SMN2 3102

Name: SMN2	Sequence: fasta or formatted (282aa)		NCBI GI: 13259527
Description: survival of motor neuron 2, centromeric isoform a		Referenced in: Capping and Splicing
Other entries for this name: alt prot [294aa] survival of motor neuron 2, centromeric isoform d alt prot [262aa] survival of motor neuron 2, centromeric isoform b alt prot [250aa] survival of motor neuron 2, centromeric isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.4 18 2 C cysteine 2.5 7 1 D aspartate 6.4 18 2 E glutamate 5.3 15 2 F phenylalanine 2.1 6 1 G glycine 8.2 23 3 H histidine 1.1 3 1 I isoleucine 5.0 14 2 K lysine 7.4 21 2 L leucine 6.0 17 2 M methionine 2.5 7 1 N asparagine 5.3 15 2 P proline 13.8 39 10 Q glutamine 3.2 9 2 R arginine 2.5 7 2 S serine 10.3 29 2 T threonine 3.9 11 2 V valine 3.2 9 3 W tryptophan 2.1 6 1 Y tyrosine 2.8 8 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 survival of motor neuron 2, centromeric isoform a [H... SMN2 0.988 survival of motor neuron 2, centromeric isoform d [H... SMN1 0.988 survival of motor neuron 1, telomeric isoform d [Homo... SMN2 0.834 survival of motor neuron 2, centromeric isoform c [H... SMN2 0.821 survival of motor neuron 2, centromeric isoform b [H... SMN1 0.821 survival of motor neuron 1, telomeric isoform b [Hom... FMN1 0.068 formin 1 FMNL1 0.064 formin-like 1 DIAPH1 0.062 diaphanous 1 isoform 2 DIAPH1 0.062 diaphanous 1 isoform 1 SETD1B 0.061 SET domain containing 1B ZC3H4 0.061 zinc finger CCCH-type containing 4 SMNDC1 0.061 survival motor neuron domain containing 1 FMN2 0.061 formin 2 ENAH 0.059 enabled homolog isoform a ENAH 0.059 enabled homolog isoform b DIAPH3 0.057 diaphanous homolog 3 isoform b DIAPH3 0.057 diaphanous homolog 3 isoform a INF2 0.055 inverted formin 2 isoform 2 INF2 0.055 inverted formin 2 isoform 1 WASL 0.055 Wiskott-Aldrich syndrome gene-like protein SETD1A 0.055 SET domain containing 1A LOC645529 0.055 PREDICTED: similar to Putative acrosin-like proteas... CCNK 0.052 cyclin K isoform 1 CPSF6 0.052 cleavage and polyadenylation specific factor 6, 68 ... WASF2 0.052 WAS protein family, member 2 ZFHX4 0.052 zinc finger homeodomain 4 PRR12 0.050 proline rich 12 DIAPH2 0.050 diaphanous 2 isoform 12C DIAPH2 0.050 diaphanous 2 isoform 156 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.