSRVLNQPQSLLVETVVVARALRGRGFGRRLME 180
Query: 181 GLEVFARARGFRKLHLTTHDQVHFYTHLGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSP 240
GLEVFARARGFRKLHLTTHDQVHFYTHLGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSP
Sbjct: 181 GLEVFARARGFRKLHLTTHDQVHFYTHLGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSP 240
Query: 241 RPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQNVRGRP 300
RPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQNVRGRP
Sbjct: 241 RPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQNVRGRP 300
Query: 301 IFWMEKDI 308
IFWMEKDI
Sbjct: 301 IFWMEKDI 308
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 47.4 bits (111), Expect = 2e-05
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRG-PKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQY 293
P AP P PP P+ + P PP PPPPPLP I PP P PP+ + +
Sbjct: 31 PPAPPPPPPPPPPSPPCSCSREECPSSPPPPPPPPLPGEPPIPPPPPGLPPTTHMNGYSH 90
Query: 294 --QNVRGRPIFW 303
+ R R FW
Sbjct: 91 LGKKKRMRSFFW 102
Score = 35.4 bits (80), Expect = 0.064
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 249 LTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
+ Q P P PP PPPPP P C PS PP
Sbjct: 25 MIGQTPPPAPPPPP-PPPPPSPPCSCSREECPSSPP 59
Score = 30.0 bits (66), Expect = 2.7
Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 13/47 (27%)
Query: 250 TAQAAPRGPKGPPLPPPPPLP------------ECLTISPPVPSGPP 284
TA G PP PPPPP P EC + SPP P PP
Sbjct: 20 TAPGFMIGQTPPPAPPPPPPPPPPSPPCSCSREECPS-SPPPPPPPP 65
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 46.2 bits (108), Expect = 4e-05
Identities = 25/62 (40%), Positives = 26/62 (41%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSK 286
P L P PS P K PN + P PP PPPPP P PP PS PP
Sbjct: 1963 PPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQV 2022
Query: 287 SL 288
L
Sbjct: 2023 QL 2024
Score = 35.0 bits (79), Expect = 0.084
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 6/54 (11%)
Query: 234 FPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKS 287
FP A + R+ + P P P PPPPP P PP+P PP S
Sbjct: 1928 FPYAALEKFARQYREAYDKLYPISPSSPETPPPPPPP------PPLPPAPPQPS 1975
Score = 34.3 bits (77), Expect = 0.14
Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 6/55 (10%)
Query: 236 TAPSPRPPRKAPNLTAQAAPRGPK------GPPLPPPPPLPECLTISPPVPSGPP 284
T P P PP P Q + GP PL PPP P PP P PP
Sbjct: 1957 TPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPPPPPPPPPPPP 2011
Score = 32.3 bits (72), Expect = 0.54
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 17/71 (23%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSK 286
P + FPT+ + +P L+ +AP P PPPPP PP P PPS
Sbjct: 3086 PGAGMLGFPTSAT-----SSPALSLSSAPTKPLLQTPPPPPP--------PPPP--PPSS 3130
Query: 287 SL--LETQYQN 295
SL +T+ QN
Sbjct: 3131 SLSGQQTEQQN 3141
Score = 30.8 bits (68), Expect = 1.6
Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 13/46 (28%)
Query: 252 QAAPRGPKGPPLPPPPPLPECL-------TIS------PPVPSGPP 284
+ P P PPLPP PP P + T+S PP P PP
Sbjct: 1956 ETPPPPPPPPPLPPAPPQPSSMGPVKIPNTVSTPLQAPPPTPPPPP 2001
Score = 30.0 bits (66), Expect = 2.7
Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 233 AFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQ 292
A P A + P +A Q P+ PK P L PP PVPS P S+ Q
Sbjct: 2383 ALPLASTSSDPPQASTAQPQPQPQPPKQPQLIGRPPSAS----QTPVPSSPLQISMTSLQ 2438
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 45.4 bits (106), Expect = 6e-05
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
PA A P P P PP P+ GP PP PPPPPLP + PP P PP
Sbjct: 323 PAQASVALPPPPGPPPPPPLPST-------GP--PPPPPPPPLPNQVPPPPPPPPAPP 371
Score = 42.0 bits (97), Expect = 7e-04
Identities = 25/50 (50%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P AP P PP P AQA+ P P PPPPPLP T PP P PP
Sbjct: 310 PLAPPPPPP--LPPGPAQASVALPPPPGPPPPPPLPS--TGPPPPPPPPP 355
Score = 32.3 bits (72), Expect = 0.54
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPP-PPLPECLTIS-PPVPSGPPSKSLLET 291
P + P + P+ Q GP PP PPP PP P +++ PP P PP L T
