Search of human proteins with 45592961

Search of human proteins with 45592961

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]
         (249 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]        479   e-136
gi|7706119 palate, lung and nasal epithelium associated precurso...    70   1e-12
gi|18765705 palate, lung and nasal epithelium associated precurs...    70   1e-12
gi|40807482 LPLUNC1 protein precursor [Homo sapiens]                   58   9e-09
gi|109627654 short long palate, lung and nasal epithelium carcin...    45   5e-05
gi|109627656 short long palate, lung and nasal epithelium carcin...    43   2e-04
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    33   0.23 
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    33   0.23 
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    33   0.23 
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    33   0.23 
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    33   0.23 
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ...    33   0.23 
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     30   2.6  
gi|215599585 integrator complex subunit 12 [Homo sapiens]              29   4.4  
gi|21361851 integrator complex subunit 12 [Homo sapiens]               29   4.4  
gi|167900484 pentraxin 3 [Homo sapiens]                                28   5.7  
gi|157739942 gemin 5 [Homo sapiens]                                    28   5.7  
gi|21071016 epidermal growth factor receptor pathway substrate 8...    28   5.7  
gi|21071018 epidermal growth factor receptor pathway substrate 8...    28   5.7  
gi|21071014 epidermal growth factor receptor pathway substrate 8...    28   5.7  
gi|54112390 calcium channel, voltage-dependent, alpha 2/delta su...    28   7.5  
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof...    28   7.5  
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof...    28   7.5  
gi|21735584 oxysterol-binding protein-like protein 3 isoform d [...    28   7.5  
gi|21735582 oxysterol-binding protein-like protein 3 isoform c [...    28   7.5  
gi|21735580 oxysterol-binding protein-like protein 3 isoform b [...    28   7.5  
gi|14149704 oxysterol-binding protein-like protein 3 isoform a [...    28   7.5  
gi|54112429 dedicator of cytokinesis 7 [Homo sapiens]                  28   9.7  
gi|98961156 tetratricopeptide repeat domain 23 [Homo sapiens]          28   9.7  
gi|98961154 tetratricopeptide repeat domain 23 [Homo sapiens]          28   9.7  

>gi|45592961 chromosome 20 open reading frame 70 [Homo sapiens]
          Length = 249

 Score =  479 bits (1233), Expect = e-136
 Identities = 249/249 (100%), Positives = 249/249 (100%)

Query: 1   MLQLWKLVLLCGVLTGTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDNTLKGILEKLKV 60
           MLQLWKLVLLCGVLTGTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDNTLKGILEKLKV
Sbjct: 1   MLQLWKLVLLCGVLTGTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDNTLKGILEKLKV 60

Query: 61  DLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDG 120
           DLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDG
Sbjct: 61  DLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDG 120

Query: 121 KGLNLSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTS 180
           KGLNLSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTS
Sbjct: 121 KGLNLSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTS 180

Query: 181 ISLSLLDKHSQIINKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVVDNPQ 240
           ISLSLLDKHSQIINKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVVDNPQ
Sbjct: 181 ISLSLLDKHSQIINKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVVDNPQ 240

Query: 241 HKTQLQTLI 249
           HKTQLQTLI
Sbjct: 241 HKTQLQTLI 249


>gi|7706119 palate, lung and nasal epithelium associated precursor
           [Homo sapiens]
          Length = 256

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 6/188 (3%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKL---LPTNTDIFGLKISNSLILDVKAEPID 118
           LG+L+      + K     +  LL  ++ K+   +P   +I  +K+++  +L++      
Sbjct: 65  LGILENLPLLDILKPGGGTSGGLLGGLLGKVTSVIPGLNNIIDIKVTDPQLLELGLVQSP 124

Query: 119 DGKGLNLSFPVTANVTVAGPIIG-QIINLKASLDLLTAVTIETDPQTHQPVAVLGECASD 177
           DG  L ++ P+   + V  P++G  ++ L   LD+   +    D Q    + VLG+C   
Sbjct: 125 DGHRLYVTIPLGIKLQVNTPLVGASLLRLAVKLDITAEILAVRDKQERIHL-VLGDCTHS 183

Query: 178 PTSISLSLLDKHSQI-INKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVV 236
           P S+ +SLLD    + I   ++S+   L   +  L+Q  +CPL+   +  LD+ ++  +V
Sbjct: 184 PGSLQISLLDGLGPLPIQGLLDSLTGILNKVLPELVQGNVCPLVNEVLRGLDITLVHDIV 243

