Guide to the Human Genome
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Name: OSBPL3 Sequence: fasta or formatted (887aa) NCBI GI: 14149704
Description:

oxysterol-binding protein-like protein 3 isoform a

Referenced in:

Oxysterol-binding Protein Family

Other entries for this name:
alt prot [856aa] oxysterol-binding protein-like protein 3 isoform b
alt prot [851aa] oxysterol-binding protein-like protein 3 isoform c
alt prot [820aa] oxysterol-binding protein-like protein 3 isoform d
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         43           2
 C cysteine            1.9         17           1
 D aspartate           5.5         49           3
 E glutamate           8.2         73           2
 F phenylalanine       4.3         38           2
 G glycine             5.0         44           3
 H histidine           3.5         31           2
 I isoleucine          4.3         38           1
 K lysine              6.7         59           2
 L leucine             9.0         80           3
 M methionine          1.9         17           2
 N asparagine          4.6         41           2
 P proline             4.2         37           2
 Q glutamine           4.1         36           1
 R arginine            6.1         54           3
 S serine             12.7        113           3
 T threonine           3.3         29           2
 V valine              5.3         47           2
 W tryptophan          1.9         17           1
 Y tyrosine            2.7         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   oxysterol-binding protein-like protein 3 isoform a [... 
OSBPL3                0.956   oxysterol-binding protein-like protein 3 isoform b [...
OSBPL3                0.953   oxysterol-binding protein-like protein 3 isoform c [...
OSBPL3                0.908   oxysterol-binding protein-like protein 3 isoform d [...
OSBPL6                0.575   oxysterol-binding protein-like protein 6 isoform a [...
OSBPL6                0.567   oxysterol-binding protein-like protein 6 isoform b [...
OSBPL7                0.440   oxysterol-binding protein-like protein 7 
OSBPL1A               0.152   oxysterol-binding protein-like 1A isoform B 
OSBPL2                0.151   oxysterol-binding protein-like protein 2 isoform 2 [...
OSBP                  0.151   oxysterol binding protein 
OSBPL1A               0.150   oxysterol-binding protein-like 1A isoform A 
OSBPL2                0.148   oxysterol-binding protein-like protein 2 isoform 1 [H...
OSBP2                 0.136   oxysterol binding protein 2 isoform a 
OSBPL5                0.046   oxysterol-binding protein-like protein 5 isoform a [...
OSBPL5                0.046   oxysterol-binding protein-like protein 5 isoform b ...
OSBPL5                0.046   oxysterol-binding protein-like protein 5 isoform b [...
OSBPL8                0.037   oxysterol-binding protein-like protein 8 isoform b [...
OSBPL8                0.037   oxysterol-binding protein-like protein 8 isoform a [...
OSBPL9                0.037   oxysterol binding protein-like 9 isoform e 
OSBPL9                0.037   oxysterol binding protein-like 9 isoform f 
OSBPL9                0.037   oxysterol binding protein-like 9 isoform d 
OSBPL9                0.037   oxysterol binding protein-like 9 isoform c 
OSBPL9                0.037   oxysterol binding protein-like 9 isoform b 
OSBPL9                0.037   oxysterol binding protein-like 9 isoform a 
OSBPL9                0.037   oxysterol binding protein-like 9 isoform a 
OSBPL10               0.036   oxysterol-binding protein-like protein 10 
OSBPL11               0.028   oxysterol binding protein-like 11 
PLEKHH2               0.018   pleckstrin homology domain containing, family H (wi...
PLEKHH1               0.011   pleckstrin homology domain containing, family H (wit...
CCDC88A               0.011   coiled-coil domain containing 88A isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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