Sbjct: 289 PGLQAASQPAETPS--QQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPST 345
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 45.4 bits (106), Expect = 6e-05
Identities = 25/58 (43%), Positives = 27/58 (46%), Gaps = 9/58 (15%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
PA A P P P PP P+ GP PP PPPPPLP + PP P PP
Sbjct: 323 PAQASVALPPPPGPPPPPPLPST-------GP--PPPPPPPPLPNQVPPPPPPPPAPP 371
Score = 42.0 bits (97), Expect = 7e-04
Identities = 25/50 (50%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P AP P PP P AQA+ P P PPPPPLP T PP P PP
Sbjct: 310 PLAPPPPPP--LPPGPAQASVALPPPPGPPPPPPLPS--TGPPPPPPPPP 355
Score = 32.3 bits (72), Expect = 0.54
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPP-PPLPECLTIS-PPVPSGPPSKSLLET 291
P + P + P+ Q GP PP PPP PP P +++ PP P PP L T
Sbjct: 289 PGLQAASQPAETPS--QQGIVLGPLAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPST 345
>gi|149999378 inverted formin 2 isoform 2 [Homo sapiens]
Length = 1240
Score = 45.4 bits (106), Expect = 6e-05
Identities = 29/66 (43%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 226 LPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPL--------PPPPPLPECLTISP 277
LP+ A PTAP P P P L A A P P PPL PPPPPLP P
Sbjct: 446 LPSVGAKALPTAPPPPP---LPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPP 502
Query: 278 PVPSGP 283
P P P
Sbjct: 503 PPPLLP 508
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLP-----------PPPPLPECLTI 275
P L T P P PP P +A+ P P PPLP PPPPLP +
Sbjct: 411 PRALEQQASTPPPPPPPPLLPGSSAEPPPPPPP-PPLPSVGAKALPTAPPPPPLPGLGAM 469
Query: 276 SPPVPSGPP 284
+PP P PP
Sbjct: 470 APPAPPLPP 478
Score = 41.6 bits (96), Expect = 9e-04
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLP-------PPPPLP-----ECLT 274
P L + P P PP P++ A+A P P PPLP P PPLP C
Sbjct: 427 PPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEF 486
Query: 275 ISPPVPSGP 283
+ PP P P
Sbjct: 487 LPPPPPPLP 495
Score = 35.8 bits (81), Expect = 0.049
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSG 282
P P P P P P GPP PPPP LP T SPPV G
Sbjct: 488 PPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLP--CTCSPPVAGG 533
Score = 31.6 bits (70), Expect = 0.93
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 261 PPLPPPPPLPECLTISPPVPSGPPSKSL 288
PP PPPP LP PP P PP S+
Sbjct: 422 PPPPPPPLLPGSSAEPPPPPPPPPLPSV 449
>gi|149999380 inverted formin 2 isoform 1 [Homo sapiens]
Length = 1249
Score = 45.4 bits (106), Expect = 6e-05
Identities = 29/66 (43%), Positives = 30/66 (45%), Gaps = 11/66 (16%)
Query: 226 LPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPL--------PPPPPLPECLTISP 277
LP+ A PTAP P P P L A A P P PPL PPPPPLP P
Sbjct: 446 LPSVGAKALPTAPPPPP---LPGLGAMAPPAPPLPPPLPGSCEFLPPPPPPLPGLGCPPP 502
Query: 278 PVPSGP 283
P P P
Sbjct: 503 PPPLLP 508
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLP-----------PPPPLPECLTI 275
P L T P P PP P +A+ P P PPLP PPPPLP +
Sbjct: 411 PRALEQQASTPPPPPPPPLLPGSSAEPPPPPPP-PPLPSVGAKALPTAPPPPPLPGLGAM 469
Query: 276 SPPVPSGPP 284
+PP P PP
Sbjct: 470 APPAPPLPP 478
Score = 41.6 bits (96), Expect = 9e-04
Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLP-------PPPPLP-----ECLT 274
P L + P P PP P++ A+A P P PPLP P PPLP C
Sbjct: 427 PPLLPGSSAEPPPPPPPPPLPSVGAKALPTAPPPPPLPGLGAMAPPAPPLPPPLPGSCEF 486
Query: 275 ISPPVPSGP 283
+ PP P P
Sbjct: 487 LPPPPPPLP 495
Score = 35.8 bits (81), Expect = 0.049
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSG 282
P P P P P P GPP PPPP LP T SPPV G
Sbjct: 488 PPPPPPLPGLGCPPPPPPLLPGMGWGPPPPPPPLLP--CTCSPPVAGG 533
Score = 31.6 bits (70), Expect = 0.93
Identities = 14/28 (50%), Positives = 15/28 (53%)
Query: 261 PPLPPPPPLPECLTISPPVPSGPPSKSL 288
PP PPPP LP PP P PP S+
Sbjct: 422 PPPPPPPLLPGSSAEPPPPPPPPPLPSV 449
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 44.7 bits (104), Expect = 1e-04
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 238 PSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P P PP + T + GP PP+PPPPP P PP P PP