Query: 237 DNPQHKTQ 244
           +   H  Q
Sbjct: 244 NMLIHGLQ 251


>gi|18765705 palate, lung and nasal epithelium associated precursor
           [Homo sapiens]
          Length = 256

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 46/188 (24%), Positives = 90/188 (47%), Gaps = 6/188 (3%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKL---LPTNTDIFGLKISNSLILDVKAEPID 118
           LG+L+      + K     +  LL  ++ K+   +P   +I  +K+++  +L++      
Sbjct: 65  LGILENLPLLDILKPGGGTSGGLLGGLLGKVTSVIPGLNNIIDIKVTDPQLLELGLVQSP 124

Query: 119 DGKGLNLSFPVTANVTVAGPIIG-QIINLKASLDLLTAVTIETDPQTHQPVAVLGECASD 177
           DG  L ++ P+   + V  P++G  ++ L   LD+   +    D Q    + VLG+C   
Sbjct: 125 DGHRLYVTIPLGIKLQVNTPLVGASLLRLAVKLDITAEILAVRDKQERIHL-VLGDCTHS 183

Query: 178 PTSISLSLLDKHSQI-INKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVV 236
           P S+ +SLLD    + I   ++S+   L   +  L+Q  +CPL+   +  LD+ ++  +V
Sbjct: 184 PGSLQISLLDGLGPLPIQGLLDSLTGILNKVLPELVQGNVCPLVNEVLRGLDITLVHDIV 243

Query: 237 DNPQHKTQ 244
           +   H  Q
Sbjct: 244 NMLIHGLQ 251


>gi|40807482 LPLUNC1 protein precursor [Homo sapiens]
          Length = 484

 Score = 57.8 bits (138), Expect = 9e-09
 Identities = 51/232 (21%), Positives = 99/232 (42%), Gaps = 18/232 (7%)

Query: 5   WKLVLLCGVLTGTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDNTLKGILEKLKVDLGV 64
           W   LLCG+L  T           L         VL  G + +   L   L+       +
Sbjct: 5   WTFTLLCGLLAAT-----------LIQATLSPTAVLILGPKVIKEKLTQELKDHNA-TSI 52

Query: 65  LQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGKGLN 124
           LQ+       ++K      +L ++++ +L     I  LK+  + IL ++ +P  + + L 
Sbjct: 53  LQQLPLLSAMREKPAGGIPVLGSLVNTVL---KHIIWLKVITANILQLQVKPSANDQELL 109

Query: 125 LSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPV-AVLGECASDPTSISL 183
           +  P+        P++  I+    + +     TI  D     P   VL +CA+   S+ +
Sbjct: 110 VKIPLDMVAGFNTPLVKTIVEFHMTTE--AQATIRMDTSASGPTRLVLSDCATSHGSLRI 167

Query: 184 SLLDKHSQIINKFVNSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQV 235
            LL K S ++N     V+N L  ++ +L++ ++CP+I    + +  +++Q V
Sbjct: 168 QLLHKLSFLVNALAKQVMNLLVPSLPNLVKNQLCPVIEASFNGMYADLLQLV 219


>gi|109627654 short long palate, lung and nasal epithelium carcinoma
           associated 3 isoform 1 [Homo sapiens]
          Length = 254

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 49/258 (18%), Positives = 110/258 (42%), Gaps = 51/258 (19%)

Query: 1   MLQLWKLVLLCGVLT-----------GTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDN 49
           M  LW+L++  G+L            G +++  DN       +   L  + H     + N
Sbjct: 2   MCPLWRLLIFLGLLALPLAPHKQPWPGLAQAHRDNKSTLARIIAQGL--IKHNAESRIQN 59

Query: 50  TLKGILEKLKVDLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISN--- 106
              G  ++L     V      W ++ +K Q+ ++   N+ +  L    D  G++IS    
Sbjct: 60  IHFG--DRLNASAQVAPGLVGWLISGRKHQQQQESSINITNIQL----DCGGIQISFHKE 113

Query: 107 ------SLILDVKAEPIDDGKGLNLSFPVTANVTVAGPIIGQIINLKASLDLLTAVTIET 160
                 SL  D++  P  D                       I+ + A + ++    +E 
Sbjct: 114 WFSANISLEFDLELRPSFDNN---------------------IVKMCAHMSIVVEFWLEK 152

Query: 161 DPQTHQPVAVLGECASDPTSISLSLLDKH-SQIINKFVNSVINTLKSTVSSLLQKEICPL 219
           D    + + V+G+C ++P+S+ +++L +     +N+F+ ++   L+  +  +++ ++CPL
Sbjct: 153 DEFGRRDL-VIGKCDAEPSSVHVAILTEAIPPKMNQFLYNLKENLQKVLPHMVESQVCPL 211

