Guide to the Human Genome
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Name: LDHD Sequence: fasta or formatted (507aa) NCBI GI: 37595754
Description:

D-lactate dehydrogenase isoform 1 precursor

Referenced in:

Glycolysis
Mitochondria
TCA Cycle

Other entries for this name:
alt prot [484aa] D-lactate dehydrogenase isoform 2 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         53           2
 C cysteine            3.0         15           1
 D aspartate           3.9         20           2
 E glutamate           6.7         34           2
 F phenylalanine       3.2         16           1
 G glycine             9.9         50           2
 H histidine           3.4         17           2
 I isoleucine          2.6         13           2
 K lysine              2.6         13           1
 L leucine            10.3         52           2
 M methionine          1.8          9           2
 N asparagine          3.2         16           1
 P proline             4.7         24           2
 Q glutamine           4.1         21           2
 R arginine            6.7         34           2
 S serine              4.9         25           1
 T threonine           5.7         29           2
 V valine              9.7         49           3
 W tryptophan          1.8          9           1
 Y tyrosine            1.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   D-lactate dehydrogenase isoform 1 precursor 
LDHD                  0.933   D-lactate dehydrogenase isoform 2 precursor 
D2HGDH                0.128   D-2-hydroxyglutarate dehydrogenase precursor 
AGPS                  0.065   alkyldihydroxyacetone phosphate synthase precursor [H...
KLHDC8B               0.009   kelch domain containing 8B 
DNAI2                 0.006   dynein, axonemal, intermediate polypeptide 2 
DHCR24                0.005   24-dehydrocholesterol reductase precursor 
KCNB1                 0.005   potassium voltage-gated channel, Shab-related subfami...
MLL2                  0.004   myeloid/lymphoid or mixed-lineage leukemia 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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