Sbjct: 527 PPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPP 573
Score = 43.5 bits (101), Expect = 2e-04
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 15/65 (23%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLP-------ECLTISPPV 279
P T+ N T P P PP P P PP PPPPPLP ++PP+
Sbjct: 540 PETVQNGPVTPPMPPPP--------PPPPPPPPPPPPPPPPPLPGPAAETVPAPPLAPPL 591
Query: 280 PSGPP 284
PS PP
Sbjct: 592 PSAPP 596
Score = 43.1 bits (100), Expect = 3e-04
Identities = 25/67 (37%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQ 294
P P P PP T Q P P PP PPPPP P PP P PP L +
Sbjct: 527 PPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPP------PPPPPPPPPPPLPGPAAE 580
Query: 295 NVRGRPI 301
V P+
Sbjct: 581 TVPAPPL 587
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/45 (46%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPV 279
P P P PP P A+ P P PPLP PPLP T SP V
Sbjct: 563 PPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPG--TSSPTV 605
Score = 33.1 bits (74), Expect = 0.32
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Query: 251 AQAAPRGPKGPPLPPPPPLPECL---TISPPVPSGPP 284
A + P P PPLPP PE + ++PP+P PP
Sbjct: 521 ASSGPLPPPPPPLPPSSDTPETVQNGPVTPPMPPPPP 557
Score = 30.0 bits (66), Expect = 2.7
Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Query: 231 LNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
+ A + P P PP P + P + P+ PP P P PP P PP
Sbjct: 518 MGAASSGPLPPPPPPLP--PSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPP 569
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 44.3 bits (103), Expect = 1e-04
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 227 PATLLNAFPTAPSPRPPRKA-PNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPS 285
P T++ P + PP A P+ A AP P P PPPPP P L P P+GPP+
Sbjct: 234 PGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP-PPPPPAPATLARPPGHPAGPPT 292
Score = 33.9 bits (76), Expect = 0.19
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
Query: 211 QLGEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLP 270
+L P +G + +PA A P+P P K A AA GP P P P P P
Sbjct: 125 KLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP 184
Query: 271 ECLTISPPVPSGPPSKSLL 289
P P+GP + L
Sbjct: 185 -----GPGKPAGPGAAQTL 198
Score = 32.7 bits (73), Expect = 0.42
Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGP 283
PA A P AP+ P AP R G P P PP P P VP+GP
Sbjct: 67 PAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPR----RPLVPAGP 119
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 43.5 bits (101), Expect = 2e-04
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 218 GLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISP 277
GL S P ++A P P P PP + A P PP PPPPPLP + +P
Sbjct: 661 GLGSLSPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGP-----PPPPPPPPLPN--SPAP 713
Query: 278 PVPSGPP 284
P P GPP
Sbjct: 714 PNPGGPP 720
Score = 41.2 bits (95), Expect = 0.001
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSG 282
P++ P PP P L AP P GPP PPPP ++PP P G
Sbjct: 693 PSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPP-----GLAPPPPPG 735
Score = 40.0 bits (92), Expect = 0.003
Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 17/81 (20%)
Query: 214 EPVQGLVFTSRRLPATLLNAFPTAP-SPRPPRKAPNLTAQAAPRGPK-----GPPLPPP- 266
+P++G+ ++ A P P S PP P+ +P P GPPLPPP
Sbjct: 632 QPMEGMASNQQK-------ALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPPP 684
Query: 267 ---PPLPECLTISPPVPSGPP 284
PPLP + PP P PP
Sbjct: 685 PPPPPLPPPSSAGPPPPPPPP 705
>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
sapiens]
Length = 218
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 227 PATLLNAFPTAPSPRPPR--KAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P L + P P +PPR K P PR P PP PP PPLP PP P PP
Sbjct: 18 PCGLWSPPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLP------PPRPPKPP 71
Query: 285 S 285
S
Sbjct: 72 S 72
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 235 PTAPSPRPPRKA-PNLTAQAAPRGPKGPPLPPPPPLP 270