Query: 220 IRIFIHSLDVNVIQQVVD 237
           I   +  LDV +++ +++
Sbjct: 212 IGEILGQLDVKLLKSLIE 229


>gi|109627656 short long palate, lung and nasal epithelium carcinoma
           associated 3 isoform 2 [Homo sapiens]
          Length = 218

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 20/96 (20%), Positives = 57/96 (59%), Gaps = 2/96 (2%)

Query: 143 IINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKH-SQIINKFVNSVI 201
           I+ + A + ++    +E D    + + V+G+C ++P+S+ +++L +     +N+F+ ++ 
Sbjct: 99  IVKMCAHMSIVVEFWLEKDEFGRRDL-VIGKCDAEPSSVHVAILTEAIPPKMNQFLYNLK 157

Query: 202 NTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVVD 237
             L+  +  +++ ++CPLI   +  LDV +++ +++
Sbjct: 158 ENLQKVLPHMVESQVCPLIGEILGQLDVKLLKSLIE 193


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
           [Homo sapiens]
          Length = 1412

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 74  AKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK-GLNLSFPVTAN 132
           + ++ +EAE        +L  TN+ + G  + +S+    KAE    GK G ++  P T  
Sbjct: 87  SSEEEEEAEAETAKATPRLASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGK 146

Query: 133 VTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQ 191
            TVA  + G+     A     T +  ET+ +   P       A+ P  +S    D  S+
Sbjct: 147 -TVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAF---GAAAKPGMVSAGQADSSSE 201


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
           [Homo sapiens]
          Length = 1451

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 74  AKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK-GLNLSFPVTAN 132
           + ++ +EAE        +L  TN+ + G  + +S+    KAE    GK G ++  P T  
Sbjct: 87  SSEEEEEAEAETAKATPRLASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGK 146

Query: 133 VTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQ 191
            TVA  + G+     A     T +  ET+ +   P       A+ P  +S    D  S+
Sbjct: 147 -TVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAF---GAAAKPGMVSAGQADSSSE 201


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
           [Homo sapiens]
          Length = 1488

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 74  AKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK-GLNLSFPVTAN 132
           + ++ +EAE        +L  TN+ + G  + +S+    KAE    GK G ++  P T  
Sbjct: 87  SSEEEEEAEAETAKATPRLASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGK 146

Query: 133 VTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQ 191
            TVA  + G+     A     T +  ET+ +   P       A+ P  +S    D  S+
Sbjct: 147 -TVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAF---GAAAKPGMVSAGQADSSSE 201


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
           [Homo sapiens]
          Length = 1411

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 74  AKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK-GLNLSFPVTAN 132
           + ++ +EAE        +L  TN+ + G  + +S+    KAE    GK G ++  P T  
Sbjct: 87  SSEEEEEAEAETAKATPRLASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGK 146

Query: 133 VTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQ 191
            TVA  + G+     A     T +  ET+ +   P       A+ P  +S    D  S+
Sbjct: 147 -TVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAF---GAAAKPGMVSAGQADSSSE 201


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
           [Homo sapiens]
          Length = 1450

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 74  AKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK-GLNLSFPVTAN 132
           + ++ +EAE        +L  TN+ + G  + +S+    KAE    GK G ++  P T  
Sbjct: 87  SSEEEEEAEAETAKATPRLASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGK 146

Query: 133 VTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQ 191
            TVA  + G+     A     T +  ET+ +   P       A+ P  +S    D  S+
Sbjct: 147 -TVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAF---GAAAKPGMVSAGQADSSSE 201


>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
           [Homo sapiens]
          Length = 958

 Score = 33.1 bits (74), Expect = 0.23
 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 74  AKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK-GLNLSFPVTAN 132
           + ++ +EAE        +L  TN+ + G  + +S+    KAE    GK G ++  P T  
Sbjct: 87  SSEEEEEAEAETAKATPRLASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGK 146

Query: 133 VTVAGPIIGQIINLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQ 191
            TVA  + G+     A     T +  ET+ +   P       A+ P  +S    D  S+
Sbjct: 147 -TVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAF---GAAAKPGMVSAGQADSSSE 201


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 5/64 (7%)

Query: 48   DNTLKGILEKLKVDLGVLQKSSAW---QLAKQK--AQEAEKLLNNVISKLLPTNTDIFGL 102
            +  LK  LEKL+VDL    K + +   QL + K  A+E ++ ++ + SKL  T+ +   L
Sbjct: 1129 ETKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVSELTSKLKTTDEEFQSL 1188

Query: 103  KISN 106
            K S+
Sbjct: 1189 KSSH 1192


>gi|215599585 integrator complex subunit 12 [Homo sapiens]
          Length = 462

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEP 116
           LG L   S     K KA   E L   + S   P+  D+   KIS++  + +K EP
Sbjct: 17  LGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKISSTKNISIKQEP 71


>gi|21361851 integrator complex subunit 12 [Homo sapiens]
          Length = 462

 Score = 28.9 bits (63), Expect = 4.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEP 116
           LG L   S     K KA   E L   + S   P+  D+   KIS++  + +K EP
Sbjct: 17  LGFLHSKSKDSAEKLKALLDESLARGIDSSYRPSQKDVEPPKISSTKNISIKQEP 71


>gi|167900484 pentraxin 3 [Homo sapiens]
          Length = 381

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 44  LETVDNTLKGILEKLKVDLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTD 98
           L+  D+ L+G L++L+ +LG L +S A   A      AE  L + + +LL    D
Sbjct: 74  LQATDDVLRGELQRLREELGRLAESLARPCA--PGAPAEARLTSALDELLQATRD 126


>gi|157739942 gemin 5 [Homo sapiens]
          Length = 1508

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 6/53 (11%)

Query: 144  INLKASLDLLTAVTIETDPQTHQPVAVLGECASDPTSISLSLLDKHSQIINKF 196
            ++++ S  L TA T ETDP+T QP        + P+ + L L ++  ++++ F
Sbjct: 1310 LSVEPSQQLDTASTEETDPETSQPE------PNRPSELDLRLTEEGERMLSTF 1356


>gi|21071016 epidermal growth factor receptor pathway substrate
           8-like protein 3 isoform b [Homo sapiens]
          Length = 593

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK 121
           L VL  S  W L K +A  +  + +N++  L P      G   S   +L + + P +   
Sbjct: 477 LEVLDHSKRWWLVKNEAGRSGYIPSNILEPLQPGTPGTQGQSPSRVPMLRLSSRPEEVTD 536

Query: 122 GLNLSFPVTANVTVAGPIIG-QIINLK 147
            L      TA V   G + G Q++ ++
Sbjct: 537 WLQAENFSTATVRTLGSLTGSQLLRIR 563


>gi|21071018 epidermal growth factor receptor pathway substrate
           8-like protein 3 isoform a [Homo sapiens]
          Length = 594

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK 121
           L VL  S  W L K +A  +  + +N++  L P      G   S   +L + + P +   
Sbjct: 478 LEVLDHSKRWWLVKNEAGRSGYIPSNILEPLQPGTPGTQGQSPSRVPMLRLSSRPEEVTD 537

Query: 122 GLNLSFPVTANVTVAGPIIG-QIINLK 147
            L      TA V   G + G Q++ ++
Sbjct: 538 WLQAENFSTATVRTLGSLTGSQLLRIR 564


>gi|21071014 epidermal growth factor receptor pathway substrate
           8-like protein 3 isoform c [Homo sapiens]
          Length = 563

 Score = 28.5 bits (62), Expect = 5.7
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)

Query: 62  LGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKISNSLILDVKAEPIDDGK 121
           L VL  S  W L K +A  +  + +N++  L P      G   S   +L + + P +   
Sbjct: 447 LEVLDHSKRWWLVKNEAGRSGYIPSNILEPLQPGTPGTQGQSPSRVPMLRLSSRPEEVTD 506

Query: 122 GLNLSFPVTANVTVAGPIIG-QIINLK 147
            L      TA V   G + G Q++ ++
Sbjct: 507 WLQAENFSTATVRTLGSLTGSQLLRIR 533


>gi|54112390 calcium channel, voltage-dependent, alpha 2/delta
          subunit 1 [Homo sapiens]
          Length = 1091

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 9/86 (10%)

Query: 7  LVLLCGVLTGTSESLLDNLGNDLSNVVDKLEPVLHEGLETVDNTLKGILEKLKV-----D 61
          L L   +L G S          + + VDK++    E L T+  T  G+ + + +     D
Sbjct: 11 LTLFQSLLIGPSSEEPFPSAVTIKSWVDKMQ----EDLVTLAKTASGVNQLVDIYEKYQD 66

Query: 62 LGVLQKSSAWQLAKQKAQEAEKLLNN 87
          L  ++ ++A QL +  A++ EKLL+N
Sbjct: 67 LYTVEPNNARQLVEIAARDIEKLLSN 92


>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform 5
            [Homo sapiens]
          Length = 6907