P P P PP P L P+ P PP PP PP P
Sbjct: 37 PKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSP 73
>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
sapiens]
Length = 218
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 227 PATLLNAFPTAPSPRPPR--KAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P L + P P +PPR K P PR P PP PP PPLP PP P PP
Sbjct: 18 PCGLWSPPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLP------PPRPPKPP 71
Query: 285 S 285
S
Sbjct: 72 S 72
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 235 PTAPSPRPPRKA-PNLTAQAAPRGPKGPPLPPPPPLP 270
P P P PP P L P+ P PP PP PP P
Sbjct: 37 PKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSP 73
>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
sapiens]
Length = 218
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/61 (42%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 227 PATLLNAFPTAPSPRPPR--KAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P L + P P +PPR K P PR P PP PP PPLP PP P PP
Sbjct: 18 PCGLWSPPPPLPPRKPPRPPKPPRPLPPNPPRPPLPPPRPPKPPLP------PPRPPKPP 71
Query: 285 S 285
S
Sbjct: 72 S 72
Score = 33.1 bits (74), Expect = 0.32
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Query: 235 PTAPSPRPPRKA-PNLTAQAAPRGPKGPPLPPPPPLP 270
P P P PP P L P+ P PP PP PP P
Sbjct: 37 PKPPRPLPPNPPRPPLPPPRPPKPPLPPPRPPKPPSP 73
>gi|19923345 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 43.5 bits (101), Expect = 2e-04
Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 207 HLGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPP 266
++G G P S P + P P P P P + P P P LPP
Sbjct: 161 NMGASFGSPTFSSTVPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPV 220
Query: 267 PPLPECLTISPPVPSGPPSKSL 288
PP+P PPVPS PP L
Sbjct: 221 PPVPPI----PPVPSVPPMTPL 238
Score = 30.0 bits (66), Expect = 2.7
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 227 PATLLNAFPTAPSPRP-PRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P + + P PS P P P T P P PP+P PP+ +S P PP
Sbjct: 192 PIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
>gi|118572599 formin homology 2 domain containing 1 [Homo sapiens]
Length = 1164
Score = 43.5 bits (101), Expect = 2e-04
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 16/74 (21%)
Query: 238 PSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPL------PECLTISPPVPSGPPSKSLLET 291
P+P PP P L+ P PPLPPPPP+ P L ++ P+P P S L T
Sbjct: 570 PAPSPP--LPLLSGVPPP-----PPLPPPPPIKGPFPPPPPLPLAAPLPHSVPDSSALPT 622
Query: 292 QYQNVRGRPIFWME 305
+ + V+ +FW E
Sbjct: 623 KRKTVK---LFWRE 633
>gi|23510462 RNA binding motif protein 12 [Homo sapiens]
Length = 932
Score = 43.5 bits (101), Expect = 2e-04
Identities = 27/82 (32%), Positives = 32/82 (39%), Gaps = 4/82 (4%)
Query: 207 HLGYQLGEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPP 266
++G G P S P + P P P P P + P P P LPP
Sbjct: 161 NMGASFGSPTFSSTVPSTASPMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTLPPV 220
Query: 267 PPLPECLTISPPVPSGPPSKSL 288
PP+P PPVPS PP L
Sbjct: 221 PPVPPI----PPVPSVPPMTPL 238
Score = 30.0 bits (66), Expect = 2.7
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 227 PATLLNAFPTAPSPRP-PRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P + + P PS P P P T P P PP+P PP+ +S P PP
Sbjct: 192 PIPAMPSLPPMPSIPPIPVPPPVPTLPPVPPVPPIPPVPSVPPMTPLPPMSGMPPLNPP 250
>gi|10937869 survival of motor neuron 2, centromeric isoform d [Homo
sapiens]
Length = 294
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 240 PRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTI-SPPVPSGPP 284
P PP P L GPP PPPPP P L+ PP PSGPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPP 241
Score = 36.6 bits (83), Expect = 0.029
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 238 PSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPEC 272
P P PP P+L + P P GPP+ PPPP P C
Sbjct: 217 PPPPPPPPPPHLLSCWLPPFPSGPPIIPPPP-PIC 250
>gi|13259527 survival of motor neuron 2, centromeric isoform a [Homo
sapiens]
Length = 282
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 240 PRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTI-SPPVPSGPP 284
P PP P L GPP PPPPP P L+ PP PSGPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPP 241
Score = 36.6 bits (83), Expect = 0.029
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 238 PSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPEC 272
P P PP P+L + P P GPP+ PPPP P C
Sbjct: 217 PPPPPPPPPPHLLSCWLPPFPSGPPIIPPPP-PIC 250
>gi|4507091 survival of motor neuron 1, telomeric isoform d [Homo
sapiens]
Length = 294
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 240 PRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTI-SPPVPSGPP 284
P PP P L GPP PPPPP P L+ PP PSGPP
Sbjct: 196 PPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPP 241
Score = 36.6 bits (83), Expect = 0.029
Identities = 17/35 (48%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 238 PSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPEC 272
P P PP P+L + P P GPP+ PPPP P C
Sbjct: 217 PPPPPPPPPPHLLSCWLPPFPSGPPIIPPPP-PIC 250
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 43.1 bits (100), Expect = 3e-04
Identities = 22/46 (47%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 242 PPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKS 287
PPR P A PR P PP PPPPP P L PP P PS +
Sbjct: 265 PPRPLPPRPPAAQPRPPPSPP-PPPPPPPSPLPPPPPPPPPTPSST 309
Score = 42.0 bits (97), Expect = 7e-04
Identities = 27/65 (41%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
Query: 223 SRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSG 282
S L A L F P P PPR P P P PP PPP PLP PP P
Sbjct: 251 SHPLSAHLPWYFQPPPRPLPPR--PPAAQPRPPPSPPPPPPPPPSPLP------PPPPPP 302
Query: 283 PPSKS 287
PP+ S
Sbjct: 303 PPTPS 307
Score = 35.4 bits (80), Expect = 0.064
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQ 294
P A PRPP P P P P PPPPP P + + +P G L+ +
Sbjct: 273 PPAAQPRPPPSPP-----PPPPPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIE 327
Query: 295 NVRGR 299
++G+
Sbjct: 328 VLKGK 332
Score = 34.3 bits (77), Expect = 0.14
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 224 RRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISP 277
R LP A P P PP P P P PP PPPPP P T P
Sbjct: 267 RPLPPRPPAAQPRPPPSPPPPPPP-------PPSPLPPPPPPPPPTPSSTTKLP 313
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 7/61 (11%)
Query: 232 NAFPTAPSPRPPRKAPNLTAQAAPR-----GPKGPPLPPPPPL--PECLTISPPVPSGPP 284
+A P P+ RPP P + + P PLPP PP P PP P PP
Sbjct: 233 SATPPPPTTRPPPIRPPFSHPLSAHLPWYFQPPPRPLPPRPPAAQPRPPPSPPPPPPPPP 292
Query: 285 S 285
S
Sbjct: 293 S 293
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 43.1 bits (100), Expect = 3e-04
Identities = 21/46 (45%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Query: 242 PPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKS 287
PPR P A PR P PP PPPPP + PP P PP+ S
Sbjct: 331 PPRPLPPRPPAAQPRPPPSPPPPPPPP---ASPLPPPPPPPPPTPS 373
Score = 35.4 bits (80), Expect = 0.064
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSLLETQYQ 294
P A PRPP P P P P PPPPP P + + +P G L+ +
Sbjct: 339 PPAAQPRPPPSPP-----PPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLIE 393
Query: 295 NVRGR 299
++G+
Sbjct: 394 VLKGK 398
Score = 34.7 bits (78), Expect = 0.11
Identities = 21/54 (38%), Positives = 21/54 (38%), Gaps = 7/54 (12%)
Query: 224 RRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISP 277
R LP A P P PP P P P PP PPPPP P T P
Sbjct: 333 RPLPPRPPAAQPRPPPSPPPPPPP-------PASPLPPPPPPPPPTPSSTTKLP 379
>gi|33356148 formin-like 1 [Homo sapiens]
Length = 1100
Score = 43.1 bits (100), Expect = 3e-04
Identities = 26/76 (34%), Positives = 29/76 (38%)
Query: 209 GYQLGEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPP 268
G G P L + P P P P++AP AP P P PP PP
Sbjct: 520 GVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPP 579
Query: 269 LPECLTISPPVPSGPP 284
LP L PP P PP
Sbjct: 580 LPGDLPPPPPPPPPPP 595
Score = 43.1 bits (100), Expect = 3e-04