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 47   VDNTLKGILEKLKVDLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLK--- 103
            + NT   +  K+K      +K+SA Q      Q  E LLN  ++K      +I+ LK   
Sbjct: 2931 IQNTCNEVEHKIKFCRQFHEKTSALQEEADSIQRNELLLNQEVNK--GVKEEIYNLKDRL 2988

Query: 104  --ISNSLILDVKAEPIDDGKGLNLSF 127
              I   ++  +K + + D  GLN  F
Sbjct: 2989 TAIKCCILQVLKLKKVFDYIGLNWDF 3014


>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform 1
            [Homo sapiens]
          Length = 6885

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 7/86 (8%)

Query: 47   VDNTLKGILEKLKVDLGVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLK--- 103
            + NT   +  K+K      +K+SA Q      Q  E LLN  ++K      +I+ LK   
Sbjct: 2931 IQNTCNEVEHKIKFCRQFHEKTSALQEEADSIQRNELLLNQEVNK--GVKEEIYNLKDRL 2988

Query: 104  --ISNSLILDVKAEPIDDGKGLNLSF 127
              I   ++  +K + + D  GLN  F
Sbjct: 2989 TAIKCCILQVLKLKKVFDYIGLNWDF 3014


>gi|21735584 oxysterol-binding protein-like protein 3 isoform d
           [Homo sapiens]
          Length = 820

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 14/24 (58%), Positives = 14/24 (58%)

Query: 22  LDNLGNDLSNVVDKLEPVLHEGLE 45
           LDNL NDL N    L PVL  G E
Sbjct: 417 LDNLSNDLDNERQTLGPVLDSGRE 440


>gi|21735582 oxysterol-binding protein-like protein 3 isoform c
           [Homo sapiens]
          Length = 851

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 14/24 (58%), Positives = 14/24 (58%)

Query: 22  LDNLGNDLSNVVDKLEPVLHEGLE 45
           LDNL NDL N    L PVL  G E
Sbjct: 448 LDNLSNDLDNERQTLGPVLDSGRE 471


>gi|21735580 oxysterol-binding protein-like protein 3 isoform b
           [Homo sapiens]
          Length = 856

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 14/24 (58%), Positives = 14/24 (58%)

Query: 22  LDNLGNDLSNVVDKLEPVLHEGLE 45
           LDNL NDL N    L PVL  G E
Sbjct: 453 LDNLSNDLDNERQTLGPVLDSGRE 476


>gi|14149704 oxysterol-binding protein-like protein 3 isoform a
           [Homo sapiens]
          Length = 887

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 14/24 (58%), Positives = 14/24 (58%)

Query: 22  LDNLGNDLSNVVDKLEPVLHEGLE 45
           LDNL NDL N    L PVL  G E
Sbjct: 484 LDNLSNDLDNERQTLGPVLDSGRE 507


>gi|54112429 dedicator of cytokinesis 7 [Homo sapiens]
          Length = 2109

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 198 NSVINTLKSTVSSLLQKEICPLIRIFIHSLDVNVIQQVVDNPQHKTQLQTL 248
           N++ N LKS++S+L   ++ P++R F+H L   +I  V+  P    Q+  L
Sbjct: 764 NNLENELKSSISALNSSQLEPVVR-FLHLLLDKLILLVIRPPVIAGQIVNL 813


>gi|98961156 tetratricopeptide repeat domain 23 [Homo sapiens]
          Length = 447

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 63  GVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKI 104
           G LQ       AKQ A++A ++L N I      NTD+F   I
Sbjct: 96  GYLQLKGLSLQAKQHAEKARQILANSIVPPYSENTDVFKFSI 137


>gi|98961154 tetratricopeptide repeat domain 23 [Homo sapiens]
          Length = 447

 Score = 27.7 bits (60), Expect = 9.7
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 63  GVLQKSSAWQLAKQKAQEAEKLLNNVISKLLPTNTDIFGLKI 104
           G LQ       AKQ A++A ++L N I      NTD+F   I
Sbjct: 96  GYLQLKGLSLQAKQHAEKARQILANSIVPPYSENTDVFKFSI 137


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.134    0.367 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,040,803
Number of Sequences: 37866
Number of extensions: 302154
Number of successful extensions: 1040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1001
Number of HSP's gapped (non-prelim): 39
length of query: 249
length of database: 18,247,518
effective HSP length: 100
effective length of query: 149
effective length of database: 14,460,918
effective search space: 2154676782
effective search space used: 2154676782
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.