Identities = 29/77 (37%), Positives = 32/77 (41%), Gaps = 14/77 (18%)
Query: 215 PVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPP-------LPPPP 267
P+ GL P+ A P SP PP AP L P P PP +PPPP
Sbjct: 547 PLPGLPSPQEAPPSAPPQAPPLPGSPEPP-PAPPLPGDLPPPPPPPPPPPGTDGPVPPPP 605
Query: 268 PLPECLTISPPVPSGPP 284
P P PP P GPP
Sbjct: 606 PPP------PPPPGGPP 616
Score = 35.4 bits (80), Expect = 0.064
Identities = 18/48 (37%), Positives = 22/48 (45%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
AP+P P +P+ A G PPPPPLP + PS PP
Sbjct: 516 APTPGVPTGSPSPDLAPAAEPAPGAAPPPPPPLPGLPSPQEAPPSAPP 563
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 42.7 bits (99), Expect = 4e-04
Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 16/92 (17%)
Query: 209 GYQLGEP--VQGLVFTSRRLPATLLNAFPTAPSPR---------PPRKAPNLTAQAAPRG 257
G QL P V G S LP L P P+PR PP P T ++ P
Sbjct: 323 GNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRGGPPPPPPPATGRSGPLP 382
Query: 258 PK-----GPPLPPPPPLPECLTISPPVPSGPP 284
P GPP+PPPPP P S P+ PP
Sbjct: 383 PPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
Score = 33.1 bits (74), Expect = 0.32
Identities = 19/50 (38%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P P P P R L G KG P PP+P + PP P GPP
Sbjct: 312 PLPPPPPPSRGGNQLPRPPIVGGNKGRS-GPLPPVPLGIAPPPPTPRGPP 360
>gi|169658367 BAH domain and coiled-coil containing 1 [Homo sapiens]
Length = 2608
Score = 42.7 bits (99), Expect = 4e-04
Identities = 28/77 (36%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 212 LGEPVQGLVFTSRRLPATLLNAFPTAPSPRP-PRKAPNLTAQAAPRGPKGPPLPPPPPLP 270
L EP Q S P L P APSP P K P P+ P P PPP P
Sbjct: 955 LEEPAQEKAPKSTHKPVALTPTAPGAPSPAAGPTKLPPCCHPPDPKPPASSPTPPPRPSA 1014
Query: 271 EC-LTISPPVPSGPPSK 286
C L + P GP S+
Sbjct: 1015 PCTLNVCPASSPGPGSR 1031
Score = 28.9 bits (63), Expect = 6.0
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 5/44 (11%)
Query: 242 PPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPS 285
PPR P L A A G PP P+ PP SGPPS
Sbjct: 1253 PPRALPGLDALVAATINLGDLPSDSPPDPQ-----PPAASGPPS 1291
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 42.4 bits (98), Expect = 5e-04
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 238 PSPRPPRKAPNL--TAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P P P+ P + + P GP GPP PP P P TIS P P GPP
Sbjct: 1379 PGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPP 1427
Score = 35.4 bits (80), Expect = 0.064
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLP 270
AP P R L P GP GPP PP PP P
Sbjct: 987 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP 1020
Score = 29.6 bits (65), Expect = 3.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 232 NAFPTAPSPRP---PRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKS 287
N +P P P P +A ++ A + PR P+ P P P + + P P+ PP+ S
Sbjct: 1513 NPYPRREHPHPTARPWRADDILA-SPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHS 1570
Score = 28.5 bits (62), Expect = 7.9
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSL 288
AP + + AP G G P P PP PP P GPP L
Sbjct: 978 APGHKGSKGAPGPAGARGESGLAGAPGPAGPP-------GPPGPPGPPGPGL 1022
Score = 28.5 bits (62), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPP 268
P P P P+ + P GP GPP PP PP
Sbjct: 1401 PPGPPGPPSFPGPHRQTISVP-GPPGPPGPPGPP 1433
>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
sapiens]
Length = 1336
Score = 42.4 bits (98), Expect = 5e-04
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 238 PSPRPPRKAPNL--TAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P P P+ P + + P GP GPP PP P P TIS P P GPP
Sbjct: 964 PGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPP 1012
Score = 35.4 bits (80), Expect = 0.064
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLP 270
AP P R L P GP GPP PP PP P
Sbjct: 572 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP 605
Score = 29.6 bits (65), Expect = 3.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 232 NAFPTAPSPRP---PRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKS 287
N +P P P P +A ++ A + PR P+ P P P + + P P+ PP+ S
Sbjct: 1098 NPYPRREHPHPTARPWRADDILA-SPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHS 1155
Score = 28.5 bits (62), Expect = 7.9
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSL 288
AP + + AP G G P P PP PP P GPP L
Sbjct: 563 APGHKGSKGAPGPAGARGESGLAGAPGPAGPP-------GPPGPPGPPGPGL 607
Score = 28.5 bits (62), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPP 268
P P P P+ + P GP GPP PP PP
Sbjct: 986 PPGPPGPPSFPGPHRQTISVP-GPPGPPGPPGPP 1018
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 42.4 bits (98), Expect = 5e-04
Identities = 22/49 (44%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 238 PSPRPPRKAPNL--TAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P P P+ P + + P GP GPP PP P P TIS P P GPP
Sbjct: 1144 PGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGPPGPP 1192
Score = 35.4 bits (80), Expect = 0.064
Identities = 16/34 (47%), Positives = 16/34 (47%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLP 270
AP P R L P GP GPP PP PP P
Sbjct: 752 APGPAGARGESGLAGAPGPAGPPGPPGPPGPPGP 785
Score = 29.6 bits (65), Expect = 3.5
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 232 NAFPTAPSPRP---PRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKS 287
N +P P P P +A ++ A + PR P+ P P P + + P P+ PP+ S
Sbjct: 1278 NPYPRREHPHPTARPWRADDILA-SPPRLPEPQPYPGAPHHSSYVHLRPARPTSPPAHS 1335
Score = 28.5 bits (62), Expect = 7.9
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 7/52 (13%)
Query: 237 APSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSL 288
AP + + AP G G P P PP PP P GPP L
Sbjct: 743 APGHKGSKGAPGPAGARGESGLAGAPGPAGPP-------GPPGPPGPPGPGL 787
Score = 28.5 bits (62), Expect = 7.9
Identities = 14/34 (41%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPP 268
P P P P+ + P GP GPP PP PP
Sbjct: 1166 PPGPPGPPSFPGPHRQTISVP-GPPGPPGPPGPP 1198
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 42.0 bits (97), Expect = 7e-04
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSK 286
P P PP T P GP GPP PP PP P + PP +GPP++
Sbjct: 220 PAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPG--QVLPPPLAGPPNR 269
Score = 38.9 bits (89), Expect = 0.006
Identities = 29/82 (35%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 209 GYQLGEPVQGLVFTSRRLPATLLNAFPTAP------SPRPPRKAPNLTAQAAPRGPKGPP 262
G L P+ G R P +L FP P P PP P + P GP P
Sbjct: 256 GQVLPPPLAGPPNRGDRPPPPVL--FPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQ 313
Query: 263 LPPPPPLPECLTISPPVPSGPP 284
PPPP P PP P GPP
Sbjct: 314 QGPPPP-PGPFPPRPPGPLGPP 334
Score = 36.2 bits (82), Expect = 0.038
Identities = 25/71 (35%), Positives = 27/71 (38%), Gaps = 5/71 (7%)
Query: 235 PTAPSPRPPRK----APNLTAQAAPRGPKGPP-LPPPPPLPECLTISPPVPSGPPSKSLL 289
P P P PPR P LT P P PP PPP P PP SG P+
Sbjct: 317 PPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSR 376
Query: 290 ETQYQNVRGRP 300
+ GRP
Sbjct: 377 GPPPTDPYGRP 387
Score = 34.3 bits (77), Expect = 0.14
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 241 RPPRKAPNLTAQAAPRGPKGPPLPPP----PPLPECLTISPPVPSGPP 284
R P P P GP GPP P P PP P PP P GPP
Sbjct: 206 RFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPP 253
Score = 33.5 bits (75), Expect = 0.24
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Query: 238 PSPRPPRKAPNLTA---QAAPRGPKGPP--LPPPPPLPECLTISPPVPSGPPS 285
P P PP++ P P GP GPP L PPP LP PP + PP+
Sbjct: 307 PGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLP-----GPPPGAPPPA 354
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 41.6 bits (96), Expect = 9e-04
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPP 284
P P P+P +P P P PPLPPPPP P +PS PP
Sbjct: 1473 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPP--------PAMPSPPP 1514
Score = 39.3 bits (90), Expect = 0.004
Identities = 26/65 (40%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Query: 226 LPATLLNAFPTAP---SPRPPRKAPNLTAQAAPRGPKGPP---LPPPPPLPECLTISPPV 279
LP+ N P P PP P T Q P P PP LP PPPL SPP
Sbjct: 1439 LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPP 1498
Query: 280 PSGPP 284
P PP
Sbjct: 1499 PPLPP 1503
Score = 38.1 bits (87), Expect = 0.010
Identities = 26/66 (39%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 231 LNAFPTAPS---PRPP--RKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISP---PVPSG 282
L P+A S P PP + P T AP PP PPPPP P + P P PS
Sbjct: 1436 LPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSS 1495
Query: 283 PPSKSL 288
PP L
Sbjct: 1496 PPPPPL 1501
Score = 37.4 bits (85), Expect = 0.017
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSK 286
PA P P P P P+ AP PP P PPP P + PP P PP+
Sbjct: 1463 PAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPP--PPAA 1520
Query: 287 SLL 289
+ L
Sbjct: 1521 APL 1523
Score = 37.0 bits (84), Expect = 0.022
Identities = 20/55 (36%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 238 PSPRPPRKAPNLTAQAAPRGP----KGPPLPPPPPLPECLTISPPVPSGPPSKSL 288
P P P P+ + P P K PP PPP P P+ PP P PP +L
Sbjct: 1431 PGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQ---PQPPPPPPPPQPAL 1482
Score = 35.4 bits (80), Expect = 0.064
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPP----LPPPPPLPECLTISPPVPSGPPSKSLLE 290
P PSP PP AP ++ P P PP PPPPP P ++ P P P + S +
Sbjct: 1480 PALPSP-PPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAP-PEEPAAPSPED 1537
Query: 291 TQYQNVR 297
+ + R
Sbjct: 1538 PELPDTR 1544
Score = 33.5 bits (75), Expect = 0.24
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 7/50 (14%)
Query: 227 PATLLNAFPTAPSPRPPRKAPNL------TAQAAPRGPKGPPLPPPPPLP 270
P L + APSP P + T AP+ P PP PPPPP+P
Sbjct: 799 PQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPP-PPPPPMP 847
Score = 32.7 bits (73), Expect = 0.42
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Query: 226 LPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLP 270
LP+ L +A +PSP + +L A G PP PPPPP P
Sbjct: 802 LPSVLSHA--PSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPP 844
Score = 30.0 bits (66), Expect = 2.7
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
Query: 226 LPATLLNAFPTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPE 271
LP A P+ P P PP AP AAP P P P LP+
Sbjct: 1501 LPPPPPPAMPSPPPPPPPAAAP----LAAPPEEPAAPSPEDPELPD 1542
Score = 29.6 bits (65), Expect = 3.5
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 18/56 (32%)
Query: 243 PRKAPNLTA----------QAAPRGPKGPPLPPPPPLPECLTISPPVPSGPPSKSL 288
P K P L + Q+ P PP PPPPP PP P+ P L
Sbjct: 1012 PNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPP--------PPAPASEPKGGL 1059
Score = 29.6 bits (65), Expect = 3.5
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 235 PTAPSPRPPRKAPNLTAQAAPRGPKGPPLPPPPPLPECLTISPPV 279
P AP+P P + P T P P PP PE ++ PV
Sbjct: 1694 PKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPV 1738
Score = 28.5 bits (62), Expect = 7.9
Identities = 15/45 (33%), Positives = 19/45 (42%)
Query: 34 LTLDPACQPKLPLDSTCQPEMTFNPGPTELTLDPEHQPEETPAPS 78
L LDP P+LP +P GP + P P PAP+
Sbjct: 1008 LGLDPNKPPELPSTVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPA 1052
>gi|188536047 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c1 [Homo sapiens]
Length = 1105
Score = 40.8 bits (94), Expect = 0.002
Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 213 GEPVQGLVFTSRRLPATLLNAFPTAPSPRPPRKAP---NLTAQAAP-RGPKG----PPLP 264
G + G R +P N P+ P PP P N+ P P G PP
Sbjct: 1021 GSMMPGQHMPGRMIPTVAANIHPSGSGPTPPGMPPMPGNILGPRVPLTAPNGMYPPPPQQ 1080
Query: 265 PPPPLPECLTISPPVPSGPPSKS 287
PPP P + PP GPP+ +
Sbjct: 1081 QPPPPPPADGVPPPPAPGPPASA 1103
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,425,235
Number of Sequences: 37866
Number of extensions: 1093466
Number of successful extensions: 22404
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 704
Number of HSP's that attempted gapping in prelim test: 10142
Number of HSP's gapped (non-prelim): 8492